Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > ZZ10 > Z253 > Z2534 > ~22280136-C-G > FGC5618 > L226 > FGC5660 > Z17669 > ZZ31 > DC28 > FGC12295 > FGC12290 > FGC12289

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
25505
BigY2
25505
13471850-G-A 11316174-G-A A*
6335231-T-C 6467190-T-C IR3_Dst A*
13471848-C-G 11316172-C-G A*
26014912-T-C 23868765-T-C P1_Y1 A*
20041954-A-T 17930074-A-T P5_Prx A*
28817568-C-A 26671421-C-A A*
19113388-G-A 17001508-G-A FGC12299 YY++
8179262-G-A 8311221-G-A FGC12291 YY++
13989071-C-A 11868365-C-A **
14195283-C-A 12074577-C-A **
13942370-C-G 11821664-C-G **
13944689-C-A 11823983-C-A **
13960933-C-A 11840227-C-A **
14168135-C-T 12047429-C-T **
13967387-C-A 11846681-C-A **
14107738-C-A 11987032-C-A **
13996571-C-A 11875865-C-A **
14118407-T-C 11997701-T-C **
14032540-C-A 11911834-C-A **
14046767-C-A 11926061-C-A **
13939193-C-A 11818487-C-A **
14046773-C-A 11926067-C-A **
14073181-C-A 11952475-C-A **
14086036-C-A 11965330-C-A **
14011267-G-T 11890561-G-T **
56850669-G-T **
13936269-G-A 11815563-G-A **
13402653-C-A 11246977-C-A **
13239870-T-A 11084194-T-A **
13255267-G-A 11099591-G-A **
13255664-T-A 11099988-T-A **
13257606-C-A 11101930-C-A **
13258674-C-T 11102998-C-T **
13289394-C-A 11133718-C-A **
13323943-T-C 11168267-T-C **
13404747-T-A 11249071-T-A **
11672286-T-C **
13465341-C-A 11309665-C-A **
13491151-A-G 11335475-A-G **
13596472-C-A 11440796-C-A **
13596489-G-A 11440813-G-A **
11648887-A-G **
11663930-GA-G **
11668230-A-G **
11671573-C-A **
13829189-C-A 11708483-C-A **
14203903-C-A 12083197-C-A **
14203367-C-A 12082661-C-A **
15138103-C-A 13026190-C-A **
14765228-C-T 12653297-C-T **
14799928-G-T 12687999-G-T **
14986466-C-A 12874534-C-A **
15012792-C-T 12900880-C-T **
15047465-C-A 12935556-C-A **
15070471-T-G 12958562-T-G **
15070476-G-A 12958567-G-A **
15157617-A-G 13045704-A-G **
14693507-C-T 12581573-C-T **
15157620-C-G 13045707-C-G **
15157629-C-T 13045716-C-T **
15157636-C-T 13045723-C-T **
15157649-T-C 13045736-T-C **
15157650-C-T 13045737-C-T **
15157660-C-A 13045747-C-A **
15157671-G-C 13045758-G-C **
15157682-G-A 13045769-G-A **
14696843-C-G 12584909-C-G **
14605886-C-A 12494088-C-A **
13237519-C-A 11081843-C-A **
14471693-C-A 12350962-C-A **
14216291-C-A 12095585-C-A **
14229907-C-A 12109201-C-A **
14347900-T-G 12227195-T-G **
14350108-C-A 12229403-C-A **
14384531-G-T 12263827-G-T **
14387745-C-G 12267041-C-G **
14392916-A-G 12272212-A-G **
14456036-T-C 12335309-T-C **
14471870-A-G 12351139-A-G **
14596044-C-A 12484244-C-A **
14485804-C-A 12365073-C-A **
14485849-C-T 12365118-C-T **
12370694-G-A **
14495704-C-G 12383901-C-G **
14511464-A-G 12399669-A-G **
14549136-C-A 12437337-C-A **
14549215-T-G 12437416-T-G **
14557046-C-A 12445247-C-A **
13237621-A-G 11081945-A-G **
13213337-C-A 11057661-C-A **
13234386-C-A 11078710-C-A **
10691398-A-ATTCAC **
10667754-G-T **
10668322-T-A **
10673792-G-C **
10682576-C-A **
10682581-C-A **
10682592-C-T **
10688287-T-A **
10693177-T-A **
10655074-CAT-C **
10766315-T-A **
10777813-G-T **
10778759-C-A **
10791217-A-T **
10792980-C-A **
10794761-C-A **
10794785-C-A **
10800990-C-A **
10662228-A-C **
10655060-T-TCAA **
10801478-G-T **
8850414-C-A 8982373-C-A **
8237383-T-G 8369342-T-G **
8237390-C-G 8369349-C-G **
8237391-C-G 8369350-C-G **
8237401-T-G 8369360-T-G **
8237413-G-T 8369372-G-T **
8649501-C-A 8781460-C-A **
8699751-A-T 8831710-A-T **
8720187-C-A 8852146-C-A **
9123436-C-G **
10653235-A-T **
9678377-A-T 9840768-A-T IR3_Prx **
9830557-C-A 9992948-C-A **
9885041-T-G 10047432-T-G **
9941450-C-A 10103841-C-A **
9942988-C-A 10105379-C-A **
9966038-GA-G 10128429-GA-G **
10023648-C-A 10186039-C-A **
10653208-C-A **
10801361-C-A **
10801497-C-G **
13218075-C-A 11062399-C-A **
10997004-C-G **
10954378-C-G **
10968206-TTCCAC-T **
10992836-C-A **
10994507-G-T **
10996986-A-T **
10996987-T-C **
10996989-C-A **
10997013-C-T **
10954349-T-C **
10997014-C-A **
10997029-C-T **
10997031-C-A **
10997049-G-T **
11010153-C-A **
11018544-C-T **
11033795-G-T **
15171378-C-A 13059464-C-A **
10954368-T-C **
10954341-C-G **
10801501-C-A **
10841980-A-T **
10801507-C-T **
10802379-T-C **
10802471-C-A **
10803441-C-T **
10803576-C-T **
10814527-C-A **
10841961-T-TAGTA **
10841969-C-T **
10868962-A-C **
10954340-C-T **
10892488-C-A **
10892493-C-T **
10894915-C-A **
10922443-C-A **
10935401-C-G **
10940466-C-T **
10954292-A-AATCCG **
10954303-T-TTCCCC **
15157695-A-T 13045782-A-T **
15397890-A-G 13286010-A-G **
15264727-A-G 13152817-A-G **
21703194-C-A 19541308-C-A **
21388667-C-CGTT 19226781-C-CGTT 14×T**
21426949-C-A 19265063-C-A 8×A**
21450864-A-T 19288978-A-T **
21511307-T-G 19349421-T-G **
21551427-T-G 19389541-T-G **
21629471-C-A 19467585-C-A **
21677586-C-A 19515700-C-A **
21923961-C-A 19762075-C-A **
21381945-T-C 19220059-T-C **
21935097-C-A 19773211-C-A **
21948998-C-A 19787112-C-A **
21993861-C-A 19831975-C-A **
22002002-C-A 19840116-C-A **
22002396-C-A 19840510-C-A **
22048581-C-A 19886695-C-A **
22133889-C-A 19972003-C-A **
22253066-G-A 20091180-G-A DYZ19 **
21382079-C-A 19220193-C-A **
21320160-A-T 19158274-A-T **
22517211-C-A 20355325-C-A **
20025432-CCTCTCTCT-C 17913552-CCTCTCTCT-C P5_Prx 25×CT**
19447566-C-A 17335686-C-A **
19465636-A-T 17353756-A-T **
19527132-C-A 17415252-C-A **
19529270-C-A 17417390-C-A **
19544032-A-G 17432152-A-G **
19756711-G-A 17644831-G-A P5_Prx **
20025409-TTCTC-T 17913529-TTCTC-T P5_Prx **
20629113-T-C 18467227-T-C P4_Prx **
21308265-C-A 19146379-C-A **
20689817-T-TTA 18527931-T-TTA P4_Prx **
20726955-A-C 18565069-A-C P4_Prx **
20775742-A-AC 18613856-A-AC P4_Prx **
20888558-G-T 18726672-G-T P4_Dst **
21140056-C-A 18978170-C-A **
21154586-C-A 18992700-C-A **
21207067-C-A 19045181-C-A **
21253953-T-G 19092067-T-G **
22263741-A-T 20101855-A-T DYZ19 **
22614008-G-T 20452122-G-T **
19293766-G-A 17181886-G-A **
28505376-T-C 26359229-T-C **
26043789-T-A 23897642-T-A P1_Y1 **
26098000-C-A 23951853-C-A P1_Y1 **
27509351-A-AG 25363204-A-AG P1_Y2 **
27540969-CAA-C 25394822-CAA-C P1_Y2 **
27540975-C-A 25394828-C-A P1_Y2 **
27596076-G-A 25449929-G-A P1_Y2 **
28479745-T-C 26333598-T-C **
28520603-C-T 26374456-C-T **
25733052-A-AG 23586905-A-AG P1_b3 **
28697072-G-T 26550925-G-T **
28745218-C-A 26599071-C-A **
28760738-G-T 26614591-G-T **
28775438-T-C 26629291-T-C **
28795861-A-T 26649714-A-T **
56825757-A-G **
56830139-T-A **
56845715-C-A **
25931445-G-A 23785298-G-A P1_Y1 **
25175815-C-A 23029668-C-A g1 **
22614072-T-C 20452186-T-C **
23377570-G-A 21215684-G-A **
22634972-C-A 20473086-C-A **
22824920-A-G 20663034-A-G **
22951124-G-T 20789238-G-T **
22961971-CT-C 20800085-CT-C 8×T**
23013716-C-A 20851830-C-A **
23056304-C-A 20894418-C-A **
23079086-T-A 20917200-T-A **
23252617-G-T 21090731-G-T **
23459671-T-A 21297785-T-A **
24409238-A-T 22263091-A-T **
23512386-A-G 21350500-A-G **
23514223-C-A 21352337-C-A **
23633445-G-C 21471559-G-C **
23741983-C-A 21580097-C-A **
24220830-G-C 22074683-G-C P3_b1 **
24244645-C-A 22098498-C-A P3_b1 **
24302839-A-G 22156692-A-G P3_t1 **
24302883-C-T 22156736-C-T P3_t1 **
19319868-AT-A 17207988-AT-A **
19268404-C-A 17156524-C-A **
15276747-C-A 13164836-C-A **
16605065-C-A 14493185-C-A **
16413449-C-A 14301569-C-A **
16413632-C-A 14301752-C-A **
16417312-T-C 14305432-T-C **
16426566-G-T 14314686-G-T **
16475337-A-G 14363457-A-G **
16583310-G-T 14471430-G-T **
16602753-C-A 14490873-C-A **
16656790-C-A 14544910-C-A **
16379267-G-A 14267387-G-A **
16745070-G-A 14633190-G-A **
16905764-A-G 14793884-A-G **
17048026-C-A 14936146-C-A **
17092603-C-A 14980723-C-A **
17093814-C-T 14981934-C-T **
17135668-A-G 15023788-A-G **
17153479-T-A 15041599-T-A **
17323546-G-A 15211666-G-A **
16405326-C-A 14293446-C-A **
16352037-A-G 14240157-A-G **
17402457-C-A 15290577-C-A **
15860285-C-A 13748405-C-A **
15279419-A-G 13167518-A-G **
8172747-G-T 8304706-G-T **
15402970-C-A 13291090-C-A **
15530059-G-C 13418179-G-C **
15604237-C-A 13492357-C-A **
15626522-G-T 13514642-G-T **
15671269-C-A 13559389-C-A **
15789163-A-G 13677283-A-G **
15866092-G-A 13754212-G-A **
16336922-AG-C 14225042-AG-C **
15899064-T-TA 13787184-T-TA 11×A**
15905019-G-T 13793139-G-T **
16046223-C-A 13934343-C-A **
16046265-C-A 13934385-C-A **
16049032-T-G 13937152-T-G **
16060401-C-A 13948521-C-A **
16136054-T-A 14024174-T-A P8_Dst **
16171656-C-A 14059776-C-A **
17380776-G-A 15268896-G-A **
17425091-C-A 15313211-C-A **
19248855-C-A 17136975-C-A **
18857589-TTG-T 16745709-TTG-T **
18425210-C-A 16313330-C-A P6_Gap **
18565054-T-C 16453174-T-C **
18629406-C-A 16517526-C-A **
18636676-C-A 16524796-C-A **
18748855-C-T 16636975-C-T **
18749337-T-A 16637457-T-A **
18819408-T-G 16707528-T-G **
18858671-C-A 16746791-C-A **
18253180-G-A 16141300-G-A **
18980375-A-C 16868495-A-C **
18988650-C-A 16876770-C-A **
19052288-G-C 16940408-G-C **
19079263-C-T 16967383-C-T **
19183897-C-T 17072017-C-T **
19183900-C-T 17072020-C-T **
19183903-A-T 17072023-A-T **
19216496-G-A 17104616-G-A **
18253192-T-A 16141312-T-A **
18253164-G-A 16141284-G-A **
17444737-C-A 15332857-C-A **
17884663-A-C 15772783-A-C **
17494625-C-A 15382745-C-A **
17535654-C-A 15423774-C-A **
17567303-G-T 15455423-G-T **
17672070-C-A 15560190-C-A **
17717178-C-A 15605298-C-A **
17804272-T-G 15692392-T-G **
17825852-C-A 15713972-C-A **
17884661-T-G 15772781-T-G **
17885756-G-T 15773876-G-T **
18249968-C-A 16138088-C-A **
18055572-T-A 15943692-T-A **
18055646-G-T 15943766-G-T **
18055777-A-C 15943897-A-C **
18055811-C-A 15943931-C-A **
18085428-G-T 15973548-G-T **
18092978-C-A 15981098-C-A **
18130513-C-T 16018633-C-T **
18231328-T-G 16119448-T-G **
8214282-G-T 8346241-G-T **
9107947-G-A **
8102560-C-A 8234519-C-A **
17527414-G-A 15415534-G-A **
10996924-C-T **
27540977-A-AC 25394830-A-AC P1_Y2 **
16136070-T-TA 14024190-T-TA P8_Dst **
24595392-C-A 22449245-C-A P3_t2 **
28566856-C-A 26420709-C-A **
22017997-T-TA 19856111-T-TA 10×A**
15952700-A-T 13840820-A-T **
10954303-T-C **
7270311-T-G 7402270-T-G **
15157640-C-G 13045727-C-G **
6475356-C-A 6607315-C-A **
10996933-T-C **
11668936-C-A **
22085488-T-G 19923602-T-G **
10801463-G-A **
10801462-G-C **
10801458-G-C **
10801456-C-G **
10801448-A-G **
10801447-C-T **
10801427-A-C **
10801426-G-T **
10996925-C-A **
10996947-G-C **
10801413-G-T **
10940056-T-C **
10693205-T-A **
9094383-G-T 9256774-G-T **
5358547-C-A 5490506-C-A **
10655117-T-C **
10655095-A-T **
10655083-C-A **
6828826-C-A 6960785-C-A **
4049762-C-A 4181721-C-A **
14473710-C-A 12352979-C-A **
24283329-G-A 22137182-G-A P3_t1 **
23579373-C-A 21417487-C-A **
10996950-GT-G **
13480455-G-C 11324779-G-C **
10655057-T-TCGACTGC **
20101689-TGTAA-T 17989809-TGTAA-T P5_Dst **
4226012-G-T 4357971-G-T **
11648853-T-G **
13944727-C-A 11824021-C-A **
14523951-C-CGT 12412152-C-CGT 12×GT**
17480223-C-A 15368343-C-A **
17367702-T-G 15255822-T-G **
10937434-CAATTC-G **
6692998-C-A 6824957-C-A **
10801417-C-CCCGCCACACA **
18565048-C-G 16453168-C-G **
56830128-C-CACT **
8237403-T-G 8369362-T-G **
16612582-T-TAC 14500702-T-TAC 10×AC**
26834532-A-AGAAGGAAG 24688385-A-AGAAGGAAG P1_g2 12×GAAG**
2750839-CAAAAA-C 2882798-CAAAAA-C 16×A**
58978285-C-T 56832138-C-T **
19286360-C-A 17174480-C-A **
21863870-C-A 19701984-C-A **
28812960-A-T 26666813-A-T **
26400765-A-AT 24254618-A-AT P1_Y1 11×T**
3672888-A-G 3804847-A-G **
17923746-AAAAGAAAG-A 15811866-AAAAGAAAG-A 11×AAAG**
3909132-C-A 4041091-C-A **
13457663-A-G 11301987-A-G **
10026792-A-G 10189183-A-G **
8907675-G-A 9039634-G-A **
13465321-C-A 11309645-C-A **
58905259-A-C 56685612-T-G **
14327083-C-A 12206377-C-A CTS2489 S3348 **
58976285-T-C 56830138-T-C **
13457683-T-A 11302007-T-A **
5471998-AAG-A 5603957-AAG-A **
17060122-G-T 14948242-G-T CTS6686 **
58976274-G-C 56830127-G-C **
22893369-C-CTTTCT 20731483-C-CTTTCT 10×T**
7197385-A-T 7329344-A-T **
58976287-T-C 56830140-T-C **
7105150-C-A 7237109-C-A **
10825270-C-A **
10801381-G-C **
10885144-C-G **
10661272-C-T **
11645811-C-A **
10023674-C-A 10186065-C-A **
18895707-G-GAA 16783827-G-GAA 12×A**
10759189-T-TCCAAC **
10747025-T-A **
10746982-C-T **
10841963-C-T **
11021368-A-T **
58982848-G-C 56836701-G-C **
10655070-ATTC-A **
10943351-C-A **
10965624-C-T **
6892603-C-A 7024562-C-A **
14146642-G-GTA 12025936-G-GTA 8×TA**
10766313-T-A **
13527137-C-A 11371461-C-A **
6868907-C-A 7000866-C-A **
56849702-A-G **
17884667-C-T 15772787-C-T **
20842491-A-T 18680605-A-T P4_Dst **
15198636-C-A 13086722-C-A **
7018056-G-A 7150015-G-A **
56830130-T-TGC **
5859214-T-C 5991173-T-C **
7021727-G-T 7153686-G-T **
6948253-C-A 7080212-C-A **
6918520-C-A 7050479-C-A **
6791665-C-A 6923624-C-A **
6633114-C-A 6765073-C-A **
6510140-T-C 6642099-T-C **
6414926-C-A 6546885-C-A **
6402637-T-C 6534596-T-C **
6368197-C-A 6500156-C-A **
5873741-C-A 6005700-C-A **
5853843-GAGTTTATTTTTAGAGC-G 5985802-GAGTTTATTTTTAGAGC-G **
7021764-A-G 7153723-A-G **
5809201-A-G 5941160-A-G **
5785466-T-A 5917425-T-A **
5785462-T-A 5917421-T-A **
5782453-C-A 5914412-C-A **
5249076-C-A 5381035-C-A **
5235286-C-A 5367245-C-A **
5200163-T-C 5332122-T-C **
7629888-A-T 7761847-A-T **
5011174-C-A 5143133-C-A **
4929265-C-A 5061224-C-A **
4920524-A-T 5052483-A-T **
7629877-C-A 7761836-C-A **
7043426-C-A 7175385-C-A **
4840740-C-A 4972699-C-A **
7231362-C-A 7363321-C-A **
7430665-C-A 7562624-C-A **
7462628-T-C 7594587-T-C IR1_L **
7418328-C-A 7550287-C-A **
7371828-A-T 7503787-A-T **
7338954-C-A 7470913-C-A **
10841971-T-C **
7331325-C-A 7463284-C-A **
7320543-C-A 7452502-C-A **
7313592-T-A 7445551-T-A **
7254430-C-A 7386389-C-A **
7238924-A-T 7370883-A-T **
7225700-C-A 7357659-C-A **
7107206-A-G 7239165-A-G **
7499771-G-A 7631730-G-A IR1_L **
7197414-A-G 7329373-A-G **
7197234-C-A 7329193-C-A **
7179900-C-A 7311859-C-A **
7159120-T-A 7291079-T-A **
7157091-C-A 7289050-C-A **
7156847-T-G 7288806-T-G **
7142749-C-A 7274708-C-A **
7142283-C-A 7274242-C-A **
7134138-C-T 7266097-C-T **
7127358-C-A 7259317-C-A **
4888106-C-A 5020065-C-A **
6709056-C-A 6841015-C-A **
4784001-A-G 4915960-A-G **
2895088-C-T 3027047-C-T **
3535717-C-A 3667676-C-A **
15264728-T-G 13152818-T-G **
3347078-C-A 3479037-C-A **
3275368-G-A 3407327-G-A **
3252468-A-G 3384427-A-G **
3218653-A-C 3350612-A-C **
3112377-T-C 3244336-T-C **
3052011-C-A 3183970-C-A **
2916081-C-A 3048040-C-A **
2892620-C-A 3024579-C-A **
3821131-C-A 3953090-C-A **
10946674-C-A **
6765637-TCGG-T 6897596-TCGG-T **
14356292-C-A 12235587-C-A **
14229735-C-A 12109029-C-A **
23317709-C-T 21155823-C-T **
7733509-C-A 7865468-C-A **
8237387-A-C 8369346-A-C **
10801473-A-C **
10965551-C-T **
10965550-A-G **
3622185-C-A 3754144-C-A **
24244631-C-T 22098484-C-T P3_b1 **
3980644-G-T 4112603-G-T **
4547652-A-G 4679611-A-G **
4093491-C-A 4225450-C-A **
4382428-T-G 4514387-T-G **
4561555-A-G 4693514-A-G **
4443610-T-C 4575569-T-C **
3865097-G-T 3997056-G-T **
4215930-G-T 4347889-G-T **
13838226-CAGATG-C,G 11717520-CAGATG-C,G ***
13706455-A-G 11550779-A-G ***
13805376-G-A 11684670-G-A ***
28798952-C-A 26652805-C-A ***
22113171-G-A 19951285-G-A ***
13459102-G-A,C 11303426-G-A,C ***
13706465-A-C 11550789-A-C ***
13706467-G-C 11550791-G-C ***
13866698-TA-T 11745992-TA-T ***
13706482-C-T 11550806-C-T ***
13706490-T-A 11550814-T-A ***
22172421-G-C 20010535-G-C ***
13470764-C-T 11315088-C-T ***
13706491-A-T 11550815-A-T ***
13723327-G-C 11567651-G-C ***
56832530-T-C ***
8549032-G-GTTTT 8680991-G-GTTTT 23×T***
2665141-C-A 2797100-C-A 19×A***
13473032-T-C 11317356-T-C ***
13473020-A-C 11317344-A-C ***
13453073-C-A 11297397-C-A ***
13451328-A-T 11295652-A-T ***
21237249-C-A 19075363-C-A ***
13448821-TTCCATTCCATTCCAC-T 11293145-TTCCATTCCATTCCAC-T ***
10024262-C-G 10186653-C-G ***
10024259-T-C 10186650-T-C ***
9987271-G-A 10149662-G-A ***
13473034-T-A 11317358-T-A ***
6286901-CA-C 6418860-CA-C IR3_Dst 10×A***
13473040-AT-A 11317364-AT-A ***
13706452-T-C 11550776-T-C ***
9987266-A-G 10149657-A-G ***
13706453-A-G 11550777-A-G 4×AATGG***
24860018-C-A,CA 22713871-C-A,CA P3_b2 27×A***
9987264-C-T 10149655-C-T ***
9936680-T-C 10099071-T-C ***
21827606-CAAA-C 19665720-CAAA-C 21×A***
13453454-T-C,TATTCC 11297778-T-C,TATTCC 11×ATTCC***
9987269-T-C 10149660-T-C ***
22766850-C-A 20604964-C-A ***
13484121-C-A 11328445-C-A ***
22505865-A-T 20343979-A-T DYZ19 ***
28700881-C-A 26554734-C-A ***
26991333-T-TAA 24845186-T-TAA P1_r4 33×A***
2817709-C-CA 2949668-C-CA 30×A***
13648200-T-G 11492524-T-G ***
19250664-G-GTT 17138784-G-GTT 45×T***
13838787-C-G 11718081-C-G ***
22446625-T-A 20284739-T-A DYZ19 ***
13457716-G-GATTCC 11302040-G-GATTCC 12×ATTCC***
19411914-A-AG 17300034-A-AG 14×AAAG***
13453089-G-C 11297413-G-C ***
24300807-TGTC-T 22154660-TGTC-T P3_t1 ***
27699880-T-A 25553733-T-A P1_Y2 ***
13740768-A-G 11585092-A-G 4×AATGG***
13706269-G-A 11550593-G-A ***
15336049-AGT-A 13224167-AGT-A ***
9978136-T-A 10140527-T-A ***
13692467-A-C 11536791-A-C ***
17919883-G-A 15808003-G-A ***
21468736-A-T 19306850-A-T ***
28797184-TGTAAG-T,TGGAAT 26651037-TGTAAG-T,TGGAAT ***
13734518-A-C 11578842-A-C ***
13860124-G-A 11739418-G-A ***
56832182-G-GCATTC ***
9519818-TTC-T 9682209-TTC-T ***
7499418-G-T 7631377-G-T IR1_L ***
13471882-G-T 11316206-G-T ***
56830229-A-C,T ***
13450770-C-G 11295094-C-G ***
28817594-C-G 26671447-C-G ***
28804570-G-A 26658423-G-A ***
13453078-C-G 11297402-C-G ***
13805371-G-A 11684665-G-A ***
8216406-CTTTT-C,CT 8348365-CTTTT-C,CT 16×T***
22975513-C-A 20813627-C-A ***
24904674-GTT-G 22758527-GTT-G g1 21×T***
20717080-C-A 18555194-C-A P4_Prx ***
20717077-C-A 18555191-C-A P4_Prx ***
19682174-C-CA 17570294-C-CA P5_Prx 30×A***
13864535-T-C 11743829-T-C ***
13447644-AGCTCC-A,AACTCC 11291968-AGCTCC-A,AACTCC ***
22507686-T-A 20345800-T-A DYZ19 ***
13471875-T-G 11316199-T-G ***
13686866-T-A 11531190-T-A ***
21468742-A-T 19306856-A-T ***
13734501-GAAATGGAAT-G 11578825-GAAATGGAAT-G ***
8119489-G-T 8251448-G-T 14×T***
13734519-T-C 11578843-T-C ***
15379735-C-A 13267855-C-A ***
10809556-T-C ***
5586987-G-T 5718946-G-T ***
13466068-G-A 11310392-G-A ***
10934780-C-T ***
10934770-C-T ***
18564316-CTTTT-C 16452436-CTTTT-C 19×T***
22113186-TCAA-T 19951300-TCAA-T ***
8146176-C-A 8278135-C-A ***
10686632-A-T ***
10888066-C-T ***
16003052-C-T 13891172-C-T ***
16371118-ATT-A 14259238-ATT-A 15×T***
16340396-C-A 14228516-C-A ***
15157898-G-A 13045984-G-A ***
19447694-G-GA 17335814-G-GA 10×A***
58978969-T-TCCATC 56832822-T-TCCATC ***
13489618-CA-C 11333942-CA-C ***
10653553-T-A ***
16533396-A-G 14421516-A-G ***
14931802-C-A 12819867-C-A ***
13446579-C-T 11290903-C-T ***
28797637-TGGAATGGCGA-T,TGGAATGTCGA 26651490-TGGAATGGCGA-T,TGGAATGTCGA ***
10988572-TTCCATTCCAC-T,TTCCATTCCAA ***
13447119-T-TTACAC 11291443-T-TTACAC ***
13462362-C-A 11306686-C-A ***
10987765-A-C ***
2752442-T-A 2884401-T-A ***
2768116-A-G 2900075-A-G ***
13466087-T-A 11310411-T-A ***
3012763-C-T 3144722-C-T ***
2892542-ATTTT-A 3024501-ATTTT-A 18×T***
10986839-C-A ***
14571380-C-A 12459580-C-A ***
10982221-T-C ***
14285958-T-C 12165252-T-C ***
3790893-TA-T 3922852-TA-T ***
3833651-T-A 3965610-T-A ***
3853711-C-A 3985670-C-A ***
13448785-ACACCACTCCACTCCG-A 11293109-ACACCACTCCACTCCG-A ***
13811196-A-CGGGG 11690490-A-CGGGG ***
9959792-C-A 10122183-C-A ***
23472152-C-A 21310266-C-A ***
9424598-GAAAAA-G 9586989-GAAAAA-G 16×A***
17865075-A-AT 15753195-A-AT 10×T***
13734520-G-C 11578844-G-C ***
18369802-CA-C 16257922-CA-C P6_Prx 25×A***
21477814-AG-A 19315928-AG-A ***
21477809-GAAA-G 19315923-GAAA-G ***
21148620-G-A 18986734-G-A ***
20717083-C-A 18555197-C-A P4_Prx ***
20717074-AC-A 18555188-AC-A P4_Prx ***
20050982-A-T 17939102-A-T P5_Prx ***
19946720-CT-C 17834840-CT-C P5_Prx 10×T***
19411913-G-GAAA 17300033-G-GAAA ***
17678621-C-CT 15566741-C-CT 26×T***
22363968-A-C 20202082-A-C DYZ19 ***
17275015-C-T 15163135-C-T ***
15035213-G-GA 12923301-G-GA 10×A***
13862159-T-TCAAAC 11741453-T-TCAAAC ***
13860247-A-C 11739541-A-C ***
13860245-G-T 11739539-G-T ***
13839749-T-C 11719043-T-C ***
13835317-G-A 11714611-G-A ***
13735496-A-G 11579820-A-G ***
13734523-A-G 11578847-A-G ***
21732663-C-CT 19570777-C-CT 14×T***
22447490-G-T 20285604-G-T DYZ19 ***
10645999-C-A ***
58980962-C-A 56834815-C-A ***
16969400-CTT-C 14857520-CTT-C 11×T***
15859437-CTTTTTT-C 13747557-CTTTTTT-C 17×T***
58976160-C-G 56830013-C-G ***
7608436-CCTCT-C 7740395-CCTCT-C 15×CT***
17302264-T-A 15190384-T-A ***
17514200-C-A 15402320-C-A ***
13722815-A-T 11567139-A-T ***
17584154-TTTG-T 15472274-TTTG-T ***
14286806-TGC-T 12166100-TGC-T ***
58978062-C-T 56831915-C-T ***
22506392-T-C 20344506-T-C DYZ19 ***
28813964-T-A 26667817-T-A ***
28812763-G-A 26666616-G-A ***
28795170-C-G 26649023-C-G ***
28062569-C-CTTT 25916422-C-CTTT P1_Y2 16×T***
26099821-CCCTTTG-C 23953674-CCCTTTG-C P1_Y1 ***
26024548-CTTT-C 23878401-CTTT-C P1_Y1 17×T***
25149690-C-G 23003543-C-G g1 ***
24235387-G-T 22089240-G-T P3_b1 29×T***
24235384-T-TG 22089237-T-TG P3_b1 ***
9978106-C-G 10140497-C-G ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Haplotype Progression

The data below reveals the progression of changes in the haplotype. The bottom row is the haplotype for this man and above him are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are very much a work in progress, and any suggested modifications are appreciated. I think we can use our vast collection of haplotype data to refine these haplotypes. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

DYS393
DYS390
DYS19
DYS391
DYS385
DYS426
DYS388
DYS439
DYS389i
DYS392
DYS389ii
DYS458
DYS459
DYS455
DYS454
DYS447
DYS437
DYS448
DYS449
DYS464
DYS460
Y-GATA-H4
YCAII
DYS456
DYS607
DYS576
DYS570
CDY
DYS442
DYS438
DYS531
DYS578
DYF395S1
DYS590
DYS537
DYS641
DYS472
DYF406S1
DYS511
DYS425
DYS413
DYS557
DYS594
DYS436
DYS490
DYS534
DYS450
DYS444
DYS481
DYS520
DYS446
DYS617
DYS568
DYS487
DYS572
DYS640
DYS492
DYS565
DYS710
DYS485
DYS632
DYS495
DYS540
DYS714
DYS716
DYS717
DYS505
DYS556
DYS549
DYS589
DYS522
DYS494
DYS533
DYS636
DYS575
DYS638
DYS462
DYS452
DYS445
Y-GATA-A10
DYS463
DYS441
Y-GGAAT-1B07
DYS525
DYS712
DYS593
DYS650
DYS532
DYS715
DYS504
DYS513
DYS561
DYS552
DYS726
DYS635
DYS587
DYS643
DYS497
DYS510
DYS434
DYS461
DYS435
P312/S1161324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123315916122626191211131210912121011113012132413101020151913241712152412231810141791211
L21/S1451324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123515916122526191211131211912121011113012132413101020151913241712152412231810141791211
Wright1326151111-14121211131329178-911112515192913-13-15-16111119-231514171736-39121211915-1681010810101223-241510121215812232013121113111112123415916122524191111131211913121011113112132513101021151713241712152412231810141891211

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 255051015994073842777459815
Kit: 25505960668578249027727343
Used in age calculations1015994078249027727343
Counts of SNPs99
Variant counts last updated 2018-01-24 22:50:46.



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