Tree Position

R-P312/S116 > Z40481 > ZZ37 > L624/S389 > Z30600

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
191094
BigY2
191094
19881736-A-T 17769856-A-T P5_Prx ***A*
19646155-C-G 17534275-C-G P5_Prx ***A*
13450246-T-C 11294570-T-C A*
18313643-A-G 16201763-A-G P6_Prx ***A*
22231808-C-A 20069922-C-A DYZ19 ***A*
28816713-G-A 26670566-G-A A*
18370594-A-G 16258714-A-G P6_Prx ***A*
6207441-A-C 6339400-A-C IR3_Dst ***A*
7126823-G-A 7258782-G-A BY19348 Y++
16861514-T-C 14749634-T-C YY++
8491162-C-T 8623121-C-T YY++
4902725-C-A 5034684-C-A Z7102 Y12181 F9182 **+
22473253-C-A 20311367-C-A DYZ19 ***+
14146360-C-G 12025654-C-G YY++
5420717-A-G 5552676-A-G +
14195566-G-A 12074860-G-A Y**+
8355979-C-T 8487938-C-T YY++
22732238-T-C 20570352-T-C YY++
8505610-G-A 8637569-G-A YY++
8595803-T-A 8727762-T-A YY++
9871665-T-TAC 10034056-T-TAC 8×AC+*
23197806-T-G 21035920-T-G Y++
13472658-A-G 11316982-A-G ***+
13644262-GATTCA-G 11488586-GATTCA-G +***
23476395-G-A 21314509-G-A YY++
13700121-G-C 11544445-G-C ***+
13717631-T-G 11561955-T-G +**
14198693-A-T 12077987-A-T YY++
14763373-G-A 12651442-G-A YY++
23959378-G-T 21813231-G-T Y++
17599771-A-G 15487891-A-G YY++
22246273-C-G 20084387-C-G DYZ19 +
10974-C-G +
22066298-G-A 19904412-G-A YY++
19914943-C-A 17803063-C-A P5_Prx +
19341522-C-T 17229642-C-T YY++
18068033-A-G 15956153-A-G YY++
18025135-A-G 15913255-A-G Y++
14906787-A-G 12794854-A-G YY++
17873007-G-A 15761127-G-A FGC26984 YY++
17446817-G-T 15334937-G-T YY+
17113710-CA-C 15001830-CA-C ++
22439159-G-T 20277273-G-T DYZ19 +**
16359945-A-G 14248065-A-G YY++
22441037-T-C 20279151-T-C DYZ19 ++
15224643-C-G 13112729-C-G Y++
14974755-G-A 12862830-G-A PR5311 YY++
22298783-T-C 20136897-T-C DYZ19 ****
22255639-C-A 20093753-C-A DYZ19 ****
17128593-T-G 15016713-T-G **
17098973-G-T 14987093-G-T **
17097059-GT-G 14985179-GT-G **
17125075-T-G 15013195-T-G **
17125158-TA-T 15013278-TA-T 11×A**
17090329-C-A 14978449-C-A **
16982613-C-A 14870733-C-A **
17085964-T-G 14974084-T-G **
16417468-C-A 14305588-C-A **
16605734-C-A 14493854-C-A **
16538784-C-A 14426904-C-A **
16514512-T-G 14402632-T-G **
16507931-A-C 14396051-A-C **
16502565-A-C 14390685-A-C **
16463530-G-T 14351650-G-T **
16454611-C-A 14342731-C-A **
16417455-C-A 14305575-C-A **
16627739-T-C 14515859-T-C **
16412549-C-A 14300669-C-A **
16412509-T-G 14300629-T-G **
16336949-C-A 14225069-C-A **
16336081-T-C 14224201-T-C **
16277908-C-A 14166028-C-A **
16188830-G-T 14076950-G-T **
16175262-C-A 14063382-C-A **
16623970-G-T 14512090-G-T **
16666968-A-C 14555088-A-C **
17063799-G-T 14951919-G-T **
16874842-A-G 14762962-A-G **
17046289-T-C 14934409-T-C **
17012982-C-A 14901102-C-A **
16993420-A-C 14881540-A-C **
16943462-G-T 14831582-G-T **
16914209-T-C 14802329-T-C **
16885258-T-C 14773378-T-C **
16885093-C-G 14773213-C-G **
16866078-C-A 14754198-C-A **
16679942-G-C 14568062-G-C **
16842186-G-T 14730306-G-T **
16779142-T-C 14667262-T-C **
16729492-C-A 14617612-C-A **
16721225-G-T 14609345-G-T **
16717322-A-C 14605442-A-C **
16710216-T-A 14598336-T-A **
16691362-C-A 14579482-C-A **
17128672-T-A 15016792-T-A **
16531-A-C **
17142137-A-G 15030257-A-G **
17981998-C-A 15870118-C-A **
17715457-A-C 15603577-A-C **
17760504-C-A 15648624-C-A **
17830612-TG-T 15718732-TG-T **
17860210-C-A 15748330-C-A **
17864105-T-G 15752225-T-G **
17883706-C-A 15771826-C-A **
17918776-C-A 15806896-C-A **
17918813-G-A 15806933-G-A **
17947110-G-A 15835230-G-A **
17950825-A-T 15838945-A-T 27×AT**
17978346-C-A 15866466-C-A **
18055259-C-A 15943379-C-A **
17638659-T-G 15526779-T-G **
18088362-A-T 15976482-A-T **
18174937-C-A 16063057-C-A **
18186797-T-G 16074917-T-G **
18186803-G-C 16074923-G-C **
18186825-G-T 16074945-G-T **
18249883-G-T 16138003-G-T **
18266272-G-T 16154392-G-T **
18266313-G-T 16154433-G-T **
18275130-G-T 16163250-G-T P6_Prx **
18325702-T-A 16213822-T-A P6_Prx **
18361509-G-A 16249629-G-A P6_Prx **
17648233-C-A 15536353-C-A **
17598020-G-T 15486140-G-T **
17142154-C-A 15030274-C-A **
17383690-T-G 15271810-T-G **
17170386-C-T 15058506-C-T **
16052898-T-C 13941018-T-C **
17218236-T-C 15106356-T-C **
17225816-C-A 15113936-C-A **
17228457-C-A 15116577-C-A **
17231331-T-G 15119451-T-G **
17284592-G-A 15172712-G-A **
17284599-G-A 15172719-G-A **
17318927-C-A 15207047-C-A **
17369276-G-A 15257396-G-A **
17369369-A-C 15257489-A-C **
17385222-T-A 15273342-T-A **
17576087-C-A 15464207-C-A **
17386751-G-T 15274871-G-T **
17402523-A-C 15290643-A-C **
17413363-C-A 15301483-C-A **
17421061-T-C 15309181-T-C **
17444895-G-T 15333015-G-T **
17461961-C-A 15350081-C-A **
17479955-C-A 15368075-C-A **
17482979-C-T 15371099-C-T **
17501112-G-T 15389232-G-T **
17502345-G-T 15390465-G-T **
17503608-G-T 15391728-G-T **
17515465-T-C 15403585-T-C **
16084383-C-A 13972503-C-A **
15368722-T-G 13256842-T-G **
15974964-T-C 13863084-T-C **
14509504-G-T 12397709-G-T **
14384958-G-T 12264254-G-T **
14424223-A-G 12303498-A-G Y91395 **
14440117-C-A 12319390-C-A **
14440629-T-C 12319902-T-C **
14458075-C-A 12337348-C-A **
14461265-G-T 12340538-G-T **
14499506-A-G 12387711-A-G **
14503918-A-G 12392123-A-G **
14506709-A-C 12394914-A-C **
14509441-C-A 12397646-C-A **
14511218-C-A 12399423-C-A **
14380839-C-A 12260135-C-A **
14511239-C-A 12399444-C-A **
14514916-G-T 12403121-G-T **
14522195-C-A 12410396-C-A **
14526769-A-C 12414970-A-C **
14558577-C-A 12446778-C-A **
14571265-C-A 12459465-C-A **
14574136-C-A 12462336-C-A **
14596236-C-T 12484436-C-T **
14653187-C-A 12541252-C-A **
14697067-A-C 12585133-A-C **
14384918-G-T 12264214-G-T **
14352866-TG-T 12232161-TG-T **
14703415-A-C 12591481-A-C **
14106777-C-T 11986071-C-T **
14022980-G-T 11902274-G-T **
14038002-C-A 11917296-C-A **
14048901-A-G 11928195-A-G **
14050736-C-A 11930030-C-A **
14053451-G-GA 11932745-G-GA 8×A**
14070124-T-C 11949418-T-C **
14073110-C-G 11952404-C-G **
14073915-C-A 11953209-C-A **
14089683-C-G 11968977-C-G **
14100448-G-T 11979742-G-T **
14128188-C-A 12007482-C-A **
14312193-C-A 12191487-C-A **
14142561-C-A 12021855-C-A **
14159596-A-G 12038890-A-G **
14176572-C-A 12055866-C-A **
14190199-C-T 12069493-C-T **
14214351-C-A 12093645-C-A **
14217229-C-A 12096523-C-A **
14228610-C-A 12107904-C-A **
14235837-C-T 12115131-C-T **
14251588-C-T 12130882-C-T **
14283230-C-A 12162524-C-A **
14697068-C-T 12585134-C-T **
14757150-C-A 12645219-C-A **
15928427-G-A 13816547-G-A **
15653416-T-C 13541536-T-C **
18365604-C-A 16253724-C-A P6_Prx **
15369148-A-C 13257268-A-C **
15406677-C-A 13294797-C-A **
15422843-C-T 13310963-C-T **
15496930-C-A 13385050-C-A **
15583506-C-A 13471626-C-A **
15593061-C-A 13481181-C-A **
15622354-G-C 13510474-G-C **
15626656-C-A 13514776-C-A **
15648030-C-A 13536150-C-A **
15677373-G-A 13565493-G-A **
15280848-A-G 13168947-A-G **
15682756-C-A 13570876-C-A **
15684743-T-A 13572863-T-A **
15687775-C-A 13575895-C-A **
15698459-C-A 13586579-C-A **
15718919-C-A 13607039-C-A **
15753254-C-A 13641374-C-A **
15770276-G-T 13658396-G-T **
15775770-T-C 13663890-T-C **
15915089-C-A 13803209-C-A **
15916640-C-A 13804760-C-A **
15288150-C-T 13176249-C-T **
15202265-AT-A 13090351-AT-A **
14821748-C-A 12709815-C-A **
15041046-GTA-G 12929136-GTA-G **
14824160-C-A 12712227-C-A **
14846828-A-C 12734894-A-C **
14854402-T-G 12742468-T-G **
14873131-C-G 12761201-C-G **
14931822-A-C 12819887-A-C **
14949079-C-A 12837153-C-A **
15038446-G-T 12926536-G-T **
15041008-G-A 12929098-G-A **
15041022-T-C 12929112-T-C **
15041044-C-T 12929134-C-T **
15041051-G-CACA 12929141-G-CACA **
15138072-C-G 13026159-C-G **
15041055-G-A 12929145-G-A **
15041056-A-T 12929146-A-T **
15041070-T-C 12929160-T-C **
15050056-C-A 12938147-C-A **
15061676-A-C 12949768-A-C **
15065838-A-C 12953930-A-C **
15073084-A-T 12961174-A-T **
15084680-A-G 12972770-A-G **
15109642-C-A 12997729-C-A **
15131855-C-A 13019942-C-A **
15137840-C-A 13025927-C-A **
18361520-G-A 16249640-G-A P6_Prx **
18996514-C-A 16884634-C-A **
18388229-T-C 16276349-T-C P6_Gap **
23294137-C-A 21132251-C-A **
23006717-G-T 20844831-G-T **
23007344-G-T 20845458-G-T **
23041170-C-A 20879284-C-A **
23044213-C-A 20882327-C-A **
23049708-AAT-A 20887822-AAT-A **
23064933-C-A 20903047-C-A **
23098081-G-T 20936195-G-T **
23186235-T-C 21024349-T-C **
23205442-G-T 21043556-G-T **
23225352-C-A 21063466-C-A **
23333955-A-G 21172069-A-G **
22912657-C-T 20750771-C-T **
23341479-A-G 21179593-A-G **
23355131-C-A 21193245-C-A **
23376849-G-A 21214963-G-A **
23434297-C-A 21272411-C-A **
23476291-A-T 21314405-A-T **
23483525-G-T 21321639-G-T **
23521058-A-C 21359172-A-C **
23579480-G-T 21417594-G-T **
23579484-T-G 21417598-T-G **
23623186-G-C 21461300-G-C **
22936374-C-T 20774488-C-T **
22888073-C-A 20726187-C-A **
23697527-A-C 21535641-A-C **
22268517-C-CAAGA 20106631-C-CAAGA DYZ19 **
21792171-C-A 19630285-C-A **
21890929-C-A 19729043-C-A **
22013146-T-G 19851260-T-G **
22014095-A-C 19852209-A-C **
22014123-C-A 19852237-C-A **
22073864-C-A 19911978-C-A **
22076332-C-G 19914446-C-G **
22101001-TCA-T 19939115-TCA-T **
22170694-T-C 20008808-T-C **
22199363-A-G 20037477-A-G **
22322635-TG-T 20160749-TG-T DYZ19 **
22876428-C-A 20714542-C-A **
22335161-T-C 20173275-T-C DYZ19 **
22426908-G-T 20265022-G-T DYZ19 **
22449678-C-A 20287792-C-A DYZ19 **
22484710-C-T 20322824-C-T DYZ19 **
22527239-C-A 20365353-C-A **
22611245-C-A 20449359-C-A **
22787288-A-G 20625402-A-G **
22808736-A-C 20646850-A-C **
22833762-C-A 20671876-C-A **
22864401-C-A 20702515-C-A **
23648182-C-A 21486296-C-A **
23741873-C-A 21579987-C-A FGC67851 **
21747637-G-A 19585751-G-A **
28800653-T-C 26654506-T-C **
27864368-T-TCA 25718221-T-TCA P1_Y2 **
28484832-G-T 26338685-G-T **
28505174-C-A 26359027-C-A **
28550001-C-A 26403854-C-A **
28636146-A-C 26489999-A-C **
28645391-C-A 26499244-C-A **
28658594-A-G 26512447-A-G **
28700865-G-A 26554718-G-A **
28719112-C-A 26572965-C-A **
28764447-G-T 26618300-G-T **
28801402-A-ATG 26655255-A-ATG **
27822115-A-C 25675968-A-C P1_Y2 **
28801413-G-C 26655266-G-C **
56823308-A-ATT **
56829953-C-A **
56838091-TC-T **
56846367-A-G **
56858076-G-T **
6896-A-G **
7048-G-T **
16505-T-CC **
16508-G-T **
27822126-A-AC 25675979-A-AC P1_Y2 **
27714032-T-TTA 25567885-T-TTA P1_Y2 **
23778059-C-A 21616173-C-A **
25466565-G-T 23320418-G-T P2_r2 **
23976618-G-T 21830471-G-T **
24212463-A-C 22066316-A-C P3_b1 **
24267227-ACAC-A 22121080-ACAC-A P3_b1 **
24364027-C-T 22217880-C-T **
24487634-T-G 22341487-T-G **
24626442-T-TC 22480295-T-TC P3_t2 **
24870053-A-C 22723906-A-C P3_b2 **
24875560-A-C 22729413-A-C g1 **
24971082-CTTT-C 22824935-CTTT-C g1 14×T**
25108999-T-A 22962852-T-A g1 **
25466583-G-T 23320436-G-T P2_r2 **
27484268-C-CTTTA 25338121-C-CTTTA P1_Y2 **
25994016-A-AG 23847869-A-AG P1_Y1 **
26010181-G-T 23864034-G-T P1_Y1 **
26066361-T-TC 23920214-T-TC P1_Y1 **
26152065-T-A 24005918-T-A P1_Y1 **
26152100-T-TCCC 24005953-T-TCCC P1_Y1 **
26152102-C-CT 24005955-C-CT P1_Y1 **
26152105-T-C 24005958-T-C A4476 P1_Y1 **
26152124-T-G 24005977-T-G P1_Y1 **
26153999-C-T 24007852-C-T P1_Y1 **
26400828-C-A 24254681-C-A P1_Y1 **
27423427-G-T 25277280-G-T P1_g3 **
21787294-T-A 19625408-T-A **
21744736-C-A 19582850-C-A **
18395807-G-T 16283927-G-T P6_Gap **
19264523-G-T 17152643-G-T **
19044676-A-G 16932796-A-G **
19066032-T-G 16954152-T-G **
19085370-CT-C 16973490-CT-C 8×T**
19156097-C-G 17044217-C-G **
19159852-G-T 17047972-G-T **
19162072-T-C 17050192-T-C **
19183972-G-T 17072092-G-T **
19183992-G-T 17072112-G-T **
19184592-C-A 17072712-C-A **
19248741-T-G 17136861-T-G **
19280792-C-A 17168912-C-A **
19044661-A-G 16932781-A-G **
19283697-T-C 17171817-T-C **
19362645-G-T 17250765-G-T **
19392928-A-C 17281048-A-C **
19403956-A-G 17292076-A-G **
19438576-G-T 17326696-G-T **
19460586-G-T 17348706-G-T **
19548333-C-A 17436453-C-A **
19558276-A-ATT 17446396-A-ATT 14×T**
19663331-G-A 17551451-G-A P5_Prx **
19746889-G-GTT 17635009-G-GTT P5_Prx **
19044670-C-T 16932790-C-T **
19044660-C-T 16932780-C-T **
19981875-T-C 17869995-T-C P5_Prx **
18695832-C-A 16583952-C-A **
18480013-T-G 16368133-T-G P6_Dst **
18554254-C-A 16442374-C-A **
18573427-A-G 16461547-A-G **
18629978-A-C 16518098-A-C **
18630607-A-C 16518727-A-C **
18630637-C-A 16518757-C-A **
18630780-C-A 16518900-C-A **
18653442-G-T 16541562-G-T **
18653455-G-T 16541575-G-T **
18653486-G-T 16541606-G-T **
18739601-C-G 16627721-C-G **
19034111-C-A 16922231-C-A **
18766705-C-A 16654825-C-A **
18776785-C-A 16664905-C-A **
18779426-G-T 16667546-G-T **
18838676-C-A 16726796-C-A **
18853524-T-G 16741644-T-G **
18859506-A-T 16747626-A-T **
18902802-A-G 16790922-A-G **
18902817-G-T 16790937-G-T **
18937245-A-C 16825365-A-C **
18996509-G-T 16884629-G-T **
13958882-C-A 11838176-C-A **
19948196-T-TTCTG 17836316-T-TTCTG P5_Prx **
20021522-A-T 17909642-A-T P5_Prx **
21738819-C-T 19576933-C-T **
21475952-C-A 19314066-C-A **
21269467-T-C 19107581-T-C **
21283375-G-T 19121489-G-T **
21320400-T-G 19158514-T-G **
21325877-T-G 19163991-T-G **
21328774-C-A 19166888-C-A **
21375523-C-A 19213637-C-A **
21394058-C-G 19232172-C-G **
21446289-C-T 19284403-C-T **
21460019-G-T 19298133-G-T **
21475932-C-A 19314046-C-A **
21511178-C-A 19349292-C-A **
21247750-C-A 19085864-C-A **
21574646-C-T 19412760-C-T **
21574652-T-G 19412766-T-G **
21582425-C-A 19420539-C-A **
21600705-C-A 19438819-C-A **
21632266-A-AT 19470380-A-AT **
21632358-A-C 19470472-A-C **
21658461-A-C 19496575-A-C **
21658494-C-A 19496608-C-A **
21666877-A-T 19504991-A-T **
21682179-C-A 19520293-C-A **
21265184-C-T 19103298-C-T **
21247670-A-G 19085784-A-G **
20021525-TATTTCC-T 17909645-TATTTCC-T P5_Prx **
20729664-A-ATTTTT 18567778-A-ATTTTT P4_Prx 12×T**
20021538-G-GTT 17909658-G-GTT P5_Prx 9×T**
20050977-T-C 17939097-T-C P5_Prx **
20105817-G-T 17993937-G-T P5_Dst **
20280155-C-CCTTA 18118269-C-CCTTA P5_Dst **
20330539-A-C 18168653-A-C P5_Dst **
20330551-C-A 18168665-C-A P5_Dst **
20473101-A-T 18311215-A-T P5_Dst 6×TGG**
20635019-G-GAT 18473133-G-GAT P4_Prx **
20654975-C-A 18493089-C-A P4_Prx **
20659365-C-A 18497479-C-A P4_Prx **
20794447-A-ATTT 18632561-A-ATTT P4_Prx 14×T**
21225097-AAAGCAAGTTT-A 19063211-AAAGCAAGTTT-A **
20888505-C-G 18726619-C-G P4_Dst **
20989103-A-C 18827217-A-C P4_Dst **
20989121-A-C 18827235-A-C P4_Dst **
21120143-C-A 18958257-C-A **
21125753-G-T 18963867-G-T **
21167424-C-A 19005538-C-A **
21196577-C-A 19034691-C-A **
21207082-T-C 19045196-T-C **
21211060-G-A 19049174-G-A **
21212407-G-T 19050521-G-T **
21220453-C-A 19058567-C-A **
13963464-G-T 11842758-G-T **
13900531-A-C 11779825-A-C **
13958867-A-T 11838161-A-T **
5887749-C-A 6019708-C-A **
5620758-T-G 5752717-T-G **
5622733-C-A 5754692-C-A **
5666078-T-C 5798037-T-C **
5679283-G-T 5811242-G-T **
5760629-C-A 5892588-C-A **
5765957-T-G 5897916-T-G **
5816871-C-A 5948830-C-A **
5887748-T-G 6019707-T-G **
5937168-C-A 6069127-C-A **
5548825-A-G 5680784-A-G **
5967232-T-C 6099191-T-C **
5967292-G-T 6099251-G-T **
5969691-G-C 6101650-G-C **
6147507-G-T 6279466-G-T IR3_Dst **
6149797-A-C 6281756-A-C IR3_Dst **
6435662-C-A 6567621-C-A **
6454578-C-A 6586537-C-A **
6531630-C-A 6663589-C-A **
5620285-C-A 5752244-C-A **
5495516-C-A 5627475-C-A **
6610037-G-T 6741996-G-T **
4961563-C-T 5093522-C-T **
4756723-C-A 4888682-C-A **
4763149-C-T 4895108-C-T **
4763254-T-G 4895213-T-G **
4861967-C-A 4993926-C-A **
4871782-A-G 5003741-A-G **
4918502-A-T 5050461-A-T **
4920492-T-G 5052451-T-G **
4920978-A-C 5052937-A-C **
4968324-A-G 5100283-A-G **
5432521-G-T 5564480-G-T **
5004486-C-A 5136445-C-A **
5052518-G-T 5184477-G-T **
5171708-G-T 5303667-G-T **
5171741-T-G 5303700-T-G **
5199707-C-A 5331666-C-A **
5270637-G-T 5402596-G-T **
5388799-G-T 5520758-G-T **
5432509-G-T 5564468-G-T **
6531653-T-C 6663612-T-C **
13941601-C-T 11820895-C-T **
4668850-G-T 4800809-G-T **
7130725-C-A 7262684-C-A **
7103421-T-G 7235380-T-G **
7106428-C-CA 7238387-C-CA **
7106439-C-T 7238398-C-T **
7109581-C-G 7241540-C-G **
7111876-A-T 7243835-A-T **
7116450-C-A 7248409-C-A **
7116451-C-A 7248410-C-A **
7123783-T-C 7255742-T-C **
7136978-C-A 7268937-C-A **
7058191-TA-T 7190150-TA-T **
7139758-C-A 7271717-C-A **
7150829-T-G 7282788-T-G **
7167776-C-A 7299735-C-A **
7172034-T-G 7303993-T-G **
7180255-T-G 7312214-T-G **
7206744-C-A 7338703-C-A **
7215270-G-T 7347229-G-T **
7217488-C-G 7349447-C-G **
7097400-G-T 7229359-G-T **
7038334-C-A 7170293-C-A **
6671681-A-T 6803640-A-T **
6835514-C-A 6967473-C-A **
6715138-C-A 6847097-C-A **
6736416-T-G 6868375-T-G **
6751918-C-A 6883877-C-A **
6775378-A-G 6907337-A-G **
6784646-C-A 6916605-C-A **
6791653-C-A 6923612-C-A **
6821720-G-T 6953679-G-T **
6833391-C-A 6965350-C-A **
6873353-C-A 7005312-C-A **
7038316-C-A 7170275-C-A **
6910453-A-G 7042412-A-G **
6911568-A-G 7043527-A-G 11×AAAT**
6948143-A-T 7080102-A-T **
6997962-C-A 7129921-C-A **
7011494-T-C 7143453-T-C **
7012261-C-A 7144220-C-A **
7013320-A-C 7145279-A-C **
7021796-C-A 7153755-C-A **
7035316-C-A 7167275-C-A **
4700733-A-T 4832692-A-T **
4630765-T-G 4762724-T-G **
7235927-C-A 7367886-C-A **
2783589-G-T 2915548-G-T **
21133300-C-A 18971414-C-A **
10925373-C-A **
2665816-G-T 2797775-G-T **
2665822-G-T 2797781-G-T **
2689510-C-A 2821469-C-A **
2730163-C-T 2862122-C-T FGC72100 **
2736749-A-C 2868708-A-C **
2766762-C-A 2898721-C-A Z34869 **
2810406-G-A 2942365-G-A **
17382611-G-T 15270731-G-T **
2814917-G-C 2946876-G-C **
2857091-C-A 2989050-C-A **
2877985-C-A 3009944-C-A **
2903463-C-A 3035422-C-A **
2909643-T-G 3041602-T-G **
2970921-C-A 3102880-C-A **
3006343-T-C 3138302-T-C **
3006463-C-A 3138422-C-A **
14432276-C-A 12311549-C-A **
4788831-C-A 4920790-C-A **
3017929-A-G 3149888-A-G **
13487792-T-A 11332116-T-A **
28799036-C-A 26652889-C-A **
7432312-C-A 7564271-C-A CTS1480 **
20875153-CT-C 18713267-CT-C P4_Dst 10×T**
22427775-A-T 20265889-A-T DYZ19 *****
22466614-G-C 20304728-G-C DYZ19 ****
22490973-C-G 20329087-C-G DYZ19 **
17802164-AGT-A 15690284-AGT-A **
9524080-C-CAT 9686471-C-CAT **
15041009-A-T 12929099-A-T **
14104042-C-A 11983336-C-A **
56846856-G-T **
10799600-C-G **
5011531-C-A 5143490-C-A **
14499505-C-T 12387710-C-T **
10918210-G-T **
23059622-C-A 20897736-C-A **
9855961-C-A 10018352-C-A **
8822415-C-A 8954374-C-A **
8142754-C-A 8274713-C-A **
3007851-G-T 3139810-G-T **
3032668-G-T 3164627-G-T **
4626789-G-C 4758748-G-C **
4405776-C-A 4537735-C-A **
4107397-T-C 4239356-T-C **
4151306-T-G 4283265-T-G **
4202518-T-C 4334477-T-C **
4206124-A-G 4338083-A-G **
4255052-C-A 4387011-C-A **
4257400-G-C 4389359-G-C **
4346389-C-A 4478348-C-A **
4370948-C-A 4502907-C-A **
4437982-T-G 4569941-T-G **
4076010-G-C 4207969-G-C **
4443490-G-T 4575449-G-T **
4453946-C-A 4585905-C-A **
4457141-C-A 4589100-C-A **
4510017-A-C 4641976-A-C **
4510025-C-A 4641984-C-A **
4566845-C-A 4698804-C-A **
4582723-AT-A 4714682-AT-A **
4582750-C-G 4714709-C-G **
4102936-G-A 4234895-G-A **
4036898-G-T 4168857-G-T **
3147966-G-T 3279925-G-T **
3664784-T-G 3796743-T-G **
3147971-C-G 3279930-C-G **
3147981-T-G 3279940-T-G **
3147987-G-T 3279946-G-T **
3309843-C-A 3441802-C-A **
3456356-C-A 3588315-C-A **
3483655-C-A 3615614-C-A **
3527607-C-A 3659566-C-A **
3586960-T-A 3718919-T-A **
3679659-A-AAAATAAATAAAT 3811618-A-AAAATAAATAAAT 10×AAAT**
3983930-G-T 4115889-G-T **
3727419-C-A 3859378-C-A **
3737900-G-T 3869859-G-T **
3738062-C-T 3870021-C-T **
3821037-G-T 3952996-G-T **
3821062-G-T 3953021-G-T **
3881303-G-T 4013262-G-T **
3881402-G-C 4013361-G-C **
3884143-G-T 4016102-G-T **
3976535-C-A 4108494-C-A **
7224007-C-A 7355966-C-A **
6655036-G-T 6786995-G-T **
13234888-C-A 11079212-C-A **
9926728-C-A 10089119-C-A **
13485441-T-C 11329765-T-C **
10673743-C-A **
10659502-C-CATTCT **
10632644-C-A **
10624517-T-G **
10057113-C-A 10219504-C-A **
10051310-C-A 10213701-C-A **
10037339-C-A 10199730-C-A **
10025375-T-G 10187766-T-G **
10024862-C-A 10187253-C-A **
9986039-C-A 10148430-C-A **
13925051-G-T 11804345-G-T **
9934175-T-G 10096566-T-G **
9891156-G-T 10053547-G-T **
10758127-C-A **
9874221-C-A 10036612-C-A **
9803617-A-C 9966008-A-C **
13487770-G-T 11332094-G-T **
9751461-A-AT 9913852-A-AT **
9735701-A-T 9898092-A-T IR3_Prx **
9730648-C-A 9893039-C-A IR3_Prx **
9691233-CCA-C 9853624-CCA-C IR3_Prx **
13916420-C-A 11795714-C-A **
9517014-G-T 9679405-G-T **
13273766-C-A 11118090-C-A **
9446321-G-T 9608712-G-T **
9442054-C-A 9604445-C-A **
9430201-T-C 9592592-T-C **
13584674-C-A 11428998-C-A **
10747168-A-C **
10759391-T-A **
9094659-G-T 9257050-G-T **
10927841-T-CGCCAC **
13233996-C-A 11078320-C-A **
13283597-G-T 11127921-G-T **
13194648-A-G 11038972-A-G **
13313974-G-A 11158298-G-A **
13313991-T-G 11158315-T-G **
10971039-C-A **
10962911-T-G **
10962900-C-G **
13320726-A-G 11165050-A-G **
10944184-C-G **
7242069-T-G 7374028-T-G **
13330231-C-A 11174555-C-A **
13389962-ATGTG-A 11234286-ATGTG-A 13×TG**
10929612-C-T **
10876937-C-T **
10759968-T-C **
10866561-G-T **
10850547-C-A **
10843130-C-A **
10816636-G-T **
10814622-G-T **
10789127-C-A **
10785910-A-T **
10772462-A-T **
10772456-C-T **
10772446-C-G **
13473999-C-A 11318323-C-A **
10761741-G-T **
10760018-T-A **
13481078-C-A 11325402-C-A **
9144387-G-A 9306778-G-A **
9508428-C-A 9670819-C-A **
13588477-C-A 11432801-C-A **
7774062-A-G 7906021-A-G **
8096701-C-G 8228660-C-G **
8094657-A-C 8226616-A-C **
8066215-C-A 8198174-C-A **
9014341-G-T 9176732-G-T **
8001953-C-A 8133912-C-A **
7957041-A-G 8089000-A-G **
13855911-A-G 11735205-A-G **
7953366-C-A 8085325-C-A **
7933825-A-G 8065784-A-G **
7897614-C-A 8029573-C-A **
13855970-G-A 11735264-G-A S14959 **
7894586-A-C 8026545-A-C **
7864367-C-A 7996326-C-A **
13856017-A-G 11735311-A-G **
7725742-C-A 7857701-C-A **
8143588-A-T 8275547-A-T **
7385274-A-C 7517233-A-C **
7266435-C-A 7398394-C-A **
7287001-G-T 7418960-G-T **
7287007-T-G 7418966-T-G **
7301704-G-T 7433663-G-T **
7310408-C-A 7442367-C-A **
7312028-T-G 7443987-T-G **
7445137-T-C 7577096-T-C **
7701090-G-T 7833049-G-T **
13870404-G-T 11749698-G-T **
7487281-C-A 7619240-C-A IR1_L **
7643205-G-T 7775164-G-T **
7650609-T-G 7782568-T-G **
13858099-T-C 11737393-T-C **
7664801-C-A 7796760-C-A **
11674891-T-G **
8013511-C-A 8145470-C-A **
8679557-T-A 8811516-T-A **
8376379-C-A 8508338-C-A **
8720199-T-A 8852158-T-A **
8806238-C-A 8938197-C-A **
13597602-C-T 11441926-C-T **
8806250-C-A 8938209-C-A **
13898573-G-T 11777867-G-T **
8907498-C-A 9039457-C-A **
8673764-C-A 8805723-C-A **
8908063-G-C 9040022-G-C **
8654060-A-C 8786019-A-C **
13601938-C-A 11446262-C-A **
8908064-A-G 9040023-A-G **
8399104-T-C 8531063-T-C **
8345902-G-T 8477861-G-T **
13677082-T-G 11521406-T-G **
8146160-C-A 8278119-C-A **
8158841-A-C 8290800-A-C **
8158875-G-C 8290834-G-C **
8172732-G-T 8304691-G-T **
13711410-G-T 11555734-G-T **
13927433-A-T 11806727-A-T **
8979198-C-A 9141589-C-A **
8276227-C-A 8408186-C-A **
8279880-G-T 8411839-G-T **
22452802-T-C 20290916-T-C DYZ19 ***
13862211-G-A 11741505-G-A ***
24152381-C-T 22006234-C-T P3_b1 ***
23433555-AT-A,ATTT 21271669-AT-A,ATTT 13×T***
23377709-C-A 21215823-C-A ***
13841216-G-A 11720510-G-A ***
24168692-A-G 22022545-A-G P3_b1 ***
13845641-G-A 11724935-G-A ***
17446800-TC-T,TT 15334920-TC-T,TT ***
22366307-G-T 20204421-G-T DYZ19 ***
13845655-G-A 11724949-G-A ***
13859990-A-G 11739284-A-G ***
13865892-T-C 11745186-T-C ***
24001448-G-T 21855301-G-T ***
24001436-G-T 21855289-G-T ***
22291285-C-T 20129399-C-T DYZ19 ***
22358638-C-G 20196752-C-G DYZ19 ***
13865900-A-C 11745194-A-C ***
13865968-T-G 11745262-T-G ***
13866020-G-C 11745314-G-C ***
13868120-A-C 11747414-A-C ***
16157710-GA-G 14045830-GA-G P8_Dst ***
22511466-TG-T 20349580-TG-T DYZ19 ***
17323758-G-A 15211878-G-A ***
58974056-C-A 56827909-C-A ***
13839870-G-C 11719164-G-C ***
58975654-G-GTCCATTCCAT 56829507-G-GTCCATTCCAT 4×TCCAT***
13859982-A-G 11739276-A-G ***
13859964-A-AGAATG 11739258-A-AGAATG ***
58975714-G-T 56829567-G-T ***
28754507-G-T 26608360-G-T ***
28755214-C-A 26609067-C-A ***
13839860-G-A 11719154-G-A ***
58975684-T-A 56829537-T-A ***
58975682-C-G 56829535-C-G ***
58975669-T-G 56829522-T-G ***
56837644-G-T ***
16157739-G-A 14045859-G-A P8_Dst ***
13935302-C-A 11814596-C-A ***
56839031-C-A ***
13809677-T-A 11688971-T-A ***
26152241-T-C 24006094-T-C P1_Y1 ***
22293692-C-T 20131806-C-T BY24425 DYZ19 ***
25899791-CAAA-C 23753644-CAAA-C P1_Y1 15×A***
27641708-T-C 25495561-T-C P1_Y2 ***
13824908-C-G 11704202-C-G ***
13801188-G-A 11680482-G-A ***
16157708-A-G 14045828-A-G P8_Dst ***
16157740-A-G 14045860-A-G P8_Dst ***
13824117-T-G 11703411-T-G ***
13824762-T-C 11704056-T-C ***
13817884-AAGGAT-A 11697178-AAGGAT-A ***
13735394-AG-A 11579718-AG-A ***
13652253-G-A 11496577-G-A ***
13459605-C-G 11303929-C-G ***
13139241-A-T 10628727-A-T ***
13139240-C-A 10628726-C-A ***
10037230-A-AG 10199621-A-AG ***
9993170-C-G 10155561-C-G ***
13471726-C-A 11316050-C-A ***
20951194-A-AT 18789308-A-AT P4_Dst 19×T***
24278282-G-A 22132135-G-A P3_b1 ***
13865906-C-A 11745200-C-A ***
13139207-C-T 10628693-C-T ***
58975479-T-TCGAG 56829332-T-TCGAG ***
26565646-C-A 24419499-C-A P1_g2 ***
13664513-G-C 11508837-G-C ***
58974096-A-T 56827949-A-T ***
58974053-T-G 56827906-T-G ***
58974038-T-G 56827891-T-G ***
58974027-A-G 56827880-A-G ***
24829031-T-A 22682884-T-A P3_b2 ***
24185987-A-C 22039840-A-C P3_b1 ***
10935558-AG-A ***
25088946-G-GGA 22942799-G-GGA g1 ***
10668340-C-CAATCCACTCACTCA ***
9461161-G-A 9623552-G-A ***
19055313-G-T 16943433-G-T ***
9730450-T-A 9892841-T-A IR3_Prx ***
9777226-T-A 9939617-T-A ***
15677516-AAAAAAC-A 13565636-AAAAAAC-A ***
4898342-C-A 5030301-C-A ***
10668662-A-G ***
16077458-C-A 13965578-C-A ***
10744282-C-A ***
10750991-C-A ***
20424796-G-T 18262910-G-T P5_Dst ***
10769880-C-T ***
10770502-C-A ***
21083040-C-A 18921154-C-A ***
10814468-C-T ***
16002952-C-A 13891072-C-A ***
16176507-C-A 14064627-C-A ***
10885171-CCACTGAACTC-C,CCATTGCACTG ***
6948126-TG-T,TT 7080085-TG-T,TT ***
17289850-C-A 15177970-C-A ***
7131967-C-A 7263926-C-A ***
7125907-C-T 7257866-C-T ***
7657473-C-A 7789432-C-A ***
17729321-C-A 15617441-C-A ***
17056521-C-A 14944641-C-A ***
7033873-C-A 7165832-C-A ***
8100402-C-A 8232361-C-A ***
8997248-C-A 9159639-C-A ***
8189993-C-A 8321952-C-A ***
6786508-C-T 6918467-C-T Y60963 ***
8325980-A-G 8457939-A-G ***
8456547-C-A 8588506-C-A ***
16482817-C-A 14370937-C-A ***
6444954-AC-A 6576913-AC-A ***
8793492-C-A 8925451-C-A ***
10831520-G-T ***
14745036-G-A 12633105-G-A ***
26152248-T-C 24006101-T-C P1_Y1 ***
18145637-C-A 16033757-C-A ***
22080364-T-G 19918478-T-G ***
10757210-A-G ***
22224779-G-T 20062893-G-T DYZ19 ***
22224791-T-G 20062905-T-G DYZ19 ***
22224800-C-A 20062914-C-A DYZ19 ***
10785610-GCATTC-G ***
13488821-C-A,T 11333145-C-A,T ***
13488919-C-A 11333243-C-A ***
13451055-C-A,T 11295379-C-A,T ***
2752350-T-A 2884309-T-A ***
14181477-C-CA 12060771-C-CA ***
22829644-CAAAAAA-C,CAAAAAAA 20667758-CAAAAAA-C,CAAAAAAA 18×A***
56836822-CCCATT-C ***
13805349-C-A,G 11684643-C-A,G ***
6803877-C-T 6935836-C-T Z36168 ***
58974058-T-TTCCATTCCATTCGATGTCTTTCCATAACGA 56827911-T-TTCCATTCCATTCGATGTCTTTCCATAACGA ***
13452052-C-A 11296376-C-A ***
13449232-G-A 11293556-G-A ***
14735254-C-A 12623322-C-A ***
10987856-TTCCATTCCACTCCAC-T ***
14724338-C-A 12612406-C-A ***
14703105-G-T 12591171-G-T ***
10934725-CCGTTT-C,CCATTT ***
10935548-AC-A ***
10935556-C-AA ***
21385031-C-A 19223145-C-A ***
21457514-A-T 19295628-A-T ***
21554473-ATTT-A,ATT 19392587-ATTT-A,ATT 17×T***
13447887-A-G 11292211-A-G ***
13216983-C-A 11061307-C-A ***
2877874-G-A 3009833-G-A ***
14460103-C-A 12339376-C-A ***
13447217-C-A 11291541-C-A ***
13447227-C-T 11291551-C-T ***
14424079-T-C 12303354-T-C ***
21892648-C-A 19730762-C-A ***
13664323-G-C 11508647-G-C ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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