Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > ZZ12 > ZZ19 > Z31644 > Z42772 > Z37492 > FGC23535

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
N4591
FTDNA
N4591
FGC
L6CA8
22231831-C-A 20069945-C-A DYZ19 A****
22265798-A-T 20103912-A-T DYZ19 A*
22274430-G-A 20112544-G-A DYZ19 A*
22282516-G-T 20120630-G-T DYZ19 A*
28816644-G-T 26670497-G-T A*
6343784-C-A 6475743-C-A A*
22232766-C-T 20070880-C-T DYZ19 A****
18343444-A-C 16231564-A-C P6_Prx A****
28793951-G-A 26647804-G-A A*
22313326-C-A 20151440-C-A DYZ19 A****
28816972-G-T 26670825-G-T A*
23123393-G-T 20961507-G-T FGC40706 YY+++
16214334-C-T 14102454-C-T FGC40697 Y+
10011732-T-G 10174123-T-G FGC40686 Y+
16847705-G-C 14735825-G-C FGC40700 Y+
23336663-TG-T 21174777-TG-T FGC23546 +++
22442181-T-A 20280295-T-A DYZ19 ++**
22948810-C-A 20786924-C-A FGC23544 YY+++
22775914-A-G 20614028-A-G FGC23543 YY+++
22507621-C-T 20345735-C-T FGC40705 DYZ19 +**+
22465452-T-C 20303566-T-C FGC23542 DYZ19 +++
15794835-C-T 13682955-C-T FGC40696 Y+
16002416-G-A 13890536-G-A M6668 Y+
9813372-G-A 9975763-G-A FGC40685 YY**+
19337718-AG-A 17225838-AG-A FGC40708 **+
4310897-G-A 4442856-G-A FGC40681 +
6775214-G-A 6907173-G-A FGC40684 Y19464 YY**+
19480088-C-T 17368208-C-T FGC23536 YY++
13549570-G-A 11393894-G-A FGC40687 +
13603119-T-G 11447443-T-G FGC40688 +
5855998-T-G 5987957-T-G FGC40683 +
5457974-G-A 5589933-G-A FGC40682 +
4074029-A-G 4205988-A-G FGC40680 +
15940103-C-G 13828223-C-G FGC40677 YY+
3879489-G-A 4011448-G-A FGC40679 +
21266876-T-G 19104990-T-G Y56441 YY+**
21266874-T-G 19104988-T-G Y56440 YY+**
5214373-C-T 5346332-C-T FGC40678 Y19463 **+
14142573-C-T 12021867-C-T FGC40691 YY**+
21815372-G-A 19653486-G-A FGC23541 YY**++
14649796-G-A 12537861-G-A FGC40694 YY++
14646431-G-A 12534495-G-A FGC40693 YY++
16423815-C-T 14311935-C-T FGC40698 Y**+
21814516-G-C 19652630-G-C FGC23540 YY+++
14551320-C-T 12439521-C-T FGC23528 YY+++
14159968-G-C 12039262-G-C FGC40692 Y+**+
14622685-A-C 12510883-A-C FGC23529 YY+++
13693713-G-A 11538037-G-A FGC23526 +***+
7145558-C-T 7277517-C-T FGC23525 YY+++
15123071-C-T 13011158-C-T FGC23530 YY+++
15270594-A-T 13158683-A-T FGC23531 YY+++
15387259-T-C 13275379-T-C FGC23524 YY+++
15438521-A-C 13326641-A-C FGC40695 YY+++
15509695-G-A 13397815-G-A FGC23532 YY+++
16645428-A-G 14533548-A-G FGC23533 YY+++
16803085-A-T 14691205-A-T FGC40699 YY+++
9172332-T-C 9334723-T-C FGC24503 Y+
17363486-A-G 15251606-A-G FGC40701 Y19465 YY+++
17820486-G-A 15708606-G-A FGC23534 YY+++
21718081-A-G 19556195-A-G FGC23539 YY+++
13846445-G-A 11725739-G-A FGC40689 ++
13207-G-T +
17637901-G-T 15526021-G-T FGC40702 YY**+
21615716-C-T 19453830-C-T FGC23538 YY+++
14187514-C-A 12066808-C-A FGC23527 YY+++
17823032-T-G 15711152-T-G FGC40703 Y*
22422475-T-A 20260589-T-A BY26433 DYZ19 *
14017291-G-C 11896585-G-C FGC40690 Y*
10767712-A-C **
10886842-A-C **
10893135-C-A **
9631728-T-G 9794119-T-G IR3_Prx **
10887342-C-A **
10887331-T-C **
9666582-TA-T 9828973-TA-T IR3_Prx **
9732211-A-G 9894602-A-G IR3_Prx **
10881147-C-A **
10899480-C-A **
10881143-C-A **
9771956-T-A 9934347-T-A **
10879915-C-T **
9928136-A-T 10090527-A-T **
9932555-C-A 10094946-C-A **
10879735-T-A **
10899454-A-C **
10899988-T-G **
10857798-C-T **
10940119-C-G **
10951773-C-G **
10949558-C-A **
10948135-C-G **
10948131-C-G **
10943011-C-A **
10942438-C-A **
10927131-G-A **
10905514-G-T **
10925583-C-G **
10671445-C-T **
10678511-A-G **
9513344-C-A 9675735-C-A **
10914462-G-T **
9533732-C-A 9696123-C-A IR3_Prx **
9631683-G-T 9794074-G-T IR3_Prx **
10859520-C-A **
10844817-C-A **
10776642-C-A **
10792937-T-G **
10801725-T-A **
10666353-T-G **
10794653-C-A **
10744806-T-C **
10794636-C-A **
10794570-C-G **
10776716-C-A **
10805171-A-G **
10744828-A-G **
10748412-C-A **
10776685-T-C **
10776683-A-C **
10755087-C-T **
10762604-C-A **
10744770-C-A **
10691265-A-G **
9934305-G-A 10096696-G-A **
9971729-C-A 10134120-C-A **
10827704-G-C **
10827634-C-G **
10827588-T-A **
10824260-T-C **
9945533-C-A 10107924-C-A **
10822575-C-T **
10816217-C-A **
10679239-C-CTCCAA **
10025265-A-C 10187656-A-C **
10031277-C-A 10193668-C-A **
10679232-C-A **
10814567-A-T **
10629783-T-A **
10655300-T-G **
10814565-T-C **
2718924-GC-G 2850883-GC-G **
11014976-G-A **
10970733-A-G **
13846999-G-T 11726293-G-T **
14006575-C-A 11885869-C-A **
13988934-A-C 11868228-A-C **
13974181-G-T 11853475-G-T **
13941220-G-T 11820514-G-T **
13941206-G-T 11820500-G-T **
13932766-T-G 11812060-T-G **
13900031-C-A 11779325-C-A **
13870854-G-T 11750148-G-T **
13828371-C-A 11707665-C-A **
14098703-T-A 11977997-T-A **
13809246-ATGTAG-A 11688540-ATGTAG-A **
13803327-G-A 11682621-G-A **
11675860-T-C **
11675571-G-T **
11671593-A-C **
11663384-C-A **
11653957-G-A **
11652398-T-G **
14047304-A-C 11926598-A-C **
14142438-A-G 12021732-A-G **
11647298-A-G **
14352619-C-A 12231914-C-A **
14482227-T-G 12361496-T-G **
14482205-A-C 12361474-A-C **
14451675-T-G 12330948-T-G **
14425695-A-G 12304970-A-G **
14425693-G-T 12304968-G-T **
14385374-G-T 12264670-G-T **
14369137-G-A 12248433-G-A **
14363398-C-A 12242693-C-A **
14324332-T-G 12203626-T-G **
14152217-A-C 12031511-A-C **
14324330-A-C 12203624-A-C **
14324327-T-G 12203621-T-G **
14313713-C-A 12193007-C-A **
14300235-C-T 12179529-C-T **
14273078-C-G 12152372-C-G **
14267029-C-A 12146323-C-A **
14225285-T-C 12104579-T-C **
14213904-T-G 12093198-T-G **
14200386-C-A 12079680-C-A **
11651668-G-A **
11647250-G-T **
10971708-A-T **
10991725-C-A **
11025863-T-C **
11025797-C-A **
11014981-G-T **
11014929-C-G **
11001998-C-A **
11000521-C-A **
10992520-T-G **
10992474-A-AG **
10991722-T-C **
11026655-G-A **
10991714-C-A **
10991710-A-C **
10991699-C-A **
10991690-C-A **
10991669-C-A **
10991121-G-T **
10991083-T-G **
10986075-A-T **
10971828-C-A **
11025867-C-T **
13195959-A-C 11040283-A-C **
13575632-G-T 11419956-G-T **
13258762-A-G 11103086-A-G **
13512950-C-G 11357274-C-G **
13480508-C-T 11324832-C-T **
13417337-A-C 11261661-A-C **
13308782-A-C 11153106-A-C **
13297624-C-G 11141948-C-G **
13287240-G-T 11131564-G-T **
13287230-T-A 11131554-T-A **
13287217-A-T 11131541-A-T **
13256393-T-A 11100717-T-A **
13195966-T-C 11040290-T-C **
13256389-C-T 11100713-C-T **
13234491-T-C 11078815-T-C **
13231800-T-A 11076124-T-A **
13231572-A-C 11075896-A-C **
13217777-C-T 11062101-C-T **
13213254-G-T 11057578-G-T **
13206328-G-T 11050652-G-T **
13206305-G-T 11050629-G-T **
13206298-C-A 11050622-C-A **
9512004-C-G 9674395-C-G **
8286848-A-G 8418807-A-G **
9509570-A-C 9671961-A-C **
5312909-A-C 5444868-A-C **
5336801-G-T 5468760-G-T **
5318304-T-A 5450263-T-A **
5318300-G-C 5450259-G-C **
5318213-C-A 5450172-C-A **
5317095-C-A 5449054-C-A **
5312972-T-C 5444931-T-C **
5312944-G-C 5444903-G-C **
5196747-G-T 5328706-G-T **
5562602-C-A 5694561-C-A **
5195895-A-G 5327854-A-G **
5195831-A-C 5327790-A-C **
5195817-G-T 5327776-G-T **
5195808-A-C 5327767-A-C **
4989669-C-A 5121628-C-A **
4989556-CT-C 5121515-CT-C **
4944795-G-A 5076754-G-A **
4919603-G-T 5051562-G-T **
5426295-C-A 5558254-C-A **
5586605-C-G 5718564-C-G **
4841420-G-T 4973379-G-T **
6130573-T-G 6262532-T-G **
6582762-T-C 6714721-T-C **
6309956-G-C 6441915-G-C IR3_Dst **
6305926-A-T 6437885-A-T IR3_Dst **
6305922-A-T 6437881-A-T IR3_Dst **
6279460-A-T 6411419-A-T IR3_Dst **
6279354-G-C 6411313-G-C IR3_Dst **
6279347-G-T 6411306-G-T IR3_Dst **
6130563-C-T 6262522-C-T **
5644975-A-C 5776934-A-C **
6106141-T-C 6238100-T-C **
6102409-G-T 6234368-G-T **
6068718-C-A 6200677-C-A **
5957381-G-C 6089340-G-C **
5957061-C-A 6089020-C-A **
5915464-C-A 6047423-C-A **
5888182-T-G 6020141-T-G **
5874204-T-C 6006163-T-C **
4899686-C-A 5031645-C-A **
4671829-G-T 4803788-G-T **
6763809-A-C 6895768-A-C **
3151862-A-G 3283821-A-G **
3397371-G-T 3529330-G-T **
3397365-T-G 3529324-T-G **
3385557-C-T 3517516-C-T **
3343393-G-T 3475352-G-T **
3332145-T-A 3464104-T-A **
3277120-T-G 3409079-T-G **
3271755-A-C 3403714-A-C **
3123146-G-A 3255105-G-A **
3435908-C-A 3567867-C-A **
3123124-T-C 3255083-T-C **
3123114-T-C 3255073-T-C **
3123103-C-A 3255062-C-A **
3123071-A-C 3255030-A-C **
3114044-C-A 3246003-C-A **
2989474-G-T 3121433-G-T **
2971279-C-A 3103238-C-A **
2906636-C-A 3038595-C-A **
3435842-A-G 3567801-A-G **
3593272-G-C 3725231-G-C **
4671811-G-T 4803770-G-T **
4201145-G-A 4333104-G-A **
4567081-G-T 4699040-G-T **
4567080-T-G 4699039-T-G **
4455069-C-A 4587028-C-A **
4357888-G-T 4489847-G-T **
4293541-C-A 4425500-C-A **
4287374-T-G 4419333-T-G **
4201162-G-T 4333121-G-T **
4201111-T-G 4333070-T-G **
3619518-T-C 3751477-T-C **
4123858-GA-G 4255817-GA-G **
4083933-A-T 4215892-A-T **
3701023-G-T 3832982-G-T **
3680538-G-T 3812497-G-T **
3680536-C-G 3812495-C-G **
3680531-G-T 3812490-G-T **
3663248-C-A 3795207-C-A Y60552 **
3648744-C-A 3780703-C-A **
6729839-T-G 6861798-T-G **
6765589-C-A 6897548-C-A **
9509568-C-A 9671959-C-A **
8286847-A-G 8418806-A-G **
8665655-C-A 8797614-C-A **
8387614-A-C 8519573-A-C **
8353174-A-C 8485133-A-C **
8353171-C-A 8485130-C-A **
8350765-C-A 8482724-C-A **
8290978-T-G 8422937-T-G **
14499480-C-G 12387685-C-G **
8286846-G-T 8418805-G-T **
8762063-G-T 8894022-G-T **
8286843-G-T 8418802-G-T **
8269554-A-T 8401513-A-T **
8267318-G-T 8399277-G-T **
8267301-A-G 8399260-A-G **
8112602-C-A 8244561-C-A **
8058584-G-T 8190543-G-T **
8058541-C-G 8190500-C-G **
7781662-C-G 7913621-C-G **
8706907-T-G 8838866-T-G **
8774578-GGGTTTCACC-G 8906537-GGGTTTCACC-G **
7723817-AG-A 7855776-AG-A **
9356683-C-A 9519074-C-A **
9509545-C-A 9671936-C-A **
9509544-C-G 9671935-C-G **
9509428-A-G 9671819-A-G **
9498885-C-A 9661276-C-A **
9426694-T-G 9589085-T-G **
9426649-C-A 9589040-C-A **
9417028-C-T 9579419-C-T **
9356660-C-A 9519051-C-A **
8842458-C-A 8974417-C-A **
9356647-G-C 9519038-G-C **
9356641-C-A 9519032-C-A **
9215123-C-A 9377514-C-A **
9079353-C-A 9241744-C-A **
9069981-C-T 9232372-C-T **
9014284-C-G 9176675-C-G **
9111358-T-C **
8908091-G-C 9040050-G-C **
7723819-AG-A 7855778-AG-A **
7709905-C-A 7841864-C-A **
6765611-C-G 6897570-C-G **
7000289-A-T 7132248-A-T **
7132099-G-A 7264058-G-A **
7132063-G-C 7264022-G-C **
7104920-C-A 7236879-C-A **
7081881-C-G 7213840-C-G **
7053003-G-A 7184962-G-A **
7040594-G-T 7172553-G-T **
7011538-C-G 7143497-C-G **
6989306-G-A 7121265-G-A **
7167671-G-C 7299630-G-C **
6981399-GA-G 7113358-GA-G **
6978426-T-C 7110385-T-C **
6972662-G-T 7104621-G-T **
6972647-G-T 7104606-G-T **
6825599-G-T 6957558-G-T **
6795231-A-C 6927190-A-C **
6795202-C-A 6927161-C-A **
6787028-C-A 6918987-C-A **
7145718-G-T 7277677-G-T **
7172625-T-G 7304584-T-G **
7664826-G-T 7796785-G-T **
7411400-G-T 7543359-G-T **
7664819-G-T 7796778-G-T **
7646753-T-G 7778712-T-G **
7626232-G-C 7758191-G-C **
7519111-G-A 7651070-G-A **
7499936-C-A 7631895-C-A IR1_L **
7431619-A-T 7563578-A-T **
7422210-T-C 7554169-T-C **
7411412-G-T 7543371-G-T **
7353008-C-A 7484967-C-A **
7179958-T-C 7311917-T-C **
7338648-C-A 7470607-C-A **
7314637-T-G 7446596-T-G **
7314477-C-A 7446436-C-A **
7314471-A-C 7446430-A-C **
7314425-G-C 7446384-G-C **
7311632-C-A 7443591-C-A **
7209166-C-A 7341125-C-A **
7182303-G-T 7314262-G-T **
14488394-C-A 12367663-C-A FGC64410 **
15400282-C-A 13288402-C-A **
14499484-C-A 12387689-C-A **
21323239-C-A 19161353-C-A **
21596529-A-G 19434643-A-G **
21596521-A-G 19434635-A-G **
21596517-C-G 19434631-C-G **
21596513-G-T 19434627-G-T **
21596505-T-G 19434619-T-G **
21526961-A-G 19365075-A-G **
21491065-A-C 19329179-A-C **
21316854-G-A 19154968-G-A **
21682201-C-G 19520315-C-G **
21285418-T-A 19123532-T-A **
21283089-C-A 19121203-C-A **
21222108-T-C 19060222-T-C **
21211747-C-T 19049861-C-T **
21211725-C-A 19049839-C-A **
21124173-G-T 18962287-G-T **
21124133-A-G 18962247-A-G **
21124127-C-G 18962241-C-G **
21596537-T-G 19434651-T-G **
21682308-C-A 19520422-C-A **
20970354-A-G 18808468-A-G P4_Dst **
22099807-G-A 19937921-G-A **
22237673-A-C 20075787-A-C DYZ19 **
22237659-A-G 20075773-A-G DYZ19 **
22237655-A-C 20075769-A-C DYZ19 **
22199290-G-T 20037404-G-T **
22170163-G-T 20008277-G-T **
22147790-T-G 19985904-T-G **
22125814-C-A 19963928-C-A **
22085476-C-A 19923590-C-A **
21775146-T-G 19613260-T-G **
22044158-C-A 19882272-C-A **
22027701-C-A 19865815-C-A **
22027644-A-C 19865758-A-C **
21991493-A-G 19829607-A-G **
21986430-C-A 19824544-C-A **
21985184-T-G 19823298-T-G **
21953605-C-A 19791719-C-A **
21818910-G-A 19657024-G-A **
21073363-C-A 18911477-C-A **
20970306-A-G 18808420-A-G P4_Dst **
22353357-T-C 20191471-T-C DYZ19 **
19433259-C-G 17321379-C-G **
19464898-G-T 17353018-G-T **
19464279-C-A 17352399-C-A **
19464278-C-A 17352398-C-A **
19464258-G-C 17352378-G-C **
19464245-T-C 17352365-T-C **
19464107-T-G 17352227-T-G **
19448227-C-A 17336347-C-A **
19433245-T-G 17321365-T-G **
19716317-TA-T 17604437-TA-T P5_Prx **
19429828-G-T 17317948-G-T **
19376287-A-C 17264407-A-C **
19370243-T-C 17258363-T-C **
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18948034-G-C 16836154-G-C **
17860778-G-T 15748898-G-T **
16623580-G-T 14511700-G-T **
21283420-C-A 19121534-C-A **
21934619-C-A 19772733-C-A **
10997808-C-A **
13885684-C-A 11764978-C-A **
8774542-A-G 8906501-A-G **
11647294-C-G **
7397725-C-A 7529684-C-A **
15732159-C-A 13620279-C-A **
8154155-C-A 8286114-C-A **
18263854-C-T 16151974-C-T **
28521639-C-A 26375492-C-A **
28580485-C-T 26434338-C-T **
8774577-G-A 8906536-G-A **
19465732-C-A 17353852-C-A **
10822014-C-A **
10744839-A-C **
5957373-C-A 6089332-C-A **
21263568-C-A 19101682-C-A **
21201160-C-A 19039274-C-A **
56848717-C-A **
19071431-T-G 16959551-T-G **
21092270-C-A 18930384-C-A **
6787046-T-C 6919005-T-C **
5195833-C-T 5327792-C-T **
28800779-TGAATG-T 26654632-TGAATG-T **
10925533-C-G **
8058562-C-G 8190521-C-G **
3606040-T-C 3737999-T-C **
16053443-C-A 13941563-C-A **
17144010-G-A 15032130-G-A **
9426668-C-A 9589059-C-A **
5459264-C-A 5591223-C-A **
14352579-CTT-C 12231874-CTT-C 14×T**
14180700-A-G 12059994-A-G **
14025986-A-G 11905280-A-G **
56870352-G-T **
8058546-T-G 8190505-T-G **
11000522-C-A **
14025988-G-A 11905282-G-A 13×AGAA**
5458678-G-T 5590637-G-T **
18566185-C-A 16454305-C-A **
10898979-A-C **
10781251-C-CTCCAT **
13566074-C-A 11410398-C-A **
7132088-C-A 7264047-C-A **
19753489-T-C 17641609-T-C P5_Prx ***
18480928-C-A 16369048-C-A P6_Dst ***
18534666-G-T 16422786-G-T P6_Dst ***
18579894-T-G 16468014-T-G ***
18579905-G-A 16468025-G-A ***
18876553-C-T 16764673-C-T ***
19668728-T-A 17556848-T-A P5_Prx ***
19081639-A-G 16969759-A-G ***
19018581-G-A 16906701-G-A ***
19668594-G-A 17556714-G-A P5_Prx ***
18478866-C-T 16366986-C-T P6_Dst ***
19668627-G-A 17556747-G-A P5_Prx ***
19604587-G-A 17492707-G-A P5_Prx ***
19583911-G-C 17472031-G-C P5_Prx ***
19425240-C-G 17313360-C-G ***
19552987-G-T 17441107-G-T ***
19668719-T-G 17556839-T-G P5_Prx ***
16210624-T-C 14098744-T-C ***
18478850-G-A 16366970-G-A P6_Dst ***
16974446-C-A 14862566-C-A ***
15098391-C-T 12986479-C-T ***
15148814-A-G 13036901-A-G ***
15628967-A-G 13517087-A-G ***
15835602-A-G 13723722-A-G ***
15837316-A-G 13725436-A-G ***
15839473-C-A 13727593-C-A ***
15889247-G-T 13777367-G-T ***
16161535-T-A 14049655-T-A P8_Dst ***
16726018-G-T 14614138-G-T ***
16814284-C-T 14702404-C-T ***
16998897-T-C 14887017-T-C ***
18361067-C-T 16249187-C-T P6_Prx ***
22308515-A-T 20146629-A-T DYZ19 ***
19517478-C-A 17405598-C-A ***
17123060-T-A 15011180-T-A ***
17268195-G-A 15156315-G-A ***
17567751-T-C 15455871-T-C ***
17784667-A-T 15672787-A-T ***
17835295-G-A 15723415-G-A ***
17932391-A-T 15820511-A-T ***
18231198-A-G 16119318-A-G ***
18306383-T-G 16194503-T-G P6_Prx ***
18330148-A-G 16218268-A-G P6_Prx ***
19753503-T-C 17641623-T-C P5_Prx ***
21012782-C-A 18850896-C-A P4_Dst ***
18911013-C-A 16799133-C-A ***
22297150-T-G 20135264-T-G DYZ19 ***
26529496-G-T 24383349-G-T P1_g2 ***
21474615-A-T 19312729-A-T Z27094 ***
21474617-G-T 19312731-G-T ***
21474618-A-T 19312732-A-T ***
21474619-G-A 19312733-G-A ***
21635119-G-A 19473233-G-A ***
21804734-A-C 19642848-A-C ***
21943230-G-C 19781344-G-C ***
21956204-A-T 19794318-A-T ***
22017320-A-G 19855434-A-G ***
22194982-T-A 20033096-T-A ***
22237254-C-A 20075368-C-A DYZ19 ***
22266043-C-T 20104157-C-T DYZ19 ***
22276440-A-G 20114554-A-G DYZ19 ***
22310868-G-A 20148982-G-A DYZ19 ***
21151961-T-G 18990075-T-G ***
22310893-C-G 20149007-C-G DYZ19 ***
22310921-G-A 20149035-G-A DYZ19 ***
17461825-T-C 15349945-T-C ***
22310985-T-C 20149099-T-C DYZ19 ***
22311015-C-A 20149129-C-A DYZ19 ***
22311673-T-A 20149787-T-A DYZ19 ***
17323542-T-G 15211662-T-G ***
22311681-T-C 20149795-T-C DYZ19 ***
22311682-A-T 20149796-A-T DYZ19 ***
22311701-A-T 20149815-A-T DYZ19 ***
22311703-T-A 20149817-T-A DYZ19 ***
22311707-G-T 20149821-G-T DYZ19 ***
17050116-C-A 14938236-C-A ***
22338585-A-G 20176699-A-G DYZ19 ***
21170910-G-T 19009024-G-T ***
20921571-C-A 18759685-C-A P4_Dst ***
19758356-T-G 17646476-T-G P5_Prx ***
20404413-T-C 18242527-T-C P5_Dst ***
19819600-A-T 17707720-A-T P5_Prx ***
19853600-C-T 17741720-C-T P5_Prx ***
19853707-C-A 17741827-C-A P5_Prx ***
20025280-A-T 17913400-A-T P5_Prx ***
20025412-T-C 17913532-T-C P5_Prx ***
20028277-A-T 17916397-A-T P5_Prx ***
20084556-A-G 17972676-A-G P5_Dst ***
20084559-C-T 17972679-C-T P5_Dst ***
20084831-A-T 17972951-A-T P5_Dst ***
20142089-C-A 18030209-C-A P5_Dst ***
18660831-C-A 16548951-C-A ***
20305422-T-C 18143536-T-C P5_Dst ***
20329809-A-T 18167923-A-T P5_Dst ***
18614350-C-A 16502470-C-A ***
20532908-C-A 18371022-C-A P5_Dst ***
20921560-T-A 18759674-T-A P4_Dst ***
20536893-C-G 18375007-C-G P5_Dst ***
20547953-G-A 18386067-G-A P5_Dst ***
20568134-C-A 18406248-C-A P5_Dst ***
20568217-C-A 18406331-C-A P5_Dst ***
20575067-G-T 18413181-G-T P5_Dst ***
20632564-T-A 18470678-T-A P4_Prx ***
20657689-T-C 18495803-T-C P4_Prx ***
20682919-C-T 18521033-C-T P4_Prx ***
20734362-G-T 18572476-G-T P4_Prx ***
20860086-A-G 18698200-A-G P4_Dst ***
20888035-G-A 18726149-G-A P4_Dst ***
20891397-C-A 18729511-C-A P4_Dst ***
20907390-C-A 18745504-C-A P4_Dst ***
18247123-C-A 16135243-C-A ***
56844169-A-C,G ***
9800303-C-T 9962694-C-T ***
13981324-T-A 11860618-T-A ***
3315618-G-A 3447577-G-A ***
28119963-T-G 25973816-T-G P1_b4 ***
13472029-T-C 11316353-T-C ***
22352436-C-A 20190550-C-A DYZ19 ***
58913614-A-T 56677257-T-A ***
13486718-G-A 11331042-G-A ***
24369420-T-C 22223273-T-C ***
22342311-A-G 20180425-A-G DYZ19 ***
58858086-T-C 56732785-A-G ***
22300925-C-T 20139039-C-T DYZ19 ***
23742162-C-A 21580276-C-A ***
13472031-C-G 11316355-C-G ***
58869412-A-G 56721459-T-C ***
2772505-T-C 2904464-T-C ***
3534560-T-G 3666519-T-G ***
14645425-GTTTTT-G 12533489-GTTTTT-G ***
3634547-A-T 3766506-A-T ***
3974490-T-C 4106449-T-C ***
23425145-T-C 21263259-T-C ***
4099455-G-A 4231414-G-A ***
4223975-A-T 4355934-A-T ***
58854456-G-T 56736415-C-A ***
4290049-G-A 4422008-G-A ***
4622974-A-G 4754933-A-G ***
4623808-A-C 4755767-A-C ***
4914800-G-T 5046759-G-T ***
23197251-C-CT 21035365-C-CT 9×T***
6157218-A-G 6289177-A-G IR3_Dst ***
23033430-ATT-A 20871544-ATT-A ***
20326037-GCA-TCT 18164151-GCA-TCT P5_Dst ***
13724151-ACC-TCG 11568475-ACC-TCG ***
6170864-G-A 6302823-G-A IR3_Dst ***
22300678-C-T 20138792-C-T DYZ19 ***
22504419-A-C 20342533-A-C DYZ19 ***
22308542-T-C 20146656-T-C DYZ19 ***
22268477-C-CAA 20106591-C-CAA DYZ19 ***
24388089-T-TAA 22241942-T-TAA ***
22347141-G-T 20185255-G-T DYZ19 ***
13486792-G-T 11331116-G-T ***
13486806-C-T 11331130-C-T ***
28802809-G-T 26656662-G-T ***
28802814-G-A 26656667-G-A ***
28802829-G-A 26656682-G-A ***
9328944-T-C 9491335-T-C ***
22244094-C-T 20082208-C-T DYZ19 ***
22283895-A-C 20122009-A-C DYZ19 ***
22348412-T-C 20186526-T-C DYZ19 ***
9320547-TAACACACACA-T 9482938-TAACACACACA-T ***
28485256-C-A 26339109-C-A ***
22920607-T-C 20758721-T-C ***
24137422-G-A 21991275-G-A P3_b1 ***
24181081-C-T 22034934-C-T P3_b1 ***
25320057-C-T 23173910-C-T P2_r1 ***
26367045-C-A 24220898-C-A P1_Y1 ***
58862812-T-G 56728059-A-C ***
58904598-A-AT 56686271-C-CA ***
28117196-G-T 25971049-G-T P1_b4 ***
27222196-C-A 25076049-C-A P1_g3 ***
58898724-G-T 56692147-C-A ***
58903327-G-A 56687544-C-T ***
3641037-C-CTTTCT 3772996-C-CTTTCT ***
5569385-G-GAAAA 5701344-G-GAAAA 10×A***
17998520-G-A 15886640-G-A P7_Gap ***
6209707-G-T 6341666-G-T IR3_Dst ***
13746543-T-A 11590867-T-A ***
13516603-G-A 11360927-G-A ***
13131175-T-C 10620661-T-C ***
13201977-A-G 11046301-A-G ***
13306231-T-G 11150555-T-G ***
21862862-C-A 19700976-C-A ***
13381382-G-A 11225706-G-A ***
21802592-C-A 19640706-C-A ***
13471727-G-A 11316051-G-A ***
13472015-G-A 11316339-G-A ***
13486706-A-T 11331030-A-T ***
13486711-C-T 11331035-C-T ***
13486729-C-G 11331053-C-G ***
13486730-A-T 11331054-A-T ***
13486748-G-T 11331072-G-T ***
21566042-C-A 19404156-C-A ***
10013223-C-G 10175614-C-G ***
21561728-C-A 19399842-C-A ***
13561833-C-G 11406157-C-G ***
13611181-C-T 11455505-C-T ***
13611200-A-T 11455524-A-T ***
13611203-G-A 11455527-G-A ***
13611210-T-G 11455534-T-G ***
13611217-T-C 11455541-T-C ***
13611222-C-T 11455546-C-T ***
13724195-C-T 11568519-C-T ***
13724198-G-C 11568522-G-C ***
13724222-G-T 11568546-G-T ***
13724241-T-G 11568565-T-G ***
13724243-C-G 11568567-C-G ***
10034362-A-T 10196753-A-T ***
10013211-C-A 10175602-C-A ***
22934268-A-C 20772382-A-C ***
7076570-G-A 7208529-G-A ***
6246945-G-T 6378904-G-T IR3_Dst ***
6294110-T-G 6426069-T-G IR3_Dst ***
6309440-T-G 6441399-T-G IR3_Dst ***
6394473-G-A 6526432-G-A ***
22802136-C-A 20640250-C-A ***
17998511-C-G 15886631-C-G P7_Gap ***
6566540-T-A 6698499-T-A ***
6568669-G-T 6700628-G-T ***
6819298-T-C 6951257-T-C ***
6819304-C-T 6951263-C-T ***
6819310-C-T 6951269-C-T ***
7076561-C-T 7208520-C-T ***
22509255-G-C 20347369-G-C DYZ19 ***
7299694-A-G 7431653-A-G ***
22251364-A-T 20089478-A-T PF1110 DYZ19 ***
7710278-A-T 7842237-A-T ***
7885815-C-A 8017774-C-A ***
8236504-T-A 8368463-T-A ***
9232404-C-T 9394795-C-T ***
9300642-C-A 9463033-C-A ***
9432813-C-T 9595204-C-T ***
9529129-G-T 9691520-G-T ***
9529130-C-T 9691521-C-T ***
9555514-C-T 9717905-C-T IR3_Prx ***
22173800-A-G 20011914-A-G ***
9625398-T-C 9787789-T-C IR3_Prx ***
22164836-C-A 20002950-C-A ***
9674937-T-C 9837328-T-C IR3_Prx ***
9712825-G-T 9875216-G-T IR3_Prx ***
22481097-A-C 20319211-A-C DYZ19 ***
26352579-G-T 24206432-G-T P1_Y1 ***
16981044-C-A 14869164-C-A ***
6347777-G-GGAAGGAAGGAAGGAAA 6479736-G-GGAAGGAAGGAAGGAAA 9×GAAA***
11000434-A-ATTCCG ***
59033539-T-A 56887392-T-A ***
16692116-CCAA-C 14580236-CCAA-C ***
13329879-A-AAT 11174203-A-AAT 25×AT***
26421932-A-TT 24275785-A-TT P1_Y1 ***
4650472-GAT-G 4782431-GAT-G 24×AT***
3822962-GAT-G 3954921-GAT-G 26×AT***
4826443-T-TAC 4958402-T-TAC ***
5036583-CATATATATATATAT-C 5168542-CATATATATATATAT-C 27×AT***
5253170-CTT-C 5385129-CTT-C 23×T***
5399016-ATTTTT-A 5530975-ATTTTT-A 18×T***
5557237-TCA-T 5689196-TCA-T ***
6226038-TTCTA-T 6357997-TTCTA-T IR3_Dst ***
10962936-T-C ***
6917313-T-TCCTTTCATTGATAGACATTTGGGTTGGTTCCAGG 7049272-T-TCCTTTCATTGATAGACATTTGGGTTGGTTCCAGG ***
58905593-T-A 56685278-A-T ***
10013211-CG-AGC 10175602-CG-AGC ***
10013218-G-GGT 10175609-G-GGT ***
10013223-CAAGAGG-GAA 10175614-CAAGAGG-GAA ***
10013256-AGTTA-GGTT 10175647-AGTTA-GGTT ***
13453618-AATTCCATTCC-A 11297942-AATTCCATTCC-A 12×ATTCC***
13454233-A-ATTCCC 11298557-A-ATTCCC ***
13456020-A-ATTCCC 11300344-A-ATTCCC ***
13456026-T-TTCCAG 11300350-T-TTCCAG ***
13471811-GCTGG-TCTGA 11316135-GCTGG-TCTGA ***
13471842-TGGG-GGGT 11316166-TGGG-GGGT ***
13489488-GCCG-TCCA 11333812-GCCG-TCCA ***
13489698-TGCCCGCA-AGTCCGGG 11334022-TGCCCGCA-AGTCCGGG ***
13616426-GT-AA 11460750-GT-AA ***
13661307-A-AATGGG 11505631-A-AATGGG ***
58908771-T-A 56682100-A-T ***
58902205-T-C 56688666-A-G ***
13746595-GTG-CAC 11590919-GTG-CAC ***
58839106-C-T 56751765-G-A ***
28281330-G-T 26135183-G-T P1_b4 ***
28281521-G-T 26135374-G-T P1_b4 ***
28307754-G-A 26161607-G-A P1_b4 ***
28353047-C-T 26206900-C-T P1_gr2 ***
28442535-C-G 26296388-C-G P1_gr2 ***
28442553-T-A 26296406-T-A P1_gr2 ***
58822981-C-T 56767890-G-A ***
58823694-C-A 56767177-G-T ***
58828238-G-C 56762633-C-G ***
58829306-T-C 56761565-A-G ***
58830146-C-T 56760725-G-A ***
58834584-T-A 56756287-A-T ***
58834682-C-T 56756189-G-A ***
58839091-C-A 56751780-G-T ***
58839933-T-C 56750938-A-G ***
58898226-C-T 56692645-G-A ***
58869002-C-T 56721869-G-A ***
58894991-A-T 56695880-T-A ***
58894944-C-A 56695927-G-T ***
58882945-G-T 56707926-C-A ***
58869798-G-C 56721073-C-G ***
58869311-C-T 56721560-G-A ***
58869044-T-C 56721827-A-G ***
58868943-A-T 56721928-T-A ***
58839936-A-C 56750935-T-G ***
58862765-A-G 56728106-T-C ***
58860826-C-T 56730045-G-A ***
58855684-A-T 56735187-T-A ***
58848449-C-A 56742422-G-T ***
58848412-T-C 56742459-A-G ***
58839938-T-G 56750933-A-C ***
13724195-CTCG-TTCC 11568519-CTCG-TTCC ***
13829452-A-ATGGAC 11708746-A-ATGGAC ***
28232483-A-G 26086336-A-G P1_b4 ***
7655210-TA-T 7787169-TA-T 8×A***
58855076-TC-AT 56735794-GA-AT ***
58856921-CTAA-TTAT 56733947-TTAG-ATAA ***
58898340-GTTA-ATTT 56692528-TAAC-AAAT ***
7460157-A-ATATGTATAATATACATGATGTATAT 7592116-A-ATATGTATAATATACATGATGTATAT IR1_L ***
10004710-A-G 10167101-A-G ***
8468065-CAAAAAAAAAA-C 8600024-CAAAAAAAAAA-C 24×A***
6120234-CATATAT-C 6252193-CATATAT-C 14×AT***
17323549-T-A 15211669-T-A ***
10845717-A-T ***
10885139-C-T ***
15156568-C-A 13044655-C-A ***
2649802-CAAAAA-C 2781761-CAAAAA-C 24×A***
8856970-CT-C 8988929-CT-C ***
7271310-T-C 7403269-T-C ***
10845669-T-TTGGGTTAATTCCATC ***
58823350-T-TA 56767520-G-GT ***
21517951-C-A 19356065-C-A ***
2740491-G-T 2872450-G-T ***
13486727-A-T 11331051-A-T ***
7250385-C-A 7382344-C-A ***
6149745-G-T 6281704-G-T IR3_Dst ***
17295929-C-A 15184049-C-A ***
10885156-C-T ***
23425143-C-G 21263257-C-G ***
7167293-C-A 7299252-C-A ***
5084458-C-A 5216417-C-A ***
14069295-A-AT 11948589-A-AT 9×T***
6128682-C-A 6260641-C-A ***
11666390-A-T ***
7080581-C-A 7212540-C-A ***
9959678-C-A 10122069-C-A ***
58839933-TTCAAT-CTCCAG 56750933-ATTGAA-CTGGAG ***
28534940-CTTTTTT-C 26388793-CTTTTTT-C 18×T***
13829458-T-TGGAAA 11708752-T-TGGAAA ***
20453570-CT-C 18291684-CT-C P5_Dst 12×T***
13845562-A-AATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGG 11724856-A-AATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGG ***
14612253-A-ATAGATAGC 12500459-A-ATAGATAGC ***
14612266-T-TAGATAGAG 12500472-T-TAGATAGAG ***
14612269-A-ATAGC 12500475-A-ATAGC ***
14884697-TGAAAA-T 12772763-TGAAAA-T ***
14937868-C-CTTTTCTTTTT 12825943-C-CTTTTCTTTTT ***
16344428-C-CTCCCTT 14232548-C-CTCCCTT ***
16726757-CCTTCA-GCTTTG 14614877-CCTTCA-GCTTTG ***
17275764-A-AAGGGC 15163884-A-AAGGGC ***
18354182-G-GAAAGAAAA 16242302-G-GAAAGAAAA P6_Prx ***
18354207-A-AAAGAAAGT 16242327-A-AAAGAAAGT P6_Prx ***
18456069-ATT-A 16344189-ATT-A P6_Dst 15×T***
18872077-T-TCCTC 16760197-T-TCCTC ***
19513578-ATTTTTTTTT-A 17401698-ATTTTTTTTT-A 20×T***
21266874-TGT-GGG 19104988-TGT-GGG ***
28478036-T-TAG 26331889-T-TAG ***
10746998-CGT-C ***
10686272-C-A ***
28008591-CA-C 25862444-CA-C P1_Y2 11×A***
10694077-C-A ***
27842242-G-GGAAA 25696095-G-GGAAA P1_Y2 ***
26320733-GTTTATTTGTGTTTCTAATTTATAGTTTAAA-G 24174586-GTTTATTTGTGTTTCTAATTTATAGTTTAAA-G P1_Y1 ***
23100227-AGTG-GGTA 20938341-AGTG-GGTA ***
22446145-GT-G 20284259-GT-G DYZ19 ***
21449351-CA-C 19287465-CA-C 8×A***
22352474-GG-CA 20190588-GG-CA DYZ19 ***
22352465-ACAC-GCAT 20190579-ACAC-GCAT DYZ19 ***
22352436-CGCG-AGCT 20190550-CGCG-AGCT DYZ19 ***
22328421-TA-CG 20166535-TA-CG DYZ19 ***
22319017-CGTCAA-C 20157131-CGTCAA-C DYZ19 ***
22229447-AGTG-GGTA 20067561-AGTG-GGTA DYZ19 ***
28237330-T-A 26091183-T-A P1_b4 ***
28229935-C-T 26083788-C-T P1_b4 ***
22341515-G-C 20179629-G-C DYZ19 ***
24966565-G-T 22820418-G-T g1 ***
24185191-A-C 22039044-A-C P3_b1 ***
24235509-G-A 22089362-G-A P3_b1 ***
24235590-T-A 22089443-T-A P3_b1 ***
24326302-C-A 22180155-C-A P3_t1 ***
24421102-A-T 22274955-A-T ***
24491450-C-T 22345303-C-T ***
24595558-G-A 22449411-G-A P3_t2 ***
24637708-T-G 22491561-T-G P3_t2 ***
15904942-G-T 13793062-G-T ***
24646615-C-T 22500468-C-T P3_b2 ***
24771078-A-T 22624931-A-T P3_b2 ***
24771112-C-T 22624965-C-T P3_b2 ***
24782383-A-T 22636236-A-T P3_b2 ***
24962410-G-T 22816263-G-T g1 ***
24970590-G-A 22824443-G-A g1 ***
16058225-A-G 13946345-A-G ***
25079528-C-A 22933381-C-A g1 ***
25097197-T-C 22951050-T-C g1 ***
25207523-T-A 23061376-T-A P2_r1 ***
25207659-T-A 23061512-T-A P2_r1 ***
25207667-C-A 23061520-C-A P2_r1 ***
25207677-G-A 23061530-G-A P2_r1 ***
25269034-A-C 23122887-A-C P2_r1 ***
25466372-C-A 23320225-C-A P2_r2 ***
25546775-G-T 23400628-G-T P1_gr1 ***
25592405-A-C 23446258-A-C P1_gr1 ***
25699571-G-A 23553424-G-A P1_b3 ***
25709830-A-T 23563683-A-T P1_b3 ***
15281406-C-A 13169505-C-A ***
15281393-C-A 13169492-C-A ***
24173664-T-C 22027517-T-C P3_b1 ***
23728391-A-G 21566505-A-G ***
25791829-C-T 23645682-C-T P1_b3 ***
22434861-C-A 20272975-C-A DYZ19 ***
22341525-T-C 20179639-T-C DYZ19 ***
22347862-G-T 20185976-G-T DYZ19 ***
22352468-C-T 20190582-C-T A4164 DYZ19 ***
22352475-G-A 20190589-G-A DYZ19 ***
22352654-A-C 20190768-A-C DYZ19 ***
22352657-T-G 20190771-T-G DYZ19 ***
22352733-C-T 20190847-C-T DYZ19 ***
22355952-G-A 20194066-G-A DYZ19 ***
22359291-C-A 20197405-C-A DYZ19 ***
22359298-G-A 20197412-G-A DYZ19 ***
22359330-T-A 20197444-T-A DYZ19 ***
22364472-T-G 20202586-T-G DYZ19 ***
22365844-C-A 20203958-C-A DYZ19 ***
22365859-G-C 20203973-G-C DYZ19 ***
22435005-A-T 20273119-A-T DYZ19 ***
23521507-G-A 21359621-G-A ***
23100230-G-A 20938344-G-A ***
23521396-A-T 21359510-A-T ***
23360934-G-A 21199048-G-A ***
23319739-G-C 21157853-G-C ***
23182774-C-T 21020888-C-T ***
23168276-T-G 21006390-T-G ***
23100235-C-T 20938349-C-T ***
23100227-A-G 20938341-A-G ***
22450326-G-C 20288440-G-C DYZ19 ***
23076467-A-T 20914581-A-T ***
22986409-G-A 20824523-G-A ***
22883384-T-A 20721498-T-A ***
22692517-T-A 20530631-T-A ***
22644642-C-A 20482756-C-A ***
22480935-G-A 20319049-G-A DYZ19 ***
25715941-T-C 23569794-T-C P1_b3 ***
25791833-A-T 23645686-A-T P1_b3 ***
28229925-G-A 26083778-G-A P1_b4 ***
27627126-A-G 25480979-A-G P1_Y2 ***
27337879-G-T 25191732-G-T P1_g3 ***
27418029-G-T 25271882-G-T P1_g3 ***
27445939-T-A 25299792-T-A P1_Y2 ***
27454902-A-G 25308755-A-G P1_Y2 ***
27462969-G-T 25316822-G-T P1_Y2 ***
27462988-C-T 25316841-C-T P1_Y2 ***
27466464-T-C 25320317-T-C P1_Y2 ***
27498826-G-A 25352679-G-A P1_Y2 ***
14298218-CAAA-C 12177512-CAAA-C 13×A***
27558099-G-T 25411952-G-T P1_Y2 ***
27585970-A-G 25439823-A-G P1_Y2 ***
27593829-C-A 25447682-C-A P1_Y2 ***
27595337-A-G 25449190-A-G P1_Y2 ***
27595391-G-T 25449244-G-T P1_Y2 9×T***
27627864-T-G 25481717-T-G P1_Y2 ***
27270719-C-A 25124572-C-A P1_g3 ***
27837765-T-C 25691618-T-C P1_Y2 ***
28076466-C-A 25930319-C-A P1_Y2 ***
28061275-T-A 25915128-T-A P1_Y2 ***
28022944-T-A 25876797-T-A P1_Y2 ***
13847188-G-A 11726482-G-A ***
27871886-C-T 25725739-C-T P1_Y2 ***
27861362-G-T 25715215-G-T P1_Y2 ***
27809058-A-C 25662911-A-C P1_Y2 ***
27651665-G-A 25505518-G-A P1_Y2 ***
27733573-C-A 25587426-C-A P1_Y2 ***
27720610-G-A 25574463-G-A P1_Y2 ***
27690920-C-A 25544773-C-A P1_Y2 ***
27651674-G-A 25505527-G-A P1_Y2 ***
27651670-T-A 25505523-T-A P1_Y2 ***
14060233-C-A 11939527-C-A ***
27329099-C-T 25182952-C-T P1_g3 ***
27265898-C-A 25119751-C-A P1_g3 ***
25802627-G-A 23656480-G-A P1_b3 ***
26408492-T-A 24262345-T-A P1_Y1 ***
25841245-G-T 23695098-G-T P1_b3 ***
25912947-C-G 23766800-C-G P1_Y1 ***
25927834-A-C 23781687-A-C P1_Y1 ***
25964935-C-T 23818788-C-T P1_Y1 ***
25981003-T-A 23834856-T-A P1_Y1 ***
26060146-G-A 23913999-G-A P1_Y1 ***
26121612-T-A 23975465-T-A P1_Y1 ***
26124427-C-A 23978280-C-A P1_Y1 31×A***
26147585-A-T 24001438-A-T P1_Y1 ***
26202294-G-T 24056147-G-T P1_Y1 ***
14826066-C-T 12714133-C-T ***
26275572-A-C 24129425-A-C P1_Y1 ***
26335436-T-G 24189289-T-G P1_Y1 ***
26368742-C-T 24222595-C-T P1_Y1 ***
13486724-T-G 11331048-T-G ***
14431991-C-A 12311264-C-A ***
26993060-G-A 24846913-G-A P1_r4 ***
14451967-C-A 12331240-C-A ***
27222112-T-A 25075965-T-A P1_g3 ***
27151337-A-T 25005190-A-T P1_g3 ***
27087049-T-A 24940902-T-A P1_r4 ***
27078243-T-C 24932096-T-C P1_r4 ***
26996339-C-A 24850192-C-A P1_r4 ***
26890372-G-T 24744225-G-T P1_r3 ***
26421809-A-C 24275662-A-C P1_Y1 ***
26810705-C-T 24664558-C-T P1_g2 ***
26672074-C-A 24525927-C-A P1_g2 ***
26554019-G-T 24407872-G-T P1_g2 ***
26534594-T-C 24388447-T-C P1_g2 ***
26461276-C-A 24315129-C-A P1_Y1 ***
26421819-T-C 24275672-T-C P1_Y1 ***
25466278-T-G 23320131-T-G P2_r2 ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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