Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF41/S524 > FGC8622 > FGC8621 > Z17585 > BY3103

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
284562
BigY2
284562
FGC
3JEBL
28817788-C-A 26671641-C-A A*
22276148-T-C 20114262-T-C DYZ19 A*
28817433-C-A 26671286-C-A A*
22243050-G-C 20081164-G-C PF1109 DYZ19 +
14162482-C-T 12041776-C-T FGC40255 Y+
15031167-C-T 12919255-C-T FGC40257 YY++*
14938702-T-G 12826776-T-G FGC40256 YY+++
6436686-T-C 6568645-T-C FGC40251 +
13550399-C-T 11394723-C-T FGC40254 +
5310042-T-C 5442001-T-C FGC40249 **+
6798630-T-C 6930589-T-C **
6767807-A-C 6899766-A-C **
6734745-C-G 6866704-C-G **
6930151-G-A 7062110-G-A Y82903 **
6920796-A-T 7052755-A-T **
6900983-C-A 7032942-C-A **
16060379-A-G 13948499-A-G **
6771769-G-T 6903728-G-T **
6831994-C-A 6963953-C-A **
6886700-C-A 7018659-C-A **
6886695-C-A 7018654-C-A **
6884312-T-G 7016271-T-G **
6931543-T-C 7063502-T-C **
6775240-A-C 6907199-A-C **
6833416-G-T 6965375-G-T **
6930408-C-A 7062367-C-A **
16485922-C-A 14374042-C-A **
6934895-G-T 7066854-G-T **
16048144-C-A 13936264-C-A **
16028573-A-C 13916693-A-C **
16028587-A-C 13916707-A-C **
7102623-C-T 7234582-C-T **
7039277-G-A 7171236-G-A **
7035297-C-A 7167256-C-A **
7009272-C-T 7141231-C-T **
7008882-T-G 7140841-T-G **
7004000-A-G 7135959-A-G **
6935339-A-T 7067298-A-T **
16050484-C-G 13938604-C-G **
6977047-C-T 7109006-C-T **
6977042-C-A 7109001-C-A **
6957109-T-G 7089068-T-G **
6954895-G-T 7086854-G-T **
16058946-C-G 13947066-C-G **
6674618-C-A 6806577-C-A **
6729672-A-C 6861631-A-C **
6487567-G-T 6619526-G-T **
6664062-A-G 6796021-A-G Y82277 **
5799930-G-T 5931889-G-T **
5927416-G-T 6059375-G-T **
5905472-A-C 6037431-A-C **
5864769-A-C 5996728-A-C **
5851330-T-G 5983289-T-G **
5838193-A-C 5970152-A-C **
5836154-T-G 5968113-T-G **
5743257-C-G 5875216-C-G **
5988717-G-A 6120676-G-A **
5743147-C-G 5875106-C-G **
5703206-T-G 5835165-T-G **
5687638-G-T 5819597-G-T **
5609698-G-C 5741657-G-C **
5580873-G-T 5712832-G-T **
5535382-A-C 5667341-A-C **
5524073-G-T 5656032-G-T **
5957042-G-T 6089001-G-T **
5988726-C-A 6120685-C-A **
6663373-C-A 6795332-C-A **
6191624-T-C 6323583-T-C IR3_Dst **
6663319-C-A 6795278-C-A **
6643346-T-G 6775305-T-G **
7126605-A-T 7258564-A-T **
6355117-C-A 6487076-C-A **
16253989-A-G 14142109-A-G **
6319960-G-A 6451919-G-A IR3_Dst **
6319934-C-A 6451893-C-A IR3_Dst **
6179475-G-C 6311434-G-C IR3_Dst **
5999513-C-A 6131472-C-A **
6126078-G-T 6258037-G-T **
6120325-G-T 6252284-G-T **
6100497-C-A 6232456-C-A **
6100398-G-T 6232357-G-T **
6092431-G-T 6224390-G-T **
6090280-C-T 6222239-C-T **
6037875-A-C 6169834-A-C **
16018853-C-A 13906973-C-A **
7142616-G-T 7274575-G-T **
7126641-C-A 7258600-C-A **
7654301-C-A 7786260-C-A **
15915038-G-T 13803158-G-T **
7733523-C-A 7865482-C-A **
7723564-C-A 7855523-C-A **
7721355-C-A 7853314-C-A **
7699831-T-C 7831790-T-C **
7697300-C-A 7829259-C-A **
15916134-C-A 13804254-C-A **
15921121-G-T 13809241-G-T **
7864164-C-A 7996123-C-A **
7643568-G-T 7775527-G-T **
7621148-G-T 7753107-G-T **
7580746-A-G 7712705-A-G **
7580141-T-G 7712100-T-G **
7580122-G-T 7712081-G-T **
7564358-G-T 7696317-G-T **
7558022-A-C 7689981-A-C **
7753093-C-A 7885052-C-A **
7918597-T-G 8050556-T-G **
7430738-G-T 7562697-G-T **
8140366-A-G 8272325-A-G **
8216436-G-A 8348395-G-A **
8216431-G-A 8348390-G-A **
8214051-G-C 8346010-G-C **
8184740-C-A 8316699-C-A **
8172843-A-T 8304802-A-T **
8159605-T-G 8291564-T-G **
8146147-T-C 8278106-T-C **
8090930-C-A 8222889-C-A **
7918607-T-G 8050566-T-G **
8085265-A-C 8217224-A-C **
7995932-A-C 8127891-A-C **
7995917-A-C 8127876-A-C **
7991427-G-T 8123386-G-T **
7986163-A-C 8118122-A-C **
15874147-A-C 13762267-A-C **
7958423-A-C 8090382-A-C **
7450375-A-C 7582334-A-C IR1_L **
7430730-G-T 7562689-G-T **
7138235-T-C 7270194-T-C **
7191742-T-G 7323701-T-G **
7240900-TC-T 7372859-TC-T **
16017848-A-G 13905968-A-G **
7237113-C-A 7369072-C-A **
7234885-C-A 7366844-C-A **
7226943-C-G 7358902-C-G **
7222924-A-C 7354883-A-C **
7214274-C-A 7346233-C-A **
7187714-C-T 7319673-C-T **
7248078-C-A 7380037-C-A **
7183056-G-C 7315015-G-C **
7176887-C-A 7308846-C-A **
7164177-C-A 7296136-C-A **
7158018-G-T 7289977-G-T **
7148088-C-A 7280047-C-A **
7144041-C-T 7276000-C-T **
5494683-C-G 5626642-C-G **
7246146-G-T 7378105-G-T **
7250527-T-G 7382486-T-G **
7413475-A-G 7545434-A-G **
7359765-TAAAATATA-T 7491724-TAAAATATA-T **
7401163-A-T 7533122-A-T **
15922055-A-G 13810175-A-G **
7386714-A-C 7518673-A-C **
7368849-C-A 7500808-C-A **
7368807-A-C 7500766-A-C **
7368781-C-A 7500740-C-A **
7360825-G-T 7492784-G-T **
7359743-A-T 7491702-A-T 11×AT**
7258709-C-A 7390668-C-A **
15922466-C-A 13810586-C-A **
7329344-A-T 7461303-A-T **
7323086-T-G 7455045-T-G **
7323058-C-G 7455017-C-G **
7323046-G-T 7455005-G-T **
15939984-C-A 13828104-C-A **
7315329-A-G 7447288-A-G **
7311633-C-A 7443592-C-A **
5494685-G-T 5626644-G-T **
5412386-G-C 5544345-G-C **
5490071-C-A 5622030-C-A **
2668995-G-T 2800954-G-T **
2785954-T-C 2917913-T-C **
2778628-G-T 2910587-G-T **
2762149-G-T 2894108-G-T **
2746684-G-C 2878643-G-C **
2708762-T-C 2840721-T-C **
2706713-G-T 2838672-G-T **
2681184-G-T 2813143-G-T **
2668880-T-A 2800839-T-A **
16340935-A-C 14229055-A-C **
16342166-T-C 14230286-T-C **
16933232-G-T 14821352-G-T **
16964-A-G **
2651251-C-A 2783210-C-A **
17137121-C-A 15025241-C-A **
7640903-C-A 7772862-C-A **
15952833-A-G 13840953-A-G **
2803882-G-A 2935841-G-A **
16312416-G-T 14200536-G-T **
6226728-G-T 6358687-G-T IR3_Dst **
3112423-C-A 3244382-C-A **
3446735-C-A 3578694-C-A **
3440343-C-A 3572302-C-A **
3422345-T-G 3554304-T-G **
3341507-A-C 3473466-A-C **
3250807-T-G 3382766-T-G **
3151721-A-G 3283680-A-G **
3131710-A-C 3263669-A-C **
3093783-A-C 3225742-A-C **
2847134-C-A 2979093-C-A **
3079485-G-C 3211444-G-C **
3073860-G-T 3205819-G-T **
3016629-G-T 3148588-G-T **
3012962-T-C 3144921-T-C **
2970369-G-A 3102328-G-A **
2948775-A-C 3080734-A-C **
2928395-T-A 3060354-T-A **
16233407-C-A 14121527-C-A **
10926800-C-A **
3491552-G-T 3623511-G-T **
21346245-C-A 19184359-C-A **
14006660-C-A 11885954-C-A **
28510303-C-A 26364156-C-A **
6818929-C-A 6950888-C-A **
3252927-C-A 3384886-C-A **
19399845-C-A 17287965-C-A **
23332182-C-A 21170296-C-A **
14529064-C-A 12417265-C-A **
19449089-C-A 17337209-C-A **
8981595-G-T 9143986-G-T **
19217190-C-A 17105310-C-A **
4872027-C-A 5003986-C-A **
9865271-C-A 10027662-C-A **
2785173-C-A 2917132-C-A **
10050767-C-A 10213158-C-A **
16640399-C-A 14528519-C-A **
16441032-C-A 14329152-C-A **
21455457-C-A 19293571-C-A **
22836486-C-A 20674600-C-A **
16877040-T-G 14765160-T-G **
56834547-C-G **
18098867-C-A 15986987-C-A **
13614058-C-A 11458382-C-A **
19563180-C-A 17451300-C-A **
16382773-A-C 14270893-A-C **
24424235-C-A 22278088-C-A **
3046452-C-A 3178411-C-A **
16392253-G-C 14280373-G-C **
14586058-C-A 12474258-C-A **
9398086-A-C 9560477-A-C **
22920630-TG-T 20758744-TG-T **
16419004-C-A 14307124-C-A **
28779165-G-T 26633018-G-T **
14701373-T-G 12589439-T-G **
18145607-C-A 16033727-C-A **
26563901-A-C 24417754-A-C P1_g2 **
26478218-C-A 24332071-C-A P1_Y1 **
3479811-C-A 3611770-C-A **
3559756-T-G 3691715-T-G **
5483707-T-C 5615666-T-C **
4795621-C-A 4927580-C-A **
4902419-T-G 5034378-T-G **
4900729-G-T 5032688-G-T **
4898068-A-G 5030027-A-G **
4874840-T-G 5006799-T-G **
4874784-G-T 5006743-G-T **
4872404-A-G 5004363-A-G **
4863334-C-A 4995293-C-A **
4786196-T-G 4918155-T-G **
4956223-G-T 5088182-G-T **
4769585-C-A 4901544-C-A **
4665830-A-C 4797789-A-C **
4651141-G-T 4783100-G-T **
4616528-T-G 4748487-T-G **
4567015-T-G 4698974-T-G **
4557743-A-C 4689702-A-C **
4553354-C-A 4685313-C-A **
4918946-T-G 5050905-T-G **
4959980-C-A 5091939-C-A **
4533526-G-T 4665485-G-T **
5324807-G-T 5456766-G-T **
5483581-C-A 5615540-C-A **
8269963-T-G 8401922-T-G **
5408335-G-T 5540294-G-T **
5407601-A-C 5539560-A-C **
5407554-A-C 5539513-A-C **
5367850-A-G 5499809-A-G **
5345512-CT-C 5477471-CT-C **
5247257-T-C 5379216-T-C **
4999877-T-G 5131836-T-G **
5205230-T-C 5337189-T-C **
5116480-A-C 5248439-A-C **
5087163-A-G 5219122-A-G **
5087142-T-G 5219101-T-G **
5069614-T-G 5201573-T-G **
5042498-C-A 5174457-C-A **
5042489-T-A 5174448-T-A **
4549522-C-A 4681481-C-A **
4521896-C-T 4653855-C-T **
3599550-A-C 3731509-A-C **
3851722-TAG-T 3983681-TAG-T **
3991190-G-T 4123149-G-T **
3991168-T-G 4123127-T-G **
3991128-G-A 4123087-G-A **
3959783-G-T 4091742-G-T **
3875857-G-T 4007816-G-T **
3871628-G-T 4003587-G-T **
3871512-A-G 4003471-A-G **
3849007-C-A 3980966-C-A **
4070003-C-A 4201962-C-A **
3712126-C-G 3844085-C-G **
3705078-A-C 3837037-A-C **
3696725-A-G 3828684-A-G **
3627933-G-C 3759892-G-C **
3627928-G-T 3759887-G-T **
3622591-T-G 3754550-T-G **
3606349-C-A 3738308-C-A **
3991195-G-T 4123154-G-T **
4070043-A-C 4202002-A-C **
4521857-A-C 4653816-A-C **
4262408-C-A 4394367-C-A **
4479362-C-A 4611321-C-A **
4460169-T-G 4592128-T-G **
4374420-G-T 4506379-G-T **
4374373-T-G 4506332-T-G **
4351597-T-C 4483556-T-C **
4293476-C-A 4425435-C-A **
4269626-C-A 4401585-C-A **
4257743-C-A 4389702-C-A **
4103739-A-C 4235698-A-C **
4242956-T-G 4374915-T-G **
4241570-G-A 4373529-G-A **
4212515-T-G 4344474-T-G **
4161513-T-G 4293472-T-G **
4136639-A-G 4268598-A-G **
4119347-G-T 4251306-G-T **
4103756-T-C 4235715-T-C **
8269941-A-T 8401900-A-T **
8673864-C-A 8805823-C-A **
8291051-A-G 8423010-A-G **
15468664-T-G 13356784-T-G **
14296814-C-A 12176108-C-A **
14252271-G-T 12131565-G-T **
14245053-T-C 12124347-T-C **
14228980-G-A 12108274-G-A **
14226464-C-A 12105758-C-A **
15405219-C-A 13293339-C-A **
14195892-A-C 12075186-A-C **
14296868-A-C 12176162-A-C **
14194848-T-G 12074142-T-G **
14180650-G-T 12059944-G-T **
14177884-A-C 12057178-A-C **
14175598-T-G 12054892-T-G **
14175591-C-G 12054885-C-G **
14168246-C-A 12047540-C-A **
14160225-G-T 12039519-G-T **
14296862-A-C 12176156-A-C **
14316319-G-T 12195613-G-T **
14124159-G-T 12003453-G-T **
14379378-G-T 12258674-G-T **
14440064-C-A 12319337-C-A **
14420087-A-C 12299362-A-C **
14405108-G-T 12284405-G-T **
14405100-G-T 12284397-G-T **
15403500-G-T 13291620-G-T **
14384673-G-T 12263969-G-T **
14384333-G-T 12263629-G-T **
14379373-T-G 12258669-T-G **
14326549-T-G 12205843-T-G **
14379330-G-T 12258626-G-T **
14373659-A-C 12252955-A-C **
14372151-G-T 12251447-G-T **
14369179-T-G 12248475-T-G **
14349316-G-T 12228611-G-T **
14328076-C-A 12207370-C-A **
14328072-C-A 12207366-C-A **
14149432-AG-A 12028726-AG-A **
14105322-A-C 11984616-A-C **
15397870-T-G 13285990-T-G **
13821529-G-T 11700823-G-T **
13935694-C-G 11814988-C-G **
13934367-G-T 11813661-G-T **
13928327-G-T 11807621-G-T **
13909783-C-A 11789077-C-A **
13898706-G-T 11778000-G-T **
13855332-G-T 11734626-G-T **
13855317-G-T 11734611-G-T **
13821465-A-G 11700759-A-G **
13952711-G-T 11832005-G-T **
13817457-C-A 11696751-C-A **
13817455-A-C 11696749-A-C **
13817451-T-C 11696745-T-C **
13804255-G-T 11683549-G-T **
13804221-G-T 11683515-G-T **
13803314-A-C 11682608-A-C **
11676860-T-A **
13941286-C-A 11820580-C-A **
13960907-G-T 11840201-G-T **
15475374-C-A 13363494-C-A **
15527733-C-A 13415853-C-A **
15503495-A-G 13391615-A-G **
14091368-C-A 11970662-C-A **
14076230-C-A 11955524-C-A **
14071400-C-G 11950694-C-G **
14054868-C-A 11934162-C-A **
14046527-C-A 11925821-C-A **
14038014-C-A 11917308-C-A **
14007381-A-G 11886675-A-G **
13960919-G-T 11840213-G-T **
13996696-G-T 11875990-G-T **
13996685-T-G 11875979-T-G **
13996670-G-T 11875964-G-T **
13974135-T-G 11853429-T-G **
13974069-G-T 11853363-G-T **
13973339-G-T 11852633-G-T **
13960924-C-A 11840218-C-A **
15402830-G-T 13290950-G-T **
14451035-C-G 12330308-C-G **
11656638-A-G **
14764976-A-G 12653045-A-G **
14881834-C-A 12769902-C-A **
15318091-C-A 13206197-C-A **
14871391-T-C 12759461-T-C **
14802685-A-C 12690756-A-C **
14789297-C-A 12677368-C-A **
14785497-C-T 12673567-C-T **
14765309-G-T 12653378-G-T **
14761275-A-C 12649344-A-C **
14894112-T-G 12782178-T-G **
15335903-C-T 13224021-C-T **
14757715-T-G 12645784-T-G **
15381182-G-T 13269302-G-T **
14748061-C-T 12636130-C-T **
14748041-C-A 12636110-C-A **
14741869-T-G 12629937-T-G **
14741864-G-T 12629932-G-T **
14884566-G-T 12772632-G-T **
14894118-G-T 12782184-G-T **
14694733-C-T 12582799-C-T **
15168826-C-A 13056912-C-A **
15250745-G-T 13138831-G-T **
15284322-G-T 13172421-G-T **
15229500-A-C 13117586-A-C **
15208106-C-T 13096192-C-T **
15297435-T-G 13185534-T-G **
15172745-T-G 13060831-T-G **
15172023-C-A 13060109-C-A **
15137971-A-C 13026058-A-C **
14980977-C-A 12869053-C-A **
15109814-T-G 12997901-T-G **
15106978-G-C 12995065-G-C **
15104971-T-G 12993059-T-G **
15104880-C-G 12992968-C-G **
15103748-C-A 12991836-C-A **
15065943-A-C 12954035-A-C **
15061755-G-T 12949847-G-T **
14701361-G-T 12589427-G-T **
14681426-C-A 12569492-C-A **
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22263684-T-A 20101798-T-A DYZ19 ***
22290145-C-T 20128259-C-T DYZ19 ***
22292682-G-A 20130796-G-A DYZ19 ***
22292692-T-C 20130806-T-C DYZ19 ***
22292694-A-T 20130808-A-T DYZ19 ***
22292695-G-A 20130809-G-A DYZ19 ***
22306002-T-G 20144116-T-G DYZ19 ***
22341432-G-T 20179546-G-T DYZ19 ***
22341448-T-G 20179562-T-G DYZ19 ***
22431581-A-T 20269695-A-T DYZ19 ***
22242737-T-G 20080851-T-G DYZ19 ***
22435026-T-C 20273140-T-C DYZ19 ***
22479500-A-G 20317614-A-G DYZ19 ***
22481516-T-A 20319630-T-A DYZ19 ***
22504027-A-T 20342141-A-T DYZ19 ***
22624358-C-G 20462472-C-G ***
22668557-G-A 20506671-G-A ***
23017993-T-G 20856107-T-G ***
23093631-T-A 20931745-T-A ***
23192980-T-G 21031094-T-G ***
23513868-A-T 21351982-A-T ***
23521401-T-A 21359515-T-A ***
23521411-A-G 21359525-A-G ***
23521437-A-G 21359551-A-G ***
24076987-C-T 21930840-C-T P3_b1 ***
22242769-A-G 20080883-A-G DYZ19 ***
22242725-G-C 20080839-G-C DYZ19 ***
19847274-A-C 17735394-A-C P5_Prx ***
20534372-T-A 18372486-T-A P5_Dst ***
19927046-C-T 17815166-C-T P5_Prx ***
20025310-A-G 17913430-A-G P5_Prx ***
20084593-A-C 17972713-A-C P5_Dst ***
20084687-A-T 17972807-A-T P5_Dst ***
20084966-A-T 17973086-A-T P5_Dst ***
20252302-G-T 18090416-G-T P5_Dst ***
20306813-A-C 18144927-A-C P5_Dst ***
20331830-C-A 18169944-C-A P5_Dst ***
20333999-A-T 18172113-A-T P5_Dst ***
20362846-C-T 18200960-C-T P5_Dst ***
20420442-G-A 18258556-G-A P5_Dst ***
20426278-T-A 18264392-T-A P5_Dst ***
20433004-T-G 18271118-T-G P5_Dst ***
20511016-C-T 18349130-C-T P5_Dst ***
20681227-G-A 18519341-G-A P4_Prx ***
22242721-A-T 20080835-A-T DYZ19 ***
20734575-G-A 18572689-G-A P4_Prx ***
20735758-A-T 18573872-A-T P4_Prx ***
20948735-C-A 18786849-C-A P4_Dst ***
20968786-G-A 18806900-G-A P4_Dst ***
21057373-G-T 18895487-G-T ***
21060410-G-A 18898524-G-A ***
21060413-A-G 18898527-A-G ***
21060417-G-T 18898531-G-T ***
21085780-A-C 18923894-A-C ***
21171858-G-A 19009972-G-A ***
21997344-A-G 19835458-A-G ***
22226539-T-G 20064653-T-G DYZ19 ***
22235081-C-T 20073195-C-T DYZ19 ***
22242719-G-T 20080833-G-T DYZ19 ***
13341531-G-A 11185855-G-A ***
13253214-C-T 11097538-C-T ***
24082002-T-A 21935855-T-A P3_b1 ***
5569385-G-GAAAA 5701344-G-GAAAA 10×A***
9946785-T-C 10109176-T-C ***
13326150-TTTC-T 11170474-TTTC-T ***
17267277-T-G 15155397-T-G CTS7066 ***
18176647-CAT-C 16064767-CAT-C ***
58858865-CCCATTCCATT-C 56731955-CAATGGAATGG-C 10×CCATT***
4822153-G-T 4954112-G-T ***
22290137-G-A 20128251-G-A DYZ19 ***
22355477-G-T 20193591-G-T DYZ19 ***
8333480-TTTCTTCTTCTTC-T 8465439-TTTCTTCTTCTTC-T 31×TTC***
22235090-C-A 20073204-C-A DYZ19 ***
13351239-A-G 11195563-A-G ***
13486190-A-T 11330514-A-T ***
16814194-A-C 14702314-A-C ***
9320547-TAACACACACA-T 9482938-TAACACACACA-T ***
9946766-G-C 10109157-G-C ***
22321030-A-T 20159144-A-T DYZ19 ***
17523369-C-T 15411489-C-T ***
58860497-C-A 56730374-G-T FGC42760 ***
13535639-GTATA-G 11379963-GTATA-G 21×TA***
22345994-G-GTC 20184108-G-GTC DYZ19 ***
24388084-A-ATC 22241937-A-ATC ***
22293376-T-C 20131490-T-C DYZ19 ***
22242773-G-A 20080887-G-A F7613 DYZ19 ***
13456020-A-ATTCCC 11300344-A-ATTCCC ***
24425336-C-CATGT 22279189-C-CATGT ***
28117183-A-T 25971036-A-T P1_b4 ***
28117221-G-T 25971074-G-T P1_b4 ***
25207776-T-A 23061629-T-A P2_r1 ***
9946831-C-T 10109222-C-T ***
9946769-T-C 10109160-T-C ***
4826402-A-T 4958361-A-T ***
9946738-A-T 10109129-A-T ***
22261357-G-T 20099471-G-T DYZ19 ***
13667353-G-A 11511677-G-A ***
13717312-AATGGG-A 11561636-AATGGG-A ***
13804746-GGAATT-G 11684040-GGAATT-G ***
13817995-A-C 11697289-A-C ***
13833167-G-A 11712461-G-A ***
13837330-C-A 11716624-C-A ***
13837332-C-G 11716626-C-G ***
13861555-A-G 11740849-A-G ***
13861573-A-G 11740867-A-G ***
13864507-AATTAAATGGACTCGC-A 11743801-AATTAAATGGACTCGC-A ***
13867097-A-T 11746391-A-T ***
22242450-T-A 20080564-T-A DYZ19 ***
22258731-G-T 20096845-G-T DYZ19 ***
22299808-T-G 20137922-T-G DYZ19 ***
22292719-G-A 20130833-G-A DYZ19 ***
22366085-C-G 20204199-C-G DYZ19 ***
22479298-T-G 20317412-T-G DYZ19 ***
24036638-ATACC-A 21890491-ATACC-A ***
24952837-TAA-T 22806690-TAA-T g1 19×A***
26834853-AAAGGAAGGAAGGAAGG-A 24688706-AAAGGAAGGAAGGAAGG-A P1_g2 11×AAGG***
27009178-G-GT 24863031-G-GT P1_r4 8×T***
27791986-T-TCTG 25645839-T-TCTG P1_Y2 ***
58972626-T-A 56826479-T-A ***
58972631-T-A 56826484-T-A ***
58972635-G-C 56826488-G-C ***
22268478-A-ACG 20106592-A-ACG DYZ19 ***
58872275-C-G 56718596-G-C ***
58887847-A-C 56703024-T-G ***
13486004-A-AC 11330328-A-AC ***
9946706-G-T 10109097-G-T ***
9946814-A-G 10109205-A-G ***
13201904-A-C 11046228-A-C ***
9410584-G-T 9572975-G-T ***
6246390-G-A 6378349-G-A IR3_Dst ***
6249912-G-T 6381871-G-T IR3_Dst ***
6550602-A-C 6682561-A-C ***
6622924-A-G 6754883-A-G ***
7002463-C-T 7134422-C-T ***
7003202-G-T 7135161-G-T ***
7150495-A-G 7282454-A-G ***
7495831-C-A 7627790-C-A IR1_L ***
8085548-C-T 8217507-C-T ***
9181628-T-C 9344019-T-C ***
9194420-A-G 9356811-A-G ***
9239318-C-A 9401709-C-A ***
9327762-T-A 9490153-T-A ***
9527833-C-A 9690224-C-A ***
6233066-C-A 6365025-C-A IR3_Dst ***
9534141-C-A 9696532-C-A IR3_Prx ***
9577694-C-A 9740085-C-A IR3_Prx ***
9620209-A-G 9782600-A-G IR3_Prx ***
9651456-G-A 9813847-G-A IR3_Prx ***
9677995-T-C 9840386-T-C IR3_Prx ***
9706168-C-T 9868559-C-T IR3_Prx ***
9716248-T-C 9878639-T-C IR3_Prx ***
9716302-C-T 9878693-C-T IR3_Prx ***
9910807-C-G 10073198-C-G ***
9910826-T-A 10073217-T-A ***
9912729-T-G 10075120-T-G ***
10033655-C-A 10196046-C-A ***
13107832-T-A 10597318-T-A ***
13114117-C-A 10603603-C-A ***
6241771-C-A 6373730-C-A IR3_Dst ***
6105949-A-C 6237908-A-C ***
9946766-GAGT-CAGC 10109157-GAGT-CAGC ***
2898261-G-A 3030220-G-A ***
22342092-A-C 20180206-A-C DYZ19 ***
22355626-A-T 20193740-A-T DYZ19 ***
22355682-C-A 20193796-C-A DYZ19 ***
22355710-A-G 20193824-A-G DYZ19 ***
22355716-T-G 20193830-T-G DYZ19 ***
13351230-T-A 11195554-T-A ***
22292696-T-C 20130810-T-C DYZ19 ***
22292702-G-A 20130816-G-A DYZ19 ***
22292730-C-T 20130844-C-T DYZ19 ***
22292738-G-C 20130852-G-C DYZ19 ***
58828247-C-T 56762624-G-A ***
58914919-C-A 56675952-G-T ***
19438259-T-G 17326379-T-G ***
22287097-G-T 20125211-G-T DYZ19 ***
3663094-C-A 3795053-C-A ***
5400895-A-T 5532854-A-T ***
3716191-A-G 3848150-A-G ***
4431433-A-T 4563392-A-T ***
4431916-G-T 4563875-G-T ***
4471049-C-T 4603008-C-T ***
4471066-G-A 4603025-G-A ***
4471076-G-A 4603035-G-A ***
4471077-C-G 4603036-C-G ***
4471083-C-T 4603042-C-T ***
5009638-A-T 5141597-A-T ***
5117312-A-G 5249271-A-G ***
5196796-A-G 5328755-A-G ***
5270723-A-G 5402682-A-G ***
5270726-C-T 5402685-C-T ***
5378192-C-A 5510151-C-A 21×A***
24081945-T-A 21935798-T-A P3_b1 ***
24118699-C-T 21972552-C-T P3_b1 ***
15194847-C-A 13082933-C-A ***
25505124-CTTTTTTTTTTTTTTTTT-C 23358977-CTTTTTTTTTTTTTTTTT-C P1_gr1 39×T***
22244043-AA-TT 20082157-AA-TT DYZ19 ***
22248409-GG-C 20086523-GG-C DYZ19 ***
22287095-GTG-TTT 20125209-GTG-TTT DYZ19 ***
22292692-TTAGT-CTTAC 20130806-TTAGT-CTTAC DYZ19 ***
22341429-CTGG-GTGT 20179543-CTGG-GTGT DYZ19 ***
22440307-A-AGG 20278421-A-AGG DYZ19 ***
22479210-GTTT-ATTA 20317324-GTTT-ATTA DYZ19 ***
22479241-TCCT-CCCG 20317355-TCCT-CCCG DYZ19 ***
23336316-AT-A 21174430-AT-A ***
23438879-CTTTT-C 21276993-CTTTT-C 21×T***
23521409-TTA-CTG 21359523-TTA-CTG ***
24388082-A-ATC 22241935-A-ATC ***
24646583-G-GTT 22500436-G-GTT P3_b2 21×T***
25749573-TT-A 23603426-TT-A P1_b3 ***
22242742-TG-GT 20080856-TG-GT DYZ19 ***
25749572-GT-G 23603425-GT-G P1_b3 ***
26170527-GGAA-G 24024380-GGAA-G P1_Y1 23×GAA***
26478140-G-GAAAT 24331993-G-GAAAT P1_Y1 ***
26534603-C-CT 24388456-C-CT P1_g2 14×T***
27127533-CCTTCCTTCCTTT-C 24981386-CCTTCCTTCCTTT-C P1_g3 ***
58854620-A-ATTCAT 56736249-T-TAATGA ***
58912879-AT-TG 56677991-AT-CA ***
2865088-C-A 2997047-C-A ***
56831957-A-T ***
22518753-TAAA-T 20356867-TAAA-T 14×A***
7674342-C-A 7806301-C-A ***
24475140-G-T 22328993-G-T ***
10682573-A-C ***
10012989-C-A 10175380-C-A ***
22242769-AAAGG-GAAGA 20080883-AAAGG-GAAGA DYZ19 ***
22242719-GGACTGG-TGTCTGC 20080833-GGACTGG-TGTCTGC DYZ19 ***
11643721-AT-A ***
13829435-G-GAATGT 11708729-G-GAATGT ***
13258558-CTTTT-C 11102882-CTTTT-C 20×T***
13456022-T-TCCATG 11300346-T-TCCATG ***
13456025-A-ATTCCC 11300349-A-ATTCCC ***
13459228-TTCTATTCCAT-CTCTGTTCTAC 11303552-TTCTATTCCAT-CTCTGTTCTAC ***
13469948-CTTCAG-AGTCAT 11314272-CTTCAG-AGTCAT ***
13486006-AGT-A 11330330-AGT-A ***
13488961-CCA-GCT 11333285-CCA-GCT ***
13488968-CGGCC-TGGCG 11333292-CGGCC-TGGCG ***
13489074-GCTTCAG-ACTCCAT 11333398-GCTTCAG-ACTCCAT ***
13489132-CTGGC-ACGGT 11333456-CTGGC-ACGGT ***
13711744-GAATGGAACGGAATGGAATTAAATGGAACGGAATGGAATGGCATGGAATGGAATGGCATGGCATGGAATGGAATGGAATGGAATGGAATGA-G 11556068-GAATGGAACGGAATGGAATTAAATGGAACGGAATGGAATGGCATGGAATGGAATGGCATGGCATGGAATGGAATGGAATGGAATGGAATGA-G ***
13733865-ACGAGCGCAA-TGGAGCGCAT 11578189-ACGAGCGCAA-TGGAGCGCAT ***
13737641-CAAAAT-TTAAAA 11581965-CAAAAT-TTAAAA ***
13829443-T-TGGAAA 11708737-T-TGGAAA ***
22242710-CACCG-TACCT 20080824-CACCG-TACCT DYZ19 ***
13923530-CAAAAAAAAAAAAAAA-C 11802824-CAAAAAAAAAAAAAAA-C 29×A***
14161138-ACTGG-GCTGA 12040432-ACTGG-GCTGA ***
14937871-T-TTCTTTTCTTG 12825946-T-TTCTTTTCTTG ***
14937873-C-CTTTTCTTTTT 12825948-C-CTTTTCTTTTT ***
15151501-TCA-T 13039588-TCA-T ***
15874319-CAAAA-C 13762439-CAAAA-C 15×A***
16013062-G-GGTTTTTTT 13901182-G-GGTTTTTTT 8×T***
17527348-ATATATGTATATATATATATATATATATGTG-A 15415468-ATATATGTATATATATATATATATATATGTG-A ***
17951305-T-TTA 15839425-T-TTA ******
18454893-C-CTTTT 16343013-C-CTTTT P6_Dst ***
19015224-CAAA-TAAG 16903344-CAAA-TAAG ***
19048928-TAAAAAA-T 16937048-TAAAAAA-T 18×A***
20426330-TGAC-GGAA 18264444-TGAC-GGAA P5_Dst ***
21464536-CAAAAAA-C 19302650-CAAAAAA-C 19×A***
10625044-T-G ***
13448886-CTCCACTCCAG-C,CTCCACTCCAC 11293210-CTCCACTCCAG-C,CTCCACTCCAC ***
6226088-T-TTTCG 6358047-T-TTTCG IR3_Dst ***
14027041-T-C 11906335-T-C ***
10744559-C-A ***
10748364-T-A ***
10968484-T-G ***
13226038-T-C 11070362-T-C ***
13228566-C-A 11072890-C-A ***
13448839-C-T 11293163-C-T ***
13458756-C-A 11303080-C-A ***
13465301-CA-C 11309625-CA-C ***
13486192-T-A 11330516-T-A ***
13601071-T-A 11445395-T-A ***
13620414-C-A 11464738-C-A ***
11656031-A-T ***
14021051-C-A 11900345-C-A ***
14099633-C-A 11978927-C-A ***
10022703-C-A 10185094-C-A ***
14103027-G-T 11982321-G-T ***
14198774-C-A 12078068-C-A ***
14203245-T-A 12082539-T-A ***
14393312-C-A 12272608-C-A ***
14442110-T-C 12321383-T-C ***
14448486-G-A 12327759-G-A ***
14557891-C-A 12446092-C-A ***
14560868-G-T 12449069-G-T ***
14582571-C-T 12470771-C-T ***
14607795-G-T 12495997-G-T ***
14751738-C-A 12639807-C-A ***
14761223-C-A 12649292-C-A ***
14879098-G-T 12767168-G-T ***
15140782-C-A 13028869-C-A ***
10682513-A-G ***
9706655-C-A 9869046-C-A IR3_Prx ***
2666449-TACACAC-T 2798408-TACACAC-T 13×AC***
7321437-C-T 7453396-C-T ***
2811586-CA-C 2943545-CA-C ***
2821374-TTACAAAAAAAAAAAAAAAAATCATGGGGG-T,TTACAAAAAAAAAAAAAAAATCATGGGGG 2953333-TTACAAAAAAAAAAAAAAAAATCATGGGGG-T,TTACAAAAAAAAAAAAAAAATCATGGGGG ***
2970188-C-A 3102147-C-A ***
3834924-A-G 3966883-A-G ***
6341795-C-A 6473754-C-A ***
6765549-C-A 6897508-C-A ***
6900154-C-A 7032113-C-A ***
6948816-C-A 7080775-C-A ***
6995127-CAAA-C,CAA 7127086-CAAA-C,CAA 13×A***
7008613-C-A 7140572-C-A ***
7103087-G-T 7235046-G-T ***
7103201-G-T 7235160-G-T ***
7126550-G-A 7258509-G-A ***
7237709-T-C 7369668-T-C ***
13867103-T-A 11746397-T-A ***
9498832-T-A 9661223-T-A ***
7342066-G-T 7474025-G-T ***
7386920-A-T 7518879-A-T ***
7646810-G-T 7778769-G-T ***
7659755-C-A 7791714-C-A ***
7749394-C-A 7881353-C-A ***
7979619-GT-G 8111578-GT-G ***
8311526-C-A 8443485-C-A ***
8540701-C-A 8672660-C-A ***
8865690-A-G 8997649-A-G ***
8901323-T-TAA 9033282-T-TAA ***
9461331-AG-A 9623722-AG-A ***
9462671-A-G 9625062-A-G ***
9463006-C-A 9625397-C-A ***
9485891-A-T 9648282-A-T ***
6878072-TCA-T 7010031-TCA-T ***
5240968-C-CTCCT 5372927-C-CTCCT ***
24232028-T-G 22085881-T-G P3_b1 ***
26579769-C-T 24433622-C-T P1_g2 ***
25967699-A-T 23821552-A-T P1_Y1 ***
25981016-G-T 23834869-G-T P1_Y1 ***
26022137-T-G 23875990-T-G P1_Y1 ***
26098395-A-T 23952248-A-T P1_Y1 ***
26123083-C-T 23976936-C-T P1_Y1 ***
26139317-T-A 23993170-T-A P1_Y1 ***
26180393-G-A 24034246-G-A P1_Y1 ***
26308884-C-T 24162737-C-T P1_Y1 ***
26308991-C-T 24162844-C-T P1_Y1 ***
26352177-C-T 24206030-C-T P1_Y1 ***
26400964-C-T 24254817-C-T P1_Y1 10×T***
26440257-T-A 24294110-T-A P1_Y1 ***
26501701-T-G 24355554-T-G P1_Y1 ***
26614025-G-T 24467878-G-T P1_g2 ***
25939358-C-A 23793211-C-A P1_Y1 ***
26713612-T-A 24567465-T-A P1_g2 ***
26761566-C-T 24615419-C-T P1_g2 ***
26781628-G-T 24635481-G-T P1_g2 ***
26906693-G-A 24760546-G-A P1_r3 ***
26921347-A-G 24775200-A-G P1_r3 ***
26971542-A-T 24825395-A-T P1_r4 ***
26991150-G-T 24845003-G-T P1_r4 ***
27001607-G-T 24855460-G-T P1_r4 ***
27209624-T-C 25063477-T-C P1_g3 ***
27224930-G-A 25078783-G-A P1_g3 ***
27319719-A-T 25173572-A-T P1_g3 ***
27340630-A-C 25194483-A-C P1_g3 ***
27398160-T-A 25252013-T-A P1_g3 ***
27454987-G-T 25308840-G-T P1_Y2 ***
25945001-G-T 23798854-G-T P1_Y1 ***
25927924-C-T 23781777-C-T P1_Y1 ***
27496756-C-T 25350609-C-T P1_Y2 ***
25107018-A-T 22960871-A-T g1 ***
24235568-T-A 22089421-T-A P3_b1 ***
24331053-C-T 22184906-C-T P3_t1 ***
24633651-G-T 22487504-G-T P3_t2 ***
24646656-T-G 22500509-T-G P3_b2 ***
24836188-T-C 22690041-T-C P3_b2 ***
24862213-T-C 22716066-T-C P3_b2 ***
24862218-T-G 22716071-T-G P3_b2 ***
24862243-T-C 22716096-T-C P3_b2 ***
24862247-T-A 22716100-T-A P3_b2 ***
24914967-G-A 22768820-G-A g1 ***
24915439-T-G 22769292-T-G g1 ***
24932891-C-T 22786744-C-T g1 ***
24965513-C-A 22819366-C-A g1 ***
25165625-A-G 23019478-A-G g1 ***
25825715-A-G 23679568-A-G P1_b3 ***
25246715-A-T 23100568-A-T P2_r1 ***
25308388-G-T 23162241-G-T P2_r1 ***
25323043-C-G 23176896-C-G P2_r1 ***
25350094-G-A 23203947-G-A P2_r1 ***
25466278-T-A 23320131-T-A P2_r2 ***
25471990-T-C 23325843-T-C P2_r2 ***
25520236-G-T 23374089-G-T P1_gr1 ***
25560266-T-C 23414119-T-C P1_gr1 ***
25636238-T-C 23490091-T-C P1_b3 ***
25696605-G-A 23550458-G-A P1_b3 ***
25716014-C-A 23569867-C-A P1_b3 ***
25749574-T-A 23603427-T-A P1_b3 ***
25805538-G-C 23659391-G-C P1_b3 ***
25825453-C-T 23679306-C-T P1_b3 ***
27485129-T-A 25338982-T-A P1_Y2 ***
27516672-T-C 25370525-T-C P1_Y2 ***
5036589-TATATATATATAT-CATAC 5168548-TATATATATATAT-CATAC ***
58865572-C-T 56725299-G-A ***
28750511-A-G 26604364-A-G ***
58821778-G-T 56769093-C-A ***
58828204-A-G 56762667-T-C ***
58829858-C-T 56761013-G-A ***
58833559-A-T 56757312-T-A ***
58837088-G-C 56753783-C-G ***
58838467-G-T 56752404-C-A ***
58838629-C-G 56752242-G-C ***
58840790-C-T 56750081-G-A ***
58846605-G-C 56744266-C-G ***
58858755-T-A 56732116-A-T ***
58860589-A-T 56730282-T-A ***
58862743-C-G 56728128-G-C ***
58865597-G-A 56725274-C-T ***
28411845-C-A 26265698-C-A P1_gr2 ***
58869411-C-A 56721460-G-T ***
58869425-C-G 56721446-G-C ***
58884859-T-G 56706012-A-C ***
58884957-T-A 56705914-A-T ***
58886973-G-C 56703898-C-G ***
58912879-A-T 56677992-T-A ***
58914749-A-C 56676122-T-G ***
24388088-A-ATT 22241941-A-ATT ***
9522033-TCTAC-T 9684424-TCTAC-T ***
5240905-CCCTT-C 5372864-CCCTT-C 13×CCTT***
15047302-T-TA 12935393-T-TA ***
17527374-ATGTG-A 15415494-ATGTG-A ***
26461472-T-TA 24315325-T-TA P1_Y1 17×A***
4503357-ATTT-A 4635316-ATTT-A ***
28477949-C-T 26331802-C-T ***
28336700-T-C 26190553-T-C P1_b4 ***
27525673-T-A 25379526-T-A P1_Y2 ***
27733578-C-A 25587431-C-A P1_Y2 ***
27528895-T-G 25382748-T-G P1_Y2 ***
27528896-G-T 25382749-G-T P1_Y2 ***
27528897-T-A 25382750-T-A P1_Y2 ***
27528905-C-A 25382758-C-A P1_Y2 ***
27528909-T-C 25382762-T-C P1_Y2 ***
27528910-C-A 25382763-C-A P1_Y2 ***
27586041-G-T 25439894-G-T P1_Y2 ***
27595230-T-C 25449083-T-C P1_Y2 ***
27604258-T-G 25458111-T-G P1_Y2 ***
27651651-C-G 25505504-C-G P1_Y2 ***
27662265-T-C 25516118-T-C P1_Y2 ***
27692037-G-A 25545890-G-A P1_Y2 ***
27733352-A-G 25587205-A-G P1_Y2 ***
27733573-C-T 25587426-C-T P1_Y2 ***
27824185-C-T 25678038-C-T P1_Y2 ***
28333174-A-T 26187027-A-T P1_b4 ***
27861831-T-G 25715684-T-G P1_Y2 ***
27861840-C-T 25715693-C-T P1_Y2 ***
27861853-A-T 25715706-A-T P1_Y2 ***
27869828-C-G 25723681-C-G P1_Y2 ***
27994483-C-T 25848336-C-T P1_Y2 ***
28007383-G-A 25861236-G-A P1_Y2 ***
28007741-G-T 25861594-G-T P1_Y2 ***
28022960-G-A 25876813-G-A P1_Y2 11×A***
28115015-T-G 25968868-T-G P1_b4 ***
28117251-C-A 25971104-C-A P1_b4 ***
28190690-G-T 26044543-G-T P1_b4 ***
28281578-C-T 26135431-C-T P1_b4 ***
28333154-A-C 26187007-A-C P1_b4 ***
28333163-C-A 26187016-C-A P1_b4 ***
7321439-T-C 7453398-T-C ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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