SHOW SNP NAMES

The Big Tree: R-ZZ12

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > ZZ12

In this block, there are two mutations and both are in the palindromic region. Z39893 is a difficult mutation to test. It does not show up well in BigY or FGC tests and the BAM file will probably need to be examined to confirm if someone is positive or not. As of today, 20160214, I don't know if all the blocks downstream of ZZ12 are positive for it. In particular, I still don't know the status of: A6387, FGC20195, ZZ41, L881, FGC23071, 19241222-T-C, DF79, Z2573 or BY3332. As well, most R-ZZ12* men have unknown status.

2016-11-20: A6387, BY3332 and ZZ41 look to be positive as well.

19736631-T-C
27417760-TTATATATATATATATATATATA-T
13829071-C-A
18804424-T-G
13720755-C-T
21628074-A-G
23250451-G-T
2717011-G-C
7323029-T-G
8093805-G-C
8552570-C-T
9424180-C-G
14263662-T-C
15090051-G-A
16557053-T-C
19066155-T-C
19465032-T-C
21294064-G-A
22549230-G-T
24491732-C-T
13676268-G-T
15255383-A-G
6397521-T-C
15393802-A-G
15811221-C-T
16506532-C-T
17389357-G-C
18764438-C-T
21093670-C-T
21880252-AAT-A
27339768-A-C
19736631-T-C
19069184-C-A
22340837-G-A
22297500-A-G
15017560-C-T
24347496-T-A
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24294293-T-C
19795564-T-C
21959479-C-T
24941761-C-T
25033302-A-G
8877803-T-A
28768492-C-A
19053029-G-A
16746347-G-T
22459727-C-T
15951374-T-C
7516077-G-C
7944876-T-A
24201890-T-A
24219248-T-G
13813060-C-T
22271525-C-T
7789148-C-T
8516818-A-G
8561837-T-C
16579799-A-C
17911406-G-C
21758584-G-T
21776205-G-A
23068974-A-G
13865302-A-C
16282817-G-T
24356240-A-G
8150211-C-T
13208999-G-A
13490869-C-G
17633385-T-C
6736486-G-A
2887959-C-A
6859374-C-T
7684990-C-T
13680261-G-C
14066324-C-T
14578379-T-G
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17842511-C-T
18085264-C-G
18093626-G-A
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19321822-A-G
21186889-G-A
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21528557-A-C
21736746-G-A
21902795-G-A
22024198-T-G
22127556-C-CT
22145814-T-C
23366148-G-T
[ N/A ]
7056154-C-T
7411183-C-T
7545321-G-T
7600028-C-A
7819500-A-G
13700048-T-A
13703520-C-T
14000836-G-A
15323142-C-T
15362416-T-C
16367553-A-G
16766590-G-A
18721283-G-A
19005294-G-A
21506291-G-A
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23384338-T-C
14002659-T-C
9850994-G-C
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8271542-T-C
7897284-A-G
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14175402-C-CA
14595532-C-T
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17760014-G-C
19008209-G-A
22120962-T-A
22131682-T-A
22256703-A-C
22891062-A-G
22943221-G-C
24431356-T-TA
14363874-A-T
21472518-T-A
21472516-AC-A
6716815-A-G
7680320-C-T
19317459-G-A
19365697-G-C
26594746-AT-A
[ N/A ]
8469661-G-A
8603396-A-G
3160109-C-A
17791873-G-T
21231954-A-G
3634944-C-A
24390413-G-T
23145767-G-T
6971660-G-T
7240140-A-G
21319218-A-T
23856099-T-C
2880901-A-G
6644450-A-G
8837592-C-T
8885300-T-C
9016724-T-C
13208767-T-C
14463681-C-T
15649156-G-A
15917958-A-G
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18781291-A-G
21465513-A-G
21479891-T-C
21546031-A-G
22074920-A-G
23162668-G-A
23482424-T-G
27335780-C-T
8050082-C-G
8050169-G-A
8191738-G-T
18632761-G-T
6879239-C-T
19086470-C-T
21985727-A-C
3251482-A-T
7230524-G-A
7292909-C-T
8461326-C-T
9963621-C-T
13816143-T-A
14104598-T-C
15714545-G-T
16291019-C-T
17843427-C-T
17853704-TAATAA-T
18713984-T-C
18883594-A-G
19272729-G-A
19397759-G-A
20834579-C-A
21424072-A-T
24470448-A-G
28507185-G-A
6736989-C-T
10050766-G-A
21542988-G-A
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16854891-A-C
9106731-C-G
9989614-C-T
17688235-G-C
19169514-T-C
21140610-G-A
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22246353-A-T
18073675-G-A
21754537-GAGAT-G
22998132-C-CT
22271713-G-A
7157817-C-T
6997021-GAATAAA-G
7823259-C-T
7853300-G-A
8571680-G-A
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14245311-A-T
14418677-G-A
14934108-T-C
17952851-C-T
18102978-G-T
19468709-A-G
21844581-T-C
22041101-C-T
23273705-G-A
9610575-A-C
17310829-G-A
19469883-C-G
22462118-G-T
14330762-C-G
21088970-TTC-T
14330827-T-TA
9054123-A-G
15436600-A-G
16037586-G-T
16962563-T-A
19162752-A-T
22723534-T-C
23245331-G-A
23637415-G-A
22192491-A-G
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21726127-C-T
22235801-A-G
2745595-G-A
2832366-T-C
3826362-A-G
4162707-C-T
4470495-T-C
4742889-T-C
5209502-T-C
5228775-G-A
5252663-C-G
5934869-G-A
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7981954-C-T
7983071-CTTGTT-C
8244776-C-G
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13224068-G-T
13530314-G-A
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14156436-A-G
14282350-C-G
14397551-T-C
15307194-G-A
15713341-C-A
17191736-G-A
17298851-A-C
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17890559-A-G
17928905-G-T
17959646-C-T
18867177-C-T
19042191-A-G
19179436-T-C
19263888-CAT-C
19279035-C-T
21606825-A-C
22008285-T-C
22093071-A-C
23138698-G-A
23213225-G-T
23759085-C-G
24474294-CA-C
28662055-C-G
28708440-T-C
21612424-T-C
16051979-G-A
28660482-G-A
6720047-T-C
7057071-C-A
7108031-C-T
7396772-A-G
7993670-A-C
8295076-C-T
8364144-G-A
9756374-C-T
14091573-C-G
14189688-T-C
14356707-C-T
15330471-A-T
15436684-T-C
15502391-T-C
15635586-A-G
15981415-T-G
17008473-A-G
18912827-T-C
19011609-C-A
19126855-C-T
19281708-A-G
20812147-C-T
21291075-A-T
22045372-G-C
22436955-G-C
22471754-C-T
22975149-C-A
9833149-C-T
7358456-A-C
7417470-T-C
8029775-C-T
8252689-T-C
8755921-A-G
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9056434-G-T
9491398-T-G
13717548-A-T
14202357-C-T
14335037-A-G
14590741-A-G
14854147-C-A
14862314-C-A
14944004-T-C
15330973-A-G
15782853-A-G
15783790-TA-T
16534181-G-T
17057154-T-C
18620159-C-A
19212706-A-C
19305485-G-A
19309601-G-A
21035650-A-C
22271484-G-T
22465599-A-C
23157030-C-T
27274981-G-A
28757675-C-T
28786425-G-C
8970840-A-G
14955689-A-G
15066441-A-C
15705827-C-T
17935024-C-A
19152003-C-T
21439064-T-A
21936970-G-A
23550033-AG-A
[ N/A ]
16408428-CAT-C
21392475-C-T
4837451-T-A
3917554-T-C
5796208-A-G
14364877-T-C
13572098-C-T
18956466-T-C
7783679-GA-G
13703461-G-A
16962513-T-C
22072239-C-T
7996095-C-T
9060789-T-C
21521235-A-C
21590365-G-A
15502554-G-C
15521903-T-C
15896819-A-T
18957086-C-T
21996048-A-T
22465191-C-T
6895013-C-T
8503835-T-G
13221044-G-A
14502821-T-G
15539301-A-G
15729874-A-G
16936563-T-A
17909243-C-G
17980184-G-A
21950684-A-G
22770546-C-A
24510977-CTTTT-C
25938121-C-T
2804501-A-G
7583357-C-T
8397151-C-T
9104041-G-A
9856234-T-C
14226166-G-T
14603962-G-T
15070226-A-G
15605964-G-A
15754087-C-T
15950953-T-C
16730774-T-C
17943068-G-A
18209331-A-T
18963056-T-A
19010903-G-A
21374102-T-A
21468974-A-T
22097476-A-G
22473579-T-C
22901108-C-T
7791641-C-G
23885324-C-T
22240042-C-T
8992312-T-C
2740865-GCTTT-G
15564015-G-A
17774448-A-G
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16743694-A-G
22317162-C-A
8698230-C-A
22003241-C-G
28778082-A-T
2859336-T-C
6349192-T-TG
6755221-CT-C
7066305-C-T
7245782-A-C
7536990-GCACTGGGTCA-G
7537001-G-A
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7978889-G-C
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21213351-C-T
21399225-A-C
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22445075-T-C
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22445302-T-C
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22487600-C-A
22906353-G-T
22915519-T-C
28590126-A-G
13599129-TATA-T
19002245-G-A
22443405-G-C
6657096-C-T
7751785-G-C
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8910089-T-C
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9146879-T-G
9146895-G-GGGAA
9146901-G-A
13655422-G-T
14143564-CAGG-C
14168736-A-G
15509731-A-T
15509734-C-A
15509735-T-A
16597563-G-A
16897466-A-C
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17342517-T-C
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21413492-G-A
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23496332-C-T
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21169662-C-A
22009066-G-T
22213976-C-A
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19515163-C-T
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6935076-C-G
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17322780-TGAAAA-T
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15470833-T-G
28787713-GA-G
7075132-T-C
14974845-C-G
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[ N/A ]
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8781790-C-A
9068452-C-T
13212098-A-T
14010587-CTG-C
14202505-G-A
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14936470-A-T
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21240411-T-C
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14143815-TG-T
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19180210-C-G
21560306-C-A
21763296-C-T
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22470348-A-G
23234407-C-T
23456359-T-G
Pikholz
201169
Spira
394364
Bachrach
268974
Reisch
133783
Royak
N93232
Persky
431305
Taubman
248611
Souroujon
191604
Esteves
253366
Fernandes
370301
Soares
458968
Ferrer
25139
Simoes
E2198
Melo
329413
Pool
91031
daSilva
B43396
Lorenzo
497926
Menchaca
420909
Salvador
426291
Portillo
329348
Herrera
19783
1k Genomes
NA12347
Belinho
N112890
Coats
136597
Sousa
559989
1k Genomes
HG01443
1k Genomes
HG01461
Garvey
4579
Moerker
B3275
Andress
518709
Biggs
482999
1k Genomes
HG01708
Charlap
335739
Hemmings
289314
Alligood
204729
Diaz
N11798
Roman
572540
Millet
438977
Burnett
101853
Boaz
N34129
Enos
425286 YF06139
Vargas
338832
Simas
B78337
Pimental
184215
1k Genomes
HG01170
Lopez
562850
Fialho
43381
Alexandre
520794 YF08383
Clark
110924
Boryczewski
B93546
1k Genomes
HG01389
1k Genomes
HG01709
1k Genomes
HG01694
Oliver
227823
Griffith
300605
Austin
95673
Adkins
308717
1k Genomes
HG01350
Avila
566209
Silveira
570365
1k Genomes
HG00731
1k Genomes
HG01048
1k Genomes
HG01176
Pinto
164690
Steiert
365483
Steiert
529519
Serna
325077 YF03618
Rios/Serna
262504 YF08895
Pena
314335
Fernandez
N143286 YF06668
1k Genomes
HG00742
Gulartie
181696
da Roza
281393
Brun
481836
Silva
536081
Feild
408388
Francisco
182832
1k Genomes
HG01771
Stockman
333436
Barnum
63407
Barnum
118801
Barnum
130968
Barnum
148467
Barnum
286626
Moffett
130439
Noble
235308
Cambon
500711
Cooley
126108
Cooley
319005
Cooley
559256
Lee
391179
1k Genomes
HG00739
1k Genomes
NA20770
Pettus
329341
1k Genomes
HG01917
1k Genomes
HG01247
Perry
108447
Pike
B4953
Garza
53663
de la Garza
590261
Campos
569851
Garza
434985
Nascimento
N38191
de Matos
298465
Alves
N124498
Jonsson
148259
Zelikovski
379038
Plant
436455 YF05854
Plant
453216 YF05858
Plant
11830 YF04268
Plant
96105 YF04270
Plant
182593 YF04839
Plantt
235642 YF04841
Gribben
N81812
1k Genomes
HG01606
Ortiz
N45914
1k Genomes
HG01121
Van Tuyl
222095
Sacco
101674
Alford
B5857
Castellanos
N113444
van Eessen
561279
Talbot
349890
1k Genomes
HG01395
1k Genomes
HG01506
Pardo
39078
Uriarte
259851
1k Genomes
HG02002
1k Genomes
HG01182
Barker
343710
Martins
N33837
Pacheco
397733
Correia
584889
Britton
349837
Hays
55051
Marques
589605
Corvelo
265888
Madeira
160764
Dinsmore
N88896
Densmore
N107249
Panizo
N15523
Say
456027
Pugh
261946
Bray
207548
Bell
N134387
Dale
270191
1k Genomes
HG01682
Gubbels
266579
Dauben
214921
Duswalt
234583
Pereira
B118423
1k Genomes
HG01775
Shuman
170585
Draper
342445
1k Genomes
HG00264
Lancaster
113701
Pattinson
278732
Treece
92432
Devall
211058
Faulkenberry
27169
Callister
284255
Steinsbo
235301
Sharp
355581
Brown
N41015
1k Genomes
HG01241
Torres
N112478
Pereira
168216
Mandeville
273775
Dick
30333
Galey
230275
Smith
287200
Crinklaw
N139161
Halsall
271001
Howland
26020
Halsell
42127
Colvin
492396
Stewart
528774
Baltar
482953
Douglass
107453
Robey
375913
Montgomery
122627
Bar
339624
Bare
391337
Gomes
333856
Young
479681
Butler
155150
Ryan
325245
Dwyer
N88747
Ryan
B8280
Smith
115560
Ryan
B79146
Ryan
349432
1k Genomes
HG01879
Foley
79047
Parsons
489156
Grant
152505
Cahoo
169776
Carroll
198624
Unknown
273017
Carew
305367
Cosgrove
B52811
Cosgrove
556125
Cosgrove
331268
Sheehy
B100083
Wilkinson
121153
Kennedy
59497 D8FCK
Condra
50661
Naughton
145027
Hankins
275327
Hoare
528445
Serrano
E15081
Thornton
189914
Thornton
B3822
Thornton
393715
1k Genomes
HG01615
Parker
308572
Vieweg
E17000
Jorgensen
286208
Rucker
44097
Rucker
404263
Rucker
144433
Rucker
46185
Rucker
49556
Rucker
57954
Bailie
144416
Swann
232152
Critchley
234371
1k Genomes
NA12812
Clark
294795
Ponder
133110
Peterson
470820
McReynolds
N50629
O'Neill
N103104
Williams
349715
O'Neill
139142
O'Neale
312665
Payne
55909
O'Neill
86442
1k Genomes
NA12814
Frappat
E11281
Gleason
421690
Gleason
101333
Gleason
292050
Walker
98943
Turner
248573
Kidd
N4591 L6CA8
Davis
392437
Davis
526424
Davis
99004
Parker
481086
Rice
4897
Kajnul
405948
Bartlett
227828
Zaldivar
149550
Silveira
303289 YF06077
Engle
277935 JGJ3G
1k Genomes
HG01789
Feitzinger
339787 BAZ9V
Bowker
90959
Cwiklik
558723
Heningham
B3153
Wright
340326
Wright
226144
Courtney
293467
Garibay
N132496
Miller
15364
Beasley
205694
Gillispie
59598
Jewett
45214 C0YTG
Jewett
269073 JL3W2
Hall
264962
Whiteside
84538
Soard
265020
Whiteside
275500
Bedford
70453
Bedford
K4UVH
Hancock
249693
Hebert
128757
Ramsdale
174024
Moon
182732
Carter
416771
Persson
330933
Westermark
416295
Hedman
367358
Smithson
223803
Robertshaw
273347
Turner
N3036 GYBGZ
Dickinson
134765 WBAFF
Wilson
92933
Moore
B76932
McCauley
342681 FASY9
McCauley
421619 6CXZ7
McCauley
382774
McAuley
N18197 4DTEX
McCauley
115452
McCauley
496137 N9F63
MacAuley
549990
McCaulley
365749
McCawley
B47510
Robertson
204779
Mitchell
476439
O'Connell
271969
Dodds
B37367
1k Genomes
HG00107
Hickey
66501
Simpson
B24208
Hickey
535659
King
10479
1k Genomes
HG01577
1k Genomes
NA19762
Palmer
370005
Haynes
N129767
Escobar
313425
Heleno
580362
Serra
N123269
Scholz
E8202
Unknown
571593
1k Genomes
HG01063
Dolim
396854
1k Genomes
HG01085
Hawkins
440147
Grimmett
356645
Grimmett
435467
Grimmett
257213
Grimmitt
406144
Grimmett
231966
Grimmett
406529
1k Genomes
HG01341
Cornejo
349527
Cornejo
451932
Vierra
106164 YF06079
Pinheiro
N127213
Rodrigues
388013
1k Genomes
HG01705
DeSouza
481005
1k Genomes
HG01353
1k Genomes
HG01413
Graber
12728
Morris
277146 HV2Y5
Morris
364759
1k Genomes
HG01783
Crump
N8921
1k Genomes
HG01491
Sánchez
193923
Staines
294098
1k Genomes
HG01518
Lefebure
481082
Wilson
207754
Peretti
272633
Lindsay
16262
Burns
305674
O'Beirne
264624
Morris
248088
Moreno
331655
McCaw
393079
Pratt
450229
Hall
388659 YF03957
Wix
521178
Guedry
390285
Barrow
393401
Sullivan
283800
1k Genomes
HG01398
1k Genomes
HG01785
Leppard
42069
Coontz
N2197
Haynes
445554

Overlay STR Data for an STR:


Porter
N28007
Oakes
H2290
Williamson
196041
A red background is used for men whose data has not yet been fully analyzed. His position on the tree is not yet final, and will in general be downstream of the current position. He may not be positive for all the SNPs/INDELs in the block he descends from.

Men whose NGS data have been fully analyzed are indicated with a grey background color.

Those men with a grey background and a pink bar to their left have been finalized, but haven't gone through as much scrutinity as earlier kits have. In particular, no search has been made for recurrent SNPs or other unusual mutations. For the vast majority of kits, this has no effect at all, but I will review them as necessary in the future.

19503820-T-C
FGC5577?
A green SNP name with a '?' indicates that the SNP's status for the block is uncertain, but assumed to be positive. The same SNP probably occurs in an upstream block. It will be necessary to check BAM files or perhaps Sanger sequence some men to prove the result.

CTS4296
22233413-G-A
Mutations written with a red background fall within a region of the Y chromosome, such as the palindromic region, which has left the position of the mutation ambiguous. The true mutation may be at the indicated position, or at any one of a number of alternate positions.