Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > ZZ12 > ZZ19 > Z34609 > Z2571 > FGC11380 > FGC11388 > FGC11414 > FGC11407

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
GYBGZ
6896704-C-G 7028663-C-G FGC11402 YY+
16210601-C-G 14098721-C-G FGC11406 Y+
18060231-C-T 15948351-C-T FGC11410 YY+
17930321-C-T 15818441-C-T FGC11409 Y+
17605521-T-C 15493641-T-C FGC11408 YY+
8491779-C-T 8623738-C-T FGC11403 YY+
15635682-A-C 13523802-A-C FGC11405 YY+
21709352-G-C 19547466-G-C FGC11412 YY+
22440900-T-G 20279014-T-G FGC11415 DYZ19 *
23091536-G-A 20929650-G-A FGC11417 YY*
5828966-AACACACAC-A 5960925-AACACACAC-A 22×AC**
13515516-T-C 11359840-T-C **
22438020-A-T 20276134-A-T DYZ19 **
3640987-TTTTCCTTTCCTTTCC-T 3772946-TTTTCCTTTCCTTTCC-T 11×TTTCC**
2984843-T-A 3116802-T-A **
2984844-T-A 3116803-T-A **
14625798-TG-T 12514066-GG-T **
27461323-A-G 25315176-A-G P1_Y2 **
13805487-G-A 11684781-G-A FGC44465 **
5886046-A-T 6018005-A-T 4×ATTT**
28749603-A-C 26603456-A-C **
23241947-C-CTTTTTT 21080061-C-CTTTTTT 27×T**
13372165-A-C 11216489-A-C **
13221465-A-C 11065789-A-C **
13256143-C-T 11100467-C-T **
13221521-C-T 11065845-C-T **
27614362-C-A 25468215-C-A P1_Y2 ***
25990620-T-G 23844473-T-G P1_Y1 ***
25990618-C-G 23844471-C-G P1_Y1 ***
27614333-C-A 25468186-C-A P1_Y2 ***
24491126-A-G 22344979-A-G ***
27614336-T-A 25468189-T-A P1_Y2 ***
27614337-C-A 25468190-C-A P1_Y2 ***
24415762-A-T 22269615-A-T ***
27461760-T-A 25315613-T-A P1_Y2 ***
24415756-A-T 22269609-A-T ***
26252690-A-T 24106543-A-T P1_Y1 ***
24415748-A-T 22269601-A-T ***
24374452-T-A 22228305-T-A ***
24254165-A-G 22108018-A-G P3_b1 ***
24254161-C-T 22108014-C-T P3_b1 ***
27814350-G-A 25668203-G-A P1_Y2 ***
24254155-C-G 22108008-C-G P3_b1 ***
24254143-G-A 22107996-G-A P3_b1 10×AC***
24134494-C-A 21988347-C-A P3_b1 ***
27814352-T-A 25668205-T-A P1_Y2 ***
25990632-G-T 23844485-G-T P1_Y1 ***
27614332-T-A 25468185-T-A P1_Y2 ***
27415905-T-A 25269758-T-A P1_g3 ***
27162020-T-A 25015873-T-A P1_g3 18×A***
27415895-G-C 25269748-G-C P1_g3 ***
27415893-T-A 25269746-T-A P1_g3 ***
27415891-G-A 25269744-G-A P1_g3 ***
27415889-A-T 25269742-A-T P1_g3 ***
27415878-T-A 25269731-T-A P1_g3 ***
27339358-C-T 25193211-C-T P1_g3 ***
27560207-C-A 25414060-C-A P1_Y2 ***
27321017-C-T 25174870-C-T P1_g3 ***
27321015-C-T 25174868-C-T P1_g3 ***
27321005-G-T 25174858-G-T P1_g3 ***
27130165-A-T 24984018-A-T P1_g3 ***
27614321-G-T 25468174-G-T P1_Y2 ***
27130161-A-G 24984014-A-G P1_g3 ***
27130157-T-A 24984010-T-A P1_g3 ***
27560209-G-A 25414062-G-A P1_Y2 ***
27056070-T-A 24909923-T-A P1_r4 ***
27035479-C-T 24889332-C-T P1_r4 ***
26501077-G-A 24354930-G-A P1_Y1 ***
26391354-T-A 24245207-T-A P1_Y1 ***
26391325-T-G 24245178-T-G P1_Y1 ***
26325005-C-T 24178858-C-T P1_Y1 ***
27560212-C-G 25414065-C-G P1_Y2 ***
26252693-C-T 24106546-C-T P1_Y1 ***
13477371-G-C 11321695-G-C ***
22504365-T-C 20342479-T-C DYZ19 ***
23713761-T-G 21551875-T-G ***
22292698-G-T 20130812-G-T DYZ19 ***
22438780-T-G 20276894-T-G DYZ19 ***
22438754-T-A 20276868-T-A DYZ19 ***
22359796-A-G 20197910-A-G DYZ19 ***
22344289-G-T 20182403-G-T DYZ19 ***
22344237-A-T 20182351-A-T DYZ19 ***
22343907-C-A 20182021-C-A DYZ19 ***
22338190-A-T 20176304-A-T DYZ19 ***
22335201-G-T 20173315-G-T DYZ19 ***
22335198-A-C 20173312-A-C DYZ19 ***
22309346-G-A 20147460-G-A DYZ19 ***
22308616-G-T 20146730-G-T DYZ19 ***
22292772-G-T 20130886-G-T DYZ19 ***
22289747-C-A 20127861-C-A DYZ19 ***
22438873-A-G 20276987-A-G DYZ19 ***
22273552-T-A 20111666-T-A DYZ19 ***
22250531-G-A 20088645-G-A DYZ19 ***
22250504-T-A 20088618-T-A DYZ19 ***
22250259-C-A 20088373-C-A DYZ19 ***
22235085-C-A 20073199-C-A DYZ19 ***
22235079-C-A 20073193-C-A DYZ19 ***
22235075-G-T 20073189-G-T DYZ19 ***
22235063-C-G 20073177-C-G DYZ19 ***
22225959-G-T 20064073-G-T DYZ19 ***
22225954-G-A 20064068-G-A DYZ19 ***
21537619-G-T 19375733-G-T ***
21208962-G-A 19047076-G-A ***
22438791-C-T 20276905-C-T DYZ19 ***
22438913-T-A 20277027-T-A DYZ19 ***
22635579-T-A 20473693-T-A ***
22440676-G-A 20278790-G-A DYZ19 ***
22635578-T-A 20473692-T-A ***
22504369-G-T 20342483-G-T DYZ19 ***
27814354-T-A 25668207-T-A P1_Y2 ***
22499854-G-A 20337968-G-A DYZ19 ***
22498433-G-A 20336547-G-A DYZ19 ***
22495933-T-A 20334047-T-A DYZ19 ***
22491437-T-C 20329551-T-C DYZ19 ***
22491392-C-G 20329506-C-G DYZ19 ***
22491031-T-G 20329145-T-G DYZ19 ***
22440740-C-A 20278854-C-A DYZ19 ***
22440719-C-T 20278833-C-T BY15810 DYZ19 ***
22440718-C-A 20278832-C-A DYZ19 ***
22440638-T-G 20278752-T-G DYZ19 ***
22438954-A-G 20277068-A-G DYZ19 ***
22440621-G-T 20278735-G-T DYZ19 ***
22440497-T-G 20278611-T-G A4268 DYZ19 ***
22439865-T-A 20277979-T-A DYZ19 ***
22439818-T-C 20277932-T-C DYZ19 ***
22439801-A-G 20277915-A-G DYZ19 ***
22439601-A-G 20277715-A-G DYZ19 ***
22439588-G-T 20277702-G-T DYZ19 ***
22439179-G-T 20277293-G-T A6011 BY6801 DYZ19 ***
22439020-T-A 20277134-T-A DYZ19 ***
22438999-C-T 20277113-C-T DYZ19 ***
22438997-T-A 20277111-T-A DYZ19 ***
22438989-C-T 20277103-C-T DYZ19 ***
27814353-T-A 25668206-T-A P1_Y2 ***
27832761-G-T 25686614-G-T P1_Y2 ***
27814355-C-A 25668208-C-A P1_Y2 ***
13700757-T-TGGAAA 11545081-T-TGGAAA ***
18735674-C-CTTTTT 16623794-C-CTTTTT 24×T***
18612766-T-TATATACACACACACAC 16500886-T-TATATACACACACACAC ***
18612759-G-GTA 16500879-G-GTA 15×TA***
17604931-G-GTTTTTTT 15493051-G-GTTTTTTT 24×T***
17332750-CAAAAAA-C 15220870-CAAAAAA-C 22×A***
16205796-CTTTTTTTTTTT-C 14093916-CTTTTTTTTTTT-C 21×T***
15940331-G-AAA 13828451-G-AAA ***
15842559-T-TTC 13730679-T-TTC ***
15321328-GTT-G 13209446-GTT-G 25×T***
15018939-G-GTTTTT 12907028-G-GTTTTT 15×T***
14429405-TTATA-T 12308680-TTA-T 15×TA***
13728570-GA-TG 11572894-GA-TG ***
13700736-AGTAGAATAAATACT-A 11545060-AGTAGAATAAATACT-A ***
19775302-C-CTTTTT 17663422-C-CTTTTT P5_Prx 32×T***
13488843-TG-CC 11333167-TG-CC ***
13486802-A-AC 11331126-A-AC ***
13480021-TCTG-CCTA 11324345-TCTG-CCTA ***
13477362-TCCT-CCCG 11321686-TCCT-CCCG ***
13203963-TGG-CGGT 11048287-TGG-CGGT ***
13203922-CGGC-TGGT 11048246-CGGC-TGGT ***
13110331-ATTG-CTCA 10599817-ATTG-CTCA ***
10034819-TGGACTCCT-GGGACGCCG 10197210-TGGACTCCT-GGGACGCCG ***
8452192-C-AA 8584151-C-AA 15×A***
7418073-C-CAA 7550032-C-CAA 22×A***
7107011-C-CTATA 7238970-C-CTATA 20×TA***
6089764-G-GTTTTTTT 6221723-G-GTTTTTTT 31×T***
5653225-TA-T 5785184-TA-T 10×A***
19346433-C-TCTTT 17234553-C-TCTTT 15×CTTT***
19937284-G-GCCC 17825404-G-GCCC P5_Prx 13×C***
5590714-G-GA 5722673-G-GA 10×A***
23197360-CAAAAA-C 21035474-CAAAAA-C 17×A***
58870534-TTTCCA-ATTCGT 56720332-TGGAAA-ACGAAT ***
58858959-CTCTATC-TTCCATT 56731906-GATAGAG-AATGGAA ***
58843791-TTTTGAA-ATTTGAT 56747074-TTCAAAA-ATCAAAT ***
58840663-ATGAAT-A 56750201-GAATTC-G ***
28798940-TAT-GAA 26652793-TAT-GAA ***
28721499-C-CAAAA 26575352-C-CAAAA 18×A***
28461722-C-CTTTT 26315575-C-CTTTT 19×T***
27714328-CTTTT-C 25568181-CTTTT-C P1_Y2 15×T***
27130157-TGCCAATGA-AGCCGATGT 24984010-TGCCAATGA-AGCCGATGT P1_g3 ***
24388085-T-TAG 22241938-T-TAG ***
23505158-C-CA 21343272-C-CA 20×A***
23199746-A-ACCCCCCC 21037860-A-ACCCCCCC 11×C***
22481631-AG-TA 20319745-AG-TA DYZ19 ***
20025478-T-TCCCCCCCCCC 17913598-T-TCCCCCCCCCC P5_Prx ***
22440762-TTTAAAA-CTTAGAG 20278876-TTTAAAA-CTTAGAG DYZ19 ***
22440731-AA-GC 20278845-AA-GC DYZ19 ***
22440716-CCCC-TAAT 20278830-CCCC-TAAT DYZ19 ***
22440606-GCTCCAGTCA-TCTGCGGACC 20278720-GCTCCAGTCA-TCTGCGGACC DYZ19 ***
22439914-TTTAAC-GTTACA 20278028-TTTAAC-GTTACA DYZ19 ***
22438771-GT-AG 20276885-GT-AG DYZ19 ***
22438762-AG-A 20276876-AG-A DYZ19 ***
22352888-AC-GT 20191002-AC-GT DYZ19 ***
22308615-AG-GT 20146729-AG-GT DYZ19 ***
22232331-TA-CG 20070445-TA-CG DYZ19 ***
21146275-CTT-C 18984389-CTT-C 17×T***
21096458-C-CAAAAAAA 18934572-C-CAAAAAAA 16×A***
20989156-TAT-CAC 18827270-TAT-CAC P4_Dst ***
5593309-CAA-C 5725268-CAA-C 15×A***
5574077-CTT-C 5706036-CTT-C 19×T***
27814363-A-T 25668216-A-T P1_Y2 ***
28491517-A-T 26345370-A-T ***
58849214-T-C 56741657-A-G ***
58848550-G-C 56742321-C-G ***
58848518-A-C 56742353-T-G ***
58846200-T-A 56744671-A-T ***
58843780-G-C 56747091-C-G ***
58843762-T-C 56747109-A-G ***
58843754-C-A 56747117-G-T ***
58841128-T-A 56749743-A-T ***
58838488-C-G 56752383-G-C ***
58833207-T-C 56757664-A-G ***
58833191-A-T 56757680-T-A ***
58830984-A-T 56759887-T-A ***
28491404-C-A 26345257-C-A ***
58854402-C-T 56736469-G-A ***
28491283-G-A 26345136-G-A ***
28236506-C-T 26090359-C-T P1_b4 ***
27998523-A-T 25852376-A-T P1_Y2 ***
27998521-C-A 25852374-C-A P1_Y2 ***
27998518-A-T 25852371-A-T P1_Y2 ***
27832770-A-C 25686623-A-C P1_Y2 ***
27832768-A-T 25686621-A-T P1_Y2 ***
27832762-A-C 25686615-A-C P1_Y2 ***
20685719-G-A 18523833-G-A P4_Prx ***
27832760-A-T 25686613-A-T P1_Y2 ***
27832759-A-T 25686612-A-T P1_Y2 ***
27832757-G-C 25686610-G-C P1_Y2 ***
27832755-G-T 25686608-G-T P1_Y2 ***
58852114-G-T 56738757-C-A ***
58854403-C-G 56736468-G-C ***
5354747-CACAT-TACAC 5486706-CACAT-TACAC ***
58912672-C-T 56678199-G-A ***
3550569-CAACTC-AAA 3682528-CAACTC-AAA ***
3148420-CTTTT-C 3280379-CTTTT-C 18×T***
2984843-TT-AA 3116802-TT-AA ***
3889019-C-CT 4020978-C-CT 15×T***
4503511-AT-A 4635470-AT-A 14×T***
21054379-CA-C 18892493-CA-C 18×A***
23025229-C-CAA 20863343-C-CAA 29×A***
9735605-G-GTT 9897996-G-GTT IR3_Prx 30×T***
5055675-C-CA 5187634-C-CA 12×A***
10013371-TG-CT 10175762-TG-CT ***
58995130-TG-CA 56848983-TG-CA ***
58914442-C-G 56676429-G-C ***
58910961-T-A 56679910-A-T ***
58856591-C-A 56734280-G-T ***
58903726-C-T 56687145-G-A ***
58883262-G-T 56707609-C-A ***
58877106-A-T 56713765-T-A ***
58875030-A-C 56715841-T-G ***
58870720-G-C 56720151-C-G ***
58870288-T-A 56720583-A-T ***
58868303-C-A 56722568-G-T ***
58865732-G-C 56725139-C-G ***
58865728-G-T 56725143-C-A ***
58865705-T-A 56725166-A-T ***
58865700-T-G 56725171-A-C ***
58859563-T-G 56731308-A-C ***
58859561-G-C 56731310-C-G ***
20989158-T-C 18827272-T-C P4_Dst ***
20666115-A-T 18504229-A-T P4_Prx ***
20685713-C-T 18523827-C-T P4_Prx ***
22440551-T-G 20278665-T-G DYZ19 ***
3070633-A-G 3202592-A-G ***
22292727-G-A 20130841-G-A DYZ19 ***
25626758-G-A 23480611-G-A P1_b3 ***
58880563-G-C 56710308-C-G ***
26190539-C-T 24044392-C-T P1_Y1 ***
22344309-G-C 20182423-G-C DYZ19 ***
13480460-C-A 11324784-C-A ***
13110087-A-T 10599573-A-T ***
22292722-G-T 20130836-G-T DYZ19 ***
23713770-G-A 21551884-G-A ***
58996130-G-A 56849983-G-A ***
13472916-T-C 11317240-T-C ***
22439153-A-T 20277267-A-T Z7895 DYZ19 ***
3902543-A-T 4034502-A-T ***
22440615-A-C 20278729-A-C DYZ19 ***
22440717-C-A 20278831-C-A DYZ19 ***
58995123-A-G 56848976-A-G ***
13728585-G-A 11572909-G-A ***
59007959-C-CAAAAAAAA 56861812-C-CAAAAAAAA 26×A***
22504362-G-T 20342476-G-T DYZ19 ***
13472906-A-C 11317230-A-C ***
13472933-A-T 11317257-A-T ***
22250480-A-G 20088594-A-G DYZ19 ***
13109944-T-A 10599430-T-A ***
22250493-G-T 20088607-G-T DYZ19 ***
9040207-AT-A 9202598-AT-A 16×T***
3902541-A-T 4034500-A-T ***
4820845-G-C 4952804-G-C ***
10090513-C-T 10252904-C-T ***
10084421-A-T 10246812-A-T ***
13109888-A-G 10599374-A-G ***
10091218-C-T 10253609-C-T ***
10090676-T-A 10253067-T-A ***
10090672-T-A 10253063-T-A ***
10090458-A-T 10252849-A-T ***
10090445-G-T 10252836-G-T ***
10090442-T-A 10252833-T-A ***
10090440-A-G 10252831-A-G ***
10084476-T-A 10246867-T-A ***
10084466-G-A 10246857-G-A ***
10084462-A-G 10246853-A-G ***
10084453-G-T 10246844-G-T ***
10030730-C-A 10193121-C-A ***
5434069-C-T 5566028-C-T ***
9704387-T-A 9866778-T-A IR3_Prx ***
9590422-G-T 9752813-G-T IR3_Prx ***
9590416-C-T 9752807-C-T IR3_Prx ***
9590415-G-T 9752806-G-T IR3_Prx ***
9429259-T-C 9591650-T-C ***
9368488-T-C 9530879-T-C ***
9353653-T-A 9516044-T-A ***
8293606-C-A 8425565-C-A ***
7939421-C-T 8071380-C-T ***
7873981-T-A 8005940-T-A ***
6725397-T-C 6857356-T-C ***
6577523-A-T 6709482-A-T ***
13460165-GTG-TTC 11304489-GTG-TTC ***
13203955-CATCATT-GATGATA 11048279-CATCATT-GATGATA ***
13109921-T-C 10599407-T-C ***
20531503-T-C 18369617-T-C P5_Dst ***
58848817-T-G 56742054-A-C ***
58848796-T-A 56742075-A-T ***
58848788-G-T 56742083-C-A ***
20541524-A-G 18379638-A-G P5_Dst ***
13483953-T-G 11328277-T-G ***
58913236-G-T 56677635-C-A ***
58895199-C-A 56695672-G-T ***
22496058-T-A 20334172-T-A DYZ19 ***
13728302-C-A 11572626-C-A ***
58877107-T-C 56713764-A-G ***
58869760-C-G 56721111-G-C ***
23825066-T-A 21663180-T-A ***
20531502-A-T 18369616-A-T P5_Dst ***
15794218-C-CA 13682338-C-CA 14×A***
20531449-A-G 18369563-A-G P5_Dst ***
19656733-A-T 17544853-A-T P5_Prx ***
19127669-C-T 17015789-C-T ***
13728292-G-A 11572616-G-A ***
13109961-T-G 10599447-T-G ***
58870737-A-T 56720134-T-A ***
13728301-T-A 11572625-T-A ***
25268596-G-A 23122449-G-A P2_r1 ***
22496172-T-A 20334286-T-A DYZ19 ***
22361234-C-A 20199348-C-A DYZ19 ***
24278286-C-A 22132139-C-A P3_b1 8×AG***
22440308-T-G 20278422-T-G FGC8621Z17584 DYZ19 ***
58848818-T-A 56742053-A-T ***
13120420-A-T 10609906-A-T ***
13515526-T-C 11359850-T-C ***
9956269-CATC-AATT 10118660-CATC-AATT ***
13110115-T-A 10599601-T-A ***
22504467-T-G 20342581-T-G DYZ19 ***
22256945-A-G 20095059-A-G DYZ19 ***
59007432-C-CTTTATT 56861285-C-CTTTATT 18×T***
22439187-C-T 20277301-C-T DYZ19 ***
26391353-AT-TAA 24245206-AT-TAA P1_Y1 ***
3411996-TTGTGTGTGTGTGTG-T 3543955-TTGTGTGTGTGTGTG-T 23×TG***
25990634-G-T 23844487-G-T P1_Y1 23×T***
9301402-TA-AG 9463793-TA-AG ***
28356602-A-T 26210455-A-T P1_gr2 ***
19610119-C-T 17498239-C-T P5_Prx ***
13460172-G-T 11304496-G-T ***
22300958-G-C 20139072-G-C DYZ19 ***
13120428-C-T 10609914-C-T ***
58836048-C-T 56754823-G-A ***
22491371-G-T 20329485-G-T DYZ19 ***
58914422-C-CCATTG 56676444-G-GAATGC ***
58839784-G-T 56751087-C-A ***
13109923-C-T 10599409-C-T ***
13109899-G-T 10599385-G-T ***
7146301-CAAAA-C 7278260-CAAAA-C 17×A***
58865808-A-C 56725063-T-G ***
22252915-T-G 20091029-T-G DYZ19 ***
22503533-A-G 20341647-A-G DYZ19 ***
10090493-A-G 10252884-A-G ***
24381403-T-AA 22235256-T-AA ***
13120469-C-G 10609955-C-G ***
13109914-A-G 10599400-A-G ***
13109945-A-T 10599431-A-T ***
20666136-A-C 18504250-A-C P4_Prx ***
19176484-T-C 17064604-T-C ***
20389769-C-A 18227883-C-A P5_Dst ***
20333863-G-A 18171977-G-A P5_Dst ***
20300908-C-T 18139022-C-T P5_Dst ***
20300888-G-A 18139002-G-A P5_Dst ***
20300875-T-A 18138989-T-A P5_Dst ***
20300872-A-T 18138986-A-T P5_Dst ***
20300868-G-C 18138982-G-C P5_Dst ***
19973999-C-A 17862119-C-A P5_Prx ***
19973992-T-A 17862112-T-A P5_Prx ***
19973991-T-A 17862111-T-A P5_Prx ***
19716019-G-A 17604139-G-A P5_Prx ***
19176538-C-T 17064658-C-T ***
19029214-C-A 16917334-C-A ***
20389781-A-T 18227895-A-T P5_Dst ***
18970304-G-A 16858424-G-A ***
18535421-G-A 16423541-G-A P6_Dst ***
18535420-T-C 16423540-T-C P6_Dst ***
18291131-A-G 16179251-A-G P6_Prx ***
17545799-G-A 15433919-G-A ***
16533570-G-A 14421690-G-A ***
16228081-A-T 14116201-A-T ***
16148743-T-A 14036863-T-A P8_Dst ***
16148741-G-A 14036861-G-A P8_Dst ***
16148721-G-T 14036841-G-T P8_Dst ***
15888047-T-C 13776167-T-C ***
15639879-T-C 13527999-T-C ***
20389774-C-G 18227888-C-G P5_Dst ***
20389800-C-T 18227914-C-T P5_Dst ***
15213438-T-A 13101524-T-A ***
20602226-G-A 18440340-G-A P5_Dst ***
20666135-A-T 18504249-A-T P4_Prx ***
20666132-T-A 18504246-T-A P4_Prx ***
20666128-G-C 18504242-G-C P4_Prx ***
20666124-A-C 18504238-A-C P4_Prx ***
20666120-A-T 18504234-A-T P4_Prx ***
20666116-G-C 18504230-G-C P4_Prx ***
58858993-ATTCCATTGGATTACT-A 56731855-GAATGGAAAGTAATCC-G ***
20666112-A-T 18504226-A-T P4_Prx ***
20666109-G-C 18504223-G-C P4_Prx ***
20602250-C-T 18440364-C-T P5_Dst ***
20602243-G-T 18440357-G-T P5_Dst ***
20602227-T-A 18440341-T-A P5_Dst ***
20602218-T-G 18440332-T-G P5_Dst ***
20389808-T-G 18227922-T-G P5_Dst ***
20541686-T-G 18379800-T-G P5_Dst ***
20541680-T-C 18379794-T-C P5_Dst ***
20541672-T-A 18379786-T-A P5_Dst ***
20442012-C-G 18280126-C-G P5_Dst ***
20441986-A-G 18280100-A-G P5_Dst ***
20441961-T-A 18280075-T-A P5_Dst ***
20441956-A-G 18280070-A-G P5_Dst ***
20389835-A-C 18227949-A-C P5_Dst ***
20389832-G-T 18227946-G-T P5_Dst ***
20389818-A-G 18227932-A-G P5_Dst ***
20389817-C-T 18227931-C-T P5_Dst ***
20389813-G-T 18227927-G-T P5_Dst ***
15320654-A-G 13208760-A-G ***
15213357-C-G 13101443-C-G ***
13109949-T-A 10599435-T-A ***
13328911-A-T 11173235-A-T ***
13699185-T-G 11543509-T-G ***
13699046-G-A 11543370-G-A ***
13698960-C-G 11543284-C-G ***
13698832-G-T 11543156-G-T ***
13517949-T-G 11362273-T-G ***
13488995-C-T 11333319-C-T ***
13488915-G-A 11333239-G-A ***
13477202-C-T 11321526-C-T ***
13476305-G-T 11320629-G-T ***
13470380-G-A 11314704-G-A ***
13470368-C-A 11314692-C-A ***
13470366-G-T 11314690-G-T ***
13223508-G-A 11067832-G-A ***
13700312-A-G 11544636-A-G ***
13223488-G-A 11067812-G-A ***
13223483-G-A 11067807-G-A ***
13120426-A-C 10609912-A-C ***
13110365-T-G 10599851-T-G ***
13110333-T-C 10599819-T-C ***
13110331-A-C 10599817-A-C ***
13110299-G-A 10599785-G-A ***
13110292-C-G 10599778-C-G ***
13110054-C-T 10599540-C-T ***
13110038-C-T 10599524-C-T ***
13109957-G-A 10599443-G-A ***
13109950-C-A 10599436-C-A ***
13700303-A-G 11544627-A-G ***
13700315-C-A 11544639-C-A ***
14990381-G-A 12878466-G-A ***
13728290-G-A 11572614-G-A ***
14911010-C-T 12799077-C-T ***
14703849-T-A 12591915-T-A ***
14703826-T-C 12591892-T-C ***
14703811-T-C 12591877-T-C ***
14703806-T-G 12591872-T-G ***
14703805-T-A 12591871-T-A ***
14625801-T-C 12514069-T-C ***
14564829-T-A 12453029-T-A ***
14259592-A-T 12138886-A-T ***
14058151-G-C 11937445-G-C ***
13923572-T-A 11802866-T-A ***
13728308-T-A 11572632-T-A ***
13728287-T-G 11572611-T-G ***
13700728-A-T 11545052-A-T ***
13720065-G-A 11564389-G-A ***
13720058-G-A 11564382-G-A ***
13720057-T-G 11564381-T-G ***
13720055-G-A 11564379-G-A ***
13720038-C-G 11564362-C-G ***
13715469-C-G 11559793-C-G ***
13715468-A-G 11559792-A-G ***
13701229-T-C 11545553-T-C ***
13701113-G-C 11545437-G-C ***
13701111-A-T 11545435-A-T ***
13701109-G-T 11545433-G-T ***
13701063-G-T 11545387-G-T ***
13701028-T-G 11545352-T-G ***
58981977-TTC-T 56835830-TTC-T ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Haplotype Progression

The data below reveals the progression of changes in the haplotype. The bottom row is the haplotype for this man and above him are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are very much a work in progress, and any suggested modifications are appreciated. I think we can use our vast collection of haplotype data to refine these haplotypes. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

DYS393
DYS390
DYS19
DYS391
DYS385
DYS426
DYS388
DYS439
DYS389i
DYS392
DYS389ii
DYS458
DYS459
DYS455
DYS454
DYS447
DYS437
DYS448
DYS449
DYS464
DYS460
Y-GATA-H4
YCAII
DYS456
DYS607
DYS576
DYS570
CDY
DYS442
DYS438
DYS531
DYS578
DYF395S1
DYS590
DYS537
DYS641
DYS472
DYF406S1
DYS511
DYS425
DYS413
DYS557
DYS594
DYS436
DYS490
DYS534
DYS450
DYS444
DYS481
DYS520
DYS446
DYS617
DYS568
DYS487
DYS572
DYS640
DYS492
DYS565
DYS710
DYS485
DYS632
DYS495
DYS540
DYS714
DYS716
DYS717
DYS505
DYS556
DYS549
DYS589
DYS522
DYS494
DYS533
DYS636
DYS575
DYS638
DYS462
DYS452
DYS445
Y-GATA-A10
DYS463
DYS441
Y-GGAAT-1B07
DYS525
DYS712
DYS593
DYS650
DYS532
DYS715
DYS504
DYS513
DYS561
DYS552
DYS726
DYS635
DYS587
DYS643
DYS497
DYS510
DYS434
DYS461
DYS435
P312/S1161324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123315916122626191211131210912121011113012132413101020151913241712152412231810141791211
Turner1324141011-14121212131330179-1011112515193015-15-17-17111119-231514181836-37121211915-1681010810101223-231610121215812222013121113111112123515916132627201211121110912111011113012132413101020151713241612152412231810141891211

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: GYBGZ*16000000100000008300000
Used in age calculations16000000100000008300000
Counts of SNPs97
Variant counts last updated 2017-12-13 11:36:59.

* BED data not available. Using default values.


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