Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > ZZ12 > ZZ19 > Z34609 > Z2571 > FGC11380 > FGC11388 > FGC11414 > FGC11407

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
GYBGZ
6896704-C-G 7028663-C-G FGC11402 YY+
16210601-C-G 14098721-C-G FGC11406 Y+
8491779-C-T 8623738-C-T FGC11403 YY+
18060231-C-T 15948351-C-T FGC11410 YY+
17930321-C-T 15818441-C-T FGC11409 Y+
17605521-T-C 15493641-T-C FGC11408 YY+
21709352-G-C 19547466-G-C FGC11412 YY+
15635682-A-C 13523802-A-C FGC11405 YY+
22440900-T-G 20279014-T-G FGC11415 DYZ19 *
23091536-G-A 20929650-G-A FGC11417 YY*
27461323-A-G 25315176-A-G P1_Y2 **
13805487-G-A 11684781-G-A FGC44465 **
22438020-A-T 20276134-A-T DYZ19 **
2984844-T-A 3116803-T-A **
2984843-T-A 3116802-T-A **
28749603-A-C 26603456-A-C **
13515516-T-C 11359840-T-C **
14625798-TG-T 12514066-GG-T **
13256143-C-T 11100467-C-T **
13221521-C-T 11065845-C-T **
13221465-A-C 11065789-A-C **
5886046-A-T 6018005-A-T 4×ATTT**
13372165-A-C 11216489-A-C **
3640987-TTTTCCTTTCCTTTCC-T 3772946-TTTTCCTTTCCTTTCC-T 11×TTTCC**
23241947-C-CTTTTTT 21080061-C-CTTTTTT 27×T**
24254143-G-A 22107996-G-A P3_b1 10×AC***
25990632-G-T 23844485-G-T P1_Y1 ***
25990620-T-G 23844473-T-G P1_Y1 ***
25990618-C-G 23844471-C-G P1_Y1 ***
24374452-T-A 22228305-T-A ***
24491126-A-G 22344979-A-G ***
24415762-A-T 22269615-A-T ***
24254165-A-G 22108018-A-G P3_b1 ***
24254155-C-G 22108008-C-G P3_b1 ***
24415748-A-T 22269601-A-T ***
24254161-C-T 22108014-C-T P3_b1 ***
24134494-C-A 21988347-C-A P3_b1 ***
24415756-A-T 22269609-A-T ***
26391325-T-G 24245178-T-G P1_Y1 ***
26252690-A-T 24106543-A-T P1_Y1 ***
27415889-A-T 25269742-A-T P1_g3 ***
27614337-C-A 25468190-C-A P1_Y2 ***
27614336-T-A 25468189-T-A P1_Y2 ***
27614333-C-A 25468186-C-A P1_Y2 ***
27614332-T-A 25468185-T-A P1_Y2 ***
27614321-G-T 25468174-G-T P1_Y2 ***
27560212-C-G 25414065-C-G P1_Y2 ***
27560209-G-A 25414062-G-A P1_Y2 ***
27560207-C-A 25414060-C-A P1_Y2 ***
27461760-T-A 25315613-T-A P1_Y2 ***
27415905-T-A 25269758-T-A P1_g3 ***
27415895-G-C 25269748-G-C P1_g3 ***
27415893-T-A 25269746-T-A P1_g3 ***
27415891-G-A 25269744-G-A P1_g3 ***
27415878-T-A 25269731-T-A P1_g3 ***
26252693-C-T 24106546-C-T P1_Y1 ***
27339358-C-T 25193211-C-T P1_g3 ***
27321017-C-T 25174870-C-T P1_g3 ***
27321015-C-T 25174868-C-T P1_g3 ***
27321005-G-T 25174858-G-T P1_g3 ***
27162020-T-A 25015873-T-A P1_g3 18×A***
27130165-A-T 24984018-A-T P1_g3 ***
27130161-A-G 24984014-A-G P1_g3 ***
27130157-T-A 24984010-T-A P1_g3 ***
27056070-T-A 24909923-T-A P1_r4 ***
27035479-C-T 24889332-C-T P1_r4 ***
26501077-G-A 24354930-G-A P1_Y1 ***
26391354-T-A 24245207-T-A P1_Y1 ***
26325005-C-T 24178858-C-T P1_Y1 ***
23713761-T-G 21551875-T-G ***
13477371-G-C 11321695-G-C ***
22635579-T-A 20473693-T-A ***
22292698-G-T 20130812-G-T DYZ19 ***
22438754-T-A 20276868-T-A DYZ19 ***
22359796-A-G 20197910-A-G DYZ19 ***
22344289-G-T 20182403-G-T DYZ19 ***
22344237-A-T 20182351-A-T DYZ19 ***
22343907-C-A 20182021-C-A DYZ19 ***
22338190-A-T 20176304-A-T DYZ19 ***
22335201-G-T 20173315-G-T DYZ19 ***
22335198-A-C 20173312-A-C DYZ19 ***
22309346-G-A 20147460-G-A DYZ19 ***
22308616-G-T 20146730-G-T DYZ19 ***
22292772-G-T 20130886-G-T DYZ19 ***
22289747-C-A 20127861-C-A DYZ19 ***
22438791-C-T 20276905-C-T DYZ19 ***
22273552-T-A 20111666-T-A DYZ19 ***
22250531-G-A 20088645-G-A DYZ19 ***
22250504-T-A 20088618-T-A DYZ19 ***
22250259-C-A 20088373-C-A DYZ19 ***
22235085-C-A 20073199-C-A DYZ19 ***
22235079-C-A 20073193-C-A DYZ19 ***
22235075-G-T 20073189-G-T DYZ19 ***
22235063-C-G 20073177-C-G DYZ19 ***
22225959-G-T 20064073-G-T DYZ19 ***
22225954-G-A 20064068-G-A DYZ19 ***
21537619-G-T 19375733-G-T ***
22438780-T-G 20276894-T-G DYZ19 ***
22438873-A-G 20276987-A-G DYZ19 ***
22635578-T-A 20473692-T-A ***
22440638-T-G 20278752-T-G DYZ19 ***
22504369-G-T 20342483-G-T DYZ19 ***
22504365-T-C 20342479-T-C DYZ19 ***
22499854-G-A 20337968-G-A DYZ19 ***
22495933-T-A 20334047-T-A DYZ19 ***
22491437-T-C 20329551-T-C DYZ19 ***
22491392-C-G 20329506-C-G DYZ19 ***
22491031-T-G 20329145-T-G DYZ19 ***
22440740-C-A 20278854-C-A BY39283 DYZ19 ***
22440719-C-T 20278833-C-T BY15810 DYZ19 ***
22440718-C-A 20278832-C-A DYZ19 ***
22440676-G-A 20278790-G-A DYZ19 ***
22440621-G-T 20278735-G-T DYZ19 ***
22438913-T-A 20277027-T-A DYZ19 ***
22440497-T-G 20278611-T-G A4268 DYZ19 ***
22439865-T-A 20277979-T-A DYZ19 ***
22439818-T-C 20277932-T-C DYZ19 ***
22439801-A-G 20277915-A-G DYZ19 ***
22439601-A-G 20277715-A-G DYZ19 ***
22439588-G-T 20277702-G-T DYZ19 ***
22439179-G-T 20277293-G-T A6011 BY6801 DYZ19 ***
22439020-T-A 20277134-T-A DYZ19 ***
22438999-C-T 20277113-C-T DYZ19 ***
22438997-T-A 20277111-T-A DYZ19 ***
22438989-C-T 20277103-C-T DYZ19 ***
22438954-A-G 20277068-A-G DYZ19 ***
22498433-G-A 20336547-G-A DYZ19 ***
27814363-A-T 25668216-A-T P1_Y2 ***
27614362-C-A 25468215-C-A P1_Y2 ***
13488843-TG-CC 11333167-TG-CC ***
18612759-G-GTA 16500879-G-GTA 15×TA***
17604931-G-GTTTTTTT 15493051-G-GTTTTTTT 24×T***
17332750-CAAAAAA-C 15220870-CAAAAAA-C 22×A***
16205796-CTTTTTTTTTTT-C 14093916-CTTTTTTTTTTT-C 21×T***
15940331-G-AAA 13828451-G-AAA ***
15842559-T-TTC 13730679-T-TTC ***
15018939-G-GTTTTT 12907028-G-GTTTTT 15×T***
14429405-TTATA-T 12308680-TTA-T 15×TA***
13728570-GA-TG 11572894-GA-TG ***
13700757-T-TGGAAA 11545081-T-TGGAAA ***
13700736-AGTAGAATAAATACT-A 11545060-AGTAGAATAAATACT-A ***
13486802-A-AC 11331126-A-AC ***
18735674-C-CTTTTT 16623794-C-CTTTTT 24×T***
13480021-TCTG-CCTA 11324345-TCTG-CCTA ***
13477362-TCCT-CCCG 11321686-TCCT-CCCG ***
13203963-TGG-CGGT 11048287-TGG-CGGT ***
13203922-CGGC-TGGT 11048246-CGGC-TGGT ***
13110331-ATTG-CTCA 10599817-ATTG-CTCA ***
10034819-TGGACTCCT-GGGACGCCG 10197210-TGGACTCCT-GGGACGCCG ***
8452192-C-AA 8584151-C-AA 15×A***
7418073-C-CAA 7550032-C-CAA 22×A***
6089764-G-GTTTTTTT 6221723-G-GTTTTTTT 31×T***
5593309-CAA-C 5725268-CAA-C 15×A***
5590714-G-GA 5722673-G-GA 10×A***
5574077-CTT-C 5706036-CTT-C 19×T***
18612766-T-TATATACACACACACAC 16500886-T-TATATACACACACACAC ***
19346433-C-TCTTT 17234553-C-TCTTT 15×CTTT***
3550569-CAACTC-AAA 3682528-CAACTC-AAA ***
22440762-TTTAAAA-CTTAGAG 20278876-TTTAAAA-CTTAGAG DYZ19 ***
58870534-TTTCCA-ATTCGT 56720332-TGGAAA-ACGAAT ***
58858959-CTCTATC-TTCCATT 56731906-GATAGAG-AATGGAA ***
58843791-TTTTGAA-ATTTGAT 56747074-TTCAAAA-ATCAAAT ***
58840663-ATGAAT-A 56750201-GAATTC-G ***
28798940-TAT-GAA 26652793-TAT-GAA ***
28721499-C-CAAAA 26575352-C-CAAAA 18×A***
28461722-C-CTTTT 26315575-C-CTTTT 19×T***
27714328-CTTTT-C 25568181-CTTTT-C P1_Y2 15×T***
27130157-TGCCAATGA-AGCCGATGT 24984010-TGCCAATGA-AGCCGATGT P1_g3 ***
24388085-T-TAG 22241938-T-TAG ***
23199746-A-ACCCCCCC 21037860-A-ACCCCCCC 11×C***
22481631-AG-TA 20319745-AG-TA DYZ19 ***
22440731-AA-GC 20278845-AA-GC DYZ19 ***
19775302-C-CTTTTT 17663422-C-CTTTTT P5_Prx 32×T***
22440716-CCCC-TAAT 20278830-CCCC-TAAT DYZ19 ***
22440606-GCTCCAGTCA-TCTGCGGACC 20278720-GCTCCAGTCA-TCTGCGGACC DYZ19 ***
22439914-TTTAAC-GTTACA 20278028-TTTAAC-GTTACA DYZ19 ***
22438771-GT-AG 20276885-GT-AG DYZ19 ***
22438762-AG-A 20276876-AG-A DYZ19 ***
22352888-AC-GT 20191002-AC-GT DYZ19 ***
22308615-AG-GT 20146729-AG-GT DYZ19 ***
22232331-TA-CG 20070445-TA-CG DYZ19 ***
21096458-C-CAAAAAAA 18934572-C-CAAAAAAA 16×A***
20989156-TAT-CAC 18827270-TAT-CAC P4_Dst ***
20025478-T-TCCCCCCCCCC 17913598-T-TCCCCCCCCCC P5_Prx ***
19937284-G-GCCC 17825404-G-GCCC P5_Prx 13×C***
5354747-CACAT-TACAC 5486706-CACAT-TACAC ***
2984843-TT-AA 3116802-TT-AA ***
27814350-G-A 25668203-G-A P1_Y2 ***
27998518-A-T 25852371-A-T P1_Y2 ***
58841128-T-A 56749743-A-T ***
58838488-C-G 56752383-G-C ***
58833207-T-C 56757664-A-G ***
58833191-A-T 56757680-T-A ***
58830984-A-T 56759887-T-A ***
28491517-A-T 26345370-A-T ***
28491404-C-A 26345257-C-A ***
28491283-G-A 26345136-G-A ***
28236506-C-T 26090359-C-T P1_b4 ***
27998523-A-T 25852376-A-T P1_Y2 ***
27998521-C-A 25852374-C-A P1_Y2 ***
27832770-A-C 25686623-A-C P1_Y2 ***
58843762-T-C 56747109-A-G ***
27832768-A-T 25686621-A-T P1_Y2 ***
27832762-A-C 25686615-A-C P1_Y2 ***
27832761-G-T 25686614-G-T P1_Y2 ***
27832760-A-T 25686613-A-T P1_Y2 ***
27832759-A-T 25686612-A-T P1_Y2 ***
27832757-G-C 25686610-G-C P1_Y2 ***
27832755-G-T 25686608-G-T P1_Y2 ***
20685719-G-A 18523833-G-A P4_Prx ***
27814355-C-A 25668208-C-A P1_Y2 ***
27814354-T-A 25668207-T-A P1_Y2 ***
27814353-T-A 25668206-T-A P1_Y2 ***
27814352-T-A 25668205-T-A P1_Y2 ***
58843754-C-A 56747117-G-T ***
58843780-G-C 56747091-C-G ***
3889019-C-CT 4020978-C-CT 15×T***
58868303-C-A 56722568-G-T ***
23025229-C-CAA 20863343-C-CAA 29×A***
10013371-TG-CT 10175762-TG-CT ***
58995130-TG-CA 56848983-TG-CA ***
58914442-C-G 56676429-G-C ***
58912672-C-T 56678199-G-A ***
58910961-T-A 56679910-A-T ***
58903726-C-T 56687145-G-A ***
58883262-G-T 56707609-C-A ***
58877106-A-T 56713765-T-A ***
58875030-A-C 56715841-T-G ***
58870720-G-C 56720151-C-G ***
58870288-T-A 56720583-A-T ***
58865732-G-C 56725139-C-G ***
58846200-T-A 56744671-A-T ***
58865728-G-T 56725143-C-A ***
58865705-T-A 56725166-A-T ***
58865700-T-G 56725171-A-C ***
58859563-T-G 56731308-A-C ***
58859561-G-C 56731310-C-G ***
58856591-C-A 56734280-G-T ***
58854403-C-G 56736468-G-C ***
58854402-C-T 56736469-G-A ***
58852114-G-T 56738757-C-A ***
58849214-T-C 56741657-A-G ***
58848550-G-C 56742321-C-G ***
58848518-A-C 56742353-T-G ***
21208962-G-A 19047076-G-A ***
20666115-A-T 18504229-A-T P4_Prx ***
20685713-C-T 18523827-C-T P4_Prx ***
22292722-G-T 20130836-G-T DYZ19 ***
5434069-C-T 5566028-C-T ***
4820845-G-C 4952804-G-C ***
3902543-A-T 4034502-A-T ***
3902541-A-T 4034500-A-T ***
3070633-A-G 3202592-A-G ***
22292727-G-A 20130841-G-A DYZ19 ***
25626758-G-A 23480611-G-A P1_b3 ***
58880563-G-C 56710308-C-G ***
26190539-C-T 24044392-C-T P1_Y1 ***
22344309-G-C 20182423-G-C DYZ19 ***
13110087-A-T 10599573-A-T ***
23713770-G-A 21551884-G-A ***
6725397-T-C 6857356-T-C ***
13472916-T-C 11317240-T-C ***
22440551-T-G 20278665-T-G BY21269 DYZ19 ***
22440615-A-C 20278729-A-C BY21270 DYZ19 ***
22440717-C-A 20278831-C-A BY21274 DYZ19 ***
58995123-A-G 56848976-A-G ***
13728585-G-A 11572909-G-A ***
59007959-C-CAAAAAAAA 56861812-C-CAAAAAAAA 26×A***
22504362-G-T 20342476-G-T DYZ19 ***
13472906-A-C 11317230-A-C F18178 ***
13472933-A-T 11317257-A-T ***
22250480-A-G 20088594-A-G DYZ19 ***
6577523-A-T 6709482-A-T ***
7873981-T-A 8005940-T-A ***
22250493-G-T 20088607-G-T DYZ19 ***
10090440-A-G 10252831-A-G ***
13109949-T-A 10599435-T-A ***
13109945-A-T 10599431-A-T ***
13109921-T-C 10599407-T-C ***
13109914-A-G 10599400-A-G ***
13109888-A-G 10599374-A-G ***
10091218-C-T 10253609-C-T ***
10090676-T-A 10253067-T-A ***
10090672-T-A 10253063-T-A ***
10090458-A-T 10252849-A-T ***
10090445-G-T 10252836-G-T ***
10090442-T-A 10252833-T-A ***
10084476-T-A 10246867-T-A ***
7939421-C-T 8071380-C-T ***
10084466-G-A 10246857-G-A ***
10084462-A-G 10246853-A-G ***
10084453-G-T 10246844-G-T ***
10084421-A-T 10246812-A-T ***
9704387-T-A 9866778-T-A IR3_Prx ***
9590422-G-T 9752813-G-T IR3_Prx ***
9590416-C-T 9752807-C-T IR3_Prx ***
9590415-G-T 9752806-G-T IR3_Prx ***
9429259-T-C 9591650-T-C ***
9368488-T-C 9530879-T-C ***
9353653-T-A 9516044-T-A ***
8293606-C-A 8425565-C-A ***
13109944-T-A 10599430-T-A ***
13460165-GTG-TTC 11304489-GTG-TTC ***
13109957-G-A 10599443-G-A ***
58869760-C-G 56721111-G-C ***
58848818-T-A 56742053-A-T ***
58848817-T-G 56742054-A-C ***
58848796-T-A 56742075-A-T ***
58848788-G-T 56742083-C-A ***
20541524-A-G 18379638-A-G P5_Dst ***
13483953-T-G 11328277-T-G ***
58913236-G-T 56677635-C-A ***
58895199-C-A 56695672-G-T ***
22496058-T-A 20334172-T-A DYZ19 ***
13728302-C-A 11572626-C-A ***
58877107-T-C 56713764-A-G ***
20531503-T-C 18369617-T-C P5_Dst ***
13120428-C-T 10609914-C-T ***
20531502-A-T 18369616-A-T P5_Dst ***
20531449-A-G 18369563-A-G P5_Dst ***
19656733-A-T 17544853-A-T P5_Prx ***
13728292-G-A 11572616-G-A ***
13109961-T-G 10599447-T-G ***
58870737-A-T 56720134-T-A ***
13728301-T-A 11572625-T-A ***
25268596-G-A 23122449-G-A P2_r1 ***
22496172-T-A 20334286-T-A DYZ19 ***
22361234-C-A 20199348-C-A DYZ19 ***
22440308-T-G 20278422-T-G FGC8621Z17584 DYZ19 ***
13120420-A-T 10609906-A-T ***
13120469-C-G 10609955-C-G ***
10090513-C-T 10252904-C-T ***
19610119-C-T 17498239-C-T P5_Prx ***
13203955-CATCATT-GATGATA 11048279-CATCATT-GATGATA ***
13515526-T-C 11359850-T-C ***
13110115-T-A 10599601-T-A ***
22504467-T-G 20342581-T-G DYZ19 ***
22256945-A-G 20095059-A-G DYZ19 ***
59007432-C-CTTTATT 56861285-C-CTTTATT 18×T***
22439187-C-T 20277301-C-T BY19692 DYZ19 ***
26391353-AT-TAA 24245206-AT-TAA P1_Y1 ***
3411996-TTGTGTGTGTGTGTG-T 3543955-TTGTGTGTGTGTGTG-T 23×TG***
9301402-TA-AG 9463793-TA-AG ***
28356602-A-T 26210455-A-T P1_gr2 ***
13460172-G-T 11304496-G-T ***
24381403-T-AA 22235256-T-AA ***
9956269-CATC-AATT 10118660-CATC-AATT ***
22300958-G-C 20139072-G-C DYZ19 ***
58836048-C-T 56754823-G-A ***
22491371-G-T 20329485-G-T DYZ19 ***
58914422-C-CCATTG 56676444-G-GAATGC ***
58839784-G-T 56751087-C-A ***
13109923-C-T 10599409-C-T ***
13109899-G-T 10599385-G-T ***
58865808-A-C 56725063-T-G ***
22252915-T-G 20091029-T-G DYZ19 ***
22503533-A-G 20341647-A-G DYZ19 ***
10090493-A-G 10252884-A-G ***
13109950-C-A 10599436-C-A ***
13110038-C-T 10599524-C-T ***
20666136-A-C 18504250-A-C P4_Prx ***
19716019-G-A 17604139-G-A P5_Prx ***
20389774-C-G 18227888-C-G P5_Dst ***
20389769-C-A 18227883-C-A P5_Dst ***
20333863-G-A 18171977-G-A P5_Dst ***
20300908-C-T 18139022-C-T P5_Dst ***
20300888-G-A 18139002-G-A P5_Dst ***
20300875-T-A 18138989-T-A P5_Dst ***
20300872-A-T 18138986-A-T P5_Dst ***
20300868-G-C 18138982-G-C P5_Dst ***
19973999-C-A 17862119-C-A P5_Prx ***
19973992-T-A 17862112-T-A P5_Prx ***
19973991-T-A 17862111-T-A P5_Prx ***
19176538-C-T 17064658-C-T ***
20389800-C-T 18227914-C-T P5_Dst ***
19176484-T-C 17064604-T-C ***
19029214-C-A 16917334-C-A ***
18970304-G-A 16858424-G-A ***
18535421-G-A 16423541-G-A P6_Dst ***
18535420-T-C 16423540-T-C P6_Dst ***
18291131-A-G 16179251-A-G P6_Prx ***
17545799-G-A 15433919-G-A ***
16533570-G-A 14421690-G-A ***
16228081-A-T 14116201-A-T ***
16148743-T-A 14036863-T-A P8_Dst ***
16148741-G-A 14036861-G-A P8_Dst ***
20389781-A-T 18227895-A-T P5_Dst ***
20389808-T-G 18227922-T-G P5_Dst ***
15888047-T-C 13776167-T-C ***
20602227-T-A 18440341-T-A P5_Dst ***
20666135-A-T 18504249-A-T P4_Prx ***
20666132-T-A 18504246-T-A P4_Prx ***
20666128-G-C 18504242-G-C P4_Prx ***
20666124-A-C 18504238-A-C P4_Prx ***
20666120-A-T 18504234-A-T P4_Prx ***
20666116-G-C 18504230-G-C P4_Prx ***
58858993-ATTCCATTGGATTACT-A 56731855-GAATGGAAAGTAATCC-G ***
20666112-A-T 18504226-A-T P4_Prx ***
20666109-G-C 18504223-G-C P4_Prx ***
20602250-C-T 18440364-C-T P5_Dst ***
20602243-G-T 18440357-G-T P5_Dst ***
20602226-G-A 18440340-G-A P5_Dst ***
20389813-G-T 18227927-G-T P5_Dst ***
20602218-T-G 18440332-T-G P5_Dst ***
20541686-T-G 18379800-T-G P5_Dst ***
20541680-T-C 18379794-T-C P5_Dst ***
20541672-T-A 18379786-T-A P5_Dst ***
20442012-C-G 18280126-C-G P5_Dst ***
20441986-A-G 18280100-A-G P5_Dst ***
20441961-T-A 18280075-T-A P5_Dst ***
20441956-A-G 18280070-A-G P5_Dst ***
20389835-A-C 18227949-A-C P5_Dst ***
20389832-G-T 18227946-G-T P5_Dst ***
20389818-A-G 18227932-A-G P5_Dst ***
20389817-C-T 18227931-C-T P5_Dst ***
16148721-G-T 14036841-G-T P8_Dst ***
15639879-T-C 13527999-T-C ***
13110054-C-T 10599540-C-T ***
13476305-G-T 11320629-G-T ***
13701028-T-G 11545352-T-G ***
13700728-A-T 11545052-A-T ***
13700315-C-A 11544639-C-A ***
13700312-A-G 11544636-A-G ***
13700303-A-G 11544627-A-G ***
13699185-T-G 11543509-T-G ***
13699046-G-A 11543370-G-A ***
13698960-C-G 11543284-C-G ***
13698832-G-T 11543156-G-T ***
13517949-T-G 11362273-T-G ***
13477202-C-T 11321526-C-T ***
13470380-G-A 11314704-G-A ***
13701109-G-T 11545433-G-T ***
13470368-C-A 11314692-C-A ***
13470366-G-T 11314690-G-T ***
13328911-A-T 11173235-A-T ***
13223508-G-A 11067832-G-A ***
13223488-G-A 11067812-G-A ***
13223483-G-A 11067807-G-A ***
13120426-A-C 10609912-A-C ***
13110365-T-G 10599851-T-G ***
13110333-T-C 10599819-T-C ***
13110331-A-C 10599817-A-C ***
13110299-G-A 10599785-G-A ***
13110292-C-G 10599778-C-G ***
13701063-G-T 11545387-G-T ***
13701111-A-T 11545435-A-T ***
15320654-A-G 13208760-A-G ***
14259592-A-T 12138886-A-T ***
15213438-T-A 13101524-T-A ***
15213357-C-G 13101443-C-G ***
14990381-G-A 12878466-G-A ***
14911010-C-T 12799077-C-T ***
14703849-T-A 12591915-T-A ***
14703826-T-C 12591892-T-C ***
14703811-T-C 12591877-T-C ***
14703806-T-G 12591872-T-G ***
14703805-T-A 12591871-T-A ***
14625801-T-C 12514069-T-C ***
14564829-T-A 12453029-T-A BY16662 ***
14058151-G-C 11937445-G-C ***
13701113-G-C 11545437-G-C ***
13923572-T-A 11802866-T-A ***
13728308-T-A 11572632-T-A ***
13728290-G-A 11572614-G-A ***
13728287-T-G 11572611-T-G ***
13720065-G-A 11564389-G-A ***
13720058-G-A 11564382-G-A ***
13720057-T-G 11564381-T-G ***
13720055-G-A 11564379-G-A ***
13720038-C-G 11564362-C-G ***
13715469-C-G 11559793-C-G BY26305 ***
13715468-A-G 11559792-A-G ***
13701229-T-C 11545553-T-C ***
58981977-TTC-T 56835830-TTC-T ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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