Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > ZZ12 > ZZ19 > Z34609 > Z2571 > FGC11380 > FGC11388 > FGC11414 > FGC11407

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
WBAFF
Manual
Edits
17978074-C-T 15866194-C-T FGC12963 Y+
22638892-C-T 20477006-C-T FGC12968 Y+
17920681-G-A 15808801-G-A FGC12962 YY+
18984167-G-T 16872287-G-T FGC12964 YY+
17904460-A-G 15792580-A-G FGC12961 YY+
7852218-C-A 7984177-C-A FGC12957 YY+
17805727-C-A 15693847-C-A FGC12960 YY+
20839342-C-G 18677456-C-G FGC12966 P4_Gap +
6791995-T-TA 6923954-T-TA FGC12970 +
19270805-T-G 17158925-T-G FGC12965 YY+
24417082-AAG-A 22270935-AAG-A FGC12971 +
21805615-T-C 19643729-T-C FGC12967 Y+
22718690-G-A 20556804-G-A FGC12969 YY+
17263457-C-T 15151577-C-T FGC12959 YY+
16709698-G-T 14597818-G-T FGC12958 Y*
6934687-G-A 7066646-G-A FGC12955 YY*
5242410-G-C 5374369-G-C FGC12953 *
5364915-T-C 5496874-T-C FGC12954 *
7300285-A-T 7432244-A-T FGC12956 Y*
17662535-GGGAT-G 15550655-GGGAT-G 7×GGAT**
19098185-C-A 16986305-C-A **
23076962-G-T 20915076-G-T **
17618867-A-G 15506987-A-G **
10033516-T-G 10195907-T-G **
13434851-T-G 11279175-T-G **
15672565-A-G 13560685-A-G **
3022096-A-G 3154055-A-G **
3279614-G-A 3411573-G-A **
18042110-C-G 15930230-C-G **
3869133-T-C 4001092-T-C **
3869134-G-A 4001093-G-A **
4521772-C-T 4653731-C-T **
15098587-A-G 12986675-A-G **
14741472-C-A 12629540-C-A **
14314276-G-T 12193570-G-T **
7002947-G-T 7134906-G-T **
8238268-T-C 8370227-T-C **
8733271-G-A 8865230-G-A **
13465690-G-A 11310014-G-A **
15180003-T-G 13068089-T-G **
3215508-A-T 3347467-A-T **
10022318-A-AAATAAATG 10184709-A-AAATAAATG **
21283654-CTCCTCCTCCTCTTTGTT-C 19121768-CTCCTCCTCCTCTTTGTT-C **
18958141-G-T 16846261-G-T **
21184484-G-A 19022598-G-A **
21234902-T-A 19073016-T-A **
22365853-G-A 20203967-G-A DYZ19 ***
27247767-A-C 25101620-A-C P1_g3 ***
20672738-G-A 18510852-G-A P4_Prx ***
27234958-T-A 25088811-T-A P1_g3 ***
27234970-G-A 25088823-G-A P1_g3 ***
27234971-C-A 25088824-C-A P1_g3 ***
20672732-G-A 18510846-G-A P4_Prx ***
27343755-C-T 25197608-C-T P1_g3 ***
27343756-C-T 25197609-C-T P1_g3 ***
27234943-T-A 25088796-T-A P1_g3 ***
27343759-T-A 25197612-T-A P1_g3 ***
20672729-C-A 18510843-C-A P4_Prx ***
27343776-G-T 25197629-G-T P1_g3 ***
27234944-T-A 25088797-T-A P1_g3 ***
26477031-G-C 24330884-G-C P1_Y1 ***
27234934-T-C 25088787-T-C P1_g3 ***
20672762-G-A 18510876-G-A P4_Prx ***
26560722-T-G 24414575-T-G P1_g2 ***
27343791-A-G 25197644-A-G P1_g3 ***
26477022-C-T 24330875-C-T P1_Y1 ***
26477014-G-A 24330867-G-A P1_Y1 ***
26477013-G-A 24330866-G-A P1_Y1 ***
26475024-G-T 24328877-G-T P1_Y1 ***
26475022-G-T 24328875-G-T P1_Y1 ***
26386706-G-T 24240559-G-T P1_Y1 ***
26386501-G-A 24240354-G-A P1_Y1 ***
26364265-G-T 24218118-G-T P1_Y1 ***
26364249-A-G 24218102-A-G P1_Y1 ***
26364244-C-A 24218097-C-A P1_Y1 ***
27343789-G-T 25197642-G-T P1_g3 ***
27398915-A-T 25252768-A-T P1_g3 ***
20672728-A-G 18510842-A-G P4_Prx ***
28803664-T-A 26657517-T-A ***
58843552-T-C 56747319-A-G ***
58840645-A-C 56750226-T-G ***
58834452-T-G 56756419-A-C ***
58828858-C-G 56762013-G-C ***
58827713-C-A 56763158-G-T ***
58823689-G-T 56767182-C-A ***
58823674-G-T 56767197-C-A ***
58823671-G-C 56767200-C-G ***
58823670-T-C 56767201-A-G ***
58823656-G-C 56767215-C-G ***
58823620-G-C 56767251-C-G ***
28803676-G-A 26657529-G-A ***
28803673-G-A 26657526-G-A ***
28803668-G-A 26657521-G-A ***
28803660-G-A 26657513-G-A ***
27378749-G-A 25232602-G-A P1_g3 ***
28253222-G-A 26107075-G-A P1_b4 ***
28061358-A-T 25915211-A-T P1_Y2 ***
28061356-T-A 25915209-T-A P1_Y2 ***
28061340-A-G 25915193-A-G P1_Y2 ***
20672717-C-T 18510831-C-T P4_Prx ***
28061325-C-T 25915178-C-T P1_Y2 ***
27881981-T-G 25735834-T-G P1_Y2 ***
27881978-C-T 25735831-C-T P1_Y2 ***
27881964-C-A 25735817-C-A P1_Y2 ***
27881953-A-T 25735806-A-T P1_Y2 ***
27881951-G-A 25735804-G-A P1_Y2 ***
27734952-C-T 25588805-C-T P1_Y2 ***
27734947-A-G 25588800-A-G P1_Y2 ***
26234474-A-T 24088327-A-T P1_Y1 ***
26364243-G-A 24218096-G-A P1_Y1 ***
21057020-T-C 18895134-T-C ***
26234472-T-C 24088325-T-C P1_Y1 ***
23094787-A-T 20932901-A-T ***
24533795-T-A 22387648-T-A P3_t2 ***
24533792-T-C 22387645-T-C P3_t2 ***
24533791-C-T 22387644-C-T P3_t2 ***
24533779-A-C 22387632-A-C P3_t2 ***
24295385-C-T 22149238-C-T P3_t1 ***
24295380-C-T 22149233-C-T P3_t1 ***
24295364-T-A 22149217-T-A P3_t1 9×AC***
23321515-A-G 21159629-A-G ***
22265810-C-G 20103924-C-G DYZ19 ***
23321473-G-T 21159587-G-T ***
22297310-A-T 20135424-A-T DYZ19 ***
23095909-A-G 20934023-A-G ***
22297331-G-A 20135445-G-A DYZ19 ***
22297340-C-T 20135454-C-T DYZ19 ***
24533817-G-T 22387670-G-T P3_t2 ***
22756590-C-T 20594704-C-T ***
22297343-T-A 20135457-T-A DYZ19 ***
22309377-T-G 20147491-T-G DYZ19 ***
22530300-G-T 20368414-G-T ***
22504773-C-G 20342887-C-G DYZ19 ***
22337607-A-G 20175721-A-G DYZ19 ***
22499897-A-G 20338011-A-G DYZ19 ***
22337615-C-T 20175729-C-T DYZ19 ***
22343084-A-C 20181198-A-C DYZ19 ***
22343196-T-C 20181310-T-C DYZ19 ***
22360408-T-C 20198522-T-C DYZ19 ***
22499896-C-T 20338010-C-T DYZ19 ***
22495804-A-C 20333918-A-C DYZ19 ***
24533803-T-C 22387656-T-C P3_t2 ***
22263781-T-G 20101895-T-G DYZ19 ***
26234410-A-T 24088263-A-T P1_Y1 ***
22224527-C-A 20062641-C-A DYZ19 ***
22367644-C-G 20205758-C-G DYZ19 ***
26234409-A-T 24088262-A-T P1_Y1 ***
21184481-C-G 19022595-C-G ***
21234907-A-G 19073021-A-G ***
21234908-G-A 19073022-G-A ***
26234404-A-T 24088257-A-T P1_Y1 ***
26234403-A-T 24088256-A-T P1_Y1 ***
26234400-C-G 24088253-C-G P1_Y1 ***
26234398-G-A 24088251-G-A P1_Y1 ***
21349187-T-C 19187301-T-C ***
26182218-T-G 24036071-T-G P1_Y1 ***
21601466-A-G 19439580-A-G ***
21677672-A-T 19515786-A-T ***
26182197-G-T 24036050-G-T P1_Y1 ***
24533823-G-T 22387676-G-T P3_t2 ***
26127930-T-A 23981783-T-A P1_Y1 ***
26099440-C-T 23953293-C-T P1_Y1 ***
26091888-T-G 23945741-T-G P1_Y1 ***
22234441-T-G 20072555-T-G DYZ19 ***
58843712-T-G 56747159-A-C ***
26057086-A-G 23910939-A-G P1_Y1 ***
22247386-C-A 20085500-C-A DYZ19 ***
25963867-C-T 23817720-C-T P1_Y1 34×T***
25896723-T-A 23750576-T-A P1_Y1 ***
25896721-G-C 23750574-G-C P1_Y1 ***
25664565-C-G 23518418-C-G P1_b3 ***
25651608-C-T 23505461-C-T P1_b3 ***
25356328-C-T 23210181-C-T P2_r2 ***
25114387-A-G 22968240-A-G g1 ***
58843670-C-A 56747201-G-T ***
58912477-G-C 56678394-C-G 4×CATTC***
58843751-A-G 56747120-T-C ***
13848875-ATA-CTG 11728169-ATA-CTG ***
13535651-A-ATGTGTGTGTG 11379975-A-ATGTGTGTGTG ***
13535656-T-TACAC 11379980-T-TACAC ***
13694707-CAATGA-C 11539031-CAATGA-C ***
13701443-TC-GG 11545767-TC-GG ***
13701767-TACC-GAGT 11546091-TACC-GAGT ***
13832645-CTC-GTG 11711939-CTC-GTG ***
13848882-TGAAT-GGAAG 11728176-TGAAT-GGAAG ***
13485854-CCGCCTG-TCACCTC 11330178-CCGCCTG-TCACCTC ***
13884529-CAA-C 11763823-CAA-C 17×A***
14435833-CACGTTATTGA-TACATTACTGG 12315106-CACGTTATTGA-TACATTACTGG ***
14866151-G-GTGTA 12754221-G-GTGTA ***
15865946-C-CTTTTTTTTTTTTTTTTT 13754066-C-CTTTTTTTTTTTTTTTTT 37×T***
16026649-TGTGC-GGTGG 13914769-TGTGC-GGTGG ***
16314663-A-AT 14202783-A-AT 8×T***
19138172-T-TTA 17026292-T-TTA ***
13498123-CA-TG 11342447-CA-TG ***
13485435-TAAAG-AAAAT 11329759-TAAAG-AAAAT ***
19646396-TG-T 17534516-TG-T P5_Prx ***
13475454-CAAA-AAAG 11319778-CAAA-AAAG ***
13469013-GAAG-CAAC 11313337-GAAG-CAAC ***
13469045-AC-GG 11313369-AC-GG ***
13470633-GC-AT 11314957-GC-AT ***
13470649-TGG-GGA 11314973-TGG-GGA ***
13470657-TCT-CGA 11314981-TCT-CGA ***
13473096-AG-TA 11317420-AG-TA ***
13480154-TCCCCGTCTAGGC-CGCCCTTGTGGGG 11324478-TCCCCGTCTAGGC-CGCCCTTGTGGGG ***
13485412-TGCCGTA-AGCCTTG 11329736-TGCCGTA-AGCCTTG ***
13480177-GAAGAGTCC-TAAATGTTA 11324501-GAAGAGTCC-TAAATGTTA ***
13481949-TCCTA-ACATG 11326273-TCCTA-ACATG ***
13482969-TATAGAGAAGAGTCCT-CCTAGACAAGAGTTAC 11327293-TATAGAGAAGAGTCCT-CCTAGACAAGAGTTAC ***
13483020-TGC-AG 11327344-TGC-AG ***
13483145-GATAC-AATAT 11327469-GATAC-AATAT ***
13483619-CAGAGTTA-GAGATATC 11327943-CAGAGTTA-GAGATATC ***
13485342-CAA-AAAT 11329666-CAA-AAAT ***
19646362-ACTTAGTAT-TGTTATCAG 17534482-ACTTAGTAT-TGTTATCAG P5_Prx ***
20989148-CACACACATAT-C 18827262-CACACACATAT-C P4_Dst ***
13466964-TAGAC-GAGAG 11311288-TAGAC-GAGAG ***
58843694-GC-CG 56747176-GC-CG ***
25896670-CT-C 23750523-CT-C P1_Y1 ***
25896675-TATGA-AAAG 23750528-TATGA-AAAG P1_Y1 ***
25896685-GAGGGGCTTATCATAGATTCA-G 23750538-GAGGGGCTTATCATAGATTCA-G P1_Y1 ***
25896709-TTCATAA-CC 23750562-TTCATAA-CC P1_Y1 ***
58822239-TTT-GTC 56768630-AAA-GAC ***
58840473-GTCAATTCCT-TTGCATTACA 56750389-AGGAATTGAC-TGTAATGCAA ***
58847217-GCC-AAT 56743652-GGC-ATT ***
25896647-ATC-A 23750500-ATC-A P1_Y1 ***
58861791-GATGC-TATGA 56729076-GCATC-TCATA ***
58861963-T-TAGA 56728907-A-ATCT ***
58861976-ATC-GAT 56728893-GAT-ATC ***
58891342-ATAGCATTCCATTG-A 56699515-GCAATGGAATGCTA-G ***
58910228-CAT-TATC 56680641-ATG-GATA ***
58910250-ATCC-CTCT 56680618-GGAT-AGAG ***
58991269-CTGGGC-GTTGGA 56845122-CTGGGC-GTTGGA ***
25896654-ACCAACAGTAGTGG-TGCAA 23750507-ACCAACAGTAGTGG-TGCAA P1_Y1 ***
23832825-TTTT-CTCC 21670939-TTTT-CTCC ***
21099740-C-CTT 18937854-C-CTT 16×T***
22236518-GATGG-TAAGA 20074632-GATGG-TAAGA DYZ19 ***
21234907-AG-GA 19073021-AG-GA ***
21283663-C-CT 19121777-C-CT ***
21283667-TTG-T 19121781-TTG-T ***
21477273-TCATC-T 19315387-TCATC-T ***
21477280-T-TC 19315394-T-TC ***
22234444-AA-TG 20072558-AA-TG DYZ19 ***
22235000-AAT-CAC 20073114-AAT-CAC DYZ19 ***
22245707-ACTC-CCT 20083821-ACTC-CCT DYZ19 ***
23253920-ACATC-GATCT 21092034-ACATC-GATCT ***
22250340-ACAA-GCAC 20088454-ACAA-GCAC DYZ19 ***
22251566-ATTTAG-CCTCAC 20089680-ATTTAG-CCTCAC DYZ19 ***
22292139-TTCC-CTCT 20130253-TTCC-CTCT DYZ19 ***
22344147-TGG-CGA 20182261-TGG-CGA DYZ19 ***
22362678-ACG-TCA 20200792-ACG-TCA DYZ19 ***
22703626-GAAAGAAAG-AAAAAAAAA 20541740-GAAAGAAAG-AAAAAAAAA ***
22756598-TGTG-CA 20594712-TGTG-CA ***
13466988-CGG-TGA 11311312-CGG-TGA ***
13461835-CA-TG 11306159-CA-TG ***
58843760-C-T 56747111-G-A ***
58889913-C-G 56700958-G-C ***
58877055-C-T 56713816-G-A ***
58883915-C-A 56706956-G-T ***
58883917-G-T 56706954-C-A ***
58889830-C-T 56701041-G-A ***
58889891-C-T 56700980-G-A ***
58889908-T-A 56700963-A-T ***
58889915-C-T 56700956-G-A ***
58872491-C-G 56718380-G-C ***
58889921-C-A 56700950-G-T ***
58889922-G-T 56700949-C-A ***
58889930-C-T 56700941-G-A ***
58890749-C-T 56700122-G-A ***
58890760-C-T 56700111-G-A ***
58890764-T-A 56700107-A-T ***
58895456-C-G 56695415-G-C ***
58872506-C-G 56718365-G-C ***
58872437-C-T 56718434-G-A ***
58898137-A-T 56692734-T-A ***
58848565-G-T 56742306-C-A ***
58846760-C-T 56744111-G-A ***
58846765-C-G 56744106-G-C ***
58846767-T-G 56744104-A-C ***
58846769-A-G 56744102-T-C ***
58847150-C-T 56743721-G-A ***
58847213-T-G 56743658-A-C ***
58848499-G-T 56742372-C-A ***
20449442-C-A 18287556-C-A P5_Dst ***
58872436-A-C 56718435-T-G ***
58851847-C-T 56739024-G-A ***
58852260-C-A 56738611-G-T ***
58856588-T-A 56734283-A-T ***
58859196-G-T 56731675-C-A ***
58862508-C-T 56728363-G-A ***
58870754-T-C 56720117-A-G ***
58872259-C-A 56718612-G-T 4×CCATT***
58895457-G-C 56695414-C-G ***
58898139-C-A 56692732-G-T ***
13461328-GC-TG 11305652-GC-TG ***
10070376-AG-TT 10232767-AG-TT ***
6454448-G-GAAAAAA 6586407-G-GAAAAAA 12×A***
7131385-GACCCC-G 7263344-GACCCC-G ***
9956357-CGCC-TGCA 10118748-CGCC-TGCA ***
10022394-TTAGT-CTAGC 10184785-TTAGT-CTAGC ***
10029194-CA-C 10191585-CA-C ***
10030599-TAGC-AAGT 10192990-TAGC-AAGT ***
10102432-TGC-T 10264823-TGC-T ***
4287922-G-GA 4419881-G-GA 9×A***
10102448-AA-TG 10264839-AA-TG ***
13138697-ACTAGG-A 10628183-ACTAGG-A ***
13138718-TTGTATTCCATCCCAT-C 10628204-TTGTATTCCATCCCAT-C ***
13140070-ACTCGAGTGCGTGTGATTC-A 10629556-ACTCGAGTGCGTGTGATTC-A ***
13143949-GA-CC 10633435-GA-CC ***
13252700-AG-A 11097024-AG-A ***
13441070-CA-TG 11285394-CA-TG ***
6005086-ATGAAC-CCGATCT 6137045-ATGAAC-CCGATCT ***
3869133-TG-CA 4001092-TG-CA ***
58905733-T-A 56685138-A-T ***
58995232-T-A 56849085-T-A ***
58907097-T-G 56683774-A-C ***
58907101-A-T 56683770-T-A ***
58910495-A-T 56680376-T-A ***
58911306-T-C 56679565-A-G ***
58995224-G-T 56849077-G-T ***
58995227-G-T 56849080-G-T ***
58995231-C-A 56849084-C-A ***
6634275-G-TT 6766234-G-TT ***
2747782-AATAAAT-TAAATAA 2879741-AATAAAT-TAAATAA ***
13307318-CTG-ATA 11151642-CTG-ATA ***
19138349-CTATA-C 17026469-CTATA-C 11×TA***
10008082-GA-AC 10170473-GA-AC ***
13487241-GGCAGC-CGGAGG 11331565-GGCAGC-CGGAGG ***
5486154-TATATTATA-T 5618113-TATATTATA-T ***
3765760-C-CA 3897719-C-CA 12×A***
4651422-G-GA 4783381-G-GA 11×A***
20530693-A-T 18368807-A-T P5_Dst ***
19646368-T-C 17534488-T-C P5_Prx ***
20449429-T-C 18287543-T-C P5_Dst ***
6234133-T-A 6366092-T-A IR3_Dst ***
5804885-C-T 5936844-C-T ***
6009402-A-T 6141361-A-T ***
6040942-C-A 6172901-C-A ***
6160955-G-A 6292914-G-A IR3_Dst ***
6234131-T-A 6366090-T-A IR3_Dst ***
6234132-G-A 6366091-G-A IR3_Dst ***
6234137-T-A 6366096-T-A IR3_Dst ***
5703107-C-G 5835066-C-G ***
6234158-T-G 6366117-T-G IR3_Dst ***
6234159-G-A 6366118-G-A IR3_Dst ***
6234170-G-A 6366129-G-A IR3_Dst ***
6314480-A-G 6446439-A-G IR3_Dst ***
6323176-C-A 6455135-C-A IR3_Dst ***
6323213-G-A 6455172-G-A IR3_Dst ***
5741120-G-T 5873079-G-T ***
5703106-A-T 5835065-A-T ***
6602932-T-A 6734891-T-A ***
3567156-T-A 3699115-T-A ***
13517206-T-A 11361530-T-A ***
13481642-G-A 11325966-G-A ***
13469218-G-A 11313542-G-A ***
2824726-A-G 2956685-A-G 10×C***
3170471-G-T 3302430-G-T ***
3461669-T-A 3593628-T-A ***
3739393-G-A 3871352-G-A ***
5365135-C-T 5497094-C-T ***
3754500-G-T 3886459-G-T ***
3823789-G-T 3955748-G-T ***
4289146-A-T 4421105-A-T ***
5073702-A-T 5205661-A-T 10×AT***
5074450-G-T 5206409-G-T ***
5207478-T-C 5339437-T-C ***
5224894-G-A 5356853-G-A ***
6410906-T-C 6542865-T-C ***
6723435-C-T 6855394-C-T ***
13481650-T-G 11325974-T-G ***
9919964-G-C 10082355-G-C ***
9564499-T-A 9726890-T-A IR3_Prx ***
9564507-G-T 9726898-G-T IR3_Prx ***
9919946-A-T 10082337-A-T ***
9919953-A-G 10082344-A-G ***
9919955-T-G 10082346-T-G ***
9919957-C-A 10082348-C-A ***
9919967-A-C 10082358-A-C ***
9564480-T-A 9726871-T-A IR3_Prx ***
9956357-C-T 10118748-C-T ***
9956360-C-A 10118751-C-A ***
9962654-A-T 10125045-A-T ***
9998702-G-A 10161093-G-A ***
10022421-T-G 10184812-T-G ***
10029433-T-C 10191824-T-C ***
9564486-G-A 9726877-G-A IR3_Prx ***
9492476-T-C 9654867-T-C ***
7118697-G-C 7250656-G-C ***
7394875-A-C 7526834-A-C ***
7119069-C-A 7251028-C-A ***
7275852-G-T 7407811-G-T ***
7383748-G-A 7515707-G-A ***
7394825-G-A 7526784-G-A ***
7394863-A-G 7526822-A-G ***
7394867-A-C 7526826-A-C ***
7439322-G-T 7571281-G-T ***
9487021-G-T 9649412-G-T ***
8065425-A-G 8197384-A-G ***
8277891-T-C 8409850-T-C ***
8293293-T-C 8425252-T-C ***
8293294-C-G 8425253-C-G ***
9183311-C-T 9345702-C-T ***
9354636-T-G 9517027-T-G ***
9354643-T-G 9517034-T-G ***
22343182-T-A 20181296-T-A DYZ19 ***
10048537-C-G 10210928-C-G ***
10058533-C-T 10220924-C-T ***
10022316-C-CTAAATAAA 10184707-C-CTAAATAAA 5×TAAA***
13425683-A-G 11270007-A-G ***
58840628-GGCCT-TGCCA 56750239-AGGCC-TGGCA ***
13203980-TC-AT 11048304-TC-AT ***
10029485-G-C 10191876-G-C ***
13483226-TAC-AG 11327550-TAC-AG ***
58889848-G-C 56701023-C-G ***
13583879-G-A 11428203-G-A ***
13110828-T-A 10600314-T-A ***
10102438-C-A 10264829-C-A ***
10102448-A-T 10264839-A-T ***
58874441-ATCCC-TTCCT 56716426-GGGAT-AGGAA ***
13251608-T-C 11095932-T-C ***
18141280-A-T 16029400-A-T ***
22344147-T-C 20182261-T-C DYZ19 ***
22252956-TACGT-AGTGG 20091070-TACGT-AGTGG DYZ19 ***
58843740-A-C 56747131-T-G ***
58889834-A-T 56701037-T-A ***
22263796-C-T 20101910-C-T DYZ19 ***
58898602-T-G 56692269-A-C ***
19646370-T-G 17534490-T-G P5_Prx ***
22251569-T-C 20089683-T-C DYZ19 ***
22251571-G-C 20089685-G-C DYZ19 ***
22251587-C-T 20089701-C-T DYZ19 ***
13516442-A-T 11360766-A-T ***
58843734-T-C 56747137-A-G ***
22366768-C-T 20204882-C-T DYZ19 ***
58877064-A-T 56713807-T-A ***
13312196-CAC-TGT 11156520-CAC-TGT ***
13470854-TT-CC 11315178-TT-CC ***
13469234-T-G 11313558-T-G ***
22311335-T-A 20149449-T-A DYZ19 ***
14258396-A-T 12137690-A-T ***
22360419-G-A 20198533-G-A DYZ19 ***
58889804-G-T 56701067-C-A ***
58898168-C-T 56692703-G-A ***
13530026-A-G 11374350-A-G ***
13530010-G-A 11374334-G-A ***
58995218-C-T 56849071-C-T ***
10048536-C-T 10210927-C-T Z26369 ***
16352478-C-A 14240598-C-A ***
13469222-T-G 11313546-T-G ***
9956329-C-G 10118720-C-G ***
58891312-T-A 56699559-A-T ***
16026706-C-T 13914826-C-T Z9248 ***
58995123-A-T 56848976-A-T ***
10052412-T-G 10214803-T-G ***
22307179-A-T 20145293-A-T DYZ19 ***
13469217-T-C 11313541-T-C ***
13469225-T-C 11313549-T-C ***
13459766-T-A 11304090-T-A ***
13462105-A-T 11306429-A-T ***
14523372-A-G 12411573-A-G ***
10029422-A-C 10191813-A-C ***
58907249-T-C 56683622-A-G ***
58872322-AT-TA 56718548-AT-TA ***
19071530-A-T 16959650-A-T ***
19071532-A-G 16959652-A-G ***
19071546-G-A 16959666-G-A ***
22234917-G-A 20073031-G-A DYZ19 ***
58848554-T-A 56742317-A-T ***
58847150-CAGTG-TAATA 56743717-CACTG-TATTA ***
58994250-GC-CG 56848103-GC-CG ***
58846736-AC-A 56744133-AG-A ***
19646343-T-A 17534463-T-A P5_Prx ***
58861785-C-A 56729086-G-T ***
4420418-C-CT 4552377-C-CT 13×T***
58870585-TTAATTCGAG-CT 56720277-CTCGAATTAA-AG ***
10090758-G-T 10253149-G-T ***
24686428-C-CTTTTTTTG 22540281-C-CTTTTTTTG P3_b2 23×T***
22234964-CAAGG-TAAAT 20073078-CAAGG-TAAAT DYZ19 ***
10029473-A-C 10191864-A-C ***
10060205-A-T 10222596-A-T ***
20449425-T-A 18287539-T-A P5_Dst ***
16897667-G-A 14785787-G-A ***
16026621-G-A 13914741-G-A ***
16026666-T-G 13914786-T-G ***
16081182-T-C 13969302-T-C ***
16215824-C-T 14103944-C-T ***
16618081-T-C 14506201-T-C ***
16684553-G-C 14572673-G-C ***
16981868-C-T 14869988-C-T ***
15943218-G-T 13831338-G-T ***
16996825-G-T 14884945-G-T ***
17090874-A-G 14978994-A-G ***
17542026-A-T 15430146-A-T ***
17542043-T-C 15430163-T-C ***
17588684-A-G 15476804-A-G ***
17614887-T-C 15503007-T-C ***
16025613-C-A 13913733-C-A ***
15936811-A-C 13824931-A-C ***
18480063-T-G 16368183-T-G P6_Dst ***
15294119-A-C 13182218-A-C ***
15243652-C-A 13131738-C-A ***
15292522-A-T 13180621-A-T ***
15294010-G-A 13182109-G-A ***
15294105-C-T 13182204-C-T ***
15294107-G-T 13182206-G-T ***
15294118-T-C 13182217-T-C ***
15294123-A-T 13182222-A-T ***
15883292-T-C 13771412-T-C ***
15294132-T-A 13182231-T-A ***
15296387-C-T 13184486-C-T ***
15462766-G-A 13350886-G-A ***
15626689-T-C 13514809-T-C ***
15637374-G-A 13525494-G-A ***
15883235-C-T 13771355-C-T ***
15883279-A-G 13771399-A-G ***
18296289-A-G 16184409-A-G P6_Prx ***
18542356-G-T 16430476-G-T ***
15118498-C-T 13006585-C-T ***
20331782-C-A 18169896-C-A P5_Dst ***
20057511-A-G 17945631-A-G P5_Prx ***
20057526-C-T 17945646-C-T P5_Prx ***
20074248-C-T 17962368-C-T P5_Dst ***
20074280-A-G 17962400-A-G P5_Dst ***
20275705-G-T 18113819-G-T P5_Dst ***
20275711-C-A 18113825-C-A P5_Dst ***
20331789-C-A 18169903-C-A P5_Dst ***
19690122-A-T 17578242-A-T P5_Prx ***
20331794-C-A 18169908-C-A P5_Dst ***
20331799-G-A 18169913-G-A P5_Dst ***
20425854-A-G 18263968-A-G P5_Dst ***
20449401-A-T 18287515-A-T P5_Dst ***
20449402-A-T 18287516-A-T P5_Dst ***
20449406-A-T 18287520-A-T P5_Dst ***
19800729-C-A 17688849-C-A P5_Prx ***
13701149-T-G 11545473-T-G ***
18710153-T-C 16598273-T-C ***
19377209-A-G 17265329-A-G 4×GAGG***
18798775-G-T 16686895-G-T ***
19028750-C-G 16916870-C-G ***
19098301-T-C 16986421-T-C ***
19377186-A-G 17265306-A-G ***
19377190-A-G 17265310-A-G ***
19377198-A-G 17265318-A-G ***
19377228-A-G 17265348-A-G ***
19646362-A-T 17534482-A-T P5_Prx ***
19377232-A-G 17265352-A-G ***
19377237-A-G 17265357-A-G ***
19377238-A-C 17265358-A-C ***
19377296-G-C 17265416-G-C ***
19377299-G-A 17265419-G-A ***
19377300-G-A 17265420-G-A ***
19386653-T-C 17274773-T-C ***
15152317-A-T 13040404-G-T ***
15118492-C-T 13006579-C-T ***
10065597-T-G 10227988-T-G ***
13441077-T-G 11285401-T-G ***
13337397-T-C 11181721-T-C ***
13346797-A-C 11191121-A-C ***
13346802-C-T 11191126-C-T ***
13411406-C-G 11255730-C-G ***
13425950-C-T 11270274-C-T ***
13441016-G-A 11285340-G-A ***
13461426-C-G 11305750-C-G ***
13256682-C-G 11101006-C-G ***
13462106-C-G 11306430-C-G ***
13463878-G-T 11308202-G-T ***
13466977-C-A 11311301-C-A ***
13467012-A-G 11311336-A-G ***
13467191-G-C 11311515-G-C ***
13467199-G-T 11311523-G-T ***
13256938-C-T 11101262-C-T ***
13256626-C-T 11100950-C-T ***
13469338-A-T 11313662-A-T ***
13110829-C-A 10600315-C-A ***
10065607-G-A 10227998-G-A ***
10065647-C-G 10228038-C-G ***
10083971-T-A 10246362-T-A ***
10083979-T-C 10246370-T-C ***
13110062-A-C 10599548-A-C ***
13110515-T-C 10600001-T-C ***
13110840-T-A 10600326-T-A ***
13251349-T-G 11095673-T-G ***
13110841-T-G 10600327-T-G ***
13110844-C-G 10600330-C-G ***
13114486-T-A 10603972-T-A ***
13125716-A-T 10615202-A-T ***
13125721-C-A 10615207-C-A ***
13223696-G-A 11068020-G-A ***
13249633-A-G 11093957-A-G ***
13469027-C-A 11313351-C-A ***
13470627-C-T 11314951-C-T ***
15118421-G-T 13006508-G-T ***
13725255-C-T 11569579-C-T ***
13595000-T-C 11439324-T-C ***
13699983-T-A 11544307-T-A ***
13700053-A-T 11544377-A-T A2713 ***
13700124-T-C 11544448-T-C A3814 ***
13701122-T-A 11545446-T-A ***
13701809-T-G 11546133-T-G ***
13741117-G-A 11585441-G-A ***
13535673-A-G 11379997-A-G ***
13832632-C-G 11711926-C-G ***
13832633-A-G 11711927-A-G ***
13832636-C-T 11711930-C-T ***
14166017-G-A 12045311-G-A ***
14204662-A-G 12083956-A-G ***
15118413-A-C 13006500-A-C ***
13561802-A-G 11406126-A-G ***
13531645-G-A 11375969-G-A ***
13470651-G-A 11314975-G-A ***
13481355-G-T 11325679-G-T ***
13470668-C-G 11314992-C-G ***
13470706-G-A 11315030-G-A ***
13470739-C-A 11315063-C-A ***
13475930-T-A 11320254-T-A ***
13476354-G-T 11320678-G-T ***
13480894-A-G 11325218-A-G ***
13481386-A-T 11325710-A-T ***
13531157-A-T 11375481-A-T ***
13481819-G-A 11326143-G-A ***
13481959-G-T 11326283-G-T ***
13482953-C-G 11327277-C-G ***
13482970-A-C 11327294-A-C ***
13485404-T-G 11329728-T-G ***
13487791-T-C 11332115-T-C ***
13506141-T-G 11350465-T-G ***
59013641-TTTTTTT-ATATATA 56867494-TTTTTTT-ATATATA ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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