Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > M222 > FGC4077 > A725 > ~25552691-A-G

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
N112505
FGC
97TRM
10042813-T-C 10205204-T-C FGC37609 +
8431900-G-T 8563859-G-T FGC37617 YY++
22440632-C-T 20278746-C-T FGC37624 DYZ19 ++
16709238-G-C 14597358-G-C FGC37621 Y+
4657408-C-T 4789367-C-T FGC37608 +
7330015-C-T 7461974-C-T S676 YY++
7686994-A-G 7818953-A-G FGC37611 YY++
8430520-G-C 8562479-G-C FGC37616 YY++
9059534-A-T 9221925-A-T FGC37618 Y++
4776188-T-C 4908147-T-C FGC37614 +
15414885-G-T 13303005-G-T S679 YY++
16298229-C-T 14186349-C-T FGC37620 YY++
17148989-C-T 15037109-C-T S682 YY++
19116743-CGTT-C 17004863-CGTT-C +*
19483881-C-T 17372001-C-T FGC37622 Y++
21359331-C-G 19197445-C-G FGC37623 YY++
22270899-C-T 20109013-C-T FGC37610 DYZ19 ++
4169078-A-G 4301037-A-G FGC37613 +
3043149-G-A 3175108-G-A FGC37612 +
10014783-C-T 10177174-C-T FGC37619 Y+
5452893-G-T 5584852-G-T FGC37615 +
4914161-T-C 5046120-T-C **
7443091-A-C 7575050-A-C **
14154407-A-G 12033701-A-G **
8062553-C-T 8194512-C-T **
14134984-G-A 12014278-G-A **
9431575-A-T 9593966-A-T **
9721769-T-C 9884160-T-C IR3_Prx **
5246329-T-TAC 5378288-T-TAC 16×AC**
6721588-A-T 6853547-A-T **
13487509-A-G 11331833-A-G **
13257287-ATATT-A 11101611-ATATT-A **
5042180-G-GAT 5174139-G-GAT 17×AT**
59007174-A-G 56861027-A-G **
13252668-G-T 11096992-G-T **
23086819-T-C 20924933-T-C **
15148779-G-A 13036866-G-A **
19386570-A-G 17274690-A-G **
6591404-G-T 6723363-G-T **
15856953-C-T 13745073-C-T **
4782685-A-G 4914644-A-G **
4255154-G-T 4387113-G-T **
4227691-G-T 4359650-G-T **
15962980-T-G 13851100-T-G **
3588094-GTATATA-G 3720053-GTATATA-G 24×TA**
3785958-C-T 3917917-C-T **
4914193-TGAA-T 5046152-TGAA-T **
4782691-A-G 4914650-A-G **
6011442-T-A 6143401-T-A **
17226573-A-C 15114693-A-C **
17542633-G-T 15430753-G-T **
15640271-T-A 13528391-T-A **
6346082-T-TTATA 6478041-T-TTATA 21×TA**
13472279-G-A 11316603-G-A **
3563017-A-G 3694976-A-G **
18234552-G-GA 16122672-G-GA 10×A*****
13960586-AGGAT-A 11839880-AGGAT-A 13×GGAT**
22622629-A-G 20460743-A-G **
19411914-A-AAAAGAAAGAAAGAAAG 17300034-A-AAAAGAAAGAAAGAAAG 14×AAAG**
21999749-T-C 19837863-T-C **
15158740-A-G 13046826-A-G CTS3762 Z2766 **
21913740-T-C 19751854-T-C **
8218181-C-T 8350140-C-T **
21805155-T-C 19643269-T-C **
59016454-C-A 56870307-C-A **
3999821-G-GTA 4131780-G-GTA 17×TA**
21238886-C-A 19077000-C-A **
21058742-G-A 18896856-G-A **
13252701-G-A 11097025-G-A **
17950825-AATATATATATATATATATATAT-A 15838945-AATATATATATATATATATATAT-A 27×AT**
8182205-CAAA-C 8314164-CAAA-C 18×A**
7166601-CATAT-C 7298560-CATAT-C 20×AT**
13461014-G-T 11305338-G-T **
24209885-G-A 22063738-G-A P3_b1 ***
26101337-T-A 23955190-T-A P1_Y1 ***
23004501-G-C 20842615-G-C ***
23084680-C-T 20922794-C-T ***
26421963-A-G 24275816-A-G P1_Y1 ***
22482800-T-A 20320914-T-A DYZ19 ***
26376712-A-T 24230565-A-T P1_Y1 ***
26326757-C-T 24180610-C-T P1_Y1 ***
26312513-C-A 24166366-C-A P1_Y1 ***
26228780-G-T 24082633-G-T P1_Y1 ***
26228746-A-T 24082599-A-T P1_Y1 ***
26120035-G-A 23973888-G-A P1_Y1 ***
26110912-T-C 23964765-T-C P1_Y1 ***
22322286-A-T 20160400-A-T DYZ19 ***
26421988-T-G 24275841-T-G P1_Y1 ***
26101242-G-T 23955095-G-T P1_Y1 ***
25849791-T-G 23703644-T-G P1_Y1 ***
25848847-T-A 23702700-T-A P1_Y1 ***
25839166-G-T 23693019-G-T P1_b3 ***
23172004-T-C 21010118-T-C ***
25737732-G-A 23591585-G-A P1_b3 ***
22324657-T-C 20162771-T-C DYZ19 ***
23332607-A-G 21170721-A-G ***
25732469-G-T 23586322-G-T P1_b3 ***
22327773-T-A 20165887-T-A DYZ19 ***
25717339-T-A 23571192-T-A P1_b3 ***
22327804-G-T 20165918-G-T DYZ19 ***
22311235-T-C 20149349-T-C DYZ19 ***
26422041-A-G 24275894-A-G P1_Y1 ***
23332611-A-C 21170725-A-C ***
22292817-C-T 20130931-C-T DYZ19 ***
27610099-T-G 25463952-T-G P1_Y2 ***
22292755-T-C 20130869-T-C DYZ19 ***
27608901-G-T 25462754-G-T P1_Y2 ***
27583032-A-T 25436885-A-T P1_Y2 ***
27504043-T-C 25357896-T-C P1_Y2 ***
27499071-G-T 25352924-G-T P1_Y2 ***
27483300-T-A 25337153-T-A P1_Y2 ***
27483196-C-A 25337049-C-A P1_Y2 ***
22292761-T-C 20130875-T-C DYZ19 ***
27288727-G-A 25142580-G-A P1_g3 ***
27222196-C-A 25076049-C-A P1_g3 ***
27181561-G-A 25035414-G-A P1_g3 ***
26463558-G-T 24317411-G-T P1_Y1 ***
22502297-T-A 20340411-T-A DYZ19 ***
27060137-G-T 24913990-G-T P1_r4 ***
27060122-A-G 24913975-A-G P1_r4 ***
26992940-G-T 24846793-G-T P1_r4 ***
26948634-G-A 24802487-G-A P1_r3 ***
26948489-C-A 24802342-C-A P1_r3 ***
22311230-C-A 20149344-C-A DYZ19 ***
26810585-C-T 24664438-C-T P1_g2 ***
26702911-T-A 24556764-T-A P1_g2 ***
26660049-A-C 24513902-A-C P1_g2 ***
26517735-A-G 24371588-A-G P1_Y1 ***
26495996-C-G 24349849-C-G P1_Y1 ***
25709904-G-T 23563757-G-T P1_b3 ***
22327807-T-A 20165921-T-A DYZ19 ***
24232042-A-C 22085895-A-C P3_b1 ***
24935648-C-T 22789501-C-T g1 ***
25207610-T-A 23061463-T-A P2_r1 ***
25207544-C-A 23061397-C-A P2_r1 ***
25207525-C-A 23061378-C-A P2_r1 ***
25207511-T-A 23061364-T-A P2_r1 ***
25161500-G-T 23015353-G-T g1 ***
27651569-G-A 25505422-G-A P1_Y2 ***
25157817-C-T 23011670-C-T g1 ***
24971623-C-A 22825476-C-A g1 ***
24157969-A-G 22011822-A-G P3_b1 ***
24954722-C-A 22808575-C-A g1 ***
22450545-T-A 20288659-T-A DYZ19 ***
22481567-T-A 20319681-T-A DYZ19 ***
25207659-T-G 23061512-T-G P2_r1 ***
22481581-A-G 20319695-A-G DYZ19 ***
22481621-T-A 20319735-T-A DYZ19 ***
24924117-A-T 22777970-A-T g1 ***
24862229-C-A 22716082-C-A P3_b2 ***
24862204-T-A 22716057-T-A P3_b2 ***
24661839-C-T 22515692-C-T P3_b2 ***
24646720-A-C 22500573-A-C P3_b2 ***
22481608-T-G 20319722-T-G DYZ19 ***
24621217-G-T 22475070-G-T P3_t2 ***
24552174-C-T 22406027-C-T P3_t2 ***
24339186-G-T 22193039-G-T P3_t1 ***
24283307-G-T 22137160-G-T P3_t1 ***
25207654-T-A 23061507-T-A P2_r1 ***
22366089-C-A 20204203-C-A DYZ19 ***
25628603-C-A 23482456-C-A P1_b3 ***
25525980-G-T 23379833-G-T P1_gr1 ***
23332646-C-T 21170760-C-T ***
22327866-T-C 20165980-T-C DYZ19 ***
22347798-A-T 20185912-A-T DYZ19 ***
24013562-A-T 21867415-A-T ***
25626278-C-A 23480131-C-A P1_b3 ***
25626257-G-C 23480110-G-C P1_b3 ***
22644591-A-G 20482705-A-G ***
22357697-T-C 20195811-T-C DYZ19 ***
22358209-G-T 20196323-G-T DYZ19 ***
24109966-G-A 21963819-G-A P3_b1 ***
25526043-T-G 23379896-T-G P1_gr1 ***
24113319-T-C 21967172-T-C P3_b1 ***
25520369-T-G 23374222-T-G P1_gr1 ***
25231808-T-C 23085661-T-C P2_r1 ***
25505774-G-T 23359627-G-T P1_gr1 ***
22358359-C-T 20196473-C-T DYZ19 ***
22358366-G-C 20196480-G-C DYZ19 ***
24143039-A-G 21996892-A-G P3_b1 ***
25456371-C-A 23310224-C-A P2_r2 ***
25310499-G-A 23164352-G-A P2_r1 ***
22361404-C-A 20199518-C-A DYZ19 ***
25287895-G-A 23141748-G-A P2_r1 ***
25246723-A-C 23100576-A-C P2_r1 ***
22361419-C-T 20199533-C-T DYZ19 ***
22364438-G-T 20202552-G-T DYZ19 ***
25231917-A-G 23085770-A-G P2_r1 ***
22352662-G-T 20190776-G-T DYZ19 ***
58837757-T-A 56753114-A-T ***
27651586-C-A 25505439-C-A P1_Y2 ***
13485554-GTGG-ATGT 11329878-GTGG-ATGT ***
16868741-TTATACATA-T 14756861-TTATACATA-T ***
16838966-G-GAAAT 14727086-G-GAAAT ***
15799163-CCTT-C 13687283-CCTT-C ***
15364058-TCA-T 13252178-TCA-T ***
14937873-C-CTTTTCTTTTG 12825948-C-CTTTTCTTTTG ***
14645425-GTTTTT-G 12533489-GTTTTT-G ***
14610898-T-TACAA 12499104-T-TACAA ***
13840824-T-TGGAAA 11720118-T-TGGAAA ***
13838180-T-TGGAAG 11717474-T-TGGAAG ***
13838166-G-GGAAAT 11717460-G-GGAAAT ***
13724151-ACC-TCG 11568475-ACC-TCG ***
13616426-GT-ATA 11460750-GT-ATA ***
13489363-CTTCTCCCC-GTTCCACT 11333687-CTTCTCCCC-GTTCCACT ***
13488814-CCGGACCCG-TGGAACACA 11333138-CCGGACCCG-TGGAACACA ***
13471838-ATACT-TTGCC 11316162-ATACT-TTGCC ***
17707375-TCAAAA-T 15595495-TCAAAA-T ***
13471806-AC-GT 11316130-AC-GT ***
13461206-GGCC-AGCG 11305530-GGCC-AGCG ***
13461179-GATACA-CATATC 11305503-GATACA-CATATC ***
13461141-CTAG-TTAT 11305465-CTAG-TTAT ***
13456025-A-ATTCCT 11300349-A-ATTCCT ***
13456020-A-ATTCCT 11300344-A-ATTCCT ***
13454813-A-ATTCCC 11299137-A-ATTCCC ***
13454807-T-TACTCC 11299131-T-TACTCC ***
13205597-TAT-AAA 11049921-TAT-AAA ***
13142948-G-GCATTCCATTC 10632434-G-GCATTCCATTC 11×CATTC***
9398651-A-AT 9561042-A-AT ***
8814916-CT-C 8946875-CT-C 8×T***
8690237-T-TTG 8822196-T-TTG ***
8666723-GTTTTT-G 8798682-GTTTTT-G 25×T***
17275760-A-AGGGAC 15163880-A-AGGGAC ***
17802165-GTAAAAAAA-G 15690285-GTAAAAAAA-G ***
8218181-CTCTT-C 8350140-CTCTT-C ***
22341394-A-GT 20179508-A-GT DYZ19 ***
58906053-TT-CC 56684817-AA-GG ***
58903484-GTCCATTCCAT-G 56687372-CTGGAATGGAA-C ***
58881574-GTCCATTCCATTCCATTACAGTCCATTCCAATCCCTTCCATTCCTTTGCCTTCCATTCGAA-G 56709224-AGAATGGAATGGATTCGAATGGAAGGCAAAGGAATGGAAGGGATTGGAATGGACTGTAATG-A ***
58876658-AC-CT 56714212-GT-AG ***
58862655-GTTAC-ATTAT 56728212-GTAAC-ATAAT ***
58848158-CCCATTCCATT-C 56742662-CAATGGAATGG-C 10×CCATT***
58837757-TATTC-AATTT 56753110-GAATA-AAATT ***
58823281-CCATCT-GCATTC 56767585-AGATGG-GAATGC ***
25605740-CA-C 23459593-CA-C P1_gr1 15×A***
23435181-G-TT 21273295-G-TT 20×T***
23316015-A-ACTTT 21154129-A-ACTTT ***
23181453-CA-C 21019567-CA-C 34×A***
23018099-GT-G 20856213-GT-G ***
22357675-TTCG-ATCA 20195789-TTCG-ATCA DYZ19 ***
22327804-GTGT-TTGA 20165918-GTGT-TTGA DYZ19 ***
18147537-T-TGG 16035657-T-TGG ***
22311258-AT-CC 20149372-AT-CC DYZ19 ***
22299275-C-CA 20137389-C-CA DYZ19 ***
22292824-TGAA-AGGG 20130938-TGAA-AGGG DYZ19 ***
22292760-AT-TC 20130874-AT-TC DYZ19 ***
22292750-AAGTCT-GTGTCC 20130864-AAGTCT-GTGTCC DYZ19 ***
22268200-GG-TA 20106314-GG-TA DYZ19 ***
22268168-AGT-TAC 20106282-AGT-TAC DYZ19 ***
22099673-T-TTATTAG 19937787-T-TTATTAG ***
21796157-TG-T 19634271-TG-T ***
21665724-T-TAAAC 19503838-T-TAAAC ***
20865354-C-CCA 18703468-C-CCA P4_Dst 18×CA***
20426351-CA-C 18264465-CA-C P5_Dst 19×A***
19753632-ACATG-CCATC 17641752-ACATG-CCATC P5_Prx ***
19127665-TATAC-T 17015785-TATAC-T ***
8218181-CTCTT-TTCTC 8350140-CTCTT-TTCTC ***
7394141-GTA-TTC 7526100-GTA-TTC ***
27651659-G-A 25505512-G-A P1_Y2 ***
58824988-A-T 56765883-T-A ***
58885971-C-A 56704900-G-T ***
58869353-T-C 56721518-A-G ***
58855789-A-T 56735082-T-A ***
58855687-T-C 56735184-A-G ***
58854578-G-T 56736293-C-A ***
58846896-A-T 56743975-T-A ***
58846800-C-A 56744071-G-T ***
58837820-T-C 56753051-A-G ***
58837761-C-T 56753110-G-A ***
22292750-A-G 20130864-A-G DYZ19 ***
58837731-A-G 56753140-T-C ***
58837627-T-C 56753244-A-G ***
58837572-C-T 56753299-G-A ***
58825017-T-C 56765854-A-G ***
58823715-C-G 56767156-G-C ***
58892984-G-A 56697887-C-T ***
58823281-C-G 56767590-G-C ***
28602211-G-T 26456064-G-T ***
28489824-G-A 26343677-G-A ***
28486604-T-C 26340457-T-C ***
28336662-C-A 26190515-C-A P1_b4 ***
28306524-C-T 26160377-C-T P1_b4 ***
28206822-A-G 26060675-A-G P1_b4 ***
28117261-G-T 25971114-G-T P1_b4 ***
28025169-G-A 25879022-G-A P1_Y2 11×A***
28008008-C-A 25861861-C-A P1_Y2 ***
27915904-T-G 25769757-T-G P1_Y2 ***
27915825-G-A 25769678-G-A P1_Y2 ***
27862085-A-C 25715938-A-C P1_Y2 ***
27826758-T-G 25680611-T-G P1_Y2 ***
58891017-A-G 56699854-T-C ***
58894677-G-T 56696194-C-A ***
7312578-AAGGGAGGGAGGGGAGAAGGG-A 7444537-AAGGGAGGGAGGGGAGAAGGG-A ***
3641037-C-CTTTCT 3772996-C-CTTTCT ***
6750962-TG-CA 6882921-TG-CA ***
6750948-GCC-ACA 6882907-GCC-ACA ***
6226090-T-TCTTC 6358049-T-TCTTC IR3_Dst ***
6127674-GTCT-G 6259633-GTCT-G ***
5937242-CTA-C 6069201-CTA-C 18×TA***
5937244-ATATA-CTC 6069203-ATATA-CTC ***
5937208-A-ATCTC 6069167-A-ATCTC 17×TC***
5569385-G-GAAAA 5701344-G-GAAAA 10×A***
5555645-CAAAA-C 5687604-CAAAA-C 18×A***
5240978-C-CCCTT 5372937-C-CCCTT 5×CTTT***
5204641-CAA-C 5336600-CAA-C 22×A***
4636107-ATAT-A 4768066-ATAT-A ***
4382449-CAAAA-C 4514408-CAAAA-C 17×A***
3679700-A-AAATC 3811659-A-AAATC ***
3571635-C-CA 3703594-C-CA ***
58898724-G-T 56692147-C-A ***
22996969-G-GATAT 20835083-G-GATAT 21×AT***
58903390-T-C 56687481-A-G ***
58903452-T-C 56687419-A-G ***
58903471-C-G 56687400-G-C ***
58903863-A-T 56687008-T-A ***
58913720-G-T 56677151-C-A ***
15565939-C-CA 13454059-C-CA 16×A***
14315408-A-AT 12194702-A-AT 16×T***
3311775-G-GC 3443734-G-GC ***
4729346-CT-C 4861305-CT-C 12×T***
28237962-AG-A 26091815-AG-A P1_b4 ***
5273214-CT-C 5405173-CT-C 23×T***
22341375-GT-TC 20179489-GT-TC DYZ19 ***
16978999-GA-G 14867119-GA-G 14×A***
2915036-TTCCTTC-T 3046995-TTCCTTC-T ***
22292751-A-T 20130865-A-T DYZ19 ***
20472540-G-T 18310654-G-T P5_Dst ***
22268222-A-T 20106336-A-T DYZ19 ***
2803343-A-G 2935302-A-G ***
5813749-C-T 5945708-C-T ***
5701651-A-G 5833610-A-G ***
5570333-T-C 5702292-T-C ***
5065182-G-T 5197141-G-T ***
4740177-G-A 4872136-G-A ***
4431082-A-T 4563041-A-T ***
4019814-C-A 4151773-C-A ***
4019791-A-T 4151750-A-T ***
3459410-C-A 3591369-C-A ***
3459060-T-C 3591019-T-C ***
3128453-C-A 3260412-C-A ***
2810407-C-T 2942366-C-T ***
2810404-C-T 2942363-C-T ***
2678800-T-C 2810759-T-C ***
6151681-C-A 6283640-C-A IR3_Dst ***
2677886-G-T 2809845-G-T ***
22292827-A-G 20130941-A-G DYZ19 ***
22297098-T-A 20135212-T-A DYZ19 ***
14631127-G-A 12519196-G-A ***
13471853-G-C 11316177-G-C ***
22342527-C-G 20180641-C-G DYZ19 ***
13616422-C-T 11460746-C-T ***
13267546-T-C 11111870-T-C ***
13267570-T-A 11111894-T-A ***
13223014-A-G 11067338-A-G ***
22297702-T-A 20135816-T-A DYZ19 ***
22297708-T-A 20135822-T-A DYZ19 ***
22297714-T-C 20135828-T-C DYZ19 ***
5813764-C-T 5945723-C-T ***
6495261-A-G 6627220-A-G ***
28117202-A-T 25971055-A-T P1_b4 ***
8062963-A-G 8194922-A-G ***
9677390-A-C 9839781-A-C IR3_Prx ***
9592368-G-T 9754759-G-T IR3_Prx ***
9592327-G-T 9754718-G-T IR3_Prx ***
9556871-A-G 9719262-A-G IR3_Prx ***
9540132-T-G 9702523-T-G IR3_Prx ***
9374333-T-C 9536724-T-C ***
9324119-G-A 9486510-G-A ***
9230860-A-G 9393251-A-G ***
9224819-C-A 9387210-C-A ***
9200092-G-T 9362483-G-T ***
8972292-T-C 9134683-T-C ***
8218185-T-C 8350144-T-C ***
8137063-G-A 8269022-G-A ***
7573239-C-A 7705198-C-A ***
6622886-T-A 6754845-T-A ***
7443652-A-C 7575611-A-C ***
7394014-G-C 7525973-G-C ***
7373303-G-T 7505262-G-T ***
7277085-C-A 7409044-C-A ***
7121472-C-G 7253431-C-G ***
7121415-G-A 7253374-G-A ***
7061915-T-A 7193874-T-A ***
6915826-A-G 7047785-A-G ***
6750996-A-G 6882955-A-G ***
6750990-A-G 6882949-A-G ***
6750963-G-A 6882922-G-A ***
6750962-T-C 6882921-T-C ***
6750950-C-A 6882909-C-A ***
6750948-G-A 6882907-G-A ***
13737661-A-T 11581985-A-T ***
13489671-T-C 11333995-T-C ***
10015026-C-A 10177417-C-A ***
58852260-C-G 56738611-G-C ***
20737530-G-C 18575644-G-C P4_Prx ***
13488779-C-A 11333103-C-A ***
22249121-G-T 20087235-G-T DYZ19 ***
22341704-G-T 20179818-G-T DYZ19 ***
13485588-G-T 11329912-G-T ***
22292779-C-T 20130893-C-T DYZ19 ***
22292760-A-T 20130874-A-T DYZ19 ***
58872916-T-C 56717955-A-G ***
21687989-G-C 19526103-G-C ***
13258354-G-A 11102678-G-A ***
6430439-T-TTA 6562398-T-TTA 19×TA***
28577950-T-TAC 26431803-T-TAC 17×AC***
22297702-TGAATGT-AGAGTGA 20135816-TGAATGT-AGAGTGA DYZ19 ***
22297684-T-A 20135798-T-A DYZ19 ***
22247112-A-T 20085226-A-T DYZ19 ***
22297705-A-G 20135819-A-G DYZ19 ***
22297717-A-T 20135831-A-T DYZ19 ***
58820272-C-T 56770599-G-A ***
20084465-C-T 17972585-C-T P5_Dst ***
8218013-TTTTCTTTC-T 8349972-TTTTCTTTC-T 15×TTTC***
58979964-C-T 56833817-C-T ***
25747106-G-A 23600959-G-A P1_b3 ***
13724052-G-T 11568376-G-T ***
22357834-C-A 20195948-C-A DYZ19 ***
25955976-CTGTG-C 23809829-CTGTG-C P1_Y1 16×TG***
58824981-A-C 56765890-T-G ***
13461141-C-T 11305465-C-T ***
20013059-G-T 17901179-G-T P5_Prx ***
24278260-A-AAG 22132113-A-AAG P3_b1 ***
22221464-G-T 20059578-G-T DYZ19 ***
22250353-T-A 20088467-T-A DYZ19 ***
13267493-G-A 11111817-G-A ***
9295791-C-A 9458182-C-A ***
25466376-T-G 23320229-T-G P2_r2 ***
28117258-G-T 25971111-G-T P1_b4 ***
16651433-CTTTT-C 14539553-CTTTT-C 16×T***
23293598-GTA-G 21131712-GTA-G 20×TA***
13724179-TG-AC 11568503-TG-AC ***
22264032-GT-G 20102146-GT-G DYZ19 ***
13488775-CCTCC-GCTCA 11333099-CCTCC-GCTCA ***
13488762-CCACC-TCACT 11333086-CCACC-TCACT ***
22292789-C-G 20130903-C-G DYZ19 ***
13488775-C-G 11333099-C-G ***
13488766-C-T 11333090-C-T ***
13488762-C-T 11333086-C-T ***
28369982-T-TTA 26223835-T-TTA P1_gr2 17×TA***
59001389-AAAG-A 56855242-AAAG-A ***
22282949-A-G 20121063-A-G DYZ19 ***
28577852-A-G 26431705-A-G ***
13267524-A-G 11111848-A-G ***
13267486-A-AG 11111810-A-AG ***
13267464-GT-G 11111788-GT-G ***
13267251-G-A 11111575-G-A ***
13260372-T-A 11104696-T-A ***
13260314-G-A 11104638-G-A ***
13260296-T-G 11104620-T-G ***
13223482-G-A 11067806-G-A ***
24782876-A-G 22636729-A-G P3_b2 ***
58884885-A-C 56705986-T-G ***
25363877-C-T 23217730-C-T P2_r2 ***
22308147-G-C 20146261-G-C DYZ19 ***
22284355-A-T 20122469-A-T DYZ19 ***
9947873-C-T 10110264-C-T ***
10033416-G-T 10195807-G-T ***
22268193-G-T 20106307-G-T DYZ19 ***
19755243-C-A 17643363-C-A P5_Prx ***
20358902-A-G 18197016-A-G P5_Dst ***
20243244-G-A 18081358-G-A P5_Dst ***
20131352-A-C 18019472-A-C P5_Dst ***
20084727-G-T 17972847-G-T P5_Dst ***
20084639-A-T 17972759-A-T P5_Dst ***
20084607-G-T 17972727-G-T P5_Dst ***
20084592-A-T 17972712-A-T P5_Dst ***
20084583-G-T 17972703-G-T P5_Dst ***
20025319-A-G 17913439-A-G P5_Prx ***
19926996-G-T 17815116-G-T P5_Prx ***
19853523-C-A 17741643-C-A P5_Prx ***
19853447-G-C 17741567-G-C P5_Prx ***
19771692-A-G 17659812-A-G P5_Prx ***
19753627-G-A 17641747-G-A P5_Prx ***
20426098-T-G 18264212-T-G P5_Dst ***
19753620-A-C 17641740-A-C P5_Prx ***
19753614-C-A 17641734-C-A P5_Prx ***
19720355-T-A 17608475-T-A P5_Prx ***
19663764-T-G 17551884-T-G P5_Prx ***
19611257-G-T 17499377-G-T P5_Prx ***
19583960-T-C 17472080-T-C P5_Prx ***
19352963-T-C 17241083-T-C ***
19304447-A-G 17192567-A-G ***
19176157-G-A 17064277-G-A ***
19138460-G-T 17026580-G-T ***
19097688-C-T 16985808-C-T ***
18480506-G-T 16368626-G-T P6_Dst ***
18352965-G-C 16241085-G-C P6_Prx ***
18344261-A-T 16232381-A-T P6_Prx ***
20377708-T-A 18215822-T-A P5_Dst ***
20426120-C-A 18264234-C-A P5_Dst ***
18317073-G-T 16205193-G-T P6_Prx ***
20998284-G-A 18836398-G-A P4_Dst ***
22234913-C-A 20073027-C-A DYZ19 ***
22227894-C-T 20066008-C-T DYZ19 ***
22227878-T-C 20065992-T-C DYZ19 ***
22197772-T-C 20035886-T-C ***
21997087-T-A 19835201-T-A ***
21996786-T-G 19834900-T-G ***
21829908-C-A 19668022-C-A ***
21474835-T-C 19312949-T-C ***
21448885-T-C 19286999-T-C ***
21377051-T-A 19215165-T-A ***
21273636-G-A 19111750-G-A ***
21198789-A-G 19036903-A-G ***
21197049-C-A 19035163-C-A ***
20949849-G-A 18787963-G-A P4_Dst ***
20426330-T-G 18264444-T-G P5_Dst ***
20943241-A-G 18781355-A-G P4_Dst ***
20873664-A-T 18711778-A-T P4_Dst ***
20752808-G-A 18590922-G-A P4_Prx ***
20747911-A-C 18586025-A-C P4_Prx ***
20697716-T-G 18535830-T-G P4_Prx ***
20645880-A-T 18483994-A-T P4_Prx ***
20632629-T-A 18470743-T-A P4_Prx ***
20618059-G-T 18456173-G-T P4_Prx ***
20615415-C-G 18453529-C-G P4_Prx ***
20534497-G-T 18372611-G-T P5_Dst ***
20534225-G-A 18372339-G-A P5_Dst ***
26834853-AAAGG-A 24688706-AAAGG-A P1_g2 11×AAGG***
20438866-C-T 18276980-C-T P5_Dst ***
20438748-G-A 18276862-G-A P5_Dst ***
18318092-C-T 16206212-C-T P6_Prx ***
18001790-G-T 15889910-G-T P7_Gap ***
10041578-G-A 10203969-G-A ***
13471838-A-T 11316162-A-T ***
13740852-T-G 11585176-T-G ***
13733644-T-A 11577968-T-A ***
13606785-C-A 11451109-C-A ***
13489418-C-G 11333742-C-G ***
13489399-G-T 11333723-G-T ***
13489395-C-G 11333719-C-G ***
13489376-C-T 11333700-C-T ***
13489369-C-A 11333693-C-A ***
13489363-C-G 11333687-C-G ***
13489309-G-T 11333633-G-T ***
13488903-T-A 11333227-T-A ***
13488817-G-A 11333141-G-A ***
13471840-A-G 11316164-A-G ***
13471830-A-T 11316154-A-T ***
13981235-T-C 11860529-T-C ***
13471823-C-A 11316147-C-A ***
13471797-G-C 11316121-G-C ***
13465778-C-T 11310102-C-T ***
13461088-A-G 11305412-A-G ***
13460960-G-T 11305284-G-T ***
13460934-G-A 11305258-G-A ***
13312285-C-A 11156609-C-A ***
13253273-G-T 11097597-G-T ***
13223252-A-G 11067576-A-G ***
13222083-A-G 11066407-A-G ***
13201948-G-A 11046272-G-A ***
13121324-T-G 10610810-T-G ***
13115007-G-T 10604493-G-T ***
10103037-T-A 10265428-T-A ***
13878099-A-T 11757393-A-T ***
14113232-C-T 11992526-C-T ***
17998305-A-G 15886425-A-G P7_Gap ***
15804240-A-G 13692360-A-G ***
17700771-T-C 15588891-T-C ***
17268365-A-T 15156485-A-T ***
17228047-G-T 15116167-G-T ***
17067610-G-A 14955730-G-A ***
16978694-G-T 14866814-G-T ***
16685070-C-A 14573190-C-A ***
16498310-G-T 14386430-G-T ***
16210666-T-A 14098786-T-A ***
16161361-C-T 14049481-C-T P8_Dst ***
16135521-A-G 14023641-A-G P8_Dst ***
16105661-C-G 13993781-C-G P8_Prx ***
16069449-C-A 13957569-C-A ***
15952709-C-T 13840829-C-T ***
15676501-C-T 13564621-C-T ***
14131393-T-C 12010687-T-C ***
15297088-A-C 13185187-A-C ***
15296286-T-C 13184385-T-C ***
15245213-A-G 13133299-A-G ***
15245183-T-C 13133269-T-C ***
15150461-A-C 13038548-A-C ***
15117026-T-A 13005113-T-A ***
14703662-A-G 12591728-A-G ***
14683572-C-T 12571638-C-T ***
14441088-G-T 12320361-G-T ***
14390975-T-A 12270271-T-A ***
14247181-A-T 12126475-A-T ***
14181054-G-T 12060348-G-T ***
14180969-T-A 12060263-T-A ***
14155781-G-T 12035075-G-T ***
58916176-TGAGTCCATTCCAT-CGAG 56674682-ATGGAATGGACTCA-CTCG ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Haplotype Progression

The data below reveals the progression of changes in the haplotype. The bottom row is the haplotype for this man and above him are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are very much a work in progress, and any suggested modifications are appreciated. I think we can use our vast collection of haplotype data to refine these haplotypes. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

DYS393
DYS390
DYS19
DYS391
DYS385
DYS426
DYS388
DYS439
DYS389i
DYS392
DYS389ii
DYS458
DYS459
DYS455
DYS454
DYS447
DYS437
DYS448
DYS449
DYS464
DYS460
Y-GATA-H4
YCAII
DYS456
DYS607
DYS576
DYS570
CDY
DYS442
DYS438
DYS531
DYS578
DYF395S1
DYS590
DYS537
DYS641
DYS472
DYF406S1
DYS511
DYS425
DYS413
DYS557
DYS594
DYS436
DYS490
DYS534
DYS450
DYS444
DYS481
DYS520
DYS446
DYS617
DYS568
DYS487
DYS572
DYS640
DYS492
DYS565
DYS710
DYS485
DYS632
DYS495
DYS540
DYS714
DYS716
DYS717
DYS505
DYS556
DYS549
DYS589
DYS522
DYS494
DYS533
DYS636
DYS575
DYS638
DYS462
DYS452
DYS445
Y-GATA-A10
DYS463
DYS441
Y-GGAAT-1B07
DYS525
DYS712
DYS593
DYS650
DYS532
DYS715
DYS504
DYS513
DYS561
DYS552
DYS726
DYS635
DYS587
DYS643
DYS497
DYS510
DYS434
DYS461
DYS435
P312/S1161324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123315916122626191211131210912121011113012132413101020151913241712152412231810141791211
L21/S1451324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123515916122526191211131211912121011113012132413101020151913241712152412231810141791211
Hoy1225141111-13121213131429179-1011112515182915-16-16-16111019-231715181737-39121211915-1681010810101221-231610121216812252013121113111112123417916122426191211121211912121011113012142414101020151913241713152412231810141791211

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: N1125051031330874083837466579
Kit: 97TRM*16000000100000008300000
Used in age calculations16000000100000008300000
Counts of SNPs119
Variant counts last updated 2017-09-19 23:23:20.

* BED data not available. Using default values.


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