Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > S1051 > FGC9655 > FGC17938 > FGC29516

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
UTU7E
13888516-G-A 11767810-G-A FGC41191 YY+
9863545-T-C 10025936-T-C FGC41186 YY+
16619917-C-T 14508037-C-T FGC29532 Y+
15927862-C-T 13815982-C-T FGC29529 YY+
21651671-A-C 19489785-A-C FGC41183 YY+
14742870-A-C 12630938-A-C FGC41192 Y+
28534303-G-A 26388156-G-A FGC29549 Y+
13563805-A-T 11408129-A-T FGC41188 +
13443338-A-G 11287662-A-G FGC41187 +
8459683-C-A 8591642-C-A FGC41185 YY+
17367717-G-A 15255837-G-A FGC29535 YY+
6093286-CA-C 6225245-CA-C +
5724123-T-C 5856082-T-C FGC29513 +
5421963-G-T 5553922-G-T FGC29512 +
5403533-G-A 5535492-G-A FGC29511 +
4671785-G-T 4803744-G-T FGC29509 +
4613169-A-G 4745128-A-G FGC41184 +
3483538-T-C 3615497-T-C FGC29506 +
16702762-A-G 14590882-A-G FGC41193 Y+
3810051-T-C 3942010-T-C FGC29507 +
13858515-G-A 11737809-G-A FGC33576 +
25590945-T-C 23444798-T-C FGC41200 P1_gr1 +
23115018-C-T 20953132-C-T FGC41197 YY+
21120335-G-C 18958449-G-C FGC41196 Y+
28554278-C-T 26408131-C-T FGC41182 *
26178106-TG-T 24031959-TG-T P1_Y1 *
24183766-G-T 22037619-G-T FGC41198 P3_b1 *
3958109-C-T 4090068-C-T FGC29508 *
18230839-A-T 16118959-A-T **
21913652-T-C 19751766-T-C **
9784408-A-G 9946799-A-G **
9784359-A-T 9946750-A-T **
21630462-T-G 19468576-T-G **
15459604-C-CA 13347724-C-CA 10×A**
7060714-G-A 7192673-G-A **
21944717-A-G 19782831-A-G **
6901434-C-T 7033393-C-T **
8660550-CAAAAAAA-C 8792509-CAAAAAAA-C 18×A**
13393449-ATT-A 11237773-ATT-A 12×T**
13339155-C-T 11183479-C-T **
23172184-T-A 21010298-T-A **
4289152-A-T 4421111-A-T **
22360928-G-T 20199042-G-T DYZ19 **
4219219-A-T 4351178-A-T **
21630459-G-A 19468573-G-A **
24747997-A-T 22601850-A-T P3_b2 **
21538485-G-A 19376599-G-A **
15301004-C-T 13189103-C-T **
17900543-C-G 15788663-C-G **
17797498-G-A 15685618-G-A **
18795612-C-T 16683732-C-T **
25339552-A-T 23193405-A-T P2_r1 **
15628173-C-T 13516293-C-T **
15628172-C-T 13516292-C-T **
21058765-C-G 18896879-C-G **
15149657-G-A 13037744-G-A **
13485894-C-G 11330218-C-G **
15149650-A-T 13037737-A-T **
15149645-C-T 13037732-C-T **
15101211-A-G 12989299-A-G **
14165128-G-A 12044422-G-A **
14165119-G-A 12044413-G-A **
14165116-G-A 12044410-G-A **
21197147-C-A 19035261-C-A **
18230834-C-T 16118954-C-T **
15187323-C-T 13075409-C-T **
21576133-G-T 19414247-G-T **
27127602-ATTTCTTTCTTTCTTTC-A 24981455-ATTTCTTTCTTTCTTTC-A P1_g3 14×TTTC**
17527438-G-GTATA 15415558-G-GTATA 18×TA**
13260727-A-G 11105051-A-G **
17855340-GT-G 15743460-GT-G **
18454812-TTTC-T 16342932-TTTC-T P6_Dst **
9784558-T-A 9946949-T-A **
58855332-G-GCCTTCCATTC 56735537-T-TGGAATGGAAG 4×CATTC**
19283984-CTATGG-C 17172104-CTATGG-C 7×TATGG**
27895460-A-T 25749313-A-T P1_Y2 **
58845516-T-TC 56745353-C-CG **
20101710-A-G 17989830-A-G P5_Dst **
5028079-T-TATATAATATA 5160038-T-TATATAATATA 9×ATATA**
7175364-A-G 7307323-A-G **
24386932-ATATATATATCCCC-A 22240785-ATATATATATCCCC-A **
18230845-G-GA 16118965-G-GA **
13349125-A-G 11193449-A-G **
4911506-T-A 5043465-T-A **
3167079-C-A 3299038-C-A FGC53497 **
17154350-AT-A 15042470-AT-A **
8333499-T-C 8465458-T-C FGC8508 **
13260736-G-A 11105060-G-A **
16441973-ATA-CTC 14330093-ATA-CTC ***
26214977-T-A 24068830-T-A P1_Y1 ***
26229057-A-T 24082910-A-T P1_Y1 ***
26299047-A-T 24152900-A-T P1_Y1 ***
26310780-C-T 24164633-C-T P1_Y1 ***
58823350-T-TG 56767520-G-GC ***
26059919-C-A 23913772-C-A P1_Y1 ***
26138155-G-A 23992008-G-A P1_Y1 ***
26124625-G-A 23978478-G-A P1_Y1 ***
26022172-A-T 23876025-A-T P1_Y1 ***
25994549-G-T 23848402-G-T P1_Y1 ***
25885264-G-A 23739117-G-A P1_Y1 ***
25882228-T-G 23736081-T-G P1_Y1 ***
25881020-C-T 23734873-C-T P1_Y1 ***
58837520-CCCATT-C 56753305-CAATGG-C 9×CCATT***
25727538-C-T 23581391-C-T P1_b3 ***
25727479-T-C 23581332-T-C P1_b3 ***
25698090-A-G 23551943-A-G P1_b3 ***
25653895-C-T 23507748-C-T P1_b3 ***
25633180-G-A 23487033-G-A P1_b3 ***
28522376-CTTTTTTT-C 26376229-CTTTTTTT-C 18×T***
26477838-A-G 24331691-A-G P1_Y1 ***
28021912-T-TA 25875765-T-TA P1_Y2 17×A***
27371319-A-G 25225172-A-G P1_g3 ***
27854486-C-A 25708339-C-A P1_Y2 ***
27810905-T-C 25664758-T-C P1_Y2 ***
27692527-C-A 25546380-C-A P1_Y2 ***
27647229-T-C 25501082-T-C P1_Y2 ***
27642073-G-A 25495926-G-A P1_Y2 ***
27585944-A-G 25439797-A-G P1_Y2 ***
27585673-C-A 25439526-C-A P1_Y2 ***
27546392-A-G 25400245-A-G P1_Y2 ***
27528904-T-A 25382757-T-A P1_Y2 ***
27502862-T-C 25356715-T-C P1_Y2 ***
27500965-T-A 25354818-T-A P1_Y2 ***
27454842-T-C 25308695-T-C P1_Y2 ***
27340601-G-A 25194454-G-A P1_g3 ***
26310952-C-T 24164805-C-T P1_Y1 ***
27226928-T-A 25080781-T-A P1_g3 ***
27181809-G-A 25035662-G-A P1_g3 ***
27056202-T-A 24910055-T-A P1_r4 ***
26981193-G-A 24835046-G-A P1_r4 ***
26957125-A-T 24810978-A-T P1_r3 ***
26906288-T-A 24760141-T-A P1_r3 ***
26760164-A-G 24614017-A-G P1_g2 ***
26713751-T-A 24567604-T-A P1_g2 ***
58837622-TATC-CATT 56753246-GATA-AATG ***
26463625-A-T 24317478-A-T P1_Y1 ***
26433862-C-T 24287715-C-T P1_Y1 ***
26359203-A-T 24213056-A-T P1_Y1 ***
25610021-C-A 23463874-C-A P1_gr1 ***
25429346-G-T 23283199-G-T P2_r2 ***
25565515-A-G 23419368-A-G P1_gr1 ***
22789447-G-T 20627561-G-T ***
24102606-A-T 21956459-A-T P3_b1 ***
24096552-A-T 21950405-A-T P3_b1 ***
24014220-T-A 21868073-T-A ***
23513159-G-A 21351273-G-A ***
23425364-C-A 21263478-C-A ***
23229662-A-C 21067776-A-C ***
23226763-C-T 21064877-C-T ***
23192577-T-C 21030691-T-C ***
58889185-TGAGTCCATTCCAT-CGAG 56701673-ATGGAATGGACTCA-CTCG ***
58910688-TCATATTG-CCA 56680176-CAATATGA-TGG ***
22839286-T-A 20677400-T-A ***
22789180-A-T 20627294-A-T ***
58854627-C-CCATTG 56736239-G-GAATGC ***
22502841-C-T 20340955-C-T FGC45231 DYZ19 ***
22481550-A-C 20319664-A-C DYZ19 ***
22481314-C-A 20319428-C-A DYZ19 ***
22481239-A-C 20319353-A-C DYZ19 ***
22481226-C-A 20319340-C-A DYZ19 ***
22481005-C-A 20319119-C-A DYZ19 ***
22435717-T-A 20273831-T-A DYZ19 ***
22368387-C-G 20206501-C-G DYZ19 ***
22366524-G-C 20204638-G-C DYZ19 ***
58912872-CCATTCGA-ATATTTAC 56677992-TCGAATGG-GTAAATAT ***
22349279-G-T 20187393-G-T DYZ19 ***
22349262-G-T 20187376-G-T DYZ19 ***
58863817-CA-GATGATTG 56727053-TG-CAATCATC ***
58846524-CGTTTCA-GG 56744341-TGAAACG-CC ***
25521747-A-G 23375600-A-G P1_gr1 ***
24906799-T-A 22760652-T-A g1 ***
25505250-A-T 23359103-A-T P1_gr1 ***
25466481-T-G 23320334-T-G P2_r2 ***
25466449-T-G 23320302-T-G P2_r2 ***
25466319-G-A 23320172-G-A P2_r2 ***
25429214-T-C 23283067-T-C P2_r2 ***
25424622-C-G 23278475-C-G P2_r2 ***
58845374-TA-CG 56745496-TA-CG ***
25310454-G-T 23164307-G-T P2_r1 ***
25309486-C-T 23163339-C-T P2_r1 ***
25200170-C-A 23054023-C-A g1 ***
25029340-A-T 22883193-A-T g1 ***
24941654-C-A 22795507-C-A g1 ***
24842182-G-T 22696035-G-T P3_b2 ***
58846507-TCTGTC-T 56744358-AGACAG-A ***
24842071-T-A 22695924-T-A P3_b2 ***
24771093-G-T 22624946-G-T P3_b2 ***
24771030-G-T 22624883-G-T P3_b2 ***
24646666-A-C 22500519-A-C P3_b2 ***
24646649-T-G 22500502-T-G P3_b2 ***
24595385-A-G 22449238-A-G P3_t2 ***
24567082-A-T 22420935-A-T P3_t2 ***
24290634-G-T 22144487-G-T P3_t1 ***
24283176-T-G 22137029-T-G P3_t1 ***
24253850-T-A 22107703-T-A P3_b1 ***
24220158-C-A 22074011-C-A P3_b1 ***
24218698-T-G 22072551-T-G P3_b1 ***
27030714-CT-C 24884567-CT-C P1_r4 13×T***
27918811-C-A 25772664-C-A P1_Y2 ***
25588174-AT-A 23442027-AT-A P1_gr1 ***
5260410-C-CA 5392369-C-CA 20×A***
6928535-CTTTTT-C 7060494-CTTTTT-C 14×T***
6099384-CAAA-C 6231343-CAAA-C 17×A***
19284014-GTATGGTATGC-G 17172134-GTATGGTATGC-G ***
5572474-CTTT-C 5704433-CTTT-C 15×T***
19309444-TATATATATATATATATAC-T 17197564-TATATATATATATATATAC-T ***
5378214-G-AT 5510173-G-AT ***
5062473-CAAAAAA-C 5194432-CAAAAAA-C 21×A***
4583112-ATTC-TTTT 4715071-ATTC-TTTT ***
4375699-G-GC 4507658-G-GC ***
3970497-CT-C 4102456-CT-C ***
3259034-TCA-T 3390993-TCA-T ***
19309451-A-ATATG 17197571-A-ATATG ***
9830992-T-TA 9993383-T-TA ***
7003018-TC-CT 7134977-TC-CT ***
21119945-GA-G 18958059-GA-G ***
22337419-TAC-AGT 20175533-TAC-AGT DYZ19 ***
58914873-A-G 56675998-T-C ***
58912878-G-A 56677993-C-T ***
58908915-C-T 56681956-G-A ***
58905682-A-C 56685189-T-G ***
58904027-G-A 56686844-C-T ***
58903991-C-T 56686880-G-A ***
58894442-G-T 56696429-C-A ***
58894425-G-C 56696446-C-G ***
58891427-A-G 56699444-T-C ***
58886644-G-T 56704227-C-A ***
7003009-CAC-AAT 7134968-CAC-AAT ***
7003083-TGCCCGCC-CGCCTGCT 7135042-TGCCCGCC-CGCCTGCT ***
22267245-TTG-T 20105359-TTG-T DYZ19 ***
14025622-AAGAAAAA-GAAGAAAG 11904916-AAGAAAAA-GAAGAAAG ***
16344411-TTCTTCA-T 14232531-TTCTTCA-T ***
17275760-A-AGGGAG 15163880-A-AGGGAG ***
15628975-GCC-ACT 13517095-GCC-ACT ***
15628959-TTGCT-ATGCC 13517079-TTGCT-ATGCC ***
15628951-AT-A 13517071-AT-A ***
15628172-CC-TT 13516292-CC-TT ***
15593273-TCAA-T 13481393-TCAA-T ***
15047301-T-TA 12935392-T-TA ***
14167586-G-GA 12046880-G-GA 9×A***
14165116-GAAG-AAAA 12044410-GAAG-AAAA ***
14130925-GATATC-AATGTT 12010219-GATATC-AATGTT ***
14130883-TT-GC 12010177-TT-GC ***
17900528-CT-C 15788648-CT-C 10×T***
7545013-G-GC 7676972-G-GC ***
13730826-CGGC-TGAA 11575150-CGGC-TGAA ***
13729960-AAGTGGAATGGAATCG-A 11574284-AAGTGGAATGGAATCG-A ***
13489697-GT-AG 11334021-GT-AG ***
13463183-TAC-CAT 11307507-TAC-CAT ***
13461027-GG-CA 11305351-GG-CA ***
13454814-T-TTCCAG 11299138-T-TTCCAG ***
13454807-T-TCCTCC 11299131-T-TCCTCC ***
19006136-CAAAAAA-C 16894256-CAAAAAA-C 21×A***
13253199-GTT-G 11097523-GTT-G 14×T***
19042179-CAAAA-C 16930299-CAAAA-C 17×A***
8333496-T-TTCC 8465455-T-TTCC ***
8333490-T-TTCTTCTTCC 8465449-T-TTCTTCTTCC ***
8007323-CAG-C 8139282-CAG-C ***
21630459-GCAT-ACAG 19468573-GCAT-ACAG ***
58886610-A-C 56704261-T-G ***
27860243-A-G 25714096-A-G P1_Y2 ***
28033248-C-A 25887101-C-A P1_Y2 ***
28458089-A-G 26311942-A-G ***
28336512-T-A 26190365-T-A P1_b4 ***
28336454-G-T 26190307-G-T P1_b4 ***
28331878-G-T 26185731-G-T P1_b4 ***
28209088-C-T 26062941-C-T P1_b4 ***
28200967-C-A 26054820-C-A P1_b4 ***
28183402-G-T 26037255-G-T P1_b4 ***
28148112-G-A 26001965-G-A P1_b4 ***
28117245-G-T 25971098-G-T P1_b4 ***
28112361-C-T 25966214-C-T P1_Y2 ***
22341394-ACTTC-GTCTTG 20179508-ACTTC-GTCTTG DYZ19 ***
22349262-GTTTCC-TTTTTT 20187376-GTTTCC-TTTTTT DYZ19 ***
28032183-T-C 25886036-T-C P1_Y2 ***
28628506-A-T 26482359-A-T 14×T***
28022799-T-G 25876652-T-G P1_Y2 ***
28007212-C-A 25861065-C-A P1_Y2 ***
22481328-TTTAGG-GTTATA 20319442-TTTAGG-GTTATA DYZ19 ***
27994708-C-T 25848561-C-T P1_Y2 ***
27971568-T-A 25825421-T-A P1_Y2 ***
22502177-GTGAA-TTGAG 20340291-GTGAA-TTGAG DYZ19 ***
27940190-A-T 25794043-A-T P1_Y2 ***
22983994-AT-A 20822108-AT-A ***
24386919-CTATATATATCCCA-C 22240772-CTATATATATCCCA-C ***
24388087-T-TAA 22241940-T-TAA ***
16344416-C-CTTCTTT 14232536-C-CTTCTTT ***
27915876-C-A 25769729-C-A P1_Y2 ***
27863064-A-T 25716917-A-T P1_Y2 ***
22337470-TA-GT 20175584-TA-GT DYZ19 ***
58819898-G-C 56770973-C-G ***
58884940-G-A 56705931-C-T ***
58855362-G-T 56735509-C-A ***
58880516-G-T 56710355-C-A ***
58868976-C-T 56721895-G-A ***
58868971-C-T 56721900-G-A ***
58868044-G-T 56722827-C-A ***
58865452-T-G 56725419-A-C ***
58865319-A-T 56725552-T-A ***
58863827-C-G 56727044-G-C ***
22267286-AGACC-GGACG 20105400-AGACC-GGACG DYZ19 ***
58862541-C-A 56728330-G-T ***
22302526-CT-C 20140640-CT-C DYZ19 ***
22324940-AC-GT 20163054-AC-GT DYZ19 ***
22337444-AG-GT 20175558-AG-GT DYZ19 ***
58854422-C-A 56736449-G-T ***
58823560-C-G 56767311-G-C ***
58843376-A-T 56747495-T-A ***
58843319-C-G 56747552-G-C ***
58840753-T-G 56750118-A-C ***
58839164-C-G 56751707-G-C ***
58839162-A-T 56751709-T-A ***
58837622-T-C 56753249-A-G ***
58837597-C-T 56753274-G-A ***
58837583-A-G 56753288-T-C ***
58837545-T-C 56753326-A-G ***
22337421-C-T 20175535-C-T DYZ19 ***
58834563-G-A 56756308-C-T ***
58834472-C-A 56756399-G-T ***
58823574-T-G 56767297-A-C ***
22344461-G-T 20182575-G-T DYZ19 ***
18892323-A-G 16780443-A-G ***
22337268-C-T 20175382-C-T DYZ19 ***
7003090-C-T 7135049-C-T ***
9040914-A-C 9203305-A-C ***
9040909-A-C 9203300-A-C ***
8278776-G-T 8410735-G-T ***
8062216-C-T 8194175-C-T ***
7924377-G-T 8056336-G-T ***
7924372-T-G 8056331-T-G ***
7711499-G-A 7843458-G-A ***
7461249-C-G 7593208-C-G IR1_L ***
7301560-G-A 7433519-G-A ***
7175279-C-T 7307238-C-T ***
7121489-C-T 7253448-C-T ***
7059848-T-G 7191807-T-G ***
7059671-A-G 7191630-A-G ***
7003087-C-T 7135046-C-T ***
9298340-T-A 9460731-T-A ***
7003070-G-C 7135029-G-C ***
7003019-C-T 7134978-C-T ***
7003009-C-A 7134968-C-A ***
6901601-T-C 7033560-T-C ***
6749883-A-C 6881842-A-C ***
6684393-A-G 6816352-A-G ***
6618112-A-T 6750071-A-T ***
6544064-G-A 6676023-G-A ***
6264424-A-G 6396383-A-G IR3_Dst ***
6163364-C-A 6295323-C-A IR3_Dst ***
6150492-C-T 6282451-C-T IR3_Dst ***
6113155-A-C 6245114-A-C ***
5812638-C-A 5944597-C-A ***
9040919-A-C 9203310-A-C ***
9356678-C-A 9519069-C-A ***
5705697-T-G 5837656-T-G ***
13347446-T-A 11191770-T-A ***
14109784-G-T 11989078-G-T ***
14025624-G-A 11904918-G-A ***
13746661-C-T 11590985-C-T ***
13746660-C-G 11590984-C-G ***
13746612-C-T 11590936-C-T ***
13733794-T-C 11578118-T-C ***
13729809-T-A 11574133-T-A ***
13729799-C-T 11574123-C-T ***
13729780-G-T 11574104-G-T ***
13729613-G-T 11573937-G-T ***
13726754-G-A 11571078-G-A ***
13608601-A-C 11452925-A-C ***
13566991-A-T 11411315-A-T 17×T***
13256847-A-G 11101171-A-G ***
9557581-T-A 9719972-T-A IR3_Prx ***
13223565-A-G 11067889-A-G ***
13223532-A-G 11067856-A-G ***
13223485-A-G 11067809-A-G ***
10098973-C-A 10261364-C-A ***
10073621-A-C 10236012-A-C ***
10073483-T-C 10235874-T-C ***
9991044-A-T 10153435-A-T ***
9900018-A-T 10062409-A-T ***
9680183-C-T 9842574-C-T IR3_Prx ***
9665942-C-T 9828333-C-T IR3_Prx ***
9651618-A-G 9814009-A-G IR3_Prx ***
9592340-C-T 9754731-C-T IR3_Prx ***
9584012-C-A 9746403-C-A IR3_Prx ***
5735972-G-A 5867931-G-A ***
5705694-C-T 5837653-C-T ***
14130809-T-G 12010103-T-G ***
6954938-AAT-A 7086897-AAT-A ***
22341452-A-T 20179566-A-T DYZ19 ***
24388086-A-ATT 22241939-A-ATT ***
22360838-C-T 20198952-C-T DYZ19 ***
22335797-C-G 20173911-C-G DYZ19 ***
13746658-T-G 11590982-T-G ***
13729713-C-T 11574037-C-T ***
22360838-CTTAA-TTTAC 20198952-CTTAA-TTTAC DYZ19 ***
58999578-C-A 56853431-C-A ***
58916367-C-T 56674504-G-A ***
28578920-C-T 26432773-C-T ***
21350751-A-T 19188865-A-T ***
19138349-C-A 17026469-C-A 11×TA***
14119772-A-C 11999066-A-C ***
25466376-T-G 23320229-T-G P2_r2 ***
22341515-G-C 20179629-G-C DYZ19 ***
3428687-GATATAT-G 3560646-GATATAT-G 22×AT***
22490766-ACTTC-TCTTG 20328880-ACTTC-TCTTG DYZ19 ***
25466379-T-G 23320232-T-G P2_r2 ***
22248403-C-T 20086517-C-T DYZ19 ***
5354792-A-T 5486751-A-T 16×T***
22420606-A-G 20258720-A-G DYZ19 ***
13898366-C-CA 11777660-C-CA 15×A***
27873376-A-G 25727229-A-G P1_Y2 ***
22337471-A-T 20175585-A-T DYZ19 ***
22337470-T-G 20175584-T-G DYZ19 ***
22297133-CCAGAA-ATAGTG 20135247-CCAGAA-ATAGTG DYZ19 ***
25954141-T-A 23807994-T-A P1_Y1 ***
24388080-T-TCA 22241933-T-TCA ***
22341472-G-C 20179586-G-C DYZ19 ***
22435005-A-T 20273119-A-T DYZ19 ***
5704522-A-G 5836481-A-G ***
3873317-C-T 4005276-C-T ***
5346918-T-C 5478877-T-C ***
5273308-C-A 5405267-C-A ***
5130584-C-A 5262543-C-A ***
5130526-C-T 5262485-C-T ***
5129933-C-T 5261892-C-T ***
4817608-C-G 4949567-C-G ***
4621294-C-G 4753253-C-G ***
4621284-G-C 4753243-G-C ***
4621239-C-T 4753198-C-T ***
4621231-G-A 4753190-G-A ***
4621225-C-A 4753184-C-A ***
4115356-G-A 4247315-G-A ***
3967435-T-G 4099394-T-G ***
3490941-A-C 3622900-A-C ***
24771036-C-T 22624889-C-T P3_b2 ***
2955604-C-T 3087563-C-T ***
2955597-G-T 3087556-G-T ***
2786819-T-G 2918778-T-G ***
2772506-C-T 2904465-C-T ***
2772476-G-T 2904435-G-T ***
2772438-A-G 2904397-A-G ***
28458106-T-C 26311959-T-C ***
58837666-A-G 56753205-T-C ***
22693821-T-C 20531935-T-C ***
18892360-A-G 16780480-A-G ***
58846554-A-C 56744317-T-G ***
58829834-G-C 56761037-C-G ***
18892367-T-C 16780487-T-C ***
58916340-T-C 56674531-A-G ***
14118703-G-C 11997997-G-C ***
14130826-G-C 12010120-G-C ***
22333366-A-T 20171480-A-T DYZ19 ***
20438600-A-T 18276714-A-T P5_Dst ***
21350764-T-C 19188878-T-C ***
21350742-A-G 19188856-A-G ***
21350738-T-A 19188852-T-A ***
21350735-T-C 19188849-T-C ***
21350734-C-T 19188848-C-T ***
21350717-G-A 19188831-G-A ***
21335280-A-C 19173394-A-C ***
21197115-T-A 19035229-T-A ***
20632380-T-G 18470494-T-G P4_Prx ***
20595748-G-T 18433862-G-T P5_Dst ***
20438874-A-T 18276988-A-T P5_Dst ***
20438688-T-A 18276802-T-A P5_Dst ***
20438622-G-T 18276736-G-T P5_Dst ***
20438596-A-T 18276710-A-T P5_Dst ***
21350777-T-C 19188891-T-C ***
20426101-C-T 18264215-C-T P5_Dst ***
20425803-C-A 18263917-C-A P5_Dst 15×A***
20333666-C-A 18171780-C-A P5_Dst ***
20326149-A-T 18164263-A-T P5_Dst ***
20006179-A-G 17894299-A-G P5_Prx ***
19992977-G-T 17881097-G-T P5_Prx ***
19965101-C-A 17853221-C-A P5_Prx ***
19936708-G-A 17824828-G-A P5_Prx ***
19853788-C-A 17741908-C-A P5_Prx ***
19846218-A-T 17734338-A-T P5_Prx ***
19611276-G-T 17499396-G-T P5_Prx ***
19604280-T-C 17492400-T-C P5_Prx ***
19487228-G-T 17375348-G-T ***
21350773-T-G 19188887-T-G ***
21350784-C-G 19188898-C-G ***
19174542-G-T 17062662-G-T ***
22297137-A-T 20135251-A-T DYZ19 ***
22333345-A-G 20171459-A-G DYZ19 ***
22333233-C-A 20171347-C-A DYZ19 ***
22322194-G-T 20160308-G-T DYZ19 ***
22313200-A-C 20151314-A-C BY25065 DYZ19 ***
22310008-G-T 20148122-G-T DYZ19 ***
22309553-T-G 20147667-T-G DYZ19 ***
22309125-T-C 20147239-T-C DYZ19 ***
22309119-A-C 20147233-A-C DYZ19 ***
22309097-T-C 20147211-T-C DYZ19 ***
22309096-G-A 20147210-G-A DYZ19 ***
22309092-T-C 20147206-T-C DYZ19 ***
22309033-A-G 20147147-A-G DYZ19 ***
22308883-G-T 20146997-G-T DYZ19 ***
22293340-A-T 20131454-A-T DYZ19 ***
21350789-C-T 19188903-C-T ***
22292181-T-C 20130295-T-C DYZ19 ***
22292071-C-G 20130185-C-G DYZ19 ***
22268172-G-A 20106286-G-A DYZ19 ***
22267418-T-A 20105532-T-A DYZ19 ***
22267298-T-C 20105412-T-C DYZ19 ***
22237261-C-A 20075375-C-A DYZ19 ***
22236866-G-A 20074980-G-A DYZ19 ***
22234982-T-A 20073096-T-A DYZ19 ***
22234915-A-T 20073029-A-T DYZ19 ***
22234895-G-T 20073009-G-T DYZ19 ***
22017688-G-A 19855802-G-A ***
21945058-C-G 19783172-C-G ***
22503165-AGACT-CGACA 20341279-AGACT-CGACA DYZ19 ***
19174543-G-T 17062663-G-T ***
19102613-C-A 16990733-C-A ***
14130829-T-G 12010123-T-G ***
14739705-T-A 12627773-T-A ***
15628977-C-T 13517097-C-T ***
15628975-G-A 13517095-G-A ***
15628963-T-C 13517083-T-C ***
15628959-T-A 13517079-T-A ***
15628947-A-G 13517067-A-G ***
15628931-C-A 13517051-C-A ***
15221449-C-G 13109535-C-G ***
15221444-T-C 13109530-T-C ***
15221435-T-A 13109521-T-A ***
15189186-C-T 13077272-C-T ***
15119771-T-A 13007858-T-A ***
14989158-G-A 12877224-G-A ***
14962123-G-A 12850198-G-A ***
14671613-T-G 12559679-T-G ***
15853127-G-T 13741247-G-T ***
14292560-G-T 12171854-G-T ***
14181293-C-T 12060587-C-T ***
14130930-C-T 12010224-C-T ***
14130928-A-G 12010222-A-G ***
14130925-G-A 12010219-G-A ***
14130919-G-T 12010213-G-T ***
14130896-G-T 12010190-G-T ***
14130884-T-C 12010178-T-C ***
14130883-T-G 12010177-T-G ***
14130868-A-T 12010162-A-T ***
14130866-T-G 12010160-T-G ***
14130835-A-T 12010129-A-T ***
14130834-T-C 12010128-T-C ***
15631144-A-T 13519264-A-T ***
15853128-A-G 13741248-A-G ***
18892325-G-A 16780445-G-A ***
17125116-T-C 15013236-T-C ***
18625071-C-A 16513191-C-A ***
18580116-A-G 16468236-A-G ***
18526190-A-T 16414310-A-T P6_Dst ***
18479843-G-A 16367963-G-A P6_Dst ***
18462160-A-T 16350280-A-T P6_Dst ***
18435078-G-A 16323198-G-A P6_Dst ***
18289274-A-C 16177394-A-C P6_Prx ***
18275493-T-A 16163613-T-A P6_Prx ***
18272187-T-A 16160307-T-A P6_Prx ***
18227221-C-A 16115341-C-A FGC29539 ***
18139262-A-T 16027382-A-T ***
18041732-A-T 15929852-A-T ***
17270514-G-A 15158634-G-A ***
17123422-C-T 15011542-C-T ***
15853142-C-T 13741262-C-T ***
17123063-G-T 15011183-G-T ***
17084115-A-T 14972235-A-T ***
16826981-A-G 14715101-A-G ***
16826948-T-C 14715068-T-C ***
16826905-A-T 14715025-A-T ***
16826902-T-A 14715022-T-A ***
16826889-C-A 14715009-C-A ***
16686889-G-C 14575009-G-C ***
16499140-A-T 14387260-A-T ***
16309251-T-A 14197371-T-A 19×A***
16228059-T-A 14116179-T-A 4×GAGG***
16026977-A-C 13915097-A-C ***
15963277-A-C 13851397-A-C ***
15904129-G-A 13792249-G-A ***
58980029-TTCCACTCCACG-CTCCACACCACT 56833882-TTCCACTCCACG-CTCCACACCACT ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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