Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > DF21/S192 > S5488 > Z16294 > BY11121 > Z16281 > Z16282 > Z16291 > Z16284 > Z18012 > 7693315-C-T > b38:7304091-G-A

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
6781
BigY2
6781
6402169-T-C 6534128-T-C A*
13451316-C-T 11295640-C-T A*
13694974-A-G 11539298-A-G A*
28817568-C-A 26671421-C-A A*
22237529-G-C 20075643-G-C DYZ19 A*
20041960-G-T 17930080-G-T P5_Prx A*
6104668-C-T 6236627-C-T ++
21407770-G-A 19245884-G-A YY+
13237435-G-C 11081759-G-C +
14062700-T-C 11941994-T-C YY++
6102717-G-T 6234676-G-T ++
21715913-T-C 19554027-T-C YY++
13957834-G-T 11837128-G-T **
13957835-T-G 11837129-T-G **
14021526-C-A 11900820-C-A **
13880837-C-A 11760131-C-A **
13957905-G-T 11837199-G-T **
56849000-G-T **
14031838-A-T 11911132-A-T **
14093612-T-G 11972906-T-G **
14119137-T-C 11998431-T-C **
13858293-T-G 11737587-T-G **
14200512-A-G 12079806-A-G **
14240501-C-A 12119795-C-A **
14272797-C-A 12152091-C-A **
14289494-A-C 12168788-A-C **
14298007-T-A 12177301-T-A **
14300112-C-A 12179406-C-A **
13872332-C-A 11751626-C-A **
13803399-A-T 11682693-A-T **
13858020-G-C 11737314-G-C **
13610935-G-T 11455259-G-T **
13228911-C-A 11073235-C-A **
13258711-C-A 11103035-C-A **
13266940-G-T 11111264-G-T **
13326314-C-A 11170638-C-A **
13405111-G-T 11249435-G-T **
13484526-C-T 11328850-C-T **
13503972-C-A 11348296-C-A **
13542269-G-T 11386593-G-T **
13594797-C-T 11439121-C-T **
13705497-A-T 11549821-A-T A12738 **
13857597-A-G 11736891-A-G **
13705523-A-G 11549847-A-G **
11645664-A-G **
11648149-C-A **
11648888-T-A **
11651321-G-T **
11664015-G-T **
11664020-G-A **
13798603-C-A 11677897-C-A **
13809317-A-G 11688611-A-G **
14343862-T-C 12223157-T-C **
14465377-T-C 12344650-T-C **
14354460-C-A 12233755-C-A **
15468601-C-A 13356721-C-A **
15358594-T-A 13246713-T-A **
15364016-C-G 13252136-C-G **
15403640-C-A 13291760-C-A **
15420219-C-A 13308339-C-A **
15435158-T-C 13323278-T-C **
15435166-T-C 13323286-T-C **
15435168-C-T 13323288-C-T **
15435172-A-G 13323292-A-G **
15445124-A-G 13333244-A-G **
15541732-C-A 13429852-C-A **
15279348-G-T 13167447-G-T **
15599228-C-A 13487348-C-A **
15616651-C-A 13504771-C-A **
15661007-C-A 13549127-C-A **
15686757-C-A 13574877-C-A **
15686796-T-G 13574916-T-G **
15686799-A-T 13574919-A-T **
15712322-A-C 13600442-A-C **
15712351-T-A 13600471-T-A **
15712353-T-A 13600473-T-A **
15712357-G-A 13600477-G-A **
15305724-G-A 13193823-G-A **
15220906-T-C 13108992-T-C **
14448402-C-A 12327675-C-A **
14688688-C-A 12576754-C-A **
13212564-C-A 11056888-C-A **
14467605-T-TA 12346874-T-TA 10×A**
14586173-G-T 12474373-G-T **
14596149-C-A 12484349-C-A **
14605765-C-A 12493967-C-A **
14608109-C-A 12496311-C-A **
14680664-G-T 12568730-G-T **
14688652-A-G 12576718-A-G **
14688655-A-T 12576721-A-T **
14688664-C-T 12576730-C-T **
14691677-C-T 12579743-C-T **
15176970-C-A 13065056-C-A **
14721634-G-T 12609702-G-T **
14736124-C-A 12624192-C-A **
14761266-G-A 12649335-G-A **
14764292-T-C 12652361-T-C **
14779631-C-T 12667701-C-T **
14799805-G-A 12687876-G-A **
15038321-C-A 12926411-C-A **
15045660-C-G 12933750-C-G **
15066428-C-A 12954519-C-A **
15113666-C-A 13001753-C-A **
13224737-C-A 11069061-C-A **
11010329-C-A **
11031401-C-A **
10790456-C-G **
10749234-C-A **
10752277-T-G **
10761890-C-A **
10769215-C-A **
10770331-C-G **
10770378-C-T **
10771207-AT-A **
10772071-C-G **
10784690-A-T **
10808045-C-A **
10683358-C-A **
10808070-C-A **
10808082-C-A **
10808090-C-T **
10808095-CGATTT-C **
10808105-A-C **
10808108-T-C **
10820676-C-T **
10820681-C-T **
10825452-T-C **
10684554-A-G **
10676766-G-T **
10826956-T-A **
10012872-C-A 10175263-C-A **
9426750-C-A 9589141-C-A **
9689277-T-TC 9851668-T-TC IR3_Prx **
9810951-A-G 9973342-A-G **
9887775-T-A 10050166-T-A **
9932646-G-T 10095037-G-T **
9936367-C-A 10098758-C-A **
9937671-G-A 10100062-G-A **
9942316-C-T 10104707-C-T **
9962353-A-T 10124744-A-T **
10018154-C-A 10180545-C-A **
10670930-C-A **
10617704-T-C **
10632568-T-C **
10632575-CATGCCATCCA-C **
10652282-TGTC-T **
10652288-C-T **
10652295-A-G **
10652303-T-C **
10652311-T-C **
10665831-C-A **
10667904-AACTCC-A **
10825585-G-T **
10826962-TCCATG-T **
11023059-C-A **
10965397-T-A **
10956280-G-A **
10960839-C-A **
10962647-C-G **
10964672-A-G **
10965342-T-TACCTC **
10965385-A-C **
10965388-G-T **
10965394-C-T **
10965396-T-A **
10968506-C-A **
10956244-C-A **
10973766-C-A **
10976108-T-G **
10979056-T-C **
10987138-A-T **
11006932-A-T **
11009943-C-T **
11010223-ACATTC-A **
15733870-A-C 13621990-A-C **
11012161-C-A **
11022744-C-A **
10956264-C-T **
10953376-C-A **
10826971-TTGCAC-T **
10848736-C-T **
10833227-CATGAA-C **
10833244-A-C **
10833249-C-T **
10833253-C-A **
10833322-C-A **
10848516-C-G **
10848565-T-G **
10848652-C-T **
10848734-C-T **
10858541-T-C **
10931148-CTCCAT-C **
10877665-C-A **
10877672-C-T **
10877862-C-A **
10878841-C-A **
10882389-C-A **
10893869-T-C **
10894016-C-A **
10895955-C-A **
10896520-A-C **
10903727-C-T **
15731089-G-T 13619209-G-T **
16002402-C-A 13890522-C-A **
15735263-C-A 13623383-C-A **
22059114-G-T 19897228-G-T **
21625324-C-A 19463438-C-A **
21658602-T-C 19496716-T-C **
21694837-C-A 19532951-C-A **
21703106-C-A 19541220-C-A **
21709275-C-A 19547389-C-A **
21737836-G-A 19575950-G-A **
21775265-A-T 19613379-A-T **
21880858-C-T 19718972-C-T **
21946451-C-A 19784565-C-A **
22101002-CAAAAAAAA-C 19939116-CAAAAAAAA-C 27×A**
21514175-G-C 19352289-G-C **
22152197-G-T 19990311-G-T **
22520552-G-A 20358666-G-A **
22593722-T-A 20431836-T-A **
22615426-C-A 20453540-C-A **
22662372-G-T 20500486-G-T **
22662517-G-T 20500631-G-T **
22766612-C-A 20604726-C-A **
22804091-C-A 20642205-C-A **
22841951-C-A 20680065-C-A **
21589649-A-G 19427763-A-G **
21468094-C-A 19306208-C-A **
23041105-G-A 20879219-G-A **
21056392-G-A 18894506-G-A **
19871839-G-T 17759959-G-T P5_Prx **
20027910-C-A 17916030-C-A P5_Prx **
20231514-A-AGAAAGAAT 18069628-A-AGAAAGAAT P5_Dst **
20404438-T-C 18242552-T-C P5_Dst **
20434758-G-A 18272872-G-A P5_Dst **
20434796-A-T 18272910-A-T P5_Dst **
20655002-AT-A 18493116-AT-A P4_Prx **
20775133-A-AT 18613247-A-AT P4_Prx **
20829723-AG-A 18667837-AG-A P4_Gap **
21060667-C-A 18898781-C-A **
21457190-C-A 19295304-C-A **
21088771-C-A 18926885-C-A **
21096196-G-A 18934310-G-A **
21208971-AGAGC-A 19047085-AGAGC-A **
21220866-C-A 19058980-C-A **
21368333-C-T 19206447-C-T **
21369468-C-A 19207582-C-A **
21427791-C-T 19265905-C-T **
21444602-A-G 19282716-A-G **
21455335-C-A 19293449-C-A **
23036825-G-A 20874939-G-A **
23041147-G-C 20879261-G-C **
19847671-T-TC 17735791-T-TC P5_Prx **
28670535-G-T 26524388-G-T **
26167804-G-T 24021657-G-T P1_Y1 **
27762810-C-T 25616663-C-T P1_Y2 **
27937853-A-G 25791706-A-G P1_Y2 **
28030916-G-T 25884769-G-T P1_Y2 **
28532879-C-A 26386732-C-A **
28539762-T-A 26393615-T-A **
28551034-G-T 26404887-G-T **
28589359-C-A 26443212-C-A **
28605893-C-A 26459746-C-A **
28676519-C-A 26530372-C-A **
26167726-A-ATG 24021579-A-ATG P1_Y1 **
28679108-C-A 26532961-C-A **
28698113-A-G 26551966-A-G **
28729404-T-C 26583257-T-C **
28731907-A-G 26585760-A-G **
28731950-G-T 26585803-G-T **
28798008-G-C 26651861-G-C **
56839133-C-T **
56840391-C-T **
56848529-G-T **
26167754-G-T 24021607-G-T P1_Y1 **
25567336-A-AC 23421189-A-AC P1_gr1 **
23056249-G-T 20894363-G-T **
23801707-T-G 21639821-T-G **
23059644-C-A 20897758-C-A **
23181440-T-C 21019554-T-C **
23181451-T-C 21019565-T-C **
23190079-G-T 21028193-G-T **
23277412-C-T 21115526-C-T **
23285493-A-T 21123607-A-T **
23317684-TTTG-T 21155798-TTTG-T **
23341037-C-A 21179151-C-A **
23475470-G-A 21313584-G-A **
23801731-CTCAA-C 21639845-CTCAA-C **
25524746-C-T 23378599-C-T P1_gr1 **
23825101-T-C 21663215-T-C **
23825102-C-T 21663216-C-T **
24241067-G-A 22094920-G-A P3_b1 **
24258798-A-G 22112651-A-G P3_b1 **
24267226-CACA-C 22121079-CACA-C P3_b1 **
24290749-G-GCACA 22144602-G-GCACA P3_t1 20×CA**
24296350-A-AC 22150203-A-AC P3_t1 **
24424266-C-A 22278119-C-A **
24518632-C-T 22372485-C-T **
19847677-TG-T 17735797-TG-T P5_Prx **
19786525-G-C 17674645-G-C P5_Prx **
15832319-C-A 13720439-C-A **
17074636-C-A 14962756-C-A **
16703732-G-T 14591852-G-T **
16738120-C-T 14626240-C-T **
16750115-T-C 14638235-T-C **
16790993-C-A 14679113-C-A **
16904647-G-A 14792767-G-A **
16904658-TGTC-T 14792778-TGTC-T **
16904663-CCAA-C 14792783-CCAA-C **
17030875-C-T 14918995-C-T **
17055922-T-A 14944042-T-A **
17096164-C-A 14984284-C-A **
16654825-A-C 14542945-A-C **
17100466-T-C 14988586-T-C **
17100468-T-A 14988588-T-A **
17176483-T-C 15064603-T-C **
17178681-C-A 15066801-C-A **
17199546-A-AT 15087666-A-AT 9×T**
17213926-G-T 15102046-G-T **
17258061-G-T 15146181-G-T **
17284638-C-A 15172758-C-A **
17306798-C-A 15194918-C-A **
16673063-C-A 14561183-C-A **
16598961-G-T 14487081-G-T **
17374619-G-T 15262739-G-T **
16215434-G-T 14103554-G-T **
15899045-T-C 13787165-T-C **
15969754-C-A 13857874-C-A **
15987390-C-A 13875510-C-A **
9171197-C-A 9333588-C-A **
16002911-T-C 13891031-T-C **
16020690-A-G 13908810-A-G **
16038961-T-G 13927081-T-G **
16073005-C-A 13961125-C-A **
16177224-T-G 14065344-T-G **
16216729-C-A 14104849-C-A **
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16274198-T-C 14162318-T-C **
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16279484-C-A 14167604-C-A **
16305919-CGT-C 14194039-CGT-C **
16341120-A-G 14229240-A-G **
16487983-A-C 14376103-A-C **
16506746-G-T 14394866-G-T **
16506763-T-C 14394883-T-C **
17355699-TA-T 15243819-TA-T **
17504817-C-T 15392937-C-T **
19677904-A-ACACC 17566024-A-ACACC P5_Prx **
19198153-C-A 17086273-C-A **
18929895-C-A 16818015-C-A **
18933885-T-A 16822005-T-A **
18951202-C-A 16839322-C-A **
18965956-C-A 16854076-C-A **
18987101-C-A 16875221-C-A **
19071815-C-A 16959935-C-A **
19075383-G-A 16963503-G-A **
19099065-G-A 16987185-G-A **
19132516-A-C 17020636-A-C **
19206704-A-C 17094824-A-C **
18902559-G-T 16790679-G-T **
19248900-C-G 17137020-C-G **
19449299-A-G 17337419-A-G **
19464007-T-C 17352127-T-C **
19464016-A-C 17352136-A-C **
19464019-A-C 17352139-A-C **
19527863-C-A 17415983-C-A **
19530402-A-T 17418522-A-T **
19532497-C-A 17420617-C-A **
19592053-T-G 17480173-T-G P5_Prx **
18915228-A-G 16803348-A-G **
18792755-C-A 16680875-C-A **
17550767-C-A 15438887-C-A **
18088481-A-G 15976601-A-G **
17627717-G-A 15515837-G-A **
17649723-C-A 15537843-C-A **
17713878-G-A 15601998-G-A **
17740111-A-T 15628231-A-T **
17741292-C-T 15629412-C-T **
17804518-C-A 15692638-C-A **
17883797-A-G 15771917-A-G **
18059839-C-A 15947959-C-A **
18071968-T-A 15960088-T-A **
18166107-T-C 16054227-T-C **
18737608-C-A 16625728-C-A **
18190741-G-T 16078861-G-T **
18215819-C-A 16103939-C-A **
18253222-C-A 16141342-C-A **
18343625-T-G 16231745-T-G P6_Prx **
18389325-C-T 16277445-C-T P6_Gap **
18454720-C-A 16342840-C-A P6_Dst **
18549353-G-A 16437473-G-A **
18549405-T-C 16437525-T-C **
18622432-C-A 16510552-C-A **
18709735-C-A 16597855-C-A **
9364701-C-A 9527092-C-A **
10652278-A-ATCACT **
9034360-C-A 9196751-C-A **
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2738749-C-A 2870708-C-A **
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2783583-TGA-T 2915542-TGA-T **
2833289-T-C 2965248-T-C **
2833292-G-A 2965251-G-A **
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8253628-C-A 8385587-C-A **
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2892660-T-C 3024619-T-C **
2940335-C-A 3072294-C-A **
2994506-T-G 3126465-T-G **
2994519-T-G 3126478-T-G **
2994551-T-C 3126510-T-C **
3047622-T-A 3179581-T-A **
6967803-C-A 7099762-C-A **
6915844-A-C 7047803-A-C **
3222883-G-T 3354842-G-T **
4510039-C-A 4641998-C-A **
2833290-G-C 2965249-G-C **
8181289-G-A 8313248-G-A **
8181296-C-A 8313255-C-A **
8181299-C-A 8313258-C-A **
13941032-C-A 11820326-C-A **
17159052-T-C 15047172-T-C **
18242715-C-A 16130835-C-A **
28522376-CT-C 26376229-CT-C 18×T**
10808071-A-C **
6177606-C-T 6309565-C-T IR3_Dst **
17994848-T-A 15882968-T-A P7_Prx **
8981062-C-A 9143453-C-A **
3262206-T-C 3394165-T-C **
23045954-C-A 20884068-C-A **
10833079-A-C **
3101202-A-T 3233161-A-T **
3252903-T-G 3384862-T-G **
10833214-A-T **
4070048-T-C 4202007-T-C **
4045926-C-A 4177885-C-A **
4045934-T-G 4177893-T-G **
13143083-A-C 10632569-A-C **
4045953-T-G 4177912-T-G **
4045966-A-G 4177925-A-G **
4069545-A-T 4201504-A-T **
4083280-T-C 4215239-T-C **
4045902-T-A 4177861-T-A **
4138467-G-T 4270426-G-T **
4172855-G-T 4304814-G-T **
4207018-T-C 4338977-T-C **
4282570-T-A 4414529-T-A 17×AC**
4326405-C-A 4458364-C-A **
4388672-G-T 4520631-G-T **
14562321-C-A 12450522-C-A 42×T**
4045914-T-A 4177873-T-A **
3916778-A-T 4048737-A-T **
3284586-T-C 3416545-T-C **
3629325-G-A 3761284-G-A **
3332053-T-C 3464012-T-C **
3347007-A-C 3478966-A-C **
3355556-G-T 3487515-G-T **
3359304-G-T 3491263-G-T **
3367841-G-T 3499800-G-T **
3509301-A-T 3641260-A-T **
3559529-G-A 3691488-G-A **
3629446-A-T 3761405-A-T **
3804776-A-C 3936735-A-C **
3629459-A-C 3761418-A-C **
3350514-C-CA 3482473-C-CA 15×A**
3658359-G-T 3790318-G-T **
3669035-G-T 3800994-G-T **
3670014-G-C 3801973-G-C **
3688492-C-A 3820451-C-A **
3733571-G-T 3865530-G-T **
13199225-C-A 11043549-C-A **
19000196-C-A 16888316-C-A **
7009187-CTTTTTTT-C 7141146-CTTTTTTT-C 19×T**
11036037-T-A **
3804732-CAAAAAAAA-C 3936691-CAAAAAAAA-C 29×A**
11038008-C-A **
16654826-C-A 14542946-C-A **
3804780-G-T 3936739-G-T **
11036034-A-G **
17994844-T-A 15882964-T-A P7_Prx **
11036061-A-T **
24244621-G-T 22098474-G-T P3_b1 **
11036067-C-A **
11036079-C-T **
5263565-C-A 5395524-C-A **
10857579-A-T **
24259831-A-AC 22113684-A-AC P3_b1 **
11020935-C-A **
10965338-C-A **
20434805-G-A 18272919-G-A P5_Dst **
15364015-C-G 13252135-C-G **
7418609-G-T 7550568-G-T **
10754762-C-A **
18244625-C-A 16132745-C-A **
13217146-C-A 11061470-C-A **
21256016-C-A 19094130-C-A **
23317696-G-T 21155810-G-T **
10754749-C-T **
10754752-T-G **
9916747-A-C 10079138-A-C **
26075709-G-A 23929562-G-A P1_Y1 **
14235871-GA-G 12115165-GA-G 10×A**
6267697-A-AG 6399656-A-AG IR3_Dst **
23825046-TTA-T 21663160-TTA-T 9×TA**
28700474-C-A 26554327-C-A **
15686809-A-G 13574929-A-G **
20331990-T-A 18170104-T-A P5_Dst **
7081344-G-T 7213303-G-T **
10960841-C-CTCCAT **
11004382-C-T **
15857612-C-T 13745732-C-T CTS4840 **
5937661-CCACA-C 6069620-CCACA-C 15×CA**
10865835-C-T **
10865847-C-T **
7832222-C-T 7964181-C-T **
5976902-C-A 6108861-C-A **
10925498-C-CACTG **
5199689-A-C 5331648-A-C FGC29261 **
3732952-CT-C 3864911-CT-C 14×T**
13530079-CAAA-C 11374403-CAAA-C 24×A**
13625194-C-A 11469518-C-A **
8181341-A-G 8313300-A-G A3725 **
6177611-C-T 6309570-C-T IR3_Dst **
6177607-A-G 6309566-A-G IR3_Dst **
24634101-C-A 22487954-C-A P3_t2 **
16090475-C-A 13978595-C-A **
10965349-G-A **
7432346-C-A 7564305-C-A **
10877810-T-C **
23983491-G-T 21837344-G-T **
15823987-T-G 13712107-T-G **
10877824-A-G **
16930738-G-T 14818858-G-T **
14605160-C-A 12493362-C-A **
10688986-G-A **
25333892-GA-G 23187745-GA-G P2_r1 **
28532681-A-T 26386534-A-T **
16506750-G-A 14394870-G-A **
56847913-C-A **
4419957-G-T 4551916-G-T **
19510291-TG-T 17398411-TG-T **
16876981-C-A 14765101-C-A **
10844251-T-C **
10865827-C-T **
11026299-A-C **
15857699-G-A 13745819-G-A CTS4843 **
7199216-C-A 7331175-C-A **
4444833-T-C 4576792-T-C **
4400636-C-A 4532595-C-A **
20404427-C-A 18242541-C-A P5_Dst **
7340257-C-A 7472216-C-A **
7317126-C-A 7449085-C-A **
7318546-G-T 7450505-G-T **
7319083-T-C 7451042-T-C **
7321965-C-A 7453924-C-A **
7331327-C-A 7463286-C-A **
3550572-CTCA-C 3682531-CTCA-C **
7341545-T-C 7473504-T-C **
7258582-C-A 7390541-C-A **
7363360-A-T 7495319-A-T **
7370049-G-T 7502008-G-T **
7401096-C-A 7533055-C-A **
7409744-C-CA 7541703-C-CA **
7409758-T-G 7541717-T-G **
7409760-T-C 7541719-T-C **
7306308-C-A 7438267-C-A **
7237263-GAA-G 7369222-GAA-G 11×A**
17897990-C-A 15786110-C-A **
7038440-C-A 7170399-C-A **
6825593-T-C 6957552-T-C **
6847949-C-G 6979908-C-G **
6847961-T-A 6979920-T-A **
6915856-A-G 7047815-A-G **
4527851-T-C 4659810-T-C **
6999054-G-T 7131013-G-T **
7050298-T-C 7182257-T-C **
7223517-C-A 7355476-C-A **
7107141-C-A 7239100-C-A **
7152642-G-A 7284601-G-A **
7162499-C-A 7294458-C-A **
7185576-G-A 7317535-G-A **
13530110-C-A 11374434-C-A **
7216643-C-G 7348602-C-G **
7418614-T-G 7550573-T-G **
7420838-T-G 7552797-T-G **
6793580-C-A 6925539-C-A **
8385249-G-T 8517208-G-T **
8181344-C-G 8313303-C-G **
8181353-G-A 8313312-G-A **
8181353-GCC-G 8313312-GCC-G **
8181358-G-A 8313317-G-A **
8181360-T-TA 8313319-T-TA **
8274076-G-T 8406035-G-T **
8660250-C-A 8792209-C-A **
8181322-A-T 8313281-A-T **
8676987-C-A 8808946-C-A **
8713121-C-A 8845080-C-A **
8776679-G-T 8908638-G-T **
8850067-C-A 8982026-C-A **
9118054-C-A **
9118093-A-T **
8181340-C-T 8313299-C-T **
8181321-G-A 8313280-G-A **
19351505-G-A 17239625-G-A **
8001997-G-C 8133956-G-C **
7422171-C-A 7554130-C-A **
7433890-C-A 7565849-C-A **
7670705-C-A 7802664-C-A **
7709493-T-G 7841452-T-G **
7753549-T-A 7885508-T-A **
7969123-T-G 8101082-T-G **
8109837-G-T 8241796-G-T **
8181281-C-T 8313240-C-T **
8172759-C-T 8304718-C-T **
8181258-G-C 8313217-G-C **
8181259-G-A 8313218-G-A **
8181266-G-A 8313225-G-A **
8181269-C-A 8313228-C-A **
8181271-C-T 8313230-C-T **
6825406-C-A 6957365-C-A **
6948215-A-T 7080174-A-T **
6792435-C-A 6924394-C-A **
5455794-C-A 5587753-C-A **
5241173-T-TTTCC 5373132-T-TTTCC **
17994839-G-A 15882959-G-A P7_Prx **
5323847-G-T 5455806-G-T **
5396016-C-A 5527975-C-A **
17994830-G-A 15882950-G-A P7_Prx **
5426509-C-A 5558468-C-A **
5524667-A-T 5656626-A-T **
23181445-T-A 21019559-T-A **
15363994-A-G 13252114-A-G **
5527065-G-T 5659024-G-T **
5547700-G-A 5679659-G-A **
5626004-C-A 5757963-C-A **
5628537-G-T 5760496-G-T **
5628546-G-T 5760505-G-T **
17994841-G-A 15882961-G-A P7_Prx **
5235191-G-T 5367150-G-T **
5683088-G-C 5815047-G-C **
4883654-A-G 5015613-A-G **
4571247-T-C 4703206-T-C **
4571253-T-C 4703212-T-C **
4616659-C-A 4748618-C-A **
4698164-A-G 4830123-A-G **
4748828-C-A 4880787-C-A **
4877858-G-A 5009817-G-A **
4883668-C-A 5015627-C-A **
5210191-T-A 5342150-T-A **
4889392-A-G 5021351-A-G **
4973658-G-A 5105617-G-A **
4973661-T-C 5105620-T-C **
4973721-G-T 5105680-G-T **
5107361-C-A 5239320-C-A **
5163867-G-T 5295826-G-T **
5188675-A-G 5320634-A-G **
15336018-T-A 13224136-T-A **
20778783-G-GTGTT 18616897-G-GTGTT P4_Prx **
8181277-G-C 8313236-G-C **
6642865-A-T 6774824-A-T **
6432163-A-G 6564122-A-G **
6465673-C-A 6597632-C-A **
59004551-AAAAG-A 56858404-AAAAG-A 5×AAAG**
6510826-C-A 6642785-C-A **
6541291-T-A 6673250-T-A **
6625302-T-G 6757261-T-G **
6642870-T-A 6774829-T-A **
6347748-AG-A 6479707-AG-A **
6698955-C-T 6830914-C-T **
6748760-C-A 6880719-C-A **
6751454-G-T 6883413-G-T **
6757676-C-A 6889635-C-A **
6771437-C-A 6903396-C-A **
10031051-G-A 10193442-G-A Z16174 **
6791196-C-A 6923155-C-A **
6347752-AGG-A 6479711-AGG-A **
6439574-AG-A 6571533-AG-A **
6295545-C-T 6427504-C-T IR3_Dst **
5937644-A-AG 6069603-A-AG **
5720744-A-G 5852703-A-G **
5866477-TC-T 5998436-TC-T **
5877238-C-A 6009197-C-A **
6295538-T-C 6427497-T-C IR3_Dst **
5933861-C-A 6065820-C-A **
5931041-C-A 6063000-C-A **
5949372-C-A 6081331-C-A 8×A**
6295506-T-G 6427465-T-G IR3_Dst **
6090381-T-C 6222340-T-C **
6096947-A-AT 6228906-A-AT **
22363762-G-C 20201876-G-C DYZ19 ***
15752638-C-CCTTCTTCTT,T 13640758-C-CCTTCTTCTT,T 25×CTT***
13723409-A-G 11567733-A-G ***
13676191-T-G 11520515-T-G ***
22422826-C-A 20260940-C-A DYZ19 ***
13714025-T-C 11558349-T-C ***
18354164-T-G 16242284-T-G P6_Prx 13×AGAA***
13477221-G-A 11321545-G-A ***
13459171-C-A 11303495-C-A ***
13676186-T-A 11520510-T-A ***
13727938-T-A 11572262-T-A ***
22207383-C-A 20045497-C-A ***
15592539-C-A 13480659-C-A ***
19966700-G-GA 17854820-G-GA P5_Prx ***
13138472-C-T 10627958-C-T ***
21318477-C-A 19156591-C-A 19×A***
13140232-A-G 10629718-A-G ***
13449037-C-T 11293361-C-T ***
13868631-G-A 11747925-G-A ***
10024014-C-G 10186405-C-G ***
24244599-TC-T 22098452-TC-T P3_b1 ***
13809723-CGAATATAAAGGAATT-C 11689017-CGAATATAAAGGAATT-C ***
13453618-A-AATTCCATTCC 11297942-A-AATTCCATTCC 12×ATTCC***
28807064-G-A 26660917-G-A ***
20998328-AG-A 18836442-AG-A P4_Dst ***
13860136-G-A 11739430-G-A ***
13717391-G-GCATGGAATGT 11561715-G-GCATGGAATGT ***
13710091-A-T 11554415-A-T ***
28722458-T-A 26576311-T-A ***
13710087-T-C 11554411-T-C ***
23832207-T-C 21670321-T-C ***
13810153-C-T 11689447-C-T ***
13669528-AATGGAATGGT-A 11513852-AATGGAATGGT-A ***
56835863-CCGTGC-C,CCATGT ***
56835939-C-A ***
56839057-C-A ***
28808617-G-GTGGAA 26662470-G-GTGGAA 5×TGGAA***
58973138-C-G 56826991-C-G ***
56847372-G-T ***
13302078-CA-C 11146402-CA-C ***
56848549-G-T ***
26834597-GAC-G 24688450-GAC-G P1_g2 ***
22420181-C-T 20258295-C-T DYZ19 ***
23316245-C-A 21154359-C-A ***
58973144-G-C 56826997-G-C ***
25280367-CTT-C 23134220-CTT-C P2_r1 26×T***
13457716-G-GATTCCATTCC 11302040-G-GATTCCATTCC 12×ATTCC***
23419627-G-A 21257741-G-A ***
23434510-C-A 21272624-C-A ***
13676733-A-G 11521057-A-G ***
23552738-C-CA 21390852-C-CA 9×A***
13297873-T-A 11142197-T-A FGC41993 ***
8403272-C-CA 8535231-C-CA 28×A***
13813534-A-T 11692828-A-T ***
27791947-T-G 25645800-T-G P1_Y2 ***
28790608-GTGGAA-G 26644461-GTGGAA-G 4×TGGAA***
13483970-A-T 11328294-A-T ***
13483957-G-A 11328281-G-A ***
13680888-A-C 11525212-A-C ***
13714026-C-A 11558350-C-A ***
22432849-T-A 20270963-T-A DYZ19 ***
58819368-C-T 56771503-G-A ***
16115519-ATT-A 14003639-ATT-A P8_Prx 22×T***
25819473-T-TA 23673326-T-TA P1_b3 11×A***
13139583-T-C 10629069-T-C A4936 ***
22427059-C-A 20265173-C-A DYZ19 ***
15743985-T-A 13632105-T-A ***
22452063-A-T 20290177-A-T DYZ19 ***
5127279-T-C 5259238-T-C ***
5644725-C-A 5776684-C-A ***
13453648-C-T 11297972-C-T ***
13579686-C-A 11424010-C-A ***
13671405-C-A 11515729-C-A ***
13705517-A-T 11549841-A-T A12739 ***
13705519-T-C 11549843-T-C A12740 ***
4470076-C-A 4602035-C-A ***
6509798-C-A 6641757-C-A ***
14071398-G-T 11950692-G-T ***
14557546-TA-T 12445747-TA-T ***
3640682-CTCCTTCCT-C,CTCCT 3772641-CTCCTTCCT-C,CTCCT 14×TCCT***
8703020-TACAC-T 8834979-TACAC-T 11×AC***
15865549-CTTTTT-C 13753669-CTTTTT-C 22×T***
10971230-C-A ***
13215844-ATTTTT-A 11060168-ATTTTT-A 16×T***
10935994-C-T ***
16437576-A-G 14325696-A-G ***
10785581-C-A ***
8760517-CTTTTTTTTT-C,CTTTTTTT 8892476-CTTTTTTTTT-C,CTTTTTTT 20×T***
9942088-A-C 10104479-A-C ***
10019609-C-T 10182000-C-T ***
13138477-A-C 10627963-A-C ***
10754856-C-T ***
10777457-TC-T ***
10786410-C-A ***
10924387-C-A ***
10787557-C-A,T ***
10799474-T-C ***
7371800-C-A 7503759-C-A ***
10824216-G-T ***
10845640-C-A ***
10901386-C-A ***
10916087-G-T ***
16045054-AT-A,ATT 13933174-AT-A,ATT 13×T***
9420138-ATATTAT-A,ATAT 9582529-ATATTAT-A,ATAT 14×TAT***
22452065-G-T 20290179-G-T DYZ19 ***
28204105-C-T 26057958-C-T P1_b4 ***
21138761-AG-A 18976875-AG-A 8×G***
21262338-C-A 19100452-C-A ***
16057664-A-T 13945784-A-T ***
58978459-T-C 56832312-T-C ***
58973871-T-A,G 56827724-T-A,G ***
28787605-G-A 26641458-G-A ***
26834792-GAAAT-G 24688645-GAAAT-G P1_g2 ***
18109357-T-A 15997477-T-A ***
26060168-C-CAA 23914021-C-CAA P1_Y1 39×A***
25845074-GT-G 23698927-GT-G P1_b3 24×T***
25100235-A-G 22954088-A-G g1 ***
24998720-A-C 22852573-A-C g1 ***
24212621-G-A 22066474-G-A P3_b1 ***
24192237-CA-C 22046090-CA-C P3_b1 22×A***
13453840-C-CTCCAT 11298164-C-CTCCAT 10×TCCAT***
13859965-G-T 11739259-G-T ***
16577498-C-A 14465618-C-A ***
18191264-C-A 16079384-C-A ***
17584161-C-G 15472281-C-G ***
8385578-G-T 8517537-G-T ***
16852791-CTT-C 14740911-CTT-C 10×T***
6807750-G-T 6939709-G-T ***
18723887-CTTTTTT-C 16612007-CTTTTTT-C 19×T***
17466431-G-T 15354551-G-T ***
18615958-TTG-T 16504078-TTG-T ***
14765702-C-A 12653771-C-A ***
18615982-C-A 16504102-C-A ***
18646297-C-A 16534417-C-A ***
7256093-GAAAA-G 7388052-GAAAA-G 18×A***
6359639-C-T 6491598-C-T ***
19206739-GGTAA-G,GG 17094859-GGTAA-G,GG ***
18923342-G-GTT 16811462-G-GTT 18×T***
16003866-C-A 13891986-C-A ***
13139231-AACCCT-A 10628717-AACCCT-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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