Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > M222 > DF106 > DF104 > DF105 > DF85 > S673 > S668 > DF97 > ZZ36 > FGC19851

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
0S0X3
Manual
Edits
4177860-C-T 4309819-C-T FGC8743 +
6481626-G-C 6613585-G-C FGC8744 +
7681783-G-A 7813742-G-A FGC8745 YY+
14348912-G-A 12228207-G-A FGC8749 YY+
7736528-A-C 7868487-A-C FGC8746 YY+
18997114-A-G 16885234-A-G FGC8750 YY+
3278335-G-C 3410294-G-C FGC8742 +
21484391-C-A 19322505-C-A FGC8752 YY*
2663856-C-A 2795815-C-A FGC8741 YY*
5766572-T-A 5898531-T-A FGC8737 *
14274270-T-C 12153564-T-C FGC8748 YY*
8973885-G-C 9136276-G-C FGC8747 *
21377985-G-A 19216099-G-A FGC8751 Y*
3148420-CTTTTTT-C 3280379-CTTTTTT-C 18×T**
22300905-C-A 20139019-C-A DYZ19 **
22300886-C-A 20139000-C-A DYZ19 **
59003207-TAAA-T 56857060-TAAA-T 13×A**
22360139-C-A 20198253-C-A DYZ19 **
13419289-T-C 11263613-T-C **
8109789-G-GTTA 8241748-G-GTTA 7×TTA**
5502827-C-CTG 5634786-C-CTG 17×TG**
20821939-AGTGT-A 18660053-AGTGT-A P4_Gap 16×GT**
22342544-A-G 20180658-A-G DYZ19 **
13488496-T-C 11332820-T-C **
22337320-T-G 20175434-T-G DYZ19 **
21464187-GGAAAGAAAGAAA-G 19302301-GGAAAGAAAGAAA-G 12×GAAA**
21824255-C-CAAAA 19662369-C-CAAAA 30×A**
13504498-C-CAA 11348822-C-CAA 12×A**
22495764-C-G 20333878-C-G DYZ19 **
22360107-C-G 20198221-C-G DYZ19 **
24491376-A-C 22345229-A-C ***
22353342-A-T 20191456-A-T DYZ19 ***
22343322-T-G 20181436-T-G DYZ19 ***
24541913-A-T 22395766-A-T P3_t2 ***
22342635-C-A 20180749-C-A DYZ19 ***
24541915-A-T 22395768-A-T P3_t2 ***
24541935-T-C 22395788-T-C P3_t2 ***
24567076-A-T 22420929-A-T P3_t2 ***
24567077-A-C 22420930-A-C P3_t2 ***
22338473-T-A 20176587-T-A DYZ19 ***
22338200-G-C 20176314-G-C DYZ19 ***
22338195-A-C 20176309-A-C DYZ19 ***
22338175-G-T 20176289-G-T DYZ19 ***
25173299-G-T 23027152-G-T g1 ***
24541722-T-A 22395575-T-A P3_t2 ***
25268602-G-A 23122455-G-A P2_r1 ***
22338163-G-C 20176277-G-C DYZ19 ***
22337363-C-T 20175477-C-T DYZ19 ***
25447254-A-G 23301107-A-G P2_r2 ***
25880503-A-T 23734356-A-T P1_Y1 ***
22337276-G-C 20175390-G-C DYZ19 ***
22326891-G-A 20165005-G-A DYZ19 ***
25880511-G-A 23734364-G-A P1_Y1 ***
22325533-C-T 20163647-C-T DYZ19 ***
22282205-C-T 20120319-C-T DYZ19 ***
25880512-G-A 23734365-G-A P1_Y1 ***
25880515-A-C 23734368-A-C P1_Y1 ***
22282201-G-A 20120315-G-A DYZ19 ***
24541894-G-T 22395747-G-T P3_t2 ***
22361117-G-T 20199231-G-T DYZ19 ***
24491399-G-A 22345252-G-A ***
24530064-T-G 22383917-T-G P3_t2 ***
24491372-C-T 22345225-C-T ***
24491282-G-T 22345135-G-T ***
24491246-G-A 22345099-G-A ***
24487973-G-A 22341826-G-A ***
24207547-A-T 22061400-A-T P3_b1 ***
24530061-T-A 22383914-T-A P3_t2 ***
23727415-T-G 21565529-T-G ***
23727411-T-A 21565525-T-A ***
23227545-A-T 21065659-A-T ***
23223306-C-A 21061420-C-A ***
24530063-T-G 22383916-T-G P3_t2 ***
22504802-G-T 20342916-G-T DYZ19 ***
22504513-G-C 20342627-G-C DYZ19 ***
22502335-C-T 20340449-C-T DYZ19 ***
22502206-G-T 20340320-G-T DYZ19 ***
22361118-G-T 20199232-G-T DYZ19 ***
22496055-G-A 20334169-G-A DYZ19 ***
22276818-A-T 20114932-A-T DYZ19 ***
22496017-G-T 20334131-G-T DYZ19 ***
22496008-C-G 20334122-C-G DYZ19 ***
22481617-T-A 20319731-T-A DYZ19 ***
22426382-G-T 20264496-G-T DYZ19 ***
22421573-G-T 20259687-G-T DYZ19 ***
22421559-C-A 20259673-C-A DYZ19 ***
22421312-T-C 20259426-T-C DYZ19 ***
22366390-C-T 20204504-C-T DYZ19 ***
22366380-A-G 20204494-A-G DYZ19 ***
22366024-G-A 20204138-G-A DYZ19 ***
22364784-T-A 20202898-T-A DYZ19 ***
22364398-T-A 20202512-T-A DYZ19 ***
22496024-T-A 20334138-T-A DYZ19 ***
13478852-G-C 11323176-G-C ***
22268152-T-A 20106266-T-A DYZ19 ***
20241886-T-A 18080000-T-A P5_Dst ***
19930738-T-C 17818858-T-C P5_Prx ***
19930747-A-G 17818867-A-G P5_Prx ***
19930761-A-T 17818881-A-T P5_Prx ***
19997513-A-C 17885633-A-C P5_Prx ***
20241876-A-T 18079990-A-T P5_Dst ***
20241877-C-T 18079991-C-T P5_Dst ***
20241906-A-C 18080020-A-C P5_Dst ***
19930718-C-T 17818838-C-T P5_Prx ***
20388813-C-G 18226927-C-G P5_Dst ***
20388819-G-A 18226933-G-A P5_Dst ***
20388839-G-A 18226953-G-A P5_Dst ***
20388851-G-A 18226965-G-A P5_Dst ***
20388855-G-A 18226969-G-A P5_Dst ***
20416623-G-A 18254737-G-A P5_Dst ***
20416625-A-T 18254739-A-T P5_Dst ***
19930735-C-T 17818855-C-T P5_Prx ***
19930715-T-A 17818835-T-A P5_Prx ***
20416638-T-A 18254752-T-A P5_Dst ***
19661096-C-G 17549216-C-G P5_Prx ***
18448018-C-T 16336138-C-T P6_Dst ***
19638770-G-A 17526890-G-A P5_Prx ***
19638817-C-T 17526937-C-T P5_Prx ***
19638818-C-T 17526938-C-T P5_Prx ***
19638819-T-C 17526939-T-C P5_Prx ***
19661093-A-T 17549213-A-T P5_Prx ***
19691227-G-A 17579347-G-A P5_Prx ***
19930710-C-G 17818830-C-G P5_Prx ***
19864137-C-T 17752257-C-T P5_Prx ***
19864146-C-G 17752266-C-G P5_Prx ***
19864150-T-G 17752270-T-G P5_Prx ***
19864169-T-C 17752289-T-C P5_Prx ***
19930700-C-G 17818820-C-G P5_Prx ***
19930702-T-A 17818822-T-A P5_Prx ***
19930709-A-G 17818829-A-G P5_Prx ***
20416636-T-G 18254750-T-G P5_Dst ***
20416642-A-T 18254756-A-T P5_Dst ***
22248418-A-C 20086532-A-C DYZ19 ***
22231848-T-C 20069962-T-C DYZ19 ***
22224389-C-A 20062503-C-A DYZ19 ***
22224396-G-T 20062510-G-T DYZ19 ***
22226560-C-T 20064674-C-T DYZ19 ***
22231821-T-A 20069935-T-A DYZ19 ***
22231827-T-A 20069941-T-A DYZ19 ***
22231837-G-T 20069951-G-T DYZ19 ***
22231858-A-G 20069972-A-G DYZ19 ***
21060909-A-G 18899023-A-G ***
22231861-G-C 20069975-G-C DYZ19 ***
25880545-A-G 23734398-A-G P1_Y1 ***
22231906-C-G 20070020-C-G DYZ19 ***
22231916-A-G 20070030-A-G DYZ19 ***
22235081-C-A 20073195-C-A DYZ19 ***
22235082-T-G 20073196-T-G DYZ19 ***
22235092-A-T 20073206-A-T DYZ19 ***
21198488-C-A 19036602-C-A ***
21021922-A-G 18860036-A-G P4_Dst ***
20416645-C-T 18254759-C-T P5_Dst ***
20542071-A-C 18380185-A-C P5_Dst ***
20416646-A-T 18254760-A-T P5_Dst ***
20416650-C-T 18254764-C-T P5_Dst ***
20542029-G-C 18380143-G-C P5_Dst ***
20542051-A-G 18380165-A-G P5_Dst ***
20542059-T-C 18380173-T-C P5_Dst ***
20542063-T-G 18380177-T-G P5_Dst ***
20574099-G-C 18412213-G-C P5_Dst ***
21021905-C-A 18860019-C-A P4_Dst ***
20609886-G-T 18448000-G-T P5_Dst ***
20637661-T-C 18475775-T-C P4_Prx ***
20662002-A-G 18500116-A-G P4_Prx ***
20662004-A-C 18500118-A-C P4_Prx ***
20662008-A-T 18500122-A-T P4_Prx ***
20662011-C-A 18500125-C-A P4_Prx ***
21021895-A-G 18860009-A-G P4_Dst ***
25880517-A-T 23734370-A-T P1_Y1 ***
25952875-C-A 23806728-C-A P1_Y1 ***
25928265-A-T 23782118-A-T P1_Y1 ***
13314507-CTTG-TTCA 11158831-CTTG-TTCA ***
5872243-CA-C 6004202-CA-C 15×A***
8075936-CTTTT-C 8207895-CTTTT-C 17×T***
8644324-C-CAAAAAAAA 8776283-C-CAAAAAAAA 32×A***
9371457-CATATATATATATATATAT-C 9533848-CATATATATATATATATAT-C 22×AT***
10030704-AT-GC 10193095-AT-GC ***
13279998-CAAAAAAAAAA-C 11124322-CAAAAAAAAAA-C 26×A***
13314462-TGTCGGCTGT-CGTCCCCTGC 11158786-TGTCGGCTGT-CGTCCCCTGC ***
13465441-ACCCA-TCCCC 11309765-ACCCA-TCCCC ***
4402868-GA-G 4534827-GA-G 13×A***
13475909-TCCCCCAATAA-GCCCTCAGTAT 11320233-TCCCCCAATAA-GCCCTCAGTAT ***
13478285-GGGCGCCT-CGGCGCCC 11322609-GGGCGCCT-CGGCGCCC ***
13478796-TA-CG 11323120-TA-CG ***
13488971-CC-TG 11333295-CC-TG ***
13535701-AC-GT 11380025-AC-GT ***
13865969-CGAATGGAATG-C 11745263-CGAATGGAATG-C 12×GAATG***
15410633-C-CA 13298753-C-CA 28×A***
5083951-TC-T 5215910-TC-T ***
2807024-TTATATATA-T 2938983-TTATATATA-T 20×TA***
15815336-CAA-C 13703456-CAA-C 57×A***
58884295-T-C 56706576-A-G ***
58877052-T-A 56713819-A-T ***
58877112-T-C 56713759-A-G ***
58877114-C-A 56713757-G-T ***
58880952-G-T 56709919-C-A ***
58882015-C-G 56708856-G-C ***
58882338-C-A 56708533-G-T ***
58882385-T-C 56708486-A-G ***
58893322-T-G 56697549-A-C ***
20025431-TC-CT 17913551-TC-CT P5_Prx ***
58893785-G-C 56697086-C-G ***
58907254-A-C 56683617-T-G ***
58907255-A-G 56683616-T-C ***
58907261-A-T 56683610-T-A ***
58910820-A-T 56680051-T-A ***
58910849-T-C 56680022-A-G ***
16651979-G-GGT 14540099-G-GGT 12×GT***
15733879-C-CAAAAA 13621999-C-CAAAAA 25×A***
16665450-G-GTT 14553570-G-GTT ***
58877039-C-G 56713832-G-C ***
25928320-TT-AA 23782173-TT-AA P1_Y1 ***
22337320-TTT-GTG 20175434-TTT-GTG DYZ19 ***
22341150-TTCTC-ATCTT 20179264-TTCTC-ATCTT DYZ19 ***
22344364-AAGTC-GAGAT 20182478-AAGTC-GAGAT DYZ19 ***
22703630-GAAAG-AAAAA 20541744-GAAAG-AAAAA ***
24447151-AAAG-GAAA 22301004-AAAG-GAAA ***
24813128-A-ATCCCCCC 22666981-A-ATCCCCCC P3_b2 ***
25268596-GAAATAG-AAAAAAA 23122449-GAAATAG-AAAAAAA P2_r1 ***
27862559-A-AGAGG 25716412-A-AGAGG P1_Y2 ***
22232060-TTT-ATC 20070174-TTT-ATC DYZ19 ***
58820472-CATT-TATA 56770396-AATG-TATA ***
58840549-GACATTCGATTCCGTTT-TAGATGCCAGTCGAATC 56750306-AAACGGAATCGAATGTC-GATTCGACTGGCATCTA ***
58840581-CATACA-TATTCAG 56750285-TGTATG-CTGAATA ***
58843759-CCATTA-ACAATC 56747107-TAATGG-GATTGT ***
58867416-CAT-GAG 56723453-ATG-CTC ***
58867425-CT-GC 56723445-AG-GC ***
58867433-TTC-GTG 56723436-GAA-CAC ***
22248429-CAC-GAT 20086543-CAC-GAT DYZ19 ***
22232041-AAACTCTGGAC-GAACACAGGAT 20070155-AAACTCTGGAC-GAACACAGGAT DYZ19 ***
16757043-A-ATTTTTTTTT 14645163-A-ATTTTTTTTT 27×T***
20542099-TAA-AG 18380213-TAA-AG P5_Dst ***
17459485-C-CAAAAAAA 15347605-C-CAAAAAAA 25×A***
18564316-C-CCTATTTTTTT 16452436-C-CCTATTTTTTT 19×T***
19926955-CTTTTTTTTTT-C 17815075-CTTTTTTTTTT-C P5_Prx 23×T***
19930735-CAGT-TAGC 17818855-CAGT-TAGC P5_Prx ***
20542035-ATC-GTT 18380149-ATC-GTT P5_Dst ***
20542055-CT-C 18380169-CT-C P5_Dst ***
20542093-T-TA 18380207-T-TA P5_Dst ***
20574069-GCCC-TCCT 18412183-GCCC-TCCT P5_Dst ***
22232028-TATC-CATG 20070142-TATC-CATG DYZ19 ***
20574092-AG-CT 18412206-AG-CT P5_Dst ***
21639038-T-TA 19477152-T-TA 25×A***
21846452-C-CTTTT 19684566-C-CTTTT 26×T***
22231858-ACTG-GGTC 20069972-ACTG-GGTC DYZ19 ***
22231879-GC-CT 20069993-GC-CT DYZ19 ***
22231983-AGTG-GGTC 20070097-AGTG-GGTC DYZ19 ***
22232004-TC-CT 20070118-TC-CT DYZ19 ***
58877042-C-A 56713829-G-T ***
58875219-C-T 56715652-G-A ***
25928271-A-T 23782124-A-T P1_Y1 ***
27155022-G-C 25008875-G-C P1_g3 ***
26504984-T-A 24358837-T-A P1_Y1 ***
26504990-C-T 24358843-C-T P1_Y1 ***
26504998-T-A 24358851-T-A P1_Y1 ***
26504999-G-A 24358852-G-A P1_Y1 ***
26505004-A-T 24358857-A-T P1_Y1 ***
26636940-A-T 24490793-A-T P1_g2 ***
26928098-G-T 24781951-G-T P1_r3 ***
27155028-A-C 25008881-A-C P1_g3 ***
26504966-G-A 24358819-G-A P1_Y1 ***
27155054-G-A 25008907-G-A P1_g3 ***
27155069-T-C 25008922-T-C P1_g3 ***
27237538-C-A 25091391-C-A P1_g3 ***
27237544-A-T 25091397-A-T P1_g3 ***
27237564-T-A 25091417-T-A P1_g3 ***
27237565-C-A 25091418-C-A P1_g3 ***
27482612-A-C 25336465-A-C P1_Y2 ***
26504973-G-A 24358826-G-A P1_Y1 ***
26380031-A-T 24233884-A-T P1_Y1 ***
27916090-T-A 25769943-T-A P1_Y2 ***
26069812-C-T 23923665-C-T P1_Y1 ***
25928272-C-T 23782125-C-T P1_Y1 ***
25928274-G-T 23782127-G-T P1_Y1 ***
25928279-T-C 23782132-T-C P1_Y1 ***
25952868-T-G 23806721-T-G P1_Y1 ***
17836841-T-C 15724961-T-C ***
25952880-C-A 23806733-C-A P1_Y1 ***
25952886-A-T 23806739-A-T P1_Y1 ***
26069814-A-G 23923667-A-G P1_Y1 ***
26380028-C-G 24233881-C-G P1_Y1 ***
26069819-T-A 23923672-T-A P1_Y1 ***
26069823-G-A 23923676-G-A P1_Y1 ***
26069831-T-A 23923684-T-A P1_Y1 ***
26069835-G-A 23923688-G-A P1_Y1 ***
26069843-C-T 23923696-C-T P1_Y1 ***
26069846-G-A 23923699-G-A P1_Y1 ***
26069859-A-C 23923712-A-C P1_Y1 ***
27877810-C-T 25731663-C-T P1_Y2 ***
27971163-T-G 25825016-T-G P1_Y2 ***
58872367-A-G 56718504-T-C ***
58862124-C-G 56728747-G-C ***
58851959-C-A 56738912-G-T ***
58851970-A-T 56738901-T-A ***
58851984-G-A 56738887-C-T ***
58851985-A-T 56738886-T-A ***
58851989-C-A 56738882-G-T ***
58858571-C-T 56732300-G-A ***
58859096-G-C 56731775-C-G ***
58865672-A-C 56725199-T-G ***
58851848-T-C 56739023-A-G ***
58865674-A-T 56725197-T-A ***
58865678-C-T 56725193-G-A ***
58865689-A-G 56725182-T-C ***
58867298-G-T 56723573-C-A ***
58867342-A-T 56723529-T-A ***
58867450-C-G 56723421-G-C ***
58869660-C-G 56721211-G-C ***
58851876-T-A 56738995-A-T ***
58847786-T-A 56743085-A-T ***
27971164-T-A 25825017-T-A P1_Y2 ***
58840601-G-C 56750270-C-G ***
58824606-A-T 56766265-T-A ***
58824608-C-G 56766263-G-C ***
58833744-T-A 56757127-A-T ***
58833746-C-A 56757125-G-T ***
58833756-T-C 56757115-A-G ***
58837857-C-T 56753014-G-A ***
58838250-C-G 56752621-G-C ***
58843700-C-A 56747171-G-T ***
58847778-T-A 56743093-A-T ***
58843762-T-A 56747109-A-T ***
58843783-T-G 56747088-A-C ***
58843784-C-A 56747087-G-T ***
58845704-C-A 56745167-G-T ***
58846526-T-A 56744345-A-T ***
58847309-T-A 56743562-A-T ***
58847772-C-G 56743099-G-C ***
18328777-T-A 16216897-T-A P6_Prx 26×A***
14625453-G-A 12513721-G-A ***
17446767-C-T 15334887-C-T 33×T***
9940052-C-A 10102443-C-A ***
13476296-AG-CA 11320620-AG-CA ***
22236464-CCCACCAAG-ACAACTAA 20074578-CCCACCAAG-ACAACTAA DYZ19 ***
22361071-CTA-AG 20199185-CTA-AG DYZ19 ***
58915830-CCATTTGATT-ACA 56675032-AATCAAATGG-TGT ***
22263840-CAT-TCC 20101954-CAT-TCC DYZ19 ***
9940038-T-C 10102429-T-C ***
13474828-A-G 11319152-A-G ***
24381403-T-AA 22235256-T-AA ***
17684071-A-G 15572191-A-G ***
17684085-A-T 15572205-A-T ***
17684089-G-A 15572209-G-A ***
20574069-G-T 18412183-G-T P5_Dst ***
20574072-C-T 18412186-C-T P5_Dst ***
20574077-G-A 18412191-G-A P5_Dst ***
22366393-T-G 20204507-T-G DYZ19 ***
22495773-TCCAA-CTTCAG 20333887-TCCAA-CTTCAG DYZ19 ***
3845140-TG-T 3977099-TG-T 11×G***
20574057-A-G 18412171-A-G P5_Dst ***
10090703-A-C 10253094-A-C ***
22365869-T-G 20203983-T-G DYZ19 ***
22367155-T-A 20205269-T-A DYZ19 ***
4867555-TCA-T 4999514-TCA-T 19×CA***
22498798-TCTGT-ACTGG 20336912-TCTGT-ACTGG DYZ19 ***
13485041-G-C 11329365-G-C ***
22292968-A-G 20131082-A-G DYZ19 ***
13730431-G-C 11574755-G-C ***
4738920-GAACTTTCCA-CTACAAACCAC 4870879-GAACTTTCCA-CTACAAACCAC ***
22292969-T-A 20131083-T-A DYZ19 ***
22358966-C-G 20197080-C-G DYZ19 ***
58840540-A-T 56750331-T-A ***
58846521-T-A 56744350-A-T ***
58846525-G-T 56744346-C-A ***
58840628-GGCCT-TGCCA 56750239-AGGCC-TGGCA ***
22495753-CAGG-AAGGT 20333867-CAGG-AAGGT DYZ19 ***
3483637-GAC-G 3615596-GAC-G 15×AC***
22360693-T-A 20198807-T-A DYZ19 ***
58839001-A-ATTTCT 56751867-C-CAAAGA ***
58877024-A-C 56713847-T-G ***
13708398-A-C 11552722-A-C ***
58824566-T-G 56766305-A-C ***
58824571-T-A 56766300-A-T ***
22352889-C-T 20191003-C-T DYZ19 ***
22341728-T-G 20179842-T-G DYZ19 ***
58846165-C-A 56744706-G-T ***
13728606-G-A 11572930-G-A ***
22341715-A-G 20179829-A-G DYZ19 ***
13728612-C-T 11572936-C-T ***
58839820-C-G 56751051-G-C ***
22456895-A-G 20295009-A-G DYZ19 ***
22352870-A-C 20190984-A-C DYZ19 ***
22292945-G-T 20131059-G-T DYZ19 ***
22293000-G-A 20131114-G-A DYZ19 ***
58843809-G-C 56747062-C-G ***
58843442-TGTGGT-ATTGAC 56747424-ACCACA-GTCAAT ***
22226684-A-G 20064798-A-G DYZ19 ***
22361637-T-G 20199751-T-G DYZ19 ***
58851871-A-T 56739000-T-A ***
58828536-C-G 56762335-G-C ***
58913158-T-G 56677713-A-C ***
22252860-ATCC-GTCA 20090974-ATCC-GTCA DYZ19 ***
22252965-GG-TT 20091079-GG-TT DYZ19 ***
22364706-G-T 20202820-G-T DYZ19 ***
13703198-T-A 11547522-T-A ***
22342731-G-C 20180845-G-C DYZ19 ***
9954500-G-C 10116891-G-C ***
13393262-A-C 11237586-A-C Z17854 ***
13483759-T-A 11328083-T-A ***
26325360-T-A 24179213-T-A FGC18808 P1_Y1 ***
5007689-CAA-C 5139648-CAA-C 22×A***
22282156-TCTTC-CCTTT 20120270-TCTTC-CCTTT DYZ19 ***
58850718-ACCTTGCATTACACTC-A 56740133-GAAGGGAGTGTAATGC-G ***
13485025-T-G 11329349-T-G ***
13485030-C-A 11329354-C-A ***
13129569-T-C 10619055-T-C ***
22236408-AT-TG 20074522-AT-TG DYZ19 ***
13701962-A-T 11546286-A-T ***
22495804-AGTGT-TGTGA 20333918-AGTGT-TGTGA DYZ19 ***
58890337-A-G 56700534-T-C ***
59000770-T-TTGG 56854623-T-TTGG ***
13386059-GAAA-G 11230383-GAAA-G 10×A***
13842553-CC-GA 11721847-CC-GA ***
22341613-ACAGA-CCAGT 20179727-ACAGA-CCAGT DYZ19 ***
22343862-TATG-GATA 20181976-TATG-GATA DYZ19 ***
3550569-CAACTC-AAAAAA 3682528-CAACTC-AAAAAA ***
58882573-G-C 56708298-C-G ***
22268350-A-G 20106464-A-G DYZ19 ***
13440798-A-C 11285122-A-C ***
13319909-A-C 11164233-A-C ***
19656617-C-A 17544737-C-A P5_Prx ***
22235037-A-T 20073151-A-T DYZ19 ***
22248716-T-G 20086830-T-G DYZ19 ***
22251619-A-T 20089733-A-T DYZ19 ***
58885381-C-T 56705490-G-A ***
58872625-T-C 56718246-A-G ***
22268290-C-A 20106404-C-A DYZ19 ***
13129703-T-A 10619189-T-A ***
22365118-G-A 20203232-G-A DYZ19 ***
22361304-G-A 20199418-G-A DYZ19 ***
22344856-A-T 20182970-A-T DYZ19 ***
22344854-A-C 20182968-A-C DYZ19 ***
13129672-T-C 10619158-T-C ***
13129694-A-C 10619180-A-C ***
13129700-C-G 10619186-C-G ***
13328958-G-C 11173282-G-C ***
58843776-G-A 56747095-C-T ***
22268260-C-A 20106374-C-A DYZ19 ***
22268278-G-A 20106392-G-A DYZ19 ***
22268293-A-G 20106407-A-G DYZ19 ***
22360686-G-T 20198800-G-T DYZ19 ***
22366828-G-T 20204942-G-T DYZ19 ***
22481674-T-A 20319788-T-A DYZ19 ***
25268596-G-A 23122449-G-A P2_r1 ***
22257091-T-G 20095205-T-G DYZ19 ***
22309445-T-A 20147559-T-A DYZ19 ***
13463838-TTT-GGC 11308162-TTT-GGC ***
22252974-A-T 20091088-A-T DYZ19 ***
58829066-T-A 56761805-A-T ***
58841100-T-C 56749771-A-G ***
58875042-G-T 56715829-C-A ***
22366765-TCTC-CCTT 20204879-TCTC-CCTT DYZ19 ***
22422023-ATGTC-TTGGT 20260137-ATGTC-TTGGT DYZ19 ***
22309360-T-G 20147474-T-G DYZ19 ***
22268224-G-T 20106338-G-T DYZ19 ***
22365986-A-G 20204100-A-G DYZ19 ***
22268231-G-C 20106345-G-C DYZ19 ***
22365946-C-T 20204060-C-T DYZ19 ***
22366968-C-A 20205082-C-A DYZ19 ***
22421293-A-G 20259407-A-G DYZ19 ***
22481701-G-T 20319815-G-T DYZ19 ***
58838996-C-A 56751875-G-T ***
58909170-C-G 56681701-G-C ***
22503065-A-T 20341179-A-T DYZ19 ***
22365985-C-A 20204099-C-A DYZ19 ***
22311188-T-C 20149302-T-C DYZ19 ***
9959717-TGT-CGC 10122108-TGT-CGC ***
22360717-C-A 20198831-C-A DYZ19 ***
24535247-A-C 22389100-A-C A10467 P3_t2 ***
58872938-C-T 56717933-G-A ***
58872956-C-T 56717915-G-A ***
58872962-A-C 56717909-T-G ***
58872982-A-T 56717889-T-A ***
58910843-G-C 56680028-C-G ***
58843776-GTA-ATT 56747093-TAC-AAT ***
22365984-G-T 20204098-G-T DYZ19 ***
13389947-T-C 11234271-T-C ***
13565410-T-C 11409734-T-C ***
22248366-A-C 20086480-A-C DYZ19 ***
22250305-G-T 20088419-G-T DYZ19 ***
22268297-G-T 20106411-G-T DYZ19 ***
22268341-T-A 20106455-T-A DYZ19 ***
22361338-C-A 20199452-C-A DYZ19 ***
22273685-C-A 20111799-C-A DYZ19 ***
58909168-G-T 56681703-C-A ***
16868715-C-T 14756835-C-T ***
13256631-T-C 11100955-T-C ***
10094693-G-C 10257084-G-C ***
10094700-C-A 10257091-C-A ***
10094709-T-A 10257100-T-A ***
13122803-C-T 10612289-C-T ***
13122806-A-C 10612292-A-C ***
13222451-G-A 11066775-G-A ***
13281261-C-T 11125585-C-T ***
10090744-A-G 10253135-A-G ***
13314462-T-C 11158786-T-C ***
13314466-G-C 11158790-G-C ***
13314467-G-C 11158791-G-C ***
13314471-T-C 11158795-T-C ***
13314492-A-G 11158816-A-G YSC0000118 ***
13314507-C-T 11158831-C-T ***
13314509-T-C 11158833-T-C YSC0000119 ***
10094684-C-G 10257075-C-G ***
10090705-C-A 10253096-C-A ***
13314526-C-T 11158850-C-T ***
7119667-T-C 7251626-T-C ***
4682739-A-T 4814698-A-T ***
5095843-A-T 5227802-A-T ***
5113064-C-T 5245023-C-T ***
5260410-C-A 5392369-C-A 20×A***
6244469-A-G 6376428-A-G IR3_Dst ***
6497014-A-T 6628973-A-T ***
6778457-C-T 6910416-C-T ***
7439386-T-C 7571345-T-C ***
10090635-G-A 10253026-G-A ***
9040927-T-A 9203318-T-A ***
10030710-C-T 10193101-C-T ***
10034540-C-T 10196931-C-T ***
10090612-C-G 10253003-C-G ***
10090613-T-C 10253004-T-C ***
10090620-G-A 10253011-G-A ***
10090627-C-G 10253018-C-G ***
13314510-G-A 11158834-G-A ***
13314531-C-T 11158855-C-T ***
4634420-G-A 4766379-G-A ***
13478868-A-C 11323192-A-C ***
13728417-A-T 11572741-A-T ***
13734773-G-A 11579097-G-A ***
13734775-G-T 11579099-G-T ***
13734788-A-C 11579112-A-C ***
13748516-T-C 11592840-T-C ***
13873016-A-T 11752310-A-T ***
14625455-A-G 12513723-A-G ***
13714009-A-G 11558333-A-G ***
14625456-T-G 12513724-T-G ***
15070440-C-T 12958531-C-T ***
15070446-C-T 12958537-C-T 19×A***
15070457-A-T 12958548-A-T ***
15309735-T-A 13197839-T-A ***
15639914-T-C 13528034-T-C ***
15884995-A-G 13773115-A-G ***
13719295-G-A 11563619-G-A ***
13713209-G-A 11557533-G-A ***
13378124-T-A 11222448-T-A ***
13478831-C-A 11323155-C-A ***
13463400-T-A 11307724-T-A ***
13463430-C-A 11307754-C-A ***
13463631-A-T 11307955-A-T ***
13464151-G-T 11308475-G-T ***
13465519-G-T 11309843-G-T ***
13475386-A-G 11319710-A-G ***
13478830-A-T 11323154-A-T ***
13478845-C-T 11323169-C-T ***
13708405-C-G 11552729-C-G ***
13478848-T-A 11323172-T-A ***
13482739-T-C 11327063-T-C ***
13542811-T-G 11387135-T-G ***
13566970-T-C 11411294-T-C ***
13579633-G-A 11423957-G-A ***
13698978-A-T 11543302-A-T ***
13708403-A-G 11552727-A-G ***
4682723-A-T 4814682-A-T ***
3997957-A-T 4129916-A-T ***
13122822-T-C 10612308-T-C ***
58851847-C-T 56739024-G-A ***
13393100-A-C 11237424-A-C ***
13389929-A-G 11234253-A-G ***
22267471-C-G 20105585-C-G DYZ19 ***
22338221-A-T 20176335-A-T DYZ19 ***
25749309-GT-G 23603162-GT-G P1_b3 16×T***
58843666-T-A 56747205-A-T ***
10084452-G-T 10246843-G-T ***
13267597-C-CAAAAAAA 11111921-C-CAAAAAAA 11×A***
22292962-T-G 20131076-T-G DYZ19 ***
22292963-G-T 20131077-G-T DYZ19 ***
58872935-T-C 56717936-A-G ***
13529699-A-C 11374023-A-C ***
5757308-CA-C 5889267-CA-C 18×A***
5393294-G-A 5525253-G-A 10×GAA***
7135386-ATT-A 7267345-ATT-A 22×T***
22338499-T-G 20176613-T-G DYZ19 ***
58848404-C-T 56742467-G-A ***
13314484-A-G 11158808-A-G YSC0000117 ***
13701963-G-A 11546287-G-A ***
13465394-A-T 11309718-A-T ***
58865781-C-T 56725090-G-A ***
58872356-A-C 56718515-T-G ***
58909164-A-C 56681707-T-G ***
13203989-GTGATAATG-TTATGATA 11048313-GTGATAATG-TTATGATA ***
22224431-C-G 20062545-C-G DYZ19 ***
13463630-T-A 11307954-T-A ***
13740718-G-A 11585042-G-A ***
13203961-T-G 11048285-T-G ***
20574093-G-T 18412207-G-T P5_Dst ***
22248429-C-G 20086543-C-G DYZ19 ***
22365935-C-T 20204049-C-T DYZ19 ***
22367501-G-C 20205615-G-C DYZ19 ***
58846525-GT-TA 56744345-AC-TA ***
22338190-A-T 20176304-A-T DYZ19 ***
22365929-C-T 20204043-C-T DYZ19 ***
13258558-CTTTTTT-C 11102882-CTTTTTT-C 20×T***
13328832-A-C 11173156-A-C ***
3752576-C-A 3884535-C-A ***
19997762-C-T 17885882-C-T P5_Prx ***
10006519-T-G 10168910-T-G ***
13464153-A-C 11308477-A-C ***
10006444-A-C 10168835-A-C ***
10006453-A-G 10168844-A-G ***
10006479-T-C 10168870-T-C ***
13463671-T-A 11307995-T-A ***
13314448-T-G 11158772-T-G YSC0000116 ***
58877049-C-T 56713822-G-A ***
22342618-G-A 20180732-G-A DYZ19 ***
28802753-T-C 26656606-T-C ***
13488293-G-A 11332617-G-A ***
25954146-C-T 23807999-C-T P1_Y1 ***
13460916-T-A 11305240-T-A ***
13616426-G-C 11460750-G-C ***
3752573-C-A 3884532-C-A ***
58877050-C-G 56713821-G-C ***
24491273-C-T 22345126-C-T ***
13389911-A-G 11234235-A-G ***
58851841-C-T 56739030-G-A ***
13424873-T-C 11269197-T-C ***
13441099-T-A 11285423-T-A ***
13478854-A-C 11323178-A-C ***
13562208-C-G 11406532-C-G ***
14008776-ACG-A 11888070-ACG-A ***
28491352-G-A 26345205-G-A ***
22366818-C-T 20204932-C-T DYZ19 ***
28802821-T-A 26656674-T-A ***
23227611-G-A 21065725-G-A ***
7758720-CT-C 7890679-CT-C 17×T***
22503472-T-C 20341586-T-C DYZ19 ***
5234764-CT-C 5366723-CT-C 19×T***
5815594-CA-C 5947553-CA-C 22×A***
13734790-G-A 11579114-G-A ***
15639890-T-G 13528010-T-G ***
15639897-A-G 13528017-A-G ***
58903848-ATTCCTTTTGACTCCATTTCATTCGATTCCATTCCT-A 56686983-TGGAAAGGAATGGAATCGAATGAAATGGAGTCAAAA-T ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Haplotype Progression

The data below reveals the progression of changes in the haplotype. The bottom row is the haplotype for this man and above him are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are very much a work in progress, and any suggested modifications are appreciated. I think we can use our vast collection of haplotype data to refine these haplotypes. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

DYS393
DYS390
DYS19
DYS391
DYS385
DYS426
DYS388
DYS439
DYS389i
DYS392
DYS389ii
DYS458
DYS459
DYS455
DYS454
DYS447
DYS437
DYS448
DYS449
DYS464
DYS460
Y-GATA-H4
YCAII
DYS456
DYS607
DYS576
DYS570
CDY
DYS442
DYS438
DYS531
DYS578
DYF395S1
DYS590
DYS537
DYS641
DYS472
DYF406S1
DYS511
DYS425
DYS413
DYS557
DYS594
DYS436
DYS490
DYS534
DYS450
DYS444
DYS481
DYS520
DYS446
DYS617
DYS568
DYS487
DYS572
DYS640
DYS492
DYS565
DYS710
DYS485
DYS632
DYS495
DYS540
DYS714
DYS716
DYS717
DYS505
DYS556
DYS549
DYS589
DYS522
DYS494
DYS533
DYS636
DYS575
DYS638
DYS462
DYS452
DYS445
Y-GATA-A10
DYS463
DYS441
Y-GGAAT-1B07
DYS525
DYS712
DYS593
DYS650
DYS532
DYS715
DYS504
DYS513
DYS561
DYS552
DYS726
DYS635
DYS587
DYS643
DYS497
DYS510
DYS434
DYS461
DYS435
P312/S1161324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123315916122626191211131210912121011113012132413101020151913241712152412231810141791211
L21/S1451324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123515916122526191211131211912121011113012132413101020151913241712152412231810141791211
Donaldson1323141111-12121213131429179-1011112515183015-16-16-17111119-231716181639-40121211915-1681010810101221-231610121216812252113121113111112123515916122426191211121211912121011113012132413101023152013241713152412231810141791211

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 0S0X3*16000000100000008300000
Used in age calculations16000000100000008300000
Counts of SNPs87
Variant counts last updated 2018-01-20 16:29:47.

* BED data not available. Using default values.


Big Tree Main Page