Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > M222 > FGC4077 > A725 > ~25552691-A-G

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
N112505
FGC
97TRM
22440632-C-T 20278746-C-T FGC37624 DYZ19 ++
19483881-C-T 17372001-C-T FGC37622 Y++
8430520-G-C 8562479-G-C FGC37616 YY++
8431900-G-T 8563859-G-T FGC37617 YY++
9059534-A-T 9221925-A-T FGC37618 Y++
10042813-T-C 10205204-T-C FGC37609 +
16709238-G-C 14597358-G-C FGC37621 Y+
15414885-G-T 13303005-G-T S679 YY++
16298229-C-T 14186349-C-T FGC37620 YY++
17148989-C-T 15037109-C-T S682 YY++
4657408-C-T 4789367-C-T FGC37608 +
19116743-CGTT-C 17004863-CGTT-C +*
21359331-C-G 19197445-C-G FGC37623 YY++
7330015-C-T 7461974-C-T S676 YY++
10014783-C-T 10177174-C-T FGC37619 Y+
3043149-G-A 3175108-G-A FGC37612 +
22270899-C-T 20109013-C-T FGC37610 DYZ19 ++
5452893-G-T 5584852-G-T FGC37615 +
4169078-A-G 4301037-A-G FGC37613 +
4776188-T-C 4908147-T-C FGC37614 +
7686994-A-G 7818953-A-G FGC37611 YY++
8062553-C-T 8194512-C-T **
15856953-C-T 13745073-C-T **
5042180-G-GAT 5174139-G-GAT 17×AT**
15640271-T-A 13528391-T-A **
4782691-A-G 4914650-A-G **
15148779-G-A 13036866-G-A **
4782685-A-G 4914644-A-G **
15962980-T-G 13851100-T-G **
17542633-G-T 15430753-G-T **
4914161-T-C 5046120-T-C **
4255154-G-T 4387113-G-T **
4227691-G-T 4359650-G-T **
4914193-TGAA-T 5046152-TGAA-T **
3785958-C-T 3917917-C-T **
6346082-T-TTATA 6478041-T-TTATA 21×TA**
6011442-T-A 6143401-T-A **
19386570-A-G 17274690-A-G **
7443091-A-C 7575050-A-C **
3588094-GTATATA-G 3720053-GTATATA-G 24×TA**
6591404-G-T 6723363-G-T **
6721588-A-T 6853547-A-T **
17226573-A-C 15114693-A-C **
13257287-ATATT-A 11101611-ATATT-A **
13472279-G-A 11316603-G-A **
23086819-T-C 20924933-T-C **
5246329-T-TAC 5378288-T-TAC 16×AC**
3563017-A-G 3694976-A-G **
9431575-A-T 9593966-A-T **
18234552-G-GA 16122672-G-GA 10×A*****
9721769-T-C 9884160-T-C IR3_Prx **
17950825-AATATATATATATATATATATAT-A 15838945-AATATATATATATATATATATAT-A 27×AT**
21805155-T-C 19643269-T-C **
14154407-A-G 12033701-A-G **
21913740-T-C 19751854-T-C **
21999749-T-C 19837863-T-C **
13252668-G-T 11096992-G-T **
21238886-C-A 19077000-C-A **
3999821-G-GTA 4131780-G-GTA 17×TA**
14134984-G-A 12014278-G-A **
21058742-G-A 18896856-G-A **
13252701-G-A 11097025-G-A **
13487509-A-G 11331833-A-G **
19411914-A-AAAAGAAAGAAAGAAAG 17300034-A-AAAAGAAAGAAAGAAAG 14×AAAG**
8218181-C-T 8350140-C-T **
22622629-A-G 20460743-A-G **
27181561-G-A 25035414-G-A P1_g3 ***
25717339-T-A 23571192-T-A P1_b3 ***
27608901-G-T 25462754-G-T P1_Y2 ***
27060137-G-T 24913990-G-T P1_r4 ***
25709904-G-T 23563757-G-T P1_b3 ***
27483196-C-A 25337049-C-A P1_Y2 ***
27222196-C-A 25076049-C-A P1_g3 ***
25626257-G-C 23480110-G-C P1_b3 ***
27583032-A-T 25436885-A-T P1_Y2 ***
27504043-T-C 25357896-T-C P1_Y2 ***
25628603-C-A 23482456-C-A P1_b3 ***
27288727-G-A 25142580-G-A P1_g3 ***
27499071-G-T 25352924-G-T P1_Y2 ***
25626278-C-A 23480131-C-A P1_b3 ***
27483300-T-A 25337153-T-A P1_Y2 ***
25526043-T-G 23379896-T-G P1_gr1 ***
25839166-G-T 23693019-G-T P1_b3 ***
25732469-G-T 23586322-G-T P1_b3 ***
26702911-T-A 24556764-T-A P1_g2 ***
26463558-G-T 24317411-G-T P1_Y1 ***
26517735-A-G 24371588-A-G P1_Y1 ***
26422041-A-G 24275894-A-G P1_Y1 ***
26421988-T-G 24275841-T-G P1_Y1 ***
26421963-A-G 24275816-A-G P1_Y1 ***
26376712-A-T 24230565-A-T P1_Y1 ***
26326757-C-T 24180610-C-T P1_Y1 ***
26660049-A-C 24513902-A-C P1_g2 ***
26312513-C-A 24166366-C-A P1_Y1 ***
26228780-G-T 24082633-G-T P1_Y1 ***
26228746-A-T 24082599-A-T P1_Y1 ***
25737732-G-A 23591585-G-A P1_b3 ***
26810585-C-T 24664438-C-T P1_g2 ***
26948489-C-A 24802342-C-A P1_r3 ***
26120035-G-A 23973888-G-A P1_Y1 ***
26110912-T-C 23964765-T-C P1_Y1 ***
26948634-G-A 24802487-G-A P1_r3 ***
26101337-T-A 23955190-T-A P1_Y1 ***
26992940-G-T 24846793-G-T P1_r4 ***
26101242-G-T 23955095-G-T P1_Y1 ***
25849791-T-G 23703644-T-G P1_Y1 ***
25848847-T-A 23702700-T-A P1_Y1 ***
26495996-C-G 24349849-C-G P1_Y1 ***
26834853-AAAGG-A 24688706-AAAGG-A P1_g2 11×AAGG***
25207610-T-A 23061463-T-A P2_r1 ***
25525980-G-T 23379833-G-T P1_gr1 ***
22450545-T-A 20288659-T-A DYZ19 ***
23332646-C-T 21170760-C-T ***
23332611-A-C 21170725-A-C ***
23332607-A-G 21170721-A-G ***
23172004-T-C 21010118-T-C ***
23084680-C-T 20922794-C-T ***
23004501-G-C 20842615-G-C ***
22644591-A-G 20482705-A-G ***
22502297-T-A 20340411-T-A DYZ19 ***
22482800-T-A 20320914-T-A DYZ19 ***
22481621-T-A 20319735-T-A DYZ19 ***
22481608-T-G 20319722-T-G DYZ19 ***
22481581-A-G 20319695-A-G DYZ19 ***
22481567-T-A 20319681-T-A DYZ19 ***
22366089-C-A 20204203-C-A DYZ19 ***
24109966-G-A 21963819-G-A P3_b1 ***
22364438-G-T 20202552-G-T DYZ19 ***
22361419-C-T 20199533-C-T DYZ19 ***
22361404-C-A 20199518-C-A DYZ19 ***
22358366-G-C 20196480-G-C DYZ19 ***
22358359-C-T 20196473-C-T DYZ19 ***
22358209-G-T 20196323-G-T DYZ19 ***
22357697-T-C 20195811-T-C DYZ19 ***
22352662-G-T 20190776-G-T DYZ19 ***
22347798-A-T 20185912-A-T DYZ19 ***
22327866-T-C 20165980-T-C DYZ19 ***
22327807-T-A 20165921-T-A DYZ19 ***
22327804-G-T 20165918-G-T DYZ19 ***
22327773-T-A 20165887-T-A DYZ19 ***
22324657-T-C 20162771-T-C DYZ19 ***
24013562-A-T 21867415-A-T ***
24113319-T-C 21967172-T-C P3_b1 ***
25520369-T-G 23374222-T-G P1_gr1 ***
25157817-C-T 23011670-C-T g1 ***
25505774-G-T 23359627-G-T P1_gr1 ***
25456371-C-A 23310224-C-A P2_r2 ***
25310499-G-A 23164352-G-A P2_r1 ***
25287895-G-A 23141748-G-A P2_r1 ***
25246723-A-C 23100576-A-C P2_r1 ***
25231917-A-G 23085770-A-G P2_r1 ***
25231808-T-C 23085661-T-C P2_r1 ***
25207659-T-G 23061512-T-G P2_r1 ***
25207654-T-A 23061507-T-A P2_r1 ***
27651569-G-A 25505422-G-A P1_Y2 ***
25207544-C-A 23061397-C-A P2_r1 ***
25207525-C-A 23061378-C-A P2_r1 ***
25207511-T-A 23061364-T-A P2_r1 ***
25161500-G-T 23015353-G-T g1 ***
24971623-C-A 22825476-C-A g1 ***
24143039-A-G 21996892-A-G P3_b1 ***
24954722-C-A 22808575-C-A g1 ***
24935648-C-T 22789501-C-T g1 ***
24924117-A-T 22777970-A-T g1 ***
24862229-C-A 22716082-C-A P3_b2 ***
24862204-T-A 22716057-T-A P3_b2 ***
24661839-C-T 22515692-C-T P3_b2 ***
24646720-A-C 22500573-A-C P3_b2 ***
24621217-G-T 22475070-G-T P3_t2 ***
24552174-C-T 22406027-C-T P3_t2 ***
24339186-G-T 22193039-G-T P3_t1 ***
24283307-G-T 22137160-G-T P3_t1 ***
24232042-A-C 22085895-A-C P3_b1 ***
24209885-G-A 22063738-G-A P3_b1 ***
24157969-A-G 22011822-A-G P3_b1 ***
27610099-T-G 25463952-T-G P1_Y2 ***
58837627-T-C 56753244-A-G ***
27651586-C-A 25505439-C-A P1_Y2 ***
13485554-GTGG-ATGT 11329878-GTGG-ATGT ***
16868741-TTATACATA-T 14756861-TTATACATA-T ***
16838966-G-GAAAT 14727086-G-GAAAT ***
15799163-CCTT-C 13687283-CCTT-C ***
14937873-C-CTTTTCTTTTG 12825948-C-CTTTTCTTTTG ***
14645425-GTTTTT-G 12533489-GTTTTT-G ***
14610898-T-TACAA 12499104-T-TACAA ***
13840824-T-TGGAAA 11720118-T-TGGAAA ***
13838180-T-TGGAAG 11717474-T-TGGAAG ***
13838166-G-GGAAAT 11717460-G-GGAAAT ***
13724151-ACC-TCG 11568475-ACC-TCG ***
13616426-GT-ATA 11460750-GT-ATA ***
13489363-CTTCTCCCC-GTTCCACT 11333687-CTTCTCCCC-GTTCCACT ***
13488814-CCGGACCCG-TGGAACACA 11333138-CCGGACCCG-TGGAACACA ***
13471838-ATACT-TTGCC 11316162-ATACT-TTGCC ***
17707375-TCAAAA-T 15595495-TCAAAA-T ***
13471806-AC-GT 11316130-AC-GT ***
13461206-GGCC-AGCG 11305530-GGCC-AGCG ***
13461179-GATACA-CATATC 11305503-GATACA-CATATC ***
13461141-CTAG-TTAT 11305465-CTAG-TTAT ***
13456025-A-ATTCCT 11300349-A-ATTCCT ***
13456020-A-ATTCCT 11300344-A-ATTCCT ***
13454813-A-ATTCCC 11299137-A-ATTCCC ***
13454807-T-TACTCC 11299131-T-TACTCC ***
13205597-TAT-AAA 11049921-TAT-AAA ***
13142948-G-GCATTCCATTC 10632434-G-GCATTCCATTC 11×CATTC***
9398651-A-AT 9561042-A-AT ***
8814916-CT-C 8946875-CT-C 8×T***
8690237-T-TTG 8822196-T-TTG ***
17275760-A-AGGGAC 15163880-A-AGGGAC ***
17802165-GTAAAAAAA-G 15690285-GTAAAAAAA-G ***
8218181-CTCTT-TTCTC 8350140-CTCTT-TTCTC ***
22357675-TTCG-ATCA 20195789-TTCG-ATCA DYZ19 ***
58906053-TT-CC 56684817-AA-GG ***
58903484-GTCCATTCCAT-G 56687372-CTGGAATGGAA-C ***
58881574-GTCCATTCCATTCCATTACAGTCCATTCCAATCCCTTCCATTCCTTTGCCTTCCATTCGAA-G 56709224-AGAATGGAATGGATTCGAATGGAAGGCAAAGGAATGGAAGGGATTGGAATGGACTGTAATG-A ***
58876658-AC-CT 56714212-GT-AG ***
58862655-GTTAC-ATTAT 56728212-GTAAC-ATAAT ***
58848158-CCCATTCCATT-C 56742662-CAATGGAATGG-C 10×CCATT***
58837757-TATTC-AATTT 56753110-GAATA-AAATT ***
58823281-CCATCT-GCATTC 56767585-AGATGG-GAATGC ***
25605740-CA-C 23459593-CA-C P1_gr1 15×A***
23435181-G-TT 21273295-G-TT 20×T***
23316015-A-ACTTT 21154129-A-ACTTT ***
23181453-CA-C 21019567-CA-C 34×A***
23018099-GT-G 20856213-GT-G ***
22341394-A-GT 20179508-A-GT DYZ19 ***
18147537-T-TGG 16035657-T-TGG ***
22327804-GTGT-TTGA 20165918-GTGT-TTGA DYZ19 ***
22311258-AT-CC 20149372-AT-CC DYZ19 ***
22299275-C-CA 20137389-C-CA DYZ19 ***
22292824-TGAA-AGGG 20130938-TGAA-AGGG DYZ19 ***
22292760-AT-TC 20130874-AT-TC DYZ19 ***
22292750-AAGTCT-GTGTCC 20130864-AAGTCT-GTGTCC DYZ19 ***
22268200-GG-TA 20106314-GG-TA DYZ19 ***
22268168-AGT-TAC 20106282-AGT-TAC DYZ19 ***
22099673-T-TTATTAG 19937787-T-TTATTAG ***
21796157-TG-T 19634271-TG-T ***
21665724-T-TAAAC 19503838-T-TAAAC ***
20426351-CA-C 18264465-CA-C P5_Dst 19×A***
19753632-ACATG-CCATC 17641752-ACATG-CCATC P5_Prx ***
8666723-GTTTTT-G 8798682-GTTTTT-G 25×T***
8218181-CTCTT-C 8350140-CTCTT-C ***
27651659-G-A 25505512-G-A P1_Y2 ***
58823715-C-G 56767156-G-C ***
58855789-A-T 56735082-T-A ***
58855687-T-C 56735184-A-G ***
58854578-G-T 56736293-C-A ***
58846896-A-T 56743975-T-A ***
58846800-C-A 56744071-G-T ***
58837820-T-C 56753051-A-G ***
58837761-C-T 56753110-G-A ***
58837757-T-A 56753114-A-T ***
58837731-A-G 56753140-T-C ***
22311235-T-C 20149349-T-C DYZ19 ***
58837572-C-T 56753299-G-A ***
58825017-T-C 56765854-A-G ***
58824988-A-T 56765883-T-A ***
58823281-C-G 56767590-G-C ***
58885971-C-A 56704900-G-T ***
28602211-G-T 26456064-G-T ***
28489824-G-A 26343677-G-A ***
28486604-T-C 26340457-T-C ***
28336662-C-A 26190515-C-A P1_b4 ***
28306524-C-T 26160377-C-T P1_b4 ***
28206822-A-G 26060675-A-G P1_b4 ***
28117261-G-T 25971114-G-T P1_b4 ***
28025169-G-A 25879022-G-A P1_Y2 11×A***
28008008-C-A 25861861-C-A P1_Y2 ***
27915904-T-G 25769757-T-G P1_Y2 ***
27915825-G-A 25769678-G-A P1_Y2 ***
27862085-A-C 25715938-A-C P1_Y2 ***
27826758-T-G 25680611-T-G P1_Y2 ***
58869353-T-C 56721518-A-G ***
58891017-A-G 56699854-T-C ***
7394141-GTA-TTC 7526100-GTA-TTC ***
3641037-C-CTTTCT 3772996-C-CTTTCT ***
7312578-AAGGGAGGGAGGGGAGAAGGG-A 7444537-AAGGGAGGGAGGGGAGAAGGG-A ***
6750962-TG-CA 6882921-TG-CA ***
6750948-GCC-ACA 6882907-GCC-ACA ***
6226090-T-TCTTC 6358049-T-TCTTC IR3_Dst ***
6127674-GTCT-G 6259633-GTCT-G ***
5937244-ATATA-CTC 6069203-ATATA-CTC ***
5937208-A-ATCTC 6069167-A-ATCTC 17×TC***
5569385-G-GAAAA 5701344-G-GAAAA 10×A***
5555645-CAAAA-C 5687604-CAAAA-C 18×A***
5240978-C-CCCTT 5372937-C-CCCTT 5×CTTT***
4636107-ATAT-A 4768066-ATAT-A ***
4382449-CAAAA-C 4514408-CAAAA-C 17×A***
3679700-A-AAATC 3811659-A-AAATC ***
3571635-C-CA 3703594-C-CA ***
58892984-G-A 56697887-C-T ***
3311775-G-GC 3443734-G-GC ***
2915036-TTCCTTC-T 3046995-TTCCTTC-T ***
16978999-GA-G 14867119-GA-G 14×A***
22341375-GT-TC 20179489-GT-TC DYZ19 ***
5273214-CT-C 5405173-CT-C 23×T***
28237962-AG-A 26091815-AG-A P1_b4 ***
58913720-G-T 56677151-C-A ***
58903863-A-T 56687008-T-A ***
58903471-C-G 56687400-G-C ***
58903452-T-C 56687419-A-G ***
58903390-T-C 56687481-A-G ***
58898724-G-T 56692147-C-A ***
58894677-G-T 56696194-C-A ***
22322286-A-T 20160400-A-T DYZ19 ***
20752808-G-A 18590922-G-A P4_Prx ***
22311230-C-A 20149344-C-A DYZ19 ***
4740177-G-A 4872136-G-A ***
6750963-G-A 6882922-G-A ***
6750962-T-C 6882921-T-C ***
6750950-C-A 6882909-C-A ***
6750948-G-A 6882907-G-A ***
6622886-T-A 6754845-T-A ***
6495261-A-G 6627220-A-G ***
6151681-C-A 6283640-C-A IR3_Dst ***
5813764-C-T 5945723-C-T ***
5813749-C-T 5945708-C-T ***
5701651-A-G 5833610-A-G ***
5570333-T-C 5702292-T-C ***
5065182-G-T 5197141-G-T ***
4431082-A-T 4563041-A-T ***
6750996-A-G 6882955-A-G ***
4019814-C-A 4151773-C-A ***
4019791-A-T 4151750-A-T ***
3459410-C-A 3591369-C-A ***
3459060-T-C 3591019-T-C ***
3128453-C-A 3260412-C-A ***
2810407-C-T 2942366-C-T ***
2803343-A-G 2935302-A-G ***
2678800-T-C 2810759-T-C ***
2677886-G-T 2809845-G-T ***
22292827-A-G 20130941-A-G DYZ19 ***
22297098-T-A 20135212-T-A DYZ19 ***
14631127-G-A 12519196-G-A ***
6750990-A-G 6882949-A-G ***
7061915-T-A 7193874-T-A ***
13616422-C-T 11460746-C-T ***
9374333-T-C 9536724-T-C ***
13121324-T-G 10610810-T-G ***
13115007-G-T 10604493-G-T ***
10103037-T-A 10265428-T-A ***
10041578-G-A 10203969-G-A ***
10033416-G-T 10195807-G-T ***
10015026-C-A 10177417-C-A ***
9947873-C-T 10110264-C-T ***
9677390-A-C 9839781-A-C IR3_Prx ***
9592368-G-T 9754759-G-T IR3_Prx ***
9592327-G-T 9754718-G-T IR3_Prx ***
9556871-A-G 9719262-A-G IR3_Prx ***
9540132-T-G 9702523-T-G IR3_Prx ***
9324119-G-A 9486510-G-A ***
7121415-G-A 7253374-G-A ***
9230860-A-G 9393251-A-G ***
9224819-C-A 9387210-C-A ***
9200092-G-T 9362483-G-T ***
8972292-T-C 9134683-T-C ***
8218185-T-C 8350144-T-C ***
8137063-G-A 8269022-G-A ***
8062963-A-G 8194922-A-G ***
7573239-C-A 7705198-C-A ***
7443652-A-C 7575611-A-C ***
7394014-G-C 7525973-G-C ***
7373303-G-T 7505262-G-T ***
7277085-C-A 7409044-C-A ***
7121472-C-G 7253431-C-G ***
13471853-G-C 11316177-G-C ***
13267546-T-C 11111870-T-C ***
13222083-A-G 11066407-A-G ***
6430439-T-TTA 6562398-T-TTA 19×TA***
22282949-A-G 20121063-A-G DYZ19 ***
22250353-T-A 20088467-T-A DYZ19 ***
22247112-A-T 20085226-A-T DYZ19 ***
22221464-G-T 20059578-G-T DYZ19 ***
20737530-G-C 18575644-G-C P4_Prx ***
22249121-G-T 20087235-G-T DYZ19 ***
22341704-G-T 20179818-G-T DYZ19 ***
22292779-C-T 20130893-C-T DYZ19 ***
22292760-A-T 20130874-A-T DYZ19 ***
58872916-T-C 56717955-A-G ***
21687989-G-C 19526103-G-C BY28127 ***
13258354-G-A 11102678-G-A ***
28577950-T-TAC 26431803-T-TAC 17×AC***
22308147-G-C 20146261-G-C DYZ19 ***
22297702-TGAATGT-AGAGTGA 20135816-TGAATGT-AGAGTGA DYZ19 ***
58852260-C-G 56738611-G-C ***
22297684-T-A 20135798-T-A DYZ19 ***
22297705-A-G 20135819-A-G DYZ19 ***
22297717-A-T 20135831-A-T DYZ19 ***
58820272-C-T 56770599-G-A ***
20084465-C-T 17972585-C-T P5_Dst ***
8218013-TTTTCTTTC-T 8349972-TTTTCTTTC-T 15×TTTC***
25747106-G-A 23600959-G-A P1_b3 ***
13724052-G-T 11568376-G-T ***
22357834-C-A 20195948-C-A DYZ19 ***
25955976-CTGTG-C 23809829-CTGTG-C P1_Y1 16×TG***
58824981-A-C 56765890-T-G ***
22284355-A-T 20122469-A-T DYZ19 ***
25363877-C-T 23217730-C-T P2_r2 ***
13267570-T-A 11111894-T-A ***
22264032-GT-G 20102146-GT-G DYZ19 ***
13223014-A-G 11067338-A-G ***
22297702-T-A 20135816-T-A DYZ19 ***
22297708-T-A 20135822-T-A DYZ19 ***
22297714-T-C 20135828-T-C DYZ19 ***
13737661-A-T 11581985-A-T ***
28117202-A-T 25971055-A-T P1_b4 ***
13489671-T-C 11333995-T-C ***
13267493-G-A 11111817-G-A ***
25466376-T-G 23320229-T-G P2_r2 ***
28117258-G-T 25971111-G-T P1_b4 ***
23293598-GTA-G 21131712-GTA-G 20×TA***
13724179-TG-AC 11568503-TG-AC ***
13488775-CCTCC-GCTCA 11333099-CCTCC-GCTCA ***
24782876-A-G 22636729-A-G BY23044 P3_b2 ***
13488762-CCACC-TCACT 11333086-CCACC-TCACT ***
22292789-C-G 20130903-C-G DYZ19 ***
13488766-C-T 11333090-C-T ***
13488762-C-T 11333086-C-T ***
9295791-C-A 9458182-C-A ***
59001389-AAAG-A 56855242-AAAG-A ***
28577852-A-G 26431705-A-G ***
13267524-A-G 11111848-A-G ***
13267486-A-AG 11111810-A-AG ***
13260372-T-A 11104696-T-A ***
13260314-G-A 11104638-G-A ***
13260296-T-G 11104620-T-G ***
13223482-G-A 11067806-G-A ***
13201948-G-A 11046272-G-A ***
13223252-A-G 11067576-A-G ***
22292817-C-T 20130931-C-T DYZ19 ***
20084639-A-T 17972759-A-T P5_Dst ***
20534225-G-A 18372339-G-A P5_Dst ***
20472540-G-T 18310654-G-T P5_Dst ***
20438866-C-T 18276980-C-T P5_Dst ***
20438748-G-A 18276862-G-A P5_Dst ***
20426330-T-G 18264444-T-G P5_Dst ***
20426120-C-A 18264234-C-A P5_Dst ***
20426098-T-G 18264212-T-G P5_Dst ***
20377708-T-A 18215822-T-A P5_Dst ***
20358902-A-G 18197016-A-G P5_Dst ***
20243244-G-A 18081358-G-A P5_Dst ***
20131352-A-C 18019472-A-C P5_Dst ***
20084727-G-T 17972847-G-T P5_Dst ***
20084607-G-T 17972727-G-T P5_Dst ***
20615415-C-G 18453529-C-G P4_Prx ***
20084592-A-T 17972712-A-T P5_Dst ***
20084583-G-T 17972703-G-T P5_Dst ***
20025319-A-G 17913439-A-G P5_Prx ***
19853523-C-A 17741643-C-A P5_Prx ***
19853447-G-C 17741567-G-C P5_Prx ***
19771692-A-G 17659812-A-G P5_Prx ***
19755243-C-A 17643363-C-A P5_Prx ***
19753627-G-A 17641747-G-A P5_Prx ***
19753620-A-C 17641740-A-C P5_Prx ***
19753614-C-A 17641734-C-A P5_Prx ***
19720355-T-A 17608475-T-A P5_Prx ***
19663764-T-G 17551884-T-G P5_Prx ***
19611257-G-T 17499377-G-T P5_Prx ***
20534497-G-T 18372611-G-T P5_Dst ***
20618059-G-T 18456173-G-T P4_Prx ***
19352963-T-C 17241083-T-C ***
21829908-C-A 19668022-C-A ***
22292761-T-C 20130875-T-C DYZ19 ***
22292755-T-C 20130869-T-C DYZ19 ***
22292751-A-T 20130865-A-T DYZ19 ***
22292750-A-G 20130864-A-G DYZ19 ***
22268222-A-T 20106336-A-T DYZ19 ***
22268193-G-T 20106307-G-T DYZ19 ***
22234913-C-A 20073027-C-A DYZ19 ***
22227894-C-T 20066008-C-T DYZ19 ***
22227878-T-C 20065992-T-C DYZ19 ***
22197772-T-C 20035886-T-C ***
21997087-T-A 19835201-T-A ***
21996786-T-G 19834900-T-G ***
21474835-T-C 19312949-T-C ***
20632629-T-A 18470743-T-A P4_Prx ***
21448885-T-C 19286999-T-C ***
21377051-T-A 19215165-T-A ***
21273636-G-A 19111750-G-A ***
21198789-A-G 19036903-A-G ***
21197049-C-A 19035163-C-A ***
20998284-G-A 18836398-G-A P4_Dst ***
20949849-G-A 18787963-G-A P4_Dst ***
20943241-A-G 18781355-A-G P4_Dst ***
20873664-A-T 18711778-A-T P4_Dst ***
13461141-C-T 11305465-C-T ***
20747911-A-C 18586025-A-C P4_Prx ***
20697716-T-G 18535830-T-G P4_Prx ***
20645880-A-T 18483994-A-T P4_Prx ***
19583960-T-C 17472080-T-C P5_Prx ***
19304447-A-G 17192567-A-G ***
13253273-G-T 11097597-G-T ***
13733644-T-A 11577968-T-A ***
14683572-C-T 12571638-C-T ***
14441088-G-T 12320361-G-T ***
14390975-T-A 12270271-T-A ***
14247181-A-T 12126475-A-T ***
14181054-G-T 12060348-G-T ***
14180969-T-A 12060263-T-A ***
14155781-G-T 12035075-G-T ***
14131393-T-C 12010687-T-C ***
14113232-C-T 11992526-C-T ***
13981235-T-C 11860529-T-C ***
13878099-A-T 11757393-A-T ***
13740852-T-G 11585176-T-G ***
13606785-C-A 11451109-C-A ***
15117026-T-A 13005113-T-A ***
13489418-C-G 11333742-C-G ***
13489395-C-G 11333719-C-G ***
13489369-C-A 11333693-C-A ***
13489363-C-G 11333687-C-G ***
13489309-G-T 11333633-G-T ***
13488903-T-A 11333227-T-A ***
13488817-G-A 11333141-G-A ***
13471838-A-T 11316162-A-T ***
13465778-C-T 11310102-C-T ***
13461088-A-G 11305412-A-G ***
13460960-G-T 11305284-G-T ***
13460934-G-A 11305258-G-A ***
13312285-C-A 11156609-C-A ***
14703662-A-G 12591728-A-G ***
15150461-A-C 13038548-A-C ***
19176157-G-A 17064277-G-A ***
17067610-G-A 14955730-G-A ***
19138460-G-T 17026580-G-T ***
19097688-C-T 16985808-C-T ***
18480506-G-T 16368626-G-T P6_Dst ***
18352965-G-C 16241085-G-C P6_Prx ***
18344261-A-T 16232381-A-T P6_Prx ***
18318092-C-T 16206212-C-T P6_Prx ***
18317073-G-T 16205193-G-T P6_Prx ***
18001790-G-T 15889910-G-T P7_Gap ***
17998305-A-G 15886425-A-G P7_Gap ***
17700771-T-C 15588891-T-C ***
17268365-A-T 15156485-A-T ***
17228047-G-T 15116167-G-T ***
16978694-G-T 14866814-G-T ***
15245183-T-C 13133269-T-C ***
16685070-C-A 14573190-C-A ***
16498310-G-T 14386430-G-T ***
16210666-T-A 14098786-T-A ***
16161361-C-T 14049481-C-T P8_Dst ***
16135521-A-G 14023641-A-G P8_Dst ***
16105661-C-G 13993781-C-G P8_Prx ***
16069449-C-A 13957569-C-A ***
15952709-C-T 13840829-C-T ***
15804240-A-G 13692360-A-G ***
15676501-C-T 13564621-C-T ***
15297088-A-C 13185187-A-C ***
15296286-T-C 13184385-T-C ***
15245213-A-G 13133299-A-G ***
58916176-TGAGTCCATTCCAT-CGAG 56674682-ATGGAATGGACTCA-CTCG ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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