Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > ZZ10 > Z253 > Z2534 > ~22280136-C-G > FGC5618 > L226 > FGC5660 > Z17669 > ZZ31 > FGC5628 > DC313

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
16274
BigY2
16274
6260108-G-A 6392067-G-A IR3_Dst ***A*
25887174-C-T 23741027-C-T P1_Y1 ***A*
26222127-C-T 24075980-C-T BY2468 P1_Y1 ***A*
22313617-G-T 20151731-G-T DYZ19 A*
13450247-C-G 11294571-C-G A*
5309834-C-G 5441793-C-G DC14 **+
13304119-G-A 11148443-G-A DC208 ++
7765005-A-T 7896964-A-T DC15 YY++
22425155-A-G 20263269-A-G DYZ19 ***+
7265692-G-T 7397651-G-T PF5351 YY++
17240213-C-T 15128333-C-T ZS11729 YY++
15551596-C-A 13439716-C-A YFS230976 Y41039 YY++
14356061-C-A 12235356-C-A YFS230971 Y40477 YY++
14116023-C-T 11995317-C-T YFS230969 Y65968 YY++
14031666-CT-C 11910960-CT-C 10×T***+
22677271-G-A 20515385-G-A YFS231069 Y43897 YY++
13450358-CT-C 11294682-CT-C *
8143191-G-A 8275150-G-A YY****
22426120-C-T 20264234-C-T DYZ19 ****
8768551-G-A 8900510-G-A **
8977862-G-A 9140253-G-A **
7735113-T-C 7867072-T-C **
17313423-C-A 15201543-C-A **
17181532-C-A 15069652-C-A **
8976598-A-G 9138989-A-G **
9120101-C-A **
8879621-G-A 9011580-G-A **
7990927-A-G 8122886-A-G **
8850378-A-T 8982337-A-T **
8768554-C-G 8900513-C-G **
8768550-A-C 8900509-A-C **
8244006-C-A 8375965-C-A **
8661210-C-A 8793169-C-A Y39702 **
8637554-C-A 8769513-C-A **
17029204-C-A 14917324-C-A **
17061797-G-T 14949917-G-T **
8008889-C-A 8140848-C-A **
8431758-C-A 8563717-C-A **
17104264-C-A 14992384-C-A **
8085309-C-T 8217268-C-T **
8109777-A-ACTC 8241736-A-ACTC **
17181522-C-A 15069642-C-A **
8384637-G-T 8516596-G-T **
8389759-T-A 8521718-T-A **
56854399-A-G **
9079319-G-T 9241710-G-T **
16813962-T-C 14702082-T-C **
9952252-T-C 10114643-T-C **
9956364-T-TAAAA 10118755-T-TAAAA 16×A**
9956421-G-GA 10118812-G-GA 9×A**
9965023-A-C 10127414-A-C **
9987586-C-A 10149977-C-A **
9989999-G-T 10152390-G-T **
9994909-A-G 10157300-A-G **
10024429-C-A 10186820-C-A **
9928079-C-A 10090470-C-A **
10038408-T-C 10200799-T-C **
10051323-C-A 10213714-C-A **
10079612-G-T 10242003-G-T **
10652531-A-T **
10661150-T-C **
10661251-C-A **
10671545-C-CCTTCA **
9940208-C-A 10102599-C-A **
16848606-C-A 14736726-C-A **
9088908-A-G 9251299-A-G **
9427890-A-G 9590281-A-G **
7705145-C-A 7837104-C-A **
16974328-G-T 14862448-G-T **
9133695-C-A 9296086-C-A **
9153073-C-T 9315464-C-T **
9306681-C-A 9469072-C-A **
9377964-A-C 9540355-A-C **
16938648-C-A 14826768-C-A **
16876975-C-A 14765095-C-A **
9887118-G-T 10049509-G-T **
9745890-C-T 9908281-C-T **
9820592-G-A 9982983-G-A **
9820595-T-C 9982986-T-C **
9820596-G-A 9982987-G-A **
9820603-A-G 9982994-A-G **
9822722-C-A 9985113-C-A **
9828680-T-A 9991071-T-A **
9873658-C-A 10036049-C-A **
7719580-C-T 7851539-C-T **
7325699-G-T 7457658-G-T **
7382502-CA-C 7514461-CA-C **
5274974-C-A 5406933-C-A **
4995471-C-A 5127430-C-A **
5011429-A-G 5143388-A-G **
5011501-C-A 5143460-C-A **
5022334-G-T 5154293-G-T **
5204574-G-T 5336533-G-T **
5267021-A-G 5398980-A-G **
5367628-T-C 5499587-T-C **
4671767-C-A 4803726-C-A **
5586560-T-C 5718519-T-C **
5620843-C-A 5752802-C-A **
5674305-C-A 5806264-C-A **
5693456-C-A 5825415-C-A **
5861563-A-C 5993522-A-C **
5864035-C-A 5995994-C-A **
5940390-T-C 6072349-T-C **
4922811-G-T 5054770-G-T **
4568298-G-T 4700257-G-T **
5998801-C-A 6130760-C-A **
3732685-C-A 3864644-C-A **
2909050-G-A 3041009-G-A **
3078567-G-T 3210526-G-T **
3112360-C-A 3244319-C-A **
3218583-C-A 3350542-C-A **
3218721-T-C 3350680-T-C **
3374264-G-T 3506223-G-T **
3375311-A-G 3507270-A-G **
3818091-C-A 3950050-C-A **
4544868-G-T 4676827-G-T **
3827905-C-CT 3959864-C-CT **
3830968-C-A 3962927-C-A **
3836969-T-C 3968928-T-C **
17334005-C-T 15222125-C-T **
3857009-A-C 3988968-A-C **
4062745-C-A 4194704-C-A **
4094198-GA-G 4226157-GA-G **
5967555-T-G 6099514-T-G **
6096400-C-A 6228359-C-A **
7364002-G-A 7495961-G-A **
7196531-C-A 7328490-C-A **
7080702-A-G 7212661-A-G **
7091360-A-G 7223319-A-G **
17318893-C-A 15207013-C-A **
7143916-A-C 7275875-A-C **
7179849-C-A 7311808-C-A **
7185500-C-T 7317459-C-T **
7195151-C-A 7327110-C-A **
7222013-C-A 7353972-C-A **
6977612-G-T 7109571-G-T **
7225688-G-T 7357647-G-T **
17318792-C-A 15206912-C-A **
7281091-G-A 7413050-G-A **
7288260-C-A 7420219-C-A **
7302546-G-T 7434505-G-T **
10684934-T-C **
7355937-T-C 7487896-T-C **
7079280-C-T 7211239-C-T **
17325441-G-A 15213561-G-A **
6096906-C-A 6228865-C-A **
6626957-C-A 6758916-C-A **
6183259-A-T 6315218-A-T IR3_Dst **
6245757-C-T 6377716-C-T IR3_Dst **
6352044-G-T 6484003-G-T **
6392160-G-T 6524119-G-T **
6402462-C-T 6534421-C-T **
6479192-G-C 6611151-G-C **
6510624-A-AT 6642583-A-AT **
6682309-G-T 6814268-G-T **
6917038-C-A 7048997-C-A **
6689845-T-A 6821804-T-A **
17333985-T-C 15222105-T-C **
6744646-C-A 6876605-C-A **
6769032-C-A 6900991-C-A **
6775959-C-A 6907918-C-A **
6808652-T-C 6940611-T-C Y82591 **
6868963-G-T 7000922-G-T **
10684914-G-T **
10769962-A-G **
10684939-T-A **
14431733-C-A 12311006-C-A **
14285918-C-A 12165212-C-A **
14312156-C-A 12191450-C-A **
16095165-A-G 13983285-A-G **
14349300-C-A 12228595-C-A **
14363443-T-A 12242738-T-A **
16067120-A-G 13955240-A-G **
16005597-G-A 13893717-G-A **
14263216-ACTTTCATAAGAGTAGAGTCTAACAAGACAT-A 12142510-ACTTTCATAAGAGTAGAGTCTAACAAGACAT-A **
14448387-A-G 12327660-A-G F18954 **
14486130-C-A 12365399-C-A **
15944273-C-A 13832393-C-A **
14549709-C-A 12437910-C-A **
14553225-C-A 12441426-C-A **
14623569-C-A 12511767-C-A **
14270496-C-A 12149790-C-A **
14253808-G-T 12133102-G-T **
14639295-C-A 12527364-C-A **
13981576-G-T 11860870-G-T **
16271125-T-G 14159245-T-G **
16241777-A-T 14129897-A-T **
16220706-C-A 14108826-C-A **
13871330-C-A 11750624-C-A **
13935575-C-A 11814869-C-A **
13959905-C-A 11839199-C-A **
14021106-C-A 11900400-C-A **
14250090-A-G 12129384-A-G **
14027320-A-G 11906614-A-G **
14100471-C-A 11979765-C-A **
16172250-C-A 14060370-C-A **
16171153-A-G 14059273-A-G **
14224148-C-A 12103442-C-A **
14246952-CA-C 12126246-CA-C **
14636278-C-A 12524347-C-A **
14649620-G-T 12537685-G-T **
16321775-G-A 14209895-G-A **
15452252-C-G 13340372-C-G **
15347188-T-G 13235307-T-G **
15379259-C-A 13267379-C-A **
15381727-C-A 13269847-C-A **
15410882-C-A 13299002-C-A **
15434307-A-T 13322427-A-T **
15451635-A-C 13339755-A-C **
15486063-C-T 13374183-C-T **
15315342-A-T 13203447-A-T **
15500585-C-T 13388705-C-T **
15507847-C-A 13395967-C-A **
15533696-C-A 13421816-C-A **
15579550-C-A 13467670-C-A **
15843237-C-A 13731357-C-A **
15710289-C-A 13598409-C-A **
15347178-T-G 13235297-T-G **
15259214-C-A 13147298-C-A **
14652341-C-A 12540406-C-A **
15901384-T-C 13789504-T-C **
14658363-C-A 12546428-C-A **
14691810-T-G 12579876-T-G **
14711484-C-A 12599551-C-A **
14711717-C-A 12599784-C-A **
14778951-CA-C 12667021-CA-C 8×A**
14946617-C-A 12834691-C-A **
15011529-C-A 12899617-C-A **
15173750-A-G 13061836-A-G **
15049284-C-A 12937375-C-A **
15057345-C-A 12945437-C-A **
15057671-A-G 12945763-A-G **
15070551-G-T 12958642-G-T **
15111732-C-A 12999819-C-A **
15122349-T-C 13010436-T-C **
15126194-C-A 13014281-C-A **
13799948-A-G 11679242-A-G **
16379164-C-A 14267284-C-A **
10684943-A-T **
10888392-CA-C **
10836584-A-ACTTC **
10836595-A-T **
10837198-T-C **
10845203-C-A **
10878418-C-A **
10880783-C-A **
10935553-A-ATTCCT **
10824226-C-A **
10949963-T-C **
10950387-C-T **
10951742-C-A **
10961411-C-A **
16676552-C-A 14564672-C-A **
11003703-C-A **
10836581-C-CT **
10816607-C-A **
11015155-C-T **
10755088-A-T **
10684949-T-C **
10684956-C-T **
10685009-C-T **
10747884-C-A **
16799464-C-A 14687584-C-A **
10754061-A-T **
10763015-C-A **
10808128-C-A **
17334006-A-G 15222126-A-G **
10773946-G-T **
16705516-G-T 14593636-G-T **
16701626-C-A 14589746-C-A **
16678715-C-A 14566835-C-A **
10799603-T-TCTTCC **
10808116-C-A **
11013269-A-G **
11015162-T-C **
11653566-C-A **
16422086-G-T 14310206-G-T **
13475143-C-A 11319467-C-A **
16492409-C-A 14380529-C-A **
13483745-T-A 11328069-T-A **
16492360-C-A 14380480-C-A **
13484056-T-C 11328380-T-C **
16478268-T-A 14366388-T-A **
16422075-G-T 14310195-G-T **
16507110-C-A 14395230-C-A **
13637269-C-T 11481593-C-T FGC10213 **
16400060-A-T 14288180-A-T **
13644127-T-A 11488451-T-A **
13681044-C-A 11525368-C-A **
16379615-G-T 14267735-G-T **
11649352-G-T **
13474093-ACT-C 11318417-ACT-C **
16541142-C-T 14429262-C-T **
11029174-C-A **
13255909-G-A 11100233-G-A **
13221918-G-A 11066242-G-A **
13224847-C-A 11069171-C-A **
13255891-C-T 11100215-C-T **
13255897-T-G 11100221-T-G **
13255898-GC-G 11100222-GC-G **
13255907-A-C 11100231-A-C **
13255921-C-T 11100245-C-T **
16555178-C-A 14443298-C-A **
13255922-C-G 11100246-C-G **
13282245-T-A 11126569-T-A **
13304922-C-A 11149246-C-A **
13320148-G-A 11164472-G-A **
13322141-C-A 11166465-C-A **
16605588-C-A 14493708-C-A **
16593740-T-C 14481860-T-C **
2817003-C-A 2948962-C-A **
17885575-C-A 15773695-C-A **
2763751-C-T 2895710-C-T **
20918247-A-ATATTTTATCCCC 18756361-A-ATATTTTATCCCC P4_Dst **
15290954-AT-A 13179053-AT-A 17×T**
19414934-T-G 17303054-T-G **
22499854-G-A 20337968-G-A DYZ19 **
19460548-T-C 17348668-T-C **
19479193-C-A 17367313-C-A **
19849293-C-A 17737413-C-A P5_Prx **
13255920-A-C 11100244-A-C **
20028055-T-C 17916175-T-C P5_Prx **
26123230-T-TA 23977083-T-TA P1_Y1 14×A**
20340735-A-G 18178849-A-G P5_Dst **
20352211-T-C 18190325-T-C P5_Dst **
20500942-GAAAA-G 18339056-GAAAA-G P5_Dst 15×A**
20690130-G-T 18528244-G-T P4_Prx **
20713106-A-T 18551220-A-T P4_Prx **
20918250-A-G 18756364-A-G P4_Dst **
5415318-CTATG-C 5547277-CTATG-C **
20918253-G-A 18756367-G-A P4_Dst **
21088914-G-A 18927028-G-A **
21137687-T-C 18975801-T-C **
21147946-C-A 18986060-C-A **
21189979-C-A 19028093-C-A **
21202291-G-T 19040405-G-T **
21220281-A-C 19058395-A-C **
21307284-C-A 19145398-C-A **
21394927-C-T 19233041-C-T **
21407869-C-A 19245983-C-A **
21490914-C-A 19329028-C-A **
21514113-C-A 19352227-C-A **
21546228-C-A 19384342-C-A **
17934015-G-A 15822135-G-A CTS8324 ****
3800075-CCA-C 3932034-CCA-C 8×CA**
6420653-A-G 6552612-A-G **
21583846-C-A 19421960-C-A **
19280846-G-T 17168966-G-T **
10069885-G-A 10232276-G-A **
14458489-T-A 12337762-T-A **
7132051-C-A 7264010-C-A **
18974448-C-A 16862568-C-A **
13485534-A-T 11329858-A-T **
18979312-C-A 16867432-C-A **
2744820-C-A 2876779-C-A **
19040886-C-T 16929006-C-T **
19042948-A-T 16931068-A-T **
19062106-C-A 16950226-C-A **
19107385-C-T 16995505-C-T **
19107499-A-C 16995619-A-C **
19223267-T-A 17111387-T-A **
19275149-G-GTA 17163269-G-GTA 8×TA**
13476140-C-A 11320464-C-A **
15291000-A-T 13179099-A-T **
28776111-C-A 26629964-C-A **
18801280-A-T 16689400-A-T **
4031513-CAA-C 4163472-CAA-C 16×A**
7775042-C-A 7907001-C-A **
3790878-G-A 3922837-G-A 21×TA**
15658067-T-TAC 13546187-T-TAC 9×AC**
16598982-AAC-A 14487102-AAC-A **
58977400-C-A 56831253-C-A **
19853711-C-A 17741831-C-A P5_Prx **
59008508-C-T 56862361-C-T **
59026639-G-C 56880492-G-C **
19370117-C-A 17258237-C-A **
58988964-A-C 56842817-A-C **
24283310-T-G 22137163-T-G P3_t1 **
19339406-C-A 17227526-C-A **
21549344-C-A 19387458-C-A **
21651708-A-G 19489822-A-G **
10069895-C-T 10232286-C-T **
28558776-C-A 26412629-C-A **
24583337-TG-T 22437190-TG-T P3_t2 **
26078858-A-G 23932711-A-G P1_Y1 **
10022008-G-A 10184399-G-A K160 **
26124626-G-A 23978479-G-A P1_Y1 **
26124628-AG-A 23978481-AG-A P1_Y1 **
26699360-T-C 24553213-T-C P1_g2 **
27583192-T-C 25437045-T-C P1_Y2 **
27808622-G-A 25662475-G-A P1_Y2 **
27870111-G-T 25723964-G-T P1_Y2 **
27870132-T-TG 25723985-T-TG P1_Y2 **
28033130-A-AG 25886983-A-AG P1_Y2 **
28482874-C-A 26336727-C-A **
28484207-C-A 26338060-C-A **
28500806-CTTTTTTT-C 26354659-CTTTTTTT-C 18×T**
28594225-C-A 26448078-C-A **
24523593-C-CAA 22377446-C-CAA 13×A**
28708937-C-A 26562790-C-A **
56842832-C-T **
56831414-C-CATTCT **
28761218-C-CA 26615071-C-CA **
28733420-T-C 26587273-T-C **
28733389-G-T 26587242-G-T **
28726596-A-G 26580449-A-G **
28703435-C-A 26557288-C-A **
28645777-C-A 26499630-C-A **
28688013-C-A 26541866-C-A **
21980001-C-A 19818115-C-A 27×A**
28687892-A-G 26541745-A-G **
28687405-G-T 26541258-G-T **
13855604-A-T 11734898-A-T **
28653865-C-A 26507718-C-A **
2873905-C-A 3005864-C-A **
24359539-C-A 22213392-C-A **
21651717-G-A 19489831-G-A **
23006777-AAGGG-A 20844891-AAGGG-A **
21668681-T-C 19506795-T-C **
21738612-G-T 19576726-G-T **
21775290-C-A 19613404-C-A **
21793528-A-C 19631642-A-C **
21890998-C-A 19729112-C-A **
21998966-T-G 19837080-T-G **
22001950-C-A 19840064-C-A **
22089007-G-A 19927121-G-A **
22210676-C-A 20048790-C-A **
22517062-C-A 20355176-C-A **
22800698-A-T 20638812-A-T **
22845837-C-A 20683951-C-A **
22856237-G-T 20694351-G-T **
22951385-C-A 20789499-C-A **
23187826-C-A 21025940-C-A **
24310308-T-TAC 22164161-T-TAC P3_t1 **
23625570-C-A 21463684-C-A **
10024358-T-C 10186749-T-C PF6816 **
24003238-C-A 21857091-C-A **
23875710-C-A 21713824-C-A **
23808062-C-T 21646176-C-T **
23745558-G-T 21583672-G-T **
23638712-T-C 21476826-T-C **
23623548-G-T 21461662-G-T **
23193246-C-A 21031360-C-A **
23465879-C-T 21303993-C-T **
23412024-C-A 21250138-C-A **
23373441-T-C 21211555-T-C **
23317685-TTG-T 21155799-TTG-T **
23204326-C-A 21042440-C-A **
23202297-G-T 21040411-G-T **
10069893-A-G 10232284-A-G **
19024844-G-A 16912964-G-A **
10069897-C-T 10232288-C-T **
17646690-C-A 15534810-C-A **
19417388-C-A 17305508-C-A **
18682595-C-G 16570715-C-G **
2855467-ATTT-A 2987426-ATTT-A 16×T**
14798638-C-A 12686709-C-A **
2814992-C-T 2946951-C-T **
18930703-C-A 16818823-C-A **
18174534-C-A 16062654-C-A **
22113169-C-A 19951283-C-A **
10770448-A-T **
28784540-C-A 26638393-C-A **
26046017-C-T 23899870-C-T P1_Y1 **
7623603-C-A 7755562-C-A **
17716661-C-A 15604781-C-A **
14630276-C-A 12518345-C-A **
10770434-T-A **
17803249-C-A 15691369-C-A **
13453392-T-TCAATA 11297716-T-TCAATA **
15823910-C-A 13712030-C-A **
17952623-C-CTT 15840743-C-CTT 16×T**
13453399-C-T 11297723-C-T **
20611311-G-T 18449425-G-T P5_Dst **
11022857-T-C **
13884251-C-A 11763545-C-A **
17922443-G-T 15810563-G-T **
9956461-C-A 10118852-C-A **
17865456-C-A 15753576-C-A **
18017116-TA-T 15905236-TA-T **
21477083-G-T 19315197-G-T **
17871014-A-G 15759134-A-G **
17834398-G-C 15722518-G-C **
17774974-G-T 15663094-G-T **
23465889-G-T 21304003-G-T **
10658512-T-A **
17538595-G-T 15426715-G-T **
18682591-A-G 16570711-A-G **
16047183-C-A 13935303-C-A **
16705551-C-A 14593671-C-A **
7753087-C-A 7885046-C-A **
17334016-G-A 15222136-G-A **
10951718-T-A **
17461886-C-A 15350006-C-A **
17334008-A-G 15222128-A-G **
56832750-A-G **
15741808-C-A 13629928-C-A **
17346446-C-A 15234566-C-A **
19507296-C-A 17395416-C-A **
2665866-C-A 2797825-C-A **
2683430-C-T 2815389-C-T **
2683454-G-A 2815413-G-A **
2683461-C-T 2815420-C-T Y44733 **
2724709-C-A 2856668-C-A **
14635788-C-A 12523857-C-A **
17425106-C-A 15313226-C-A **
9194475-C-A 9356866-C-A **
17464809-C-T 15352929-C-T **
21049325-C-A 18887439-C-A **
14528325-C-A 12416526-C-A **
17477152-C-A 15365272-C-A **
14462728-C-A 12342001-C-A **
14043818-A-T 11923112-A-T **
7197315-C-A 7329274-C-A **
20021531-C-T 17909651-C-T P5_Prx **
23446811-C-A 21284925-C-A **
18102015-C-A 15990135-C-A **
17362665-T-C 15250785-T-C **
20757284-CTTTT-C 18595398-CTTTT-C P4_Prx 26×T**
56842797-C-G **
10757953-T-C **
16275451-C-A 14163571-C-A **
10016002-C-A 10178393-C-A **
17928936-A-T 15817056-A-T **
10935534-T-A **
13476136-C-T 11320460-C-T **
56835253-C-T **
18423887-C-CAA 16312007-C-CAA P6_Gap 15×A**
10821953-A-AGTTTG **
28656955-C-A 26510808-C-A **
10799638-T-A **
18242018-C-T 16130138-C-T **
18389146-C-T 16277266-C-T P6_Gap **
18695859-C-A 16583979-C-A **
18703134-T-A 16591254-T-A **
18756409-C-A 16644529-C-A **
17544702-C-A 15432822-C-A **
14495831-GGTGT-G 12384028-GGTGT-G 17×GT**
18766619-A-C 16654739-A-C **
10954379-T-A **
8244031-C-A 8375990-C-A **
18816881-C-G 16705001-C-G **
16039351-C-A 13927471-C-A **
7371880-C-A 7503839-C-A **
10799619-C-A **
14468403-T-TA 12347672-T-TA 10×A**
10814463-T-TATTCC **
18945386-T-C 16833506-T-C **
11030161-TCCAATCCAT-C **
23315946-A-T 21154060-A-T **
17622755-C-CA 15510875-C-CA 11×A**
10958437-A-G **
18933750-C-A 16821870-C-A **
18907995-TACAC-T 16796115-TACAC-T 8×AC**
10807040-C-T **
18865153-C-A 16753273-C-A **
10958433-G-T **
10958436-T-G **
7317137-C-A 7449096-C-A **
16052064-C-A 13940184-C-A **
14761311-C-A 12649380-C-A **
18022281-A-G 15910401-A-G **
9987597-C-A 10149988-C-A **
14821748-C-A 12709815-C-A **
17929171-C-A 15817291-C-A **
9440294-C-A 9602685-C-A **
7374974-G-T 7506933-G-T **
10807037-G-C **
11015144-G-C **
21363090-CAAA-C 19201204-CAAA-C 16×A**
10834211-A-C **
10949893-C-T **
15967643-C-A 13855763-C-A **
17929175-A-T 15817295-A-T **
17945362-A-G 15833482-A-G **
15789663-T-C 13677783-T-C **
10836533-C-G **
10666919-C-G **
9377965-C-A 9540356-C-A **
13705485-G-A 11549809-G-A **
20690179-T-TC 18528293-T-TC P4_Prx **
18174934-T-C 16063054-T-C **
7152629-C-A 7284588-C-A **
13194390-C-A 11038714-C-A **
11645406-T-A **
56832477-C-A ***
21382170-C-A 19220284-C-A ***
24005210-CT-C 21859063-CT-C 9×T***
56832489-T-C ***
56833423-A-G ***
21291247-C-A 19129361-C-A ***
23817827-G-A 21655941-G-A ***
21267584-C-A 19105698-C-A ***
24001481-C-A 21855334-C-A ***
18093013-AG-A 15981133-AG-A ***
18906125-C-A 16794245-C-A ***
23522359-A-T 21360473-A-T ***
16643107-G-T 14531227-G-T ***
19088592-A-G 16976712-A-G ***
16936204-G-A 14824324-G-A ***
28658703-C-A 26512556-C-A ***
19123416-C-A 17011536-C-A ***
28586444-G-T 26440297-G-T ***
17672903-C-A 15561023-C-A ***
18097760-C-A 15985880-C-A ***
16704047-C-A 14592167-C-A ***
20516379-G-T 18354493-G-T P5_Dst ***
16176510-C-A 14064630-C-A ***
19322432-C-A 17210552-C-A ***
13801197-T-A 11680491-T-A ***
15728653-C-A 13616773-C-A ***
13839738-C-A 11719032-C-A FGC47509 ***
13869350-G-C 11748644-G-C ***
13869349-A-C 11748643-A-C ***
13869343-T-A 11748637-T-A ***
13865954-T-A 11745248-T-A ***
13862640-G-C 11741934-G-C ***
13856390-A-G 11735684-A-G ***
13845621-A-G 11724915-A-G ***
13842628-G-A 11721922-G-A ***
13839825-G-A 11719119-G-A ***
13838291-G-A 11717585-G-A ***
13869375-G-A 11748669-G-A ***
13838280-T-A 11717574-T-A ***
13838254-A-G 11717548-A-G ***
13805306-A-C,T 11684600-A-C,T ***
13803206-T-C 11682500-T-C ***
13803199-A-T 11682493-A-T ***
13803192-G-A 11682486-G-A ***
13803188-G-T 11682482-G-T ***
13803187-C-T 11682481-C-T ***
13714026-C-A 11558350-C-A ***
13714024-C-T 11558348-C-T ***
13869358-T-G 11748652-T-G ***
19948183-T-C 17836303-T-C P5_Prx ***
13714019-A-ATGGAC 11558343-A-ATGGAC ***
58819383-C-T 56771488-G-A ***
13478985-C-T 11323309-C-T ***
22508558-G-T 20346672-G-T DYZ19 ***
58978195-C-G 56832048-C-G ***
58975684-T-A 56829537-T-A ***
58975682-C-G 56829535-C-G ***
58975669-T-G 56829522-T-G ***
58975668-A-C 56829521-A-C ***
58975654-G-GTCCATTCCAT 56829507-G-GTCCATTCCAT 4×TCCAT***
58973179-A-C 56827032-A-C ***
58819448-G-C 56771423-C-G ***
27883548-T-C 25737401-T-C P1_Y2 ***
20030361-C-G 17918481-C-G P5_Prx ***
25997597-CA-C 23851450-CA-C P1_Y1 10×A***
25934375-TAA-T 23788228-TAA-T P1_Y1 17×A***
25445990-A-AT 23299843-A-AT P2_r2 17×T***
25323281-C-T 23177134-C-T P2_r1 ***
24916442-A-AT 22770295-A-AT g1 8×T***
22299829-C-A 20137943-C-A DYZ19 ***
22299328-C-T 20137442-C-T DYZ19 ***
22299323-C-G 20137437-C-G DYZ19 ***
22222499-G-A 20060613-G-A DYZ19 ***
20750710-CT-C 18588824-CT-C P4_Prx 10×T***
13714021-G-C 11558345-G-C ***
13700120-C-G 11544444-C-G ***
15612143-CAT-C 13500263-CAT-C ***
13868389-T-C 11747683-T-C 4×GGAAC***
25858396-GA-G 23712249-GA-G P1_Y1 22×A***
13845619-A-T 11724913-A-T ***
13803171-T-A 11682465-T-A ***
13812837-GAATGC-G 11692131-GAATGC-G ***
26189760-G-GT 24043613-G-GT P1_Y1 21×T***
13858600-T-A,G 11737894-T-A,G ***
13838244-A-G 11717538-A-G ***
24296211-A-G 22150064-A-G P3_t1 ***
28786701-G-GTGGAA 26640554-G-GTGGAA ***
13459479-C-G 11303803-C-G ***
13449372-C-CTCCACTCCAG 11293696-C-CTCCACTCCAG ***
13813509-A-C 11692803-A-C ***
58844660-G-C 56746211-C-G ***
13808023-T-A 11687317-T-A ***
13804717-A-G 11684011-A-G ***
13649029-A-G 11493353-A-G ***
13852116-G-A 11731410-G-A ***
13821187-T-A 11700481-T-A ***
13813544-A-C 11692838-A-C ***
13452970-A-C 11297294-A-C ***
58973140-T-A 56826993-T-A ***
13862234-T-A 11741528-T-A ***
13143780-CACTGCACTGCACATCACTCT-C 10633266-CACTGCACTGCACATCACTCT-C ***
28786716-A-G 26640569-A-G ***
13699435-T-G 11543759-T-G ***
13142168-G-A 10631654-G-A ***
13676756-A-G 11521080-A-G ***
13676755-C-G 11521079-C-G ***
13664524-G-T 11508848-G-T ***
13459371-G-C 11303695-G-C ***
13459203-T-C 11303527-T-C ***
13455703-T-C 11300027-T-C ***
13454233-A-T 11298557-A-T ***
13452925-A-G 11297249-A-G ***
13447544-C-T 11291868-C-T ***
13143779-C-T 10633265-C-T ***
13141840-A-T 10631326-A-T ***
58819377-C-T 56771494-G-A ***
9978404-C-A 10140795-C-A ***
9654352-T-A 9816743-T-A IR3_Prx 10×AGAA***
8600023-C-T 8731982-C-T ***
13846584-G-C 11725878-G-C ***
13866042-A-G 11745336-A-G ***
58844655-G-C 56746216-C-G ***
13838257-G-A 11717551-G-A ***
13808134-A-T 11687428-A-T ***
13489696-C-A 11334020-C-A ***
58975378-A-T 56829231-A-T ***
13456091-A-C 11300415-A-C ***
6523536-T-A 6655495-T-A BY25991 ***
15655699-C-A 13543819-C-A ***
9730304-G-T 9892695-G-T IR3_Prx ***
10971286-A-T ***
10789365-C-CA ***
10789364-C-CTGGTTCGTT ***
10789350-C-CAGTCGGGTTG ***
10789339-C-T ***
10753976-A-T ***
10012696-C-A 10175087-C-A ***
9907670-G-T 10070061-G-T ***
9730316-G-T 9892707-G-T IR3_Prx ***
9424366-G-A 9586757-G-A ***
13450235-C-T 11294559-C-T ***
9111584-G-T 9273975-G-T ***
8566698-C-A 8698657-C-A ***
13862226-G-A 11741520-G-A ***
8431403-C-A 8563362-C-A ***
8385380-C-A 8517339-C-A ***
7941791-C-A 8073750-C-A ***
7911158-C-A 8043117-C-A ***
7233238-C-A 7365197-C-A ***
7106205-G-A 7238164-G-A ***
6971036-C-A 7102995-C-A ***
13328933-C-A 11173257-C-A ***
13452743-CTCCATTCCAC-C,CTCCATTCCAG 11297067-CTCCATTCCAC-C,CTCCATTCCAG ***
3849553-C-T 3981512-C-T ***
13804223-A-G 11683517-A-G ***
15001504-C-A 12889589-C-A ***
14513535-C-A 12401740-C-A ***
14439190-C-A 12318463-C-A ***
14415689-C-A 12294986-C-A ***
14313468-C-A 12192762-C-A ***
14109316-CTTT-C 11988610-CTTT-C 14×T***
14103180-T-C 11982474-T-C ***
13988786-T-C 11868080-T-C ***
13831598-G-T 11710892-G-T ***
13804424-G-T 11683718-G-T ***
13799226-A-G 11678520-A-G ***
13457803-T-G 11302127-T-G ***
11671304-T-C ***
13696329-C-A 11540653-C-A ***
13643189-C-A 11487513-C-A ***
13610966-C-A 11455290-C-A ***
13601940-C-A 11446264-C-A ***
13575942-C-A 11420266-C-A ***
13483954-G-T 11328278-G-T ***
13476654-G-C 11320978-G-C ***
13458713-C-A 11303037-C-A 9×TCCAT***
13457806-C-G 11302130-C-G ***
6694097-C-A 6826056-C-A ***
2811562-C-A 2943521-C-A ***
58974855-C-T 56828708-C-T ***
20810696-CTT-C,CT 18648810-CTT-C,CT P4_Gap 16×T***
13457732-A-T 11302056-A-T ***
10926563-T-C ***
19411175-TAA-T 17299295-TAA-T 13×A***
13448198-TCCATT-T,TCCATC 11292522-TCCATT-T,TCCATC ***
8119053-GTT-G 8251012-GTT-G 16×T***
13489803-C-T 11334127-C-T ***
14529234-CA-C,CAA 12417435-CA-C,CAA 15×A***
13457745-C-T 11302069-C-T ***
58978878-C-T 56832731-C-T ***
13457765-C-G 11302089-C-G ***
13869387-G-A,T 11748681-G-A,T ***
10911584-C-A ***
13869330-A-C,G 11748624-A-C,G ***
13450115-C-G,T 11294439-C-G,T ***
13869404-CGAATG-A,C 11748698-CGAATG-A,C 9×GAATG***
13869401-T-A,C 11748695-T-A,C ***
13457805-C-A 11302129-C-A ***
24503106-CAA-C 22356959-CAA-C 16×A***
58979592-C-A 56833445-C-A ***
13860032-C-A 11739326-C-A ***
9524019-GTATATATATATATATATATATATA-G 9686410-GTATATATATATATATATATATATA-G 21×TA***
8452192-C-CA 8584151-C-CA 15×A***
14716648-C-A 12604716-C-A ***
13811122-T-A 11690416-T-A ***
56831388-C-CTTTTCCACTT ***
22588006-C-A 20426120-C-A ***
14098644-C-A 11977938-C-A ***
15340585-C-A 13228704-C-A ***
19011120-C-A 16899240-C-A ***
10971294-T-C ***
10801665-T-A ***
7035173-C-A 7167132-C-A ***
13463776-G-AT 11308100-G-AT ***
8333626-ACTTCTTCTT-A,ACTT 8465585-ACTTCTTCTT-A,ACTT 25×CTT***
14349375-C-A 12228670-C-A ***
13485582-C-T 11329906-C-T ***
13446747-T-A 11291071-T-A ***
56832509-C-A ***
5204877-TAA-T 5336836-TAA-T 14×A***
10971287-T-C ***
13860034-G-C 11739328-G-C ***
10789375-C-T ***
17678664-T-C 15566784-T-C ***
13485589-T-A 11329913-T-A ***
13457791-C-T 11302115-C-T ***
13485599-C-T 11329923-C-T ***
10753971-T-A ***
10753969-C-G ***
8514261-G-A 8646220-G-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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