Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > M222 > DF106 > DF104 > DF105 > A259 > Y19870 > FGC5939

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
207196
FGC-BigY
BMTAB
22817885-G-A 20655999-G-A BY20588 YY+**
23730895-C-CA 21569009-C-CA Y576 9×A+**
9087246-A-G 9249637-A-G FGC36497 Y++
18028755-A-G 15916875-A-G L786 Y+**
9200888-A-C 9363279-A-C BY20586 Y+***
16692154-G-T 14580274-G-T FGC36498 YY++
21858579-G-C 19696693-G-C FGC36499 YY++
22249533-C-A 20087647-C-A DYZ19 +***
22540882-G-T 20378996-G-T BY20587 Y+**
23157943-G-A 20996057-G-A FGC36501 Y++
17313380-C-A 15201500-C-A **
23205017-C-A 21043131-C-A **
17482426-T-TG 15370546-T-TG **
22193085-C-T 20031199-C-T Y4027 FGC3948 **
17482422-A-C 15370542-A-C **
22221899-T-A 20060013-T-A DYZ19 *****
8988684-C-A 9151075-C-A **
8181442-G-A 8313401-G-A **
22219821-C-G 20057935-C-G DYZ19 *****
14142124-G-A 12021418-G-A *****
7438521-G-T 7570480-G-T **
10023763-T-G 10186154-T-G **
8399151-C-A 8531110-C-A **
14459934-C-A 12339207-C-A **
14216376-T-C 12095670-T-C **
5200190-C-A 5332149-C-A **
24517999-C-A 22371852-C-A **
6771489-A-T 6903448-A-T **
15786092-T-G 13674212-T-G **
8095260-TAC-T 8227219-TAC-T **
8237322-A-ATGC 8369281-A-ATGC **
23625375-C-A 21463489-C-A **
16021162-C-A 13909282-C-A **
5204514-G-A 5336473-G-A **
13440828-C-A 11285152-C-A **
8160162-C-A 8292121-C-A **
7524600-G-C 7656559-G-C **
4279807-C-A 4411766-C-A **
14638993-C-A 12527062-C-A **
16620439-C-A 14508559-C-A **
28467368-G-T 26321221-G-T **
16688454-C-A 14576574-C-A **
2847102-C-G 2979061-C-G **
8095284-C-T 8227243-C-T **
8095292-A-G 8227251-A-G **
14228888-C-A 12108182-C-A **
15290293-C-A 13178392-C-A **
18094245-G-T 15982365-G-T Y101261 **
21416647-C-A 19254761-C-A **
9940641-C-T 10103032-C-T **
19465939-A-G 17354059-A-G **
19449080-C-A 17337200-C-A **
13225948-C-A 11070272-C-A **
13489727-C-T 11334051-C-T **
13642831-C-A 11487155-C-A **
21068275-G-T 18906389-G-T **
18195204-C-G 16083324-C-G **
18650689-C-A 16538809-C-A **
7103038-TAC-T 7234997-TAC-T 17×AC**
9932101-C-A 10094492-C-A **
14180664-C-A 12059958-C-A **
21775011-G-T 19613125-G-T **
21709307-C-A 19547421-C-A **
9461406-C-A 9623797-C-A **
21954550-C-A 19792664-C-A **
18247338-C-T 16135458-C-T MF4837 **
25439685-C-A 23293538-C-A P2_r2 ***
26046002-C-T 23899855-C-T P1_Y1 13×T***
24695520-A-C 22549373-A-C P3_b2 ***
24718869-C-A 22572722-C-A P3_b2 ***
26147089-T-G 24000942-T-G P1_Y1 ***
24760651-G-A 22614504-G-A P3_b2 ***
24718880-C-A 22572733-C-A P3_b2 ***
24719653-C-A 22573506-C-A P3_b2 ***
24723460-G-T 22577313-G-T P3_b2 ***
26275829-G-A 24129682-G-A P1_Y1 ***
25896994-T-G 23750847-T-G P1_Y1 ***
24761115-C-A 22614968-C-A P3_b2 ***
24677562-A-G 22531415-A-G P3_b2 ***
24673383-C-T 22527236-C-T P3_b2 ***
24673400-A-C 22527253-A-C P3_b2 ***
25427340-A-C 23281193-A-C P2_r2 ***
24421925-C-A 22275778-C-A ***
24470722-C-A 22324575-C-A ***
24502305-G-T 22356158-G-T ***
24553287-G-A 22407140-G-A P3_t2 ***
24553288-T-G 22407141-T-G P3_t2 ***
24643210-C-T 22497063-C-T P3_t2 ***
26440416-T-A 24294269-T-A P1_Y1 ***
26283209-C-A 24137062-C-A P1_Y1 21×A***
26344140-G-A 24197993-G-A P1_Y1 ***
26341194-C-A 24195047-C-A P1_Y1 ***
24658495-C-T 22512348-C-T P3_b2 ***
26283251-C-T 24137104-C-T P1_Y1 ***
24672697-C-A 22526550-C-A P3_b2 ***
24795822-A-G 22649675-A-G P3_b2 ***
24794523-T-G 22648376-T-G P3_b2 ***
25709540-C-T 23563393-C-T P1_b3 ***
24868664-G-T 22722517-G-T P3_b2 ***
25502354-T-A 23356207-T-A P1_gr1 ***
25438321-G-T 23292174-G-T P2_r2 ***
25417467-A-G 23271320-A-G P2_r2 ***
25417479-A-T 23271332-A-T P2_r2 ***
24233657-G-T 22087510-G-T P3_b1 ***
25465295-G-T 23319148-G-T P2_r2 ***
25417441-G-A 23271294-G-A P2_r2 ***
25356980-A-C 23210833-A-C P2_r2 ***
25469014-A-G 23322867-A-G P2_r2 ***
25256636-G-T 23110489-G-T P2_r1 15×T***
25489676-T-G 23343529-T-G P2_r2 ***
25246434-T-C 23100287-T-C P2_r1 ***
25491420-T-G 23345273-T-G P2_r2 ***
25200631-A-C 23054484-A-C g1 ***
25422189-C-T 23276042-C-T A3557 P2_r2 ***
25104198-C-A 22958051-C-A g1 ***
25447211-A-G 23301064-A-G P2_r2 ***
25684243-C-A 23538096-C-A P1_b3 ***
24876215-C-A 22730068-C-A g1 ***
24885988-C-A 22739841-C-A g1 ***
25709539-A-T 23563392-A-T P1_b3 ***
25699403-T-A 23553256-T-A P1_b3 ***
25428305-A-G 23282158-A-G P2_r2 ***
24890211-A-C 22744064-A-C g1 ***
25660625-G-T 23514478-G-T P1_b3 ***
25427321-A-G 23281174-A-G P2_r2 ***
25631142-G-T 23484995-G-T P1_b3 ***
24987792-A-C 22841645-A-C g1 ***
25592747-T-G 23446600-T-G P1_gr1 ***
25078333-A-C 22932186-A-C g1 ***
25513301-T-A 23367154-T-A P1_gr1 ***
25103767-T-C 22957620-T-C g1 ***
22300841-G-A 20138955-G-A DYZ19 ***
23185882-T-G 21023996-T-G ***
24036260-C-A 21890113-C-A ***
21915723-G-T 19753837-G-T ***
21164655-G-T 19002769-G-T ***
21211765-C-A 19049879-C-A ***
21346320-C-A 19184434-C-A ***
21381521-A-G 19219635-A-G ***
21514123-G-T 19352237-G-T FGC59542 ***
21651158-T-C 19489272-T-C ***
21677524-C-A 19515638-C-A ***
21694897-T-G 19533011-T-G ***
22041006-T-A 19879120-T-A ***
21013146-A-G 18851260-A-G P4_Dst ***
22041008-C-G 19879122-C-G ***
22079768-G-T 19917882-G-T ***
22079796-A-C 19917910-A-C ***
22135510-A-G 19973624-A-G ***
22135600-C-A 19973714-C-A ***
22199494-G-T 20037608-G-T ***
22205383-C-A 20043497-C-A ***
22205545-T-G 20043659-T-G ***
21153797-C-A 18991911-C-A ***
21013122-T-G 18851236-T-G P4_Dst ***
22248408-T-C 20086522-T-C DYZ19 ***
20654071-C-A 18492185-C-A P4_Prx ***
19772486-T-G 17660606-T-G P5_Prx ***
19892964-C-T 17781084-C-T P5_Prx ***
19989751-T-A 17877871-T-A P5_Prx ***
20134588-C-G 18022708-C-G P5_Dst ***
20211813-A-T 18049927-A-T P5_Dst ***
20253924-C-T 18092038-C-T P5_Dst ***
20430889-G-T 18269003-G-T P5_Dst ***
20535848-A-G 18373962-A-G P5_Dst ***
20716961-T-A 18555075-T-A P4_Prx ***
20998252-G-A 18836366-G-A P4_Dst ***
20739009-C-A 18577123-C-A P4_Prx ***
20809706-C-A 18647820-C-A P4_Gap ***
20897537-C-A 18735651-C-A P4_Dst ***
20933477-G-T 18771591-G-T P4_Dst ***
20947350-T-A 18785464-T-A P4_Dst ***
20970373-C-A 18808487-C-A P4_Dst ***
20982336-T-G 18820450-T-G P4_Dst ***
20989214-G-T 18827328-G-T P4_Dst ***
22222734-A-T 20060848-A-T DYZ19 ***
22250184-T-A 20088298-T-A A3962 DYZ19 ***
24035043-G-T 21888896-G-T ***
23465946-T-G 21304060-T-G ***
22798075-G-T 20636189-G-T ***
22801545-G-T 20639659-G-T ***
22903609-C-A 20741723-C-A ***
23041099-G-T 20879213-G-T ***
23049640-A-G 20887754-A-G ***
23264128-C-A 21102242-C-A ***
23401439-C-A 21239553-C-A ***
23411427-T-G 21249541-T-G ***
23472088-C-A 21310202-C-A ***
22629737-C-A 20467851-C-A ***
23703039-A-C 21541153-A-C ***
23732079-A-G 21570193-A-G ***
23745367-G-T 21583481-G-T ***
23807462-C-A 21645576-C-A ***
23875232-C-A 21713346-C-A ***
23965930-C-A 21819783-C-A ***
24026744-G-T 21880597-G-T ***
24033072-C-T 21886925-C-T ***
22768181-C-A 20606295-C-A ***
22624528-C-A 20462642-C-A ***
22266144-C-T 20104258-C-T DYZ19 ***
22360219-G-A 20198333-G-A DYZ19 ***
22294453-G-T 20132567-G-T DYZ19 ***
22306789-T-C 20144903-T-C DYZ19 ***
22309923-T-C 20148037-T-C DYZ19 ***
22317634-C-G 20155748-C-G A17963 DYZ19 ***
22327662-T-A 20165776-T-A DYZ19 ***
22341600-C-A 20179714-C-A DYZ19 ***
22341607-A-T 20179721-A-T DYZ19 ***
22358169-G-T 20196283-G-T DYZ19 ***
22452363-G-T 20290477-G-T DYZ19 ***
22529533-T-G 20367647-T-G ***
22470484-C-A 20308598-C-A DYZ19 ***
22473036-A-G 20311150-A-G DYZ19 ***
22490179-T-G 20328293-T-G DYZ19 ***
22529509-T-C 20367623-T-C ***
22529511-C-G 20367625-C-G ***
22529513-T-C 20367627-T-C ***
22529521-A-G 20367635-A-G ***
22529530-G-A 20367644-G-A ***
26463168-C-T 24317021-C-T P1_Y1 ***
26991245-G-A 24845098-G-A P1_r4 ***
26529444-A-T 24383297-A-T P1_g2 ***
18806044-CTTTTTTT-C 16694164-CTTTTTTT-C 19×T***
13859832-TTA-CTG 11739126-TTA-CTG ***
13867011-TCTGGAAT-ATTGAAC 11746305-TCTGGAAT-ATTGAAC ***
14471469-CTTT-C 12350738-CTTT-C 19×T***
14819044-TTTG-T 12707111-C-CT ***
14960052-AC-A 12848127-AC-A ***
14960069-AT-CC 12848144-AT-CC ***
16651433-CTTTTTTTT-C 14539553-CTTTTTTTT-C 16×T***
18369777-TGGGC-GGGGG 16257897-TGGGC-GGGGG P6_Prx ***
19682115-TGAGT-AGAGA 17570235-TGAGT-AGAGA P5_Prx ***
13858727-ATCGACTG-TTA 11738021-ATCGACTG-TTA ***
19857576-CAA-C 17745696-CAA-C P5_Prx 15×A***
20084453-TTTC-T 17972573-TTTC-T P5_Dst ***
20087764-GAAA-G 17975884-GAAA-G P5_Dst 13×A***
20194043-ACAGAAAATTTCCACTTTCAATAAT-A 18032157-ACAGAAAATTTCCACTTTCAATAAT-A P5_Dst ***
20243496-A-AAGACAG 18081610-A-AAGACAG P5_Dst ***
20386768-GAA-G 18224882-GAA-G P5_Dst 15×A***
20420418-G-GGC 18258532-G-GGC P5_Dst ***
22258239-GCTC-CATA 20096353-GCTC-CATA DYZ19 ***
13859374-GG-CA 11738668-GG-CA ***
13858689-TGAATGG-CGTATGA 11737983-TGAATGG-CGTATGA ***
22311597-ATA-T 20149711-ATA-T DYZ19 ***
13740782-GGAATGGATTGGAATA-G 11585106-GGAATGGATTGGAATA-G ***
10023749-GTGCTTG-CTGCCTA 10186140-GTGCTTG-CTGCCTA ***
13140531-TT-AC 10630017-TT-AC ***
13141762-GCCATT-G 10631248-GCCATT-G 11×CCATT***
13196436-CC-AT 11040760-CC-AT ***
13461081-GAGT-TAGC 11305405-GAGT-TAGC ***
13474007-ACGTA-GGGTT 11318331-ACGTA-GGGTT ***
13474044-TCA-CCT 11318368-TCA-CCT ***
13488792-CCCG-GCGT 11333116-CCCG-GCGT ***
13745438-TA-AG 11589762-TA-AG ***
13857834-TGGGCTCG-CAGGCTCA 11737128-TGGGCTCG-CAGGCTCA ***
13799078-CT-AA 11678372-CT-AA ***
13809728-AT-GG 11689022-AT-GG ***
13809768-GGAG-CGAA 11689062-GGAG-CGAA ***
13809794-AAGTG-GAGTA 11689088-AAGTG-GAGTA ***
13835287-ATG-TTA 11714581-ATG-TTA ***
13841390-AAATG-GAATC 11720684-AAATG-GAATC ***
13857606-GACTT-TACTC 11736900-GACTT-TACTC ***
13857660-TTC-GGT 11736954-TTC-GGT ***
13857674-TGTAT-CGTAA 11736968-TGTAT-CGTAA ***
22301626-TATG-GATT 20139740-TATG-GATT DYZ19 ***
22325261-TCAC-ACAG 20163375-TCAC-ACAG DYZ19 ***
10016081-AA-C 10178472-AA-C ***
28086347-AT-A 25940200-AT-A P1_Y2 ***
27275611-A-ACTGT 25129464-A-ACTGT P1_g3 ***
27313118-A-AT 25166971-A-AT P1_g3 9×T***
27375800-A-AT 25229653-A-AT P1_g3 19×T***
27423019-CT-C 25276872-CT-C P1_g3 ***
27717576-AAAC-A 25571429-AAAC-A P1_Y2 5×AAC***
27963480-C-CA 25817333-C-CA P1_Y2 11×A***
27964040-GT-G 25817893-GT-G P1_Y2 ***
27981744-A-AT 25835597-A-AT P1_Y2 10×T***
28160822-CT-C 26014675-CT-C P1_b4 22×T***
27152434-CT-C 25006287-CT-C P1_g3 ***
28360493-A-AT 26214346-A-AT P1_gr2 ***
28707806-GT-G 26561659-GT-G 8×T***
58827280-CAATT-TAATA 56763587-AATTG-TATTA ***
58978993-G-CTCCATTCCAC 56832846-G-CTCCATTCCAC ***
58979342-CTA-C 56833195-CTA-C ***
58986189-CT-GC 56840042-CT-GC ***
59008782-T-TG 56862635-T-TG ***
59030570-T-TAATATAA 56884423-T-TAATATAA ***
13826145-A-AGGAATGGAAT 11705439-A-AGGAATGGAAT 10×GGAAT***
27160261-CT-C 25014114-CT-C P1_g3 ***
27148404-TTTTTACC-T 25002257-TTTTTACC-T P1_g3 ***
22325282-GG-AT 20163396-GG-AT DYZ19 ***
24837250-GT-G 22691103-GT-G P3_b2 17×T***
23114014-AATATATAT-A 20952128-AATATATAT-A 22×AT***
24029677-CCAATACATGACTAACTTACAACTTAAA-C 21883530-CCAATACATGACTAACTTACAACTTAAA-C ***
24044810-T-TTCTG 21898663-T-TTCTG ***
24270917-AT-A 22124770-AT-A P3_b1 19×T***
24673369-TA-T 22527222-TA-T P3_b2 10×A***
24681972-CA-C 22535825-CA-C P3_b2 ***
24736119-C-CA 22589972-C-CA P3_b2 11×A***
24763477-T-TTG 22617330-T-TTG P3_b2 19×TG***
25368167-T-TTCTG 23222020-T-TTCTG P2_r2 ***
27082211-AG-A 24936064-AG-A P1_r4 ***
25402857-CT-C 23256710-CT-C P2_r2 20×T***
25427336-T-TTCTG 23281189-T-TTCTG P2_r2 ***
25443656-ATTTTTCCCTGTTCAGTATGATGTTGGTTG-A 23297509-ATTTTTCCCTGTTCAGTATGATGTTGGTTG-A P2_r2 ***
26197268-G-GT 24051121-G-GT P1_Y1 11×T***
26283226-AAAAAG-A 24137079-AAAAAG-A P1_Y1 ***
26344165-GAAC-TAAA 24198018-GAAC-TAAA P1_Y1 ***
26529450-CTT-C 24383303-CTT-C P1_g2 16×T***
26992907-GTT-G 24846760-GTT-G P1_r4 24×T***
27016312-TA-T 24870165-TA-T P1_r4 ***
10023666-T-TTCTC 10186057-T-TTCTC ***
9985945-CGAGT-TGAGA 10148336-CGAGT-TGAGA ***
26543086-A-G 24396939-A-G P1_g2 ***
27313777-C-A 25167630-C-A P1_g3 ***
27130489-G-T 24984342-G-T P1_g3 ***
27134979-T-C 24988832-T-C P1_g3 ***
27149091-T-A 25002944-T-A P1_g3 ***
27151035-C-A 25004888-C-A P1_g3 ***
27151197-C-G 25005050-C-G P1_g3 ***
27184853-G-A 25038706-G-A P1_g3 ***
27265878-A-T 25119731-A-T P1_g3 ***
27299373-A-C 25153226-A-C P1_g3 ***
27330106-G-T 25183959-G-T P1_g3 ***
27080563-G-T 24934416-G-T P1_r4 ***
27339871-G-T 25193724-G-T P1_g3 ***
27359752-A-T 25213605-A-T P1_g3 ***
27375797-A-T 25229650-A-T P1_g3 ***
27638400-A-C 25492253-A-C P1_Y2 ***
27729474-A-G 25583327-A-G P1_Y2 ***
27733600-C-A 25587453-C-A P1_Y2 ***
27780493-A-T 25634346-A-T P1_Y2 ***
27841119-T-C 25694972-T-C P1_Y2 ***
27130403-T-G 24984256-T-G P1_g3 ***
27062911-G-T 24916764-G-T P1_r4 ***
27867009-G-T 25720862-G-T P1_Y2 ***
26900200-T-A 24754053-T-A P1_r3 ***
26547268-T-G 24401121-T-G P1_g2 ***
26780844-C-A 24634697-C-A P1_g2 ***
26809317-T-G 24663170-T-G P1_g2 ***
26874010-A-G 24727863-A-G P1_r3 ***
26874035-G-T 24727888-G-T P1_r3 ***
26874036-T-G 24727889-T-G P1_r3 ***
26880333-A-G 24734186-A-G P1_r3 ***
26900194-G-A 24754047-G-A P1_r3 ***
26900210-C-T 24754063-C-T P1_r3 ***
27056841-G-T 24910694-G-T P1_r4 ***
26902792-A-G 24756645-A-G P1_r3 ***
26928106-G-T 24781959-G-T P1_r3 ***
26991224-G-A 24845077-G-A P1_r4 ***
26991227-T-A 24845080-T-A P1_r4 ***
19649783-T-C 17537903-T-C P5_Prx ***
26991264-G-A 24845117-G-A P1_r4 ***
27011417-C-T 24865270-C-T P1_r4 12×T***
27016181-G-A 24870034-G-A P1_r4 ***
27016317-G-A 24870170-G-A P1_r4 ***
27861129-C-T 25714982-C-T P1_Y2 ***
27937827-A-C 25791680-A-C P1_Y2 ***
9944736-CCCAG-TCCAA 10107127-CCCAG-TCCAA ***
58997011-T-G 56850864-T-G ***
58989963-C-T 56843816-C-T ***
58989990-A-G 56843843-A-G ***
58990088-C-A 56843941-C-A ***
58996588-A-C 56850441-A-C ***
58996947-G-C 56850800-G-C ***
58996957-T-C 56850810-T-C ***
58996962-A-G 56850815-A-G ***
58996996-C-T 56850849-C-T ***
13488730-ACCG-GCCA 11333054-ACCG-GCCA ***
58986184-C-A 56840037-C-A ***
13461089-TC-AG 11305413-TC-AG ***
58990081-AT-GG 56843934-AT-GG ***
22268251-CTT-GTC 20106365-CTT-GTC DYZ19 ***
17632593-A-TT 15520713-A-TT ***
6863818-CTTTTTTT-C 6995777-CTTTTTTT-C 21×T***
7196046-CTTTTT-C 7328005-CTTTTT-C 16×T***
9930054-AA-TG 10092445-AA-TG ***
9944061-TAG-GAT 10106452-TAG-GAT ***
9944146-CA-TG 10106537-CA-TG ***
58988604-T-C 56842457-T-C ***
58985029-C-T 56838882-C-T ***
28031764-T-C 25885617-T-C P1_Y2 ***
28624544-C-A 26478397-C-A ***
28160848-C-T 26014701-C-T P1_b4 ***
28170285-A-C 26024138-A-C P1_b4 ***
28236557-G-T 26090410-G-T P1_b4 ***
28478809-C-A 26332662-C-A ***
28544470-G-T 26398323-G-T ***
28545811-C-A 26399664-C-A ***
28556236-T-G 26410089-T-G ***
28605796-C-A 26459649-C-A ***
28687963-C-A 26541816-C-A ***
58905397-A-C 56685474-T-G ***
28703328-C-T 26557181-C-T ***
28767773-T-G 26621626-T-G ***
28780171-A-G 26634024-A-G ***
28806428-A-T 26660281-A-T ***
28813728-G-T 26667581-G-T ***
58827401-T-C 56763470-A-G ***
58840925-C-A 56749946-G-T ***
58848272-G-A 56742599-C-T ***
58858934-C-T 56731937-G-A ***
19749309-C-T 17637429-C-T P5_Prx 22×T***
18857733-C-A 16745853-C-A ***
19631020-G-T 17519140-G-T P5_Prx ***
7224884-T-C 7356843-T-C ***
7098157-T-G 7230116-T-G ***
7108508-G-T 7240467-G-T ***
7171953-C-T 7303912-C-T ***
7200069-T-C 7332028-T-C ***
7209915-A-C 7341874-A-C ***
7217293-T-C 7349252-T-C ***
7217294-G-T 7349253-G-T ***
7234819-G-A 7366778-G-A ***
7028793-G-T 7160752-G-T ***
7242725-C-A 7374684-C-A b38:8746360-A-G ***
7282381-G-C 7414340-G-C ***
7282383-T-C 7414342-T-C ***
7282384-G-A 7414343-G-A ***
7363147-A-G 7495106-A-G ***
7499721-G-T 7631680-G-T IR1_L ***
7608436-C-T 7740395-C-T S10396 15×CT***
7636509-C-A 7768468-C-A ***
7076351-C-A 7208310-C-A ***
7013631-G-T 7145590-G-T ***
7699861-A-G 7831820-A-G ***
6493508-C-A 6625467-C-A ***
4889516-C-A 5021475-C-A ***
4957647-C-A 5089606-C-A ***
5204487-T-A 5336446-T-A ***
5495120-A-T 5627079-A-T ***
5690577-T-G 5822536-T-G ***
6062782-G-T 6194741-G-T ***
6105245-C-A 6237204-C-A ***
6367393-G-T 6499352-G-T ***
6619534-C-A 6751493-C-A ***
6953355-C-A 7085314-C-A ***
6666229-C-A 6798188-C-A ***
6749669-T-G 6881628-T-G ***
6756059-A-G 6888018-A-G ***
6822569-C-A 6954528-C-A ***
6839668-A-G 6971627-A-G ***
6854318-A-C 6986277-A-C ***
6917006-C-A 7048965-C-A ***
6945866-C-A 7077825-C-A ***
7646620-A-G 7778579-A-G ***
7723537-A-C 7855496-A-C ***
4425438-T-G 4557397-T-G ***
9627417-G-T 9789808-G-T IR3_Prx ***
9318546-T-C 9480937-T-C ***
9343806-G-C 9506197-G-C ***
9353744-G-C 9516135-G-C ***
9524434-G-T 9686825-G-T ***
9529206-C-G 9691597-C-G IR3_Prx ***
9602721-A-T 9765112-A-T IR3_Prx ***
9605319-T-A 9767710-T-A IR3_Prx ***
9605690-C-A 9768081-C-A IR3_Prx ***
9769065-C-A 9931456-C-A ***
9222809-C-T 9385200-C-T ***
9769066-T-C 9931457-T-C ***
9769077-A-C 9931468-A-C ***
9803917-T-C 9966308-T-C ***
9907450-G-T 10069841-G-T ***
9927295-A-C 10089686-A-C ***
9927317-A-C 10089708-A-C ***
9930046-G-A 10092437-G-A ***
9944762-C-T 10107153-C-T ***
9235818-A-G 9398209-A-G ***
9111609-C-T 9274000-C-T ***
7723539-T-C 7855498-T-C ***
8276198-C-A 8408157-C-A ***
7723540-G-A 7855499-G-A ***
7756276-C-A 7888235-C-A ***
7776539-C-A 7908498-C-A ***
7898762-G-T 8030721-G-T ***
8079605-C-A 8211564-C-A ***
8095266-C-T 8227225-C-T ***
8110004-T-G 8241963-T-G ***
8178947-C-A 8310906-C-A ***
8407304-C-A 8539263-C-A ***
9055613-T-A 9218004-T-A ***
8799657-A-T 8931616-A-T ***
8806927-C-A 8938886-C-A ***
8848325-G-T 8980284-G-T ***
8911767-G-T 9043726-G-T ***
9025145-C-G 9187536-C-G FGC38889 ***
9040824-T-C 9203215-T-C ***
9040921-A-T 9203312-A-T ***
9046901-C-A 9209292-C-A ***
4665830-A-G 4797789-A-G ***
4282482-C-A 4414441-C-A ***
9952147-C-A 10114538-C-A ***
27033094-CC-TT 24886947-CC-TT P1_r4 ***
13962138-A-T 11841432-A-T ***
20845485-T-A 18683599-T-A P4_Dst ***
24655973-T-G 22509826-T-G P3_b2 ***
25466467-T-A 23320320-T-A P2_r2 ***
26538295-C-T 24392148-C-T P1_g2 ***
13866779-AG-CA 11746073-AG-CA ***
13799090-CA-TG 11678384-CA-TG ***
58976804-TTCCACTG-CTCCACTT 56830657-TTCCACTG-CTCCACTT ***
22317240-T-G 20155354-T-G DYZ19 ***
9930146-C-A 10092537-C-A ***
10068734-A-G 10231125-A-G ***
13196396-A-G 11040720-A-G ***
22301071-A-C 20139185-A-C DYZ19 ***
59030475-C-CAAAA 56884328-C-CAAAA ***
19682103-T-A 17570223-T-A P5_Prx ***
22248403-C-T 20086517-C-T DYZ19 ***
26440434-C-T 24294287-C-T P1_Y1 ***
10023774-T-TCC 10186165-T-TCC ***
13706115-TATGG-T 11550439-TATGG-T 4×ATGGA***
22300778-GGC-AGT 20138892-GGC-AGT DYZ19 ***
58858812-C-T 56732059-G-A ***
22224676-T-C 20062790-T-C DYZ19 ***
13743812-T-A 11588136-T-A ***
26141303-GC-G 23995156-GC-G P1_Y1 11×C***
28103949-CT-C 25957802-CT-C P1_Y2 22×T***
22224654-T-G 20062768-T-G DYZ19 ***
22422606-C-A 20260720-C-A DYZ19 ***
17426011-C-CCTTTTCTTTT 15314131-C-CCTTTTCTTTT 11×CTTTT***
10023749-G-C 10186140-G-C ***
13474008-C-G,T 11318332-C-G,T ***
17114685-TAC-T 15002805-TAC-T 19×AC***
10023755-G-A 10186146-G-A ***
13505201-T-G 11349525-T-G ***
9519812-TTTTCTTTCTTTCTTTC-T 9682203-TTTTCTTTCTTTCTTTC-T 17×TTTC***
22224731-C-T 20062845-C-T DYZ19 ***
59030571-TTTAT-AATATA 56884424-TTTAT-AATATA ***
28556230-T-G 26410083-T-G ***
27335305-AAAAT-A 25189158-AAAAT-A P1_g3 5×AAAT***
22368407-T-A 20206521-T-A DYZ19 ***
26880358-A-T 24734211-A-T P1_r3 ***
22300832-AGG-GGT 20138946-AGG-GGT DYZ19 ***
4217624-T-A 4349583-T-A ***
3032666-C-A 3164625-C-A ***
13860194-C-A 11739488-C-A ***
5865287-G-A 5997246-G-A ***
2762111-G-T 2894070-G-T ***
2762115-G-T 2894074-G-T ***
2773507-A-C 2905466-A-C ***
2881324-G-T 3013283-G-T ***
2882581-C-A 3014540-C-A ***
2905926-C-A 3037885-C-A ***
3032870-C-A 3164829-C-A ***
58988613-T-C 56842466-T-C ***
3274256-C-A 3406215-C-A ***
3330495-C-A 3462454-C-A ***
3343220-A-G 3475179-A-G ***
3385577-C-A 3517536-C-A ***
3389890-C-A 3521849-C-A ***
3544885-C-A 3676844-C-A ***
4101121-C-A 4233080-C-A ***
4215595-C-T 4347554-C-T ***
24450500-G-A 22304353-G-A ***
19479757-C-A 17367877-C-A V4159 ***
58975737-CCAT-ACAC 56829590-CCAT-ACAC ***
24831481-A-G 22685334-A-G P3_b2 ***
9602730-T-G 9765121-T-G IR3_Prx ***
26991241-G-T 24845094-G-T P1_r4 ***
13712739-G-C 11557063-G-C ***
13505190-G-T 11349514-G-T ***
13505192-C-T 11349516-C-T ***
13688382-C-A 11532706-C-A ***
22317328-G-C 20155442-G-C DYZ19 ***
24259529-G-A 22113382-G-A P3_b1 ***
10068695-AAGTTTC-TAGGTTA 10231086-AAGTTTC-TAGGTTA ***
24421903-C-A 22275756-C-A ***
9930134-G-A 10092525-G-A ***
9940681-G-A 10103072-G-A ***
9944749-T-C 10107140-T-C ***
10056876-C-T 10219267-C-T ***
22360187-C-T 20198301-C-T DYZ19 ***
22429825-C-A 20267939-C-A DYZ19 ***
58976126-A-G 56829979-A-G ***
10065357-A-C 10227748-A-C ***
9950974-C-T 10113365-C-T ***
9993528-G-T 10155919-G-T ***
19591323-G-T 17479443-G-T P5_Prx ***
17215822-C-A 15103942-C-A ***
16906865-A-C 14794985-A-C ***
16909248-C-A 14797368-C-A ***
17058662-A-C 14946782-A-C ***
17085878-C-A 14973998-C-A ***
17090734-T-C 14978854-T-C ***
17100321-C-A 14988441-C-A ***
17206667-C-A 15094787-C-A ***
17342932-C-A 15231052-C-A ***
16833433-G-T 14721553-G-T ***
17363140-C-A 15251260-C-A ***
17385614-T-A 15273734-T-A ***
17482427-T-C 15370547-T-C ***
17503936-C-A 15392056-C-A ***
17544723-C-A 15432843-C-A ***
17584196-T-G 15472316-T-G ***
17589157-G-T 15477277-G-T ***
17597763-C-A 15485883-C-A ***
16906858-G-T 14794978-G-T ***
16705518-C-A 14593638-C-A ***
17666619-C-A 15554739-C-A ***
16320479-C-A 14208599-C-A ***
15963924-C-A 13852044-C-A ***
16038965-C-A 13927085-C-A ***
16042850-C-A 13930970-C-A ***
16056233-G-A 13944353-G-A ***
16104472-A-T 13992592-A-T P8_Prx ***
16184306-C-A 14072426-C-A ***
16245028-C-A 14133148-C-A ***
16320469-C-A 14208589-C-A ***
16336057-A-G 14224177-A-G ***
16651918-A-C 14540038-A-C ***
16438029-C-A 14326149-C-A ***
16462719-A-C 14350839-A-C ***
16464466-C-A 14352586-C-A ***
16474633-T-C 14362753-T-C ***
16475280-G-T 14363400-G-T ***
16488019-C-G 14376139-C-G ***
16516326-C-A 14404446-C-A ***
16581275-C-A 14469395-C-A ***
17666593-A-T 15554713-A-T ***
17739740-C-A 15627860-C-A ***
15734253-C-A 13622373-C-A ***
19161077-C-A 17049197-C-A ***
18956222-A-G 16844342-A-G ***
19007783-C-A 16895903-C-A ***
19043470-C-A 16931590-C-A ***
19071793-C-A 16959913-C-A ***
19075591-C-A 16963711-C-A ***
19126405-G-A 17014525-G-A ***
19126417-G-A 17014537-G-A ***
19132538-C-A 17020658-C-A ***
19168485-C-A 17056605-C-A ***
18933857-T-C 16821977-T-C ***
19184016-T-G 17072136-T-G ***
19201087-C-A 17089207-C-A ***
19202750-G-A 17090870-G-A ***
19202751-C-T 17090871-C-T ***
19202758-A-T 17090878-A-T ***
19300239-C-T 17188359-C-T ***
19410150-C-A 17298270-C-A ***
19583796-A-C 17471916-A-C P5_Prx ***
18956190-C-A 16844310-C-A ***
18906238-T-A 16794358-T-A ***
17850016-T-G 15738136-T-G ***
18390021-C-T 16278141-C-T P6_Gap ***
17913039-C-A 15801159-C-A ***
17920931-G-A 15809051-G-A ***
18020813-C-A 15908933-C-A ***
18191308-C-A 16079428-C-A ***
18255932-C-A 16144052-C-A ***
18270175-C-A 16158295-C-A ***
18321367-A-T 16209487-A-T P6_Prx ***
18370937-C-G 16259057-C-G P6_Prx ***
18480095-G-A 16368215-G-A P6_Dst ***
18901039-C-A 16789159-C-A ***
18554433-C-A 16442553-C-A ***
18580546-G-T 16468666-G-T ***
18650710-C-A 16538830-C-A ***
18701720-C-A 16589840-C-A ***
18718805-C-A 16606925-C-A ***
18748787-C-A 16636907-C-A ***
18857791-G-T 16745911-G-T ***
18900636-C-A 16788756-C-A ***
15811358-A-G 13699478-A-G ***
15729158-G-T 13617278-G-T ***
10024321-C-A 10186712-C-A ***
13895785-C-A 11775079-C-A ***
13723165-A-G 11567489-A-G ***
13723166-C-T 11567490-C-T ***
13723170-A-G 11567494-A-G ***
13735165-T-A 11579489-T-A ***
13739833-T-G 11584157-T-G ***
13809742-T-A 11689036-T-A ***
13809873-G-T 11689167-G-T ***
13881394-A-C 11760688-A-C ***
13900182-C-A 11779476-C-A ***
13486616-G-C 11330940-G-C ***
13927885-C-A 11807179-C-A ***
14048856-G-A 11928150-G-A ***
14101023-G-T 11980317-G-T ***
14196246-C-A 12075540-C-A ***
14225724-G-T 12105018-G-T ***
14257245-A-T 12136539-A-T ***
14293730-T-G 12173024-T-G ***
14297902-C-A 12177196-C-A ***
13723160-A-G 11567484-A-G ***
13485472-G-A 11329796-G-A ***
14325049-C-T 12204343-C-T ***
13429871-C-A 11274195-C-A ***
10056860-G-T 10219251-G-T ***
10091763-A-C 10254154-A-C Y89584 ***
10097080-C-A 10259471-C-A ***
13229686-C-A 11074010-C-A ***
13253987-C-A 11098311-C-A ***
13306061-C-A 11150385-C-A ***
13311762-C-A 11156086-C-A ***
13331195-C-A 11175519-C-A ***
13433737-G-A 11278061-G-A ***
13477799-G-A 11322123-G-A ***
13445995-G-C 11290319-G-C ***
13460150-T-C 11304474-T-C ***
13460948-T-A 11305272-T-A ***
13461230-T-A 11305554-T-A ***
13465533-A-G 11309857-A-G ***
13466163-C-A 11310487-C-A ***
13474788-T-A 11319112-T-A ***
13476912-C-A 11321236-C-A ***
14325040-C-T 12204334-C-T ***
14325050-A-C 12204344-A-C ***
15699825-G-T 13587945-G-T ***
15202270-T-C 13090356-T-C ***
14810900-C-A 12698971-C-A ***
14823537-A-T 12711604-A-T ***
14846878-C-A 12734944-C-A ***
14960069-A-C 12848144-A-C ***
14960070-T-C 12848145-T-C ***
15113638-C-A 13001725-C-A ***
15150944-G-T 13039031-G-T ***
15151395-T-C 13039482-T-C ***
15290083-C-A 13178182-C-A ***
14798676-C-A 12686747-C-A ***
15364546-C-A 13252666-C-A ***
15366092-G-T 13254212-G-T ***
15374472-T-C 13262592-T-C ***
15374474-C-T 13262594-C-T ***
15397839-G-A 13285959-G-A ***
15403512-C-A 13291632-C-A ***
15427475-C-A 13315595-C-A ***
15580065-T-A 13468185-T-A ***
14802959-G-A 12691030-G-A ***
14786483-C-A 12674553-C-A ***
14325052-G-A 12204346-G-A ***
14499411-A-G 12387616-A-G ***
14356649-C-A 12235944-C-A ***
14366293-A-C 12245588-A-C ***
14366429-C-A 12245724-C-A ***
14371288-C-A 12250584-C-A ***
14377913-C-A 12257209-C-A ***
14385323-C-A 12264619-C-A ***
14422827-C-A 12302102-C-A ***
14475971-G-T 12355240-G-T ***
14499414-T-C 12387619-T-C ***
14758053-C-A 12646122-C-A ***
14499417-T-C 12387622-T-C ***
14499418-G-T 12387623-G-T ***
14499429-G-T 12387634-G-T ***
14499440-T-G 12387645-T-G ***
14696020-A-T 12584086-A-T ***
14697038-A-G 12585104-A-G ***
14698396-T-A 12586462-T-A ***
14700172-G-A 12588238-G-A ***
14071354-CTTTTTTTTTTTTTTTTTT-C 11950648-CTTTTTTTTTTTTTTTTTT-C 25×T***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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