Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > ZZ12 > ZZ19 > Z34609 > Z2571 > FGC11380 > FGC11388 > BY21578

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
66501
BigY2
66501
26248367-T-TTC 24102220-T-TTC P1_Y1 15×TC***A*
22936288-C-T 20774402-C-T YY25×T+
7762123-G-GA 7894082-G-GA ++
15520285-C-T 13408405-C-T YY++
17860895-G-T 15749015-G-T PR6110 YY****
15592550-CAAAA-C 13480670-CAAAA-C 22×A*
25885800-A-AAAGG 23739653-A-AAAGG P1_Y1 ****
14076759-C-A 11956053-C-A **
14079782-T-C 11959076-T-C **
14081484-C-A 11960778-C-A **
14101028-C-T 11980322-C-T **
14098028-C-A 11977322-C-A **
14107805-C-A 11987099-C-A **
14146644-A-AT 12025938-A-AT **
14149081-C-A 12028375-C-A **
22703438-C-A 20541552-C-A 8×A**
22649600-C-A 20487714-C-A **
14177900-A-C 12057194-A-C **
14047362-C-A 11926656-C-A **
56847509-G-A **
14212015-G-A 12091309-G-A **
14039419-C-A 11918713-C-A **
14039284-C-A 11918578-C-A **
14030858-C-A 11910152-C-A **
14023048-A-G 11902342-A-G **
14021103-C-A 11900397-C-A **
13928850-C-A 11808144-C-A **
13928138-T-A 11807432-T-A **
13927232-C-G 11806526-C-G **
13925358-C-A 11804652-C-A **
13909323-T-A 11788617-T-A **
13871421-C-A 11750715-C-A **
13828272-G-T 11707566-G-T **
13799108-G-T 11678402-G-T **
11666189-A-C **
14187044-A-G 12066338-A-G **
22551470-C-A 20389584-C-A **
13671483-C-T 11515807-C-T **
14524076-A-C 12412277-A-C **
14495795-T-C 12383992-T-C **
14506086-C-A 12394291-C-A **
14506111-C-A 12394316-C-A **
14512455-G-T 12400660-G-T **
14514699-A-G 12402904-A-G **
14516843-C-T 12405044-C-T **
14539420-A-C 12427621-A-C **
14471705-C-A 12350974-C-A **
14544155-G-T 12432356-G-T **
22176155-C-A 20014269-C-A **
14567107-C-T 12455307-C-T **
14568216-G-T 12456416-G-T **
14575656-T-G 12463856-T-G **
14605771-G-T 12493973-G-T **
14492793-CTTTT-C 12380990-CTTTT-C 15×T**
22176322-C-A 20014436-C-A **
14226710-C-A 12106004-C-A **
14324375-T-A 12203669-T-A **
14297374-A-G 12176668-A-G **
14300542-G-C 12179836-G-C **
14324351-C-A 12203645-C-A **
14324353-C-T 12203647-C-T **
14324354-A-G 12203648-A-G **
14324363-T-C 12203657-T-C **
14324378-A-G 12203672-A-G **
14379387-G-T 12258683-G-T **
14324379-T-C 12203673-T-C **
14324381-CA-C 12203675-CA-C **
14324392-A-C 12203686-A-C **
14356537-C-T 12235832-C-T **
14358084-C-A 12237379-C-A **
14361907-G-A 12241202-G-A **
22241459-A-C 20079573-A-C DYZ19 **
13728612-C-A 11572936-C-A **
13522792-G-T 11367116-G-T **
22791021-G-T 20629135-G-T **
10658432-C-A **
10850074-T-C **
10850064-T-C **
10792725-CTCCATTCCATTCCATTCCATTCCATTCCATTCCAT-C **
22995075-T-C 20833189-T-C **
23052559-G-A 20890673-G-A **
23065505-G-T 20903619-G-T **
10776075-A-G **
10754982-C-G **
10754966-CC-TTTTG **
10754957-C-T **
10746903-C-A **
10671352-T-C **
23076324-A-C 20914438-A-C **
23104373-T-C 20942487-T-C **
10627737-C-A **
10850725-C-T **
10033815-C-A 10196206-C-A **
10012967-C-A 10175358-C-A **
10010543-G-T 10172934-G-T **
10004763-A-G 10167154-A-G **
9934173-C-A 10096564-C-A **
9931581-C-A 10093972-C-A **
9907232-C-A 10069623-C-A **
9877234-C-A 10039625-C-A **
9822694-A-C 9985085-A-C **
9804118-A-AT 9966509-A-AT 9×T**
9731846-T-G 9894237-T-G IR3_Prx **
9636622-G-GTT 9799013-G-GTT IR3_Prx **
9440281-C-A 9602672-C-A **
9386062-A-C 9548453-A-C **
10850077-T-C **
10859686-A-T **
13602637-C-A 11446961-C-A **
22951781-C-A 20789895-C-A **
13572421-C-A 11416745-C-A **
13565556-G-T 11409880-G-T **
22170999-A-G 20009113-A-G **
13518985-G-T 11363309-G-T **
13481446-T-C 11325770-T-C **
13476364-C-A 11320688-C-A **
22869601-T-C 20707715-T-C **
13463967-C-G 11308291-C-G **
22882204-A-C 20720318-A-C **
13457520-T-C 11301844-T-C **
22937420-A-C 20775534-A-C **
13402678-G-T 11247002-G-T **
22948305-C-A 20786419-C-A **
13308167-C-A 11152491-C-A **
13224626-C-A 11068950-C-A **
10879926-C-T **
22965214-C-A 20803328-C-A **
13209565-G-T 11053889-G-T **
13207050-G-T 11051374-G-T **
13201819-T-G 11046143-T-G **
13195797-A-T 11040121-A-T **
10967456-T-C **
10956342-T-A **
10945826-G-T **
10938295-T-C **
10926615-T-A **
10912396-C-G **
22993425-G-A 20831539-G-A **
10894269-TTTATC-T **
10880635-C-G **
14644978-C-A 12533047-C-A **
14926286-A-C 12814351-A-C **
14786512-T-A 12674582-T-A **
17854446-T-C 15742566-T-C **
18616013-T-G 16504133-T-G **
18549265-G-A 16437385-G-A **
18528143-G-T 16416263-G-T P6_Dst **
18382166-C-A 16270286-C-A P6_Gap **
18261782-C-A 16149902-C-A **
18253176-A-G 16141296-A-G **
18154498-C-A 16042618-C-A **
18136187-C-A 16024307-C-A **
18035914-T-G 15924034-T-G **
18008706-G-TT 15896826-G-TT P7_Dst **
17955854-C-A 15843974-C-A **
17951769-C-A 15839889-C-A **
17929059-G-T 15817179-G-T **
17923113-C-A 15811233-C-A **
17788804-A-G 15676924-A-G **
18646006-A-G 16534126-A-G **
17775003-A-C 15663123-A-C **
17752067-C-A 15640187-C-A **
17714657-C-A 15602777-C-A **
17702686-C-A 15590806-C-A **
17646773-G-T 15534893-G-T **
17616806-C-T 15504926-C-T **
17561531-G-T 15449651-G-T **
17537983-C-A 15426103-C-A **
17527295-C-A 15415415-C-A **
17428311-C-A 15316431-C-A **
21658461-A-T 19496575-A-T **
17387424-C-A 15275544-C-A **
17380465-C-A 15268585-C-A **
17376052-A-G 15264172-A-G **
18634760-A-G 16522880-A-G **
21639012-G-T 19477126-G-T **
17150085-T-C 15038205-T-C **
19249033-C-A 17137153-C-A **
21153403-C-T 18991517-C-T **
21132678-TGTG-T 18970792-TGTG-T **
21118549-A-C 18956663-A-C **
20829734-C-A 18667848-C-A P4_Gap **
21427099-C-A 19265213-C-A **
20640262-G-T 18478376-G-T P4_Prx **
20535143-T-C 18373257-T-C P5_Dst **
19517119-C-A 17405239-C-A **
19496398-T-G 17384518-T-G **
19412625-A-G 17300745-A-G **
19410058-G-T 17298178-G-T **
19339429-C-A 17227549-C-A **
19324168-A-G 17212288-A-G **
19311052-A-G 17199172-A-G **
19246178-C-A 17134298-C-A **
18717744-GAA-G 16605864-GAA-G 11×A**
19145628-C-A 17033748-C-A **
19075015-C-A 16963135-C-A **
19055500-C-T 16943620-C-T **
19043727-G-A 16931847-G-A **
19021557-C-A 16909677-C-A **
18931739-C-A 16819859-C-A **
18923341-T-TG 16811461-T-TG **
18863328-G-T 16751448-G-T **
18817875-A-T 16705995-A-T **
18812039-C-A 16700159-C-A **
18810705-C-A 16698825-C-A **
18756336-T-G 16644456-T-G **
21549227-T-A 19387341-T-A **
18740792-C-A 16628912-C-A **
17164121-C-A 15052241-C-A **
17130498-G-T 15018618-G-T **
14852937-C-A 12741003-C-A **
15346639-C-A 13234758-C-A **
15758548-T-C 13646668-T-C **
15755171-A-G 13643291-A-G **
15746498-T-A 13634618-T-A **
15725949-C-A 13614069-C-A **
15721112-C-A 13609232-C-A **
15717932-A-G 13606052-A-G **
21922090-A-AAG 19760204-A-AAG **
21975332-C-A 19813446-C-A **
15632099-C-A 13520219-C-A **
15598190-C-A 13486310-C-A **
15430712-C-A 13318832-C-A **
15411306-TACAAA-T 13299426-TACAAA-T **
15369075-G-A 13257195-G-A **
22000815-G-T 19838929-G-T **
15342600-C-A 13230719-C-A **
15844933-C-A 13733053-C-A **
15342505-C-CA 13230624-C-CA **
15290058-A-C 13178157-A-C **
15276719-G-A 13164808-G-A **
15221795-C-A 13109881-C-A **
15221706-T-G 13109792-T-G **
15202455-C-G 13090541-C-G **
22032538-C-A 19870652-C-A **
15146938-G-T 13035025-G-T **
15115744-G-A 13003831-G-A **
15034759-C-A 12922847-C-A **
14988906-C-A 12876972-C-A **
22060367-C-A 19898481-C-A **
9116683-T-C 9279074-T-C **
14881867-A-G 12769935-A-G **
15818520-C-A 13706640-C-A **
15864742-C-A 13752862-C-A **
17101648-C-A 14989768-C-A **
16351612-C-A 14239732-C-A **
17090936-C-A 14979056-C-A **
17004472-T-A 14892592-T-A **
16967442-T-G 14855562-T-G **
16814041-C-A 14702161-C-A **
16773148-C-A 14661268-C-A **
16765453-A-C 14653573-A-C **
21678635-T-A 19516749-T-A **
21795924-G-T 19634038-G-T **
16526501-C-A 14414621-C-A **
16516008-C-G 14404128-C-G **
16505042-A-T 14393162-A-T **
16497971-A-C 14386091-A-C **
21858241-C-A 19696355-C-A **
16379111-C-A 14267231-C-A **
16351602-C-A 14239722-C-A **
15921969-G-T 13810089-G-T **
21862266-A-G 19700380-A-G **
16284198-C-A 14172318-C-A **
16277938-C-A 14166058-C-A **
16275764-C-A 14163884-C-A **
16270952-G-T 14159072-G-T **
16267300-G-T 14155420-G-T **
16245731-G-C 14133851-G-C **
16242985-C-A 14131105-C-A **
16171483-C-A 14059603-C-A **
16157743-A-G 14045863-A-G P8_Dst **
16035585-C-G 13923705-C-G **
16017951-T-C 13906071-T-C **
15999725-G-T 13887845-G-T **
15924185-C-T 13812305-C-T **
23104403-T-A 20942517-T-A **
9075284-G-T 9237675-G-T **
23137573-A-T 20975687-A-T **
10625724-A-C **
11004909-C-A **
10896334-A-C **
6953303-C-A 7085262-C-A **
14316251-G-A 12195545-G-A **
23137009-C-A 20975123-C-A **
23808130-T-A 21646244-T-A **
7185602-C-A 7317561-C-A **
10026771-C-A 10189162-C-A **
23810641-C-A 21648755-C-A **
56857992-G-T **
18795610-G-T 16683730-G-T **
8142820-A-C 8274779-A-C **
23818041-C-A 21656155-C-A **
10625723-A-G **
23808116-G-C 21646230-G-C **
16148211-G-T 14036331-G-T P8_Dst **
21774630-A-G **
23875337-C-A 21713451-C-A **
6768884-GC-G 6900843-GC-G **
18890464-CAAAA-C 16778584-CAAAA-C 15×A**
56832509-C-A **
24003166-T-G 21857019-T-G **
17889815-C-A 15777935-C-A **
10763130-C-G **
10763108-T-A **
24425299-C-A 22279152-C-A **
17217073-C-A 15105193-C-A **
24425309-C-A 22279162-C-A **
14949127-C-A 12837201-C-A **
5710679-C-A 5842638-C-A **
13593862-C-A 11438186-C-A **
15128121-CTTTTT-C 13016208-CTTTTT-C 18×T**
3016478-C-A 3148437-C-A **
21253766-C-A 19091880-C-A **
3544623-C-A 3676582-C-A **
3411550-G-A 3543509-G-A **
3388492-C-G 3520451-C-G **
3330963-T-A 3462922-T-A **
3272617-G-T 3404576-G-T **
3267469-C-G 3399428-C-G **
3251079-C-A 3383038-C-A **
3130903-C-A 3262862-C-A **
3122549-ACTAATATTTTAAGGTTATCTCAAATCACATATG-A 3254508-ACTAATATTTTAAGGTTATCTCAAATCACATATG-A **
3112422-A-C 3244381-A-C **
3093656-A-G 3225615-A-G **
3079465-G-T 3211424-G-T **
3018010-G-T 3149969-G-T **
3015697-G-C 3147656-G-C **
8214901-C-A 8346860-C-A **
2873843-G-T 3005802-G-T **
2833395-C-A 2965354-C-A **
2730030-T-G 2861989-T-G **
2701334-C-A 2833293-C-A **
2688805-T-C 2820764-T-C **
2682748-C-A 2814707-C-A **
21713493-C-A 19551607-C-A **
14831920-C-A 12719987-C-A **
17052795-C-A 14940915-C-A **
18949719-C-A 16837839-C-A **
15503512-T-C 13391632-T-C **
28550062-G-T 26403915-G-T **
19645763-G-T 17533883-G-T P5_Prx **
21589616-C-A 19427730-C-A **
15975291-T-G 13863411-T-G **
17637638-AACACAC-A 15525758-AACACAC-A 21×AC**
3610378-G-A 3742337-G-A **
28761239-C-T 26615092-C-T **
3555279-G-A 3687238-G-A **
28617698-G-T 26471551-G-T **
28621847-C-A 26475700-C-A **
28622234-C-A 26476087-C-A **
28640287-C-G 26494140-C-G **
28644442-A-G 26498295-A-G **
28674628-A-C 26528481-A-C **
28687399-C-A 26541252-C-A **
28700551-C-A 26554404-C-A **
28756973-CA-C 26610826-CA-C **
28761217-A-C 26615070-A-C **
28761224-A-AAAG 26615077-A-AAAG **
28761227-CA-C 26615080-CA-C **
28761244-G-A 26615097-G-A **
3553001-C-A 3684960-C-A **
28762685-G-T 26616538-G-T **
28774480-C-A 26628333-C-A **
28783008-C-A 26636861-C-A **
28815145-A-G 26668998-A-G **
56830680-CATTCCACTCT-C **
56830834-C-T **
56839656-A-G **
56842918-C-T **
56843955-T-A **
56843971-C-A **
56844002-T-G **
56844008-C-A **
56844011-A-G **
56844015-G-T **
28608543-C-A 26462396-C-A **
22997045-TAC-T 20835159-TAC-T **
14562712-C-A 12450912-C-A **
24931823-C-G 22785676-C-G g1 **
16151812-A-AAATAT 14039932-A-AAATAT P8_Dst **
8982918-G-T 9145309-G-T **
24553465-A-G 22407318-A-G P3_t2 **
24668847-T-TC 22522700-T-TC P3_b2 **
6401771-C-A 6533730-C-A **
16904660-TC-T 14792780-TC-T **
58990110-G-A 56843963-G-A **
13553672-G-GA 11397996-G-GA 12×A**
17951705-C-A 15839825-C-A **
22517410-C-CA 20355524-C-CA 13×A**
4064345-TA-T 4196304-TA-T 11×A**
24877663-T-C 22731516-T-C g1 **
14295275-C-A 12174569-C-A **
8774522-C-T 8906481-C-T **
25951788-A-T 23805641-A-T P1_Y1 **
58971316-G-A 56825169-G-A **
25951807-G-A 23805660-G-A P1_Y1 **
25995443-AAT-A 23849296-AAT-A P1_Y1 **
22093071-A-T 19931185-A-T **
20717039-C-A 18555153-C-A P4_Prx 35×A**
26026583-A-G 23880436-A-G P1_Y1 **
26066424-C-A 23920277-C-A P1_Y1 **
26071979-A-T 23925832-A-T P1_Y1 **
27647556-G-A 25501409-G-A P1_Y2 **
27947065-AT-A 25800918-AT-A P1_Y2 **
27997658-A-G 25851511-A-G P1_Y2 **
28101347-G-GTTC 25955200-G-GTTC P1_Y2 **
28370119-C-A 26223972-C-A P1_gr2 **
28581553-A-G 26435406-A-G **
58971360-G-A 56825213-G-A **
3555336-A-C 3687295-A-C **
3552975-C-A 3684934-C-A **
3686477-G-A 3818436-G-A **
7138373-C-A 7270332-C-A **
7358298-G-T 7490257-G-T **
23419146-T-G 21257260-T-G **
23425513-C-A 21263627-C-A **
7337912-A-C 7469871-A-C **
7314578-C-A 7446537-C-A **
7285203-C-A 7417162-C-A **
7282319-G-T 7414278-G-T **
7275944-C-A 7407903-C-A **
7239797-C-T 7371756-C-T **
7228526-T-G 7360485-T-G **
7214295-G-A 7346254-G-A **
23440722-C-A 21278836-C-A **
7160738-C-A 7292697-C-A **
7104967-C-A 7236926-C-A **
23345845-T-C 21183959-T-C **
7083830-G-A 7215789-G-A **
7062278-T-C 7194237-T-C **
7062231-CA-C 7194190-CA-C **
7012489-A-T 7144448-A-T **
6978561-C-A 7110520-C-A **
6948149-G-T 7080108-G-T **
6945934-G-C 7077893-G-C **
6918372-A-C 7050331-A-C **
6901006-C-A 7032965-C-A **
6892608-C-G 7024567-C-G **
6852348-G-T 6984307-G-T **
6825543-T-A 6957502-T-A **
6816711-G-A 6948670-G-A **
3725897-C-A 3857856-C-A **
23411461-G-T 21249575-G-T **
7617973-T-C 7749932-T-C **
6747889-G-C 6879848-G-C **
8238270-T-C 8370229-T-C **
8911689-T-C 9043648-T-C **
8907530-T-C 9039489-T-C **
23142306-T-G 20980420-T-G **
23143202-G-C 20981316-G-C **
8815851-A-C 8947810-A-C **
23184290-C-A 21022404-C-A **
8770673-T-C 8902632-T-C **
8713083-C-A 8845042-C-A **
8673892-T-C 8805851-T-C **
8672861-A-C 8804820-A-C **
8501232-C-A 8633191-C-A **
8501223-C-A 8633182-C-A **
8376356-A-C 8508315-A-C **
8214910-C-A 8346869-C-A **
7635911-A-G 7767870-A-G **
8158927-T-C 8290886-T-C **
8146182-C-A 8278141-C-A **
8049138-C-A 8181097-C-A **
7994240-C-A 8126199-C-A **
7992224-A-T 8124183-A-T **
7894763-C-A 8026722-C-A **
7894702-C-A 8026661-C-A **
7864057-C-A 7996016-C-A **
7829740-G-A 7961699-G-A **
7828966-C-A 7960925-C-A **
7712538-C-A 7844497-C-A **
23243088-T-C 21081202-T-C **
7705718-C-A 7837677-C-A **
7645335-G-T 7777294-G-T **
6755932-C-A 6887891-C-A **
6800639-G-C 6932598-G-C **
6694750-T-C 6826709-T-C **
4134118-A-G 4266077-A-G **
6693020-C-G 6824979-C-G **
4919486-T-G 5051445-T-G **
4919478-A-T 5051437-A-T **
4769564-C-A 4901523-C-A **
4688061-A-G 4820020-A-G **
4688018-C-A 4819977-C-A **
4626398-C-A 4758357-C-A **
4567828-T-C 4699787-T-C **
4564826-C-A 4696785-C-A **
4470606-C-A 4602565-C-A **
4469987-C-A 4601946-C-A **
4288006-T-G 4419965-T-G **
4278778-G-GT 4410737-G-GT 15×T**
4201067-C-A 4333026-C-A **
4101019-T-C 4232978-T-C **
5090441-G-T 5222400-G-T **
4070077-C-A 4202036-C-A **
4049702-C-G 4181661-C-G **
4049699-T-A 4181658-T-A **
4002333-C-A 4134292-C-A **
3981402-A-AT 4113361-A-AT **
3981282-G-T 4113241-G-T **
3962455-A-T 4094414-A-T **
3955728-C-A 4087687-C-A **
23648157-A-G 21486271-A-G **
3875786-T-G 4007745-T-G **
3856130-C-A 3988089-C-A **
3852513-G-T 3984472-G-T **
3807465-G-T 3939424-G-T **
3726399-C-A 3858358-C-A **
5013722-C-A 5145681-C-A **
5011088-C-A 5143047-C-A **
5090527-T-C 5222486-T-C **
5785430-C-A 5917389-C-A **
6596422-G-T 6728381-G-T **
6541395-T-G 6673354-T-G **
6541314-C-A 6673273-C-A **
6531755-AT-A 6663714-AT-A 10×T**
23623412-C-A 21461526-C-A **
6478490-C-A 6610449-C-A **
6465472-C-A 6597431-C-A **
6374042-G-T 6506001-G-T **
6368948-G-T 6500907-G-T **
6259616-G-T 6391575-G-T IR3_Dst **
6119709-C-T 6251668-C-T **
6010142-C-A 6142101-C-A **
5884955-T-G 6016914-T-G **
6115359-G-C 6247318-G-C **
5710688-C-T 5842647-C-T **
5313591-G-T 5445550-G-T **
5127912-C-A 5259871-C-A **
5180502-C-T 5312461-C-T **
5221160-C-A 5353119-C-A **
5240964-C-T 5372923-C-T **
5275469-G-T 5407428-G-T **
5275812-C-A 5407771-C-A **
21394870-A-G 19232984-A-G **
5458763-G-T 5590722-G-T **
5409523-G-T 5541482-G-T **
5534723-GA-G 5666682-GA-G 8×A**
5557779-C-A 5689738-C-A **
5562258-A-T 5694217-A-T **
21428265-C-A 19266379-C-A ***
23630171-C-A 21468285-C-A ***
23492490-T-A 21330604-T-A ***
56832088-T-A,C ***
56834563-C-G ***
22825572-T-C 20663686-T-C ***
23792029-CTT-C,CTTT 21630143-CTT-C,CTTT 15×T***
23572599-G-A 21410713-G-A ***
21446479-C-T 19284593-C-T ***
56832059-A-C,G ***
13723337-T-G 11567661-T-G ***
21212417-C-A 19050531-C-A ***
19411914-A-AAAAG,T 17300034-A-AAAAG,T 14×AAAG***
13701429-GAATGAAATGGAATTC-G,GAATGAAATGGAATGG 11545753-GAATGAAATGGAATTC-G,GAATGAAATGGAATGG ***
13823163-G-A 11702457-G-A ***
6979544-C-CT 7111503-C-CT A4556 9×T***
8333626-A-ACTT,T 8465585-A-ACTT,T 25×CTT***
13457454-T-G 11301778-T-G ***
13493845-T-A 11338169-T-A ***
13493850-T-A 11338174-T-A ***
13719741-A-ATGGAATGGAT 11564065-A-ATGGAATGGAT ***
13719768-C-T 11564092-C-T ***
13860283-T-A 11739577-T-A ***
13862198-A-G 11741492-A-G ***
24110670-T-C 21964523-T-C P3_b1 ***
13862224-T-A 11741518-T-A ***
58821436-C-G 56769435-G-C ***
58821506-G-GCATTCCATTC 56769335-A-AAATGGAATGG 5×CATTC***
58978405-C-A 56832258-C-A ***
13829430-T-C,TAATGG 11708724-T-C,TAATGG 9×AATGG***
13447896-CGTTCA-C,CATTCC 11292220-CGTTCA-C,CATTCC ***
13470474-G-A 11314798-G-A ***
13457771-C-T 11302095-C-T ***
14880241-AT-A,ATT 12768311-AT-A,ATT 17×T***
13470463-G-T 11314787-G-T ***
13470489-C-T 11314813-C-T ***
6177481-TTGTG-T,TTG 6309440-TTGTG-T,TTG IR3_Dst 23×TG***
58978392-G-T 56832245-G-T ***
13862184-T-C 11741478-T-C ***
13433339-A-C 11277663-A-C ***
58819432-C-T 56771439-G-A ***
27791848-T-G 25645701-T-G P1_Y2 ***
22511612-A-T 20349726-A-T DYZ19 ***
13493849-T-TTGTTA 11338173-T-TTGTTA ***
13864431-A-G 11743725-A-G ***
13843723-T-A 11723017-T-A ***
13457396-C-T 11301720-C-T ***
13446705-C-T 11291029-C-T ***
13700809-A-G 11545133-A-G ***
13700810-C-A 11545134-C-A ***
24300813-C-CT 22154666-C-CT P3_t1 25×T***
18378959-CTT-C 16267079-CTT-C P6_Prx 28×T***
58819409-A-T 56771462-T-A ***
13862180-G-A 11741474-G-A ***
13869034-G-A 11748328-G-A ***
13829444-G-C 11708738-G-C ***
13489775-G-A 11334099-G-A ***
9974506-C-T 10136897-C-T ***
13457439-T-G 11301763-T-G ***
13457446-C-T 11301770-C-T ***
26117853-C-A 23971706-C-A P1_Y1 27×A***
13493852-G-T 11338176-G-T 7×TTATT***
13457452-C-A 11301776-C-A ***
58978552-G-T 56832405-G-T ***
58978394-A-G 56832247-A-G ***
13458787-A-T 11303111-A-T ***
13489681-C-G 11334005-C-G ***
13470566-A-T 11314890-A-T ***
21205611-C-A 19043725-C-A ***
15346826-C-A 13234945-C-A ***
13472805-C-A 11317129-C-A ***
13624346-G-A 11468670-G-A ***
14172487-C-A 12051781-C-A ***
14174008-C-A 12053302-C-A ***
14224529-C-A 12103823-C-A ***
14369318-C-A 12248614-C-A ***
14455901-C-A 12335174-C-A ***
14553384-A-T 12441585-A-T ***
14748860-A-G 12636929-A-G ***
14943535-C-A 12831609-C-A ***
15185252-C-T 13073338-C-T ***
15687602-G-T 13575722-G-T ***
13462470-C-A 11306794-C-A ***
15709389-C-A 13597509-C-A ***
16320198-G-T 14208318-G-T ***
16428289-C-A 14316409-C-A ***
16692715-T-C 14580835-T-C ***
16761425-C-A 14649545-C-A ***
17394652-C-A 15282772-C-A ***
18673586-C-A 16561706-C-A ***
18750538-G-T 16638658-G-T ***
18891980-C-A 16780100-C-A ***
19284316-C-A 17172436-C-A ***
20806996-G-A 18645110-G-A P4_Gap ***
13471452-C-A 11315776-C-A ***
13447723-C-A 11292047-C-A ***
7311601-TCCTT-T,TCCTC 7443560-TCCTT-T,TCCTC ***
8799503-G-A 8931462-G-A ***
3925852-T-C 4057811-T-C ***
3966981-G-T 4098940-G-T ***
6490921-C-A 6622880-C-A ***
6796543-C-A 6928502-C-A ***
7078379-C-A 7210338-C-A ***
7204682-G-A 7336641-G-A ***
7341696-C-A 7473655-C-A ***
7356078-C-A 7488037-C-A ***
7406855-C-A 7538814-C-A ***
7461406-A-G 7593365-A-G IR1_L ***
7705807-C-A 7837766-C-A ***
8875637-A-G 9007596-A-G ***
13723342-G-C 11567666-G-C ***
8897154-C-A 9029113-C-A ***
9095901-G-T 9258292-G-T ***
9165510-C-A 9327901-C-A ***
10663660-TCCACTCCACC-T,TCCACTCCACTCCACC ***
10663673-G-A,T ***
10785287-C-T ***
10785308-C-T ***
10785316-T-G ***
10899901-C-T ***
13220316-C-A 11064640-C-A ***
13258805-T-A 11103129-T-A ***
13314455-C-A 11158779-C-A ***
13446736-C-A 11291060-C-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 665011047644875464897610710
Kit: 66501941906576736217591704
Used in age calculations1047644876736217610710
Counts of SNPs22
Variant counts last updated 2018-01-19 20:51:20.



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