Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > M222 > DF106 > DF104 > DF105 > DF85 > S673 > S668 > DF97 > ZZ36 > FGC19851 > BY3346 > FGC19846 > FGC19840 > FGC19845

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC-BigY
7KEJH
14581400-A-G 12469600-A-G FGC36685 YY+
23526775-T-C 21364889-T-C FGC36684 YY+
5710227-CAT-C 5842186-CAT-C *
14179473-A-ATGTC 12058767-A-ATGTC **
10073718-T-A 10236109-T-A **
24406554-G-T 22260407-G-T **
14592236-A-C 12480436-A-C **
14693700-G-T 12581766-G-T **
23419125-C-A 21257239-C-A **
23198873-G-T 21036987-G-T **
23190045-C-A 21028159-C-A **
23142404-C-A 20980518-C-A **
22782021-C-A 20620135-C-A **
59009432-G-T 56863285-G-T **
14198495-C-A 12077789-C-A **
59009392-G-A 56863245-G-A **
13271202-C-A 11115526-C-A **
15763262-G-T 13651382-G-T **
15858442-G-A 13746562-G-A FGC47266 **
15894084-C-A 13782204-C-A **
15975080-C-A 13863200-C-A **
58996237-C-T 56850090-C-T **
21737799-C-A 19575913-C-A **
58990563-AC-A 56844416-AC-A **
13271184-G-A 11115508-G-A **
9077232-G-T 9239623-G-T **
19423771-G-T 17311891-G-T **
13861486-G-T 11740780-G-T **
28779057-C-T 26632910-C-T **
9063685-C-A 9226076-C-A **
8911986-G-T 9043945-G-T **
10043721-T-A 10206112-T-A **
10043758-T-A 10206149-T-A **
10073738-C-A 10236129-C-A **
8279815-G-T 8411774-G-T **
8166613-G-A 8298572-G-A **
7724559-C-A 7856518-C-A **
28724127-C-A 26577980-C-A **
13457612-C-A 11301936-C-A **
7243145-C-A 7375104-C-A **
2763696-C-A 2895655-C-A **
7114642-G-T 7246601-G-T **
7091394-C-A 7223353-C-A **
7035280-T-G 7167239-T-G **
58973313-G-T 56827166-G-T **
5313431-C-A 5445390-C-A **
58994973-G-T 56848826-G-T **
4889298-C-A 5021257-C-A **
4448957-C-A 4580916-C-A **
3841550-A-T 3973509-A-T **
14027600-G-A 11906894-G-A **
3322330-G-T 3454289-G-T **
16352261-G-T 14240381-G-T **
23789385-C-A 21627499-C-A **
18067401-TAGAAAGAAAGAA-T 15955521-TAGAAAGAAAGAA-T 15×AGAA**
19460705-C-A 17348825-C-A **
19475169-G-C 17363289-G-C **
17504216-A-G 15392336-A-G **
18223788-T-C 16111908-T-C **
19241500-C-A 17129620-C-A **
17753739-C-A 15641859-C-A **
28499309-TG-T 26353162-TG-T **
21115595-A-C 18953709-A-C **
21147896-C-A 18986010-C-A **
18539053-T-C 16427173-T-C **
21562049-TCACA-T 19400163-TCACA-T 18×CA**
25368961-G-A 23222814-G-A P2_r2 ***
19893084-G-T 17781204-G-T P5_Prx ***
21263437-C-T 19101551-C-T ***
25157866-A-G 23011719-A-G g1 ***
19893090-C-A 17781210-C-A P5_Prx ***
25130013-T-G 22983866-T-G g1 ***
25127514-T-G 22981367-T-G g1 ***
25372102-T-A 23225955-T-A P2_r2 ***
25446335-A-G 23300188-A-G P2_r2 ***
25374543-G-T 23228396-G-T P2_r2 ***
25434977-G-A 23288830-G-A P2_r2 ***
25438786-G-T 23292639-G-T P2_r2 ***
25452431-G-T 23306284-G-T P2_r2 ***
19849729-A-C 17737849-A-C P5_Prx ***
25456401-C-A 23310254-C-A P2_r2 ***
25465399-A-T 23319252-A-T P2_r2 ***
25466285-T-G 23320138-T-G P2_r2 ***
25469106-C-G 23322959-C-G P2_r2 ***
25480308-A-T 23334161-A-T P2_r2 ***
25480317-T-A 23334170-T-A P2_r2 ***
25127447-C-A 22981300-C-A g1 ***
20093587-G-T 17981707-G-T P5_Dst ***
25010626-C-A 22864479-C-A g1 ***
24775364-C-A 22629217-C-A P3_b2 ***
24713296-G-T 22567149-G-T P3_b2 ***
24717814-A-C 22571667-A-C P3_b2 ***
24728572-A-C 22582425-A-C P3_b2 ***
20204108-A-T 18042222-A-T P5_Dst ***
20204074-T-C 18042188-T-C P5_Dst ***
24739673-C-A 22593526-C-A P3_b2 ***
24742036-A-G 22595889-A-G P3_b2 ***
24742747-G-A 22596600-G-A P3_b2 ***
24765598-G-T 22619451-G-T P3_b2 ***
20194297-T-A 18032411-T-A P5_Dst ***
24987787-C-A 22841640-C-A g1 ***
20134997-G-T 18023117-G-T P5_Dst ***
20111896-A-C 18000016-A-C P5_Dst ***
24775381-C-A 22629234-C-A P3_b2 ***
24776459-G-T 22630312-G-T P3_b2 ***
20107349-C-G 17995469-C-G P5_Dst ***
24785815-C-A 22639668-C-A P3_b2 ***
24790327-A-G 22644180-A-G P3_b2 ***
24792776-A-C 22646629-A-C P3_b2 ***
24842083-A-G 22695936-A-G P3_b2 ***
24861218-C-T 22715071-C-T P3_b2 ***
25485143-C-T 23338996-C-T P2_r2 ***
19744952-G-T 17633072-G-T P5_Prx ***
25492347-A-T 23346200-A-T P2_r2 ***
26874710-A-G 24728563-A-G P1_r3 ***
26283332-C-T 24137185-C-T P1_Y1 ***
26465222-T-A 24319075-T-A P1_Y1 ***
26558021-T-C 24411874-T-C P1_g2 ***
26563214-A-G 24417067-A-G P1_g2 ***
26676707-G-T 24530560-G-T P1_g2 ***
19449310-C-A 17337430-C-A ***
26699191-T-C 24553044-T-C P1_g2 ***
26810630-G-T 24664483-G-T P1_g2 ***
26810659-C-G 24664512-C-G P1_g2 ***
26912659-T-G 24766512-T-G P1_r3 ***
26147096-T-G 24000949-T-G P1_Y1 ***
26914216-C-T 24768069-C-T P1_r3 ***
26914227-C-T 24768080-C-T P1_r3 ***
26943827-G-A 24797680-G-A P1_r3 ***
26955004-C-A 24808857-C-A P1_r3 ***
26955701-G-C 24809554-G-C P1_r3 ***
26986468-A-T 24840321-A-T P1_r4 ***
26991278-T-A 24845131-T-A P1_r4 ***
26993003-T-A 24846856-T-A P1_r4 ***
27001814-A-C 24855667-A-C P1_r4 ***
27004253-G-C 24858106-G-C P1_r4 ***
26279652-T-C 24133505-T-C P1_Y1 ***
26135822-G-T 23989675-G-T P1_Y1 ***
19770241-C-A 17658361-C-A P5_Prx ***
25669937-G-A 23523790-G-A P1_b3 ***
20210874-A-G 18048988-A-G P5_Dst ***
19727487-A-T 17615607-A-T P5_Prx ***
25567903-T-G 23421756-T-G P1_gr1 ***
25628590-A-T 23482443-A-T P1_b3 ***
25631004-G-T 23484857-G-T P1_b3 ***
25641627-C-G 23495480-C-G P1_b3 ***
25646999-T-A 23500852-T-A P1_b3 ***
19620701-C-A 17508821-C-A P5_Prx ***
25658005-G-T 23511858-G-T P1_b3 ***
25677706-T-C 23531559-T-C P1_b3 ***
26088654-G-T 23942507-G-T P1_Y1 ***
25678956-G-T 23532809-G-T P1_b3 ***
19531444-T-G 17419564-T-G ***
25722235-A-C 23576088-A-C P1_b3 ***
25762434-A-C 23616287-A-C P1_b3 ***
19496284-T-G 17384404-T-G ***
25835327-A-G 23689180-A-G P1_b3 ***
25843648-C-T 23697501-C-T P1_b3 ***
25896982-T-G 23750835-T-G P1_Y1 ***
25978691-C-A 23832544-C-A P1_Y1 ***
19496245-C-A 17384365-C-A ***
24707220-C-A 22561073-C-A P3_b2 ***
20232577-G-T 18070691-G-T P5_Dst ***
24703316-A-C 22557169-A-C P3_b2 ***
22493724-T-A 20331838-T-A DYZ19 ***
22173500-C-A 20011614-C-A ***
22222715-T-G 20060829-T-G DYZ19 ***
22359076-A-C 20197190-A-C DYZ19 ***
22360118-G-A 20198232-G-A DYZ19 ***
22448951-G-T 20287065-G-T DYZ19 ***
22481301-C-T 20319415-C-T DYZ19 ***
20998196-G-A 18836310-G-A P4_Dst ***
20998180-T-A 18836294-T-A P4_Dst ***
22481555-T-G 20319669-T-G DYZ19 ***
20888691-G-T 18726805-G-T P4_Dst ***
22092757-C-A 19930871-C-A ***
22493766-G-C 20331880-G-C DYZ19 ***
20888679-G-A 18726793-G-A P4_Dst ***
22505328-T-G 20343442-T-G DYZ19 ***
20840366-C-A 18678480-C-A P4_Gap ***
22548434-C-T 20386548-C-T ***
22577082-T-G 20415196-T-G ***
22644307-A-G 20482421-A-G ***
22659551-C-A 20497665-C-A ***
22683668-A-G 20521782-A-G ***
22683681-T-A 20521795-T-A ***
22133905-T-A 19972019-T-A ***
22018055-G-T 19856169-G-T ***
20809866-A-T 18647980-A-T P4_Gap ***
21482841-C-A 19320955-C-A ***
21281569-C-A 19119683-C-A ***
21300186-A-C 19138300-A-C ***
21300197-G-T 19138311-G-T ***
21306577-C-A 19144691-C-A ***
21371753-G-T 19209867-G-T ***
21409640-G-T 19247754-G-T ***
21417780-A-G 19255894-A-G ***
21428638-G-T 19266752-G-T ***
21468004-G-A 19306118-G-A ***
21477102-C-A 19315216-C-A ***
21515793-G-A 19353907-G-A ***
21926610-C-A 19764724-C-A ***
21515820-G-A 19353934-G-A ***
21144533-A-T 18982647-A-T ***
21515830-T-A 19353944-T-A ***
21515841-C-A 19353955-C-A ***
21555542-G-T 19393656-G-T ***
21555567-C-A 19393681-C-A ***
21555569-G-T 19393683-G-T ***
21097228-C-A 18935342-C-A ***
21555573-G-T 19393687-G-T ***
21003255-C-A 18841369-C-A P4_Dst ***
22683686-T-A 20521800-T-A ***
20809865-A-C 18647979-A-C P4_Gap ***
24701159-T-A 22555012-T-A P3_b2 ***
20340211-A-C 18178325-A-C P5_Dst ***
23892503-C-A 21730617-C-A ***
24033486-G-A 21887339-G-A ***
24037173-G-T 21891026-G-T ***
24038943-G-T 21892796-G-T ***
24040982-G-T 21894835-G-T ***
24041929-G-T 21895782-G-T ***
24049143-C-A 21902996-C-A ***
24052532-C-A 21906385-C-A P3_b1 ***
24060311-G-T 21914164-G-T P3_b1 ***
24189529-C-A 22043382-C-A P3_b1 ***
24513142-G-T 22366995-G-T ***
23821952-G-T 21660066-G-T ***
24513611-T-G 22367464-T-G ***
24513701-C-A 22367554-C-A ***
24543443-G-T 22397296-G-T P3_t2 ***
24618912-T-G 22472765-T-G P3_t2 ***
20340208-G-T 18178322-G-T P5_Dst ***
24657299-G-T 22511152-G-T P3_b2 ***
24671140-T-A 22524993-T-A P3_b2 ***
21267811-G-C 19105925-G-C ***
24671301-G-A 22525154-G-A P3_b2 ***
20221753-A-T 18059867-A-T P5_Dst ***
23828061-T-A 21666175-T-A ***
23818492-G-T 21656606-G-T ***
22683715-T-G 20521829-T-G ***
23401468-C-A 21239582-C-A ***
22811980-G-T 20650094-G-T ***
22842277-G-A 20680391-G-A ***
23009431-T-G 20847545-T-G ***
23087687-C-T 20925801-C-T ***
23111804-C-G 20949918-C-G ***
20679166-G-T 18517280-G-T P4_Prx ***
23186087-C-A 21024201-C-A ***
20511122-C-T 18349236-C-T P5_Dst ***
20511039-G-T 18349153-G-T P5_Dst ***
23360697-T-G 21198811-T-G ***
20479273-T-G 18317387-T-G P5_Dst ***
23808201-A-G 21646315-A-G ***
23442718-C-A 21280832-C-A ***
23442721-C-A 21280835-C-A ***
23447525-C-A 21285639-C-A ***
23693653-A-C 21531767-A-C ***
23710479-T-C 21548593-T-C ***
20428468-G-T 18266582-G-T P5_Dst ***
23745492-C-A 21583606-C-A ***
27035505-A-T 24889358-A-T P1_r4 ***
20368132-A-T 18206246-A-T P5_Dst ***
20340224-G-T 18178338-G-T P5_Dst ***
27004265-G-C 24858118-G-C P1_r4 ***
58883808-C-T 56707063-G-A ***
27068158-C-T 24922011-C-T P1_r4 ***
22481294-GAC-TAT 20319408-GAC-TAT DYZ19 ***
20141755-A-AATTG 18029875-A-AATTG P5_Dst ***
20210243-C-CCAT 18048357-C-CCAT P5_Dst ***
20214462-CCAA-C 18052576-CCAA-C P5_Dst ***
20426755-CTC-TTCT 18264869-CTC-TTCT P5_Dst ***
20439586-A-AGACAG 18277700-A-AGACAG P5_Dst ***
20716996-TGT-AGA 18555110-TGT-AGA P4_Prx ***
20897484-A-ACAG 18735598-A-ACAG P4_Dst ***
20908997-A-AAGGAC 18747111-A-AAGGAC P4_Dst ***
20933509-CA-C 18771623-CA-C P4_Dst ***
20994238-TA-T 18832352-TA-T P4_Dst 6×AAGA***
22048230-CAAA-C 19886344-CAAA-C 15×A***
22505056-AGTGT-TGTGA 20343170-AGTGT-TGTGA DYZ19 ***
19926979-GTATTTC-TTTTTTT 17815099-GTATTTC-TTTTTTT P5_Prx ***
22737231-CAAAAAAA-C 20575345-CAAAAAAA-C 18×A***
24034446-GC-G 21888299-GC-G ***
24049158-C-CA 21903011-C-CA 9×A***
24553438-TA-T 22407291-TA-T P3_t2 ***
24585505-AAAATGTGGCTAACACACTGC-A 22439358-AAAATGTGGCTAACACACTGC-A P3_t2 ***
24597883-AGCT-GGCC 22451736-AGCT-GGCC P3_t2 ***
24700556-A-ACT 22554409-A-ACT P3_b2 ***
24704847-T-TCTG 22558700-T-TCTG P3_b2 ***
24710331-AAT-GAA 22564184-AAT-GAA P3_b2 ***
24743615-TGGGGGGGCAAA-T 22597468-TGGGGGGGCAAA-T P3_b2 ***
24752764-AT-A 22606617-AT-A P3_b2 ***
24778541-G-GGCT 22632394-G-GGCT P3_b2 ***
20089638-A-AGACAG 17977758-A-AGACAG P5_Dst ***
18296168-CT-C 16184288-CT-C P6_Prx 10×T***
24792680-G-GAGC 22646533-G-GAGC P3_b2 ***
13859789-GGAT-AGAC 11739083-GGAT-AGAC ***
13729278-GG-TT 11573602-GG-TT ***
13739702-GGAATGGAATGGAATGGAA-TTAG 11584026-GGAATGGAATGGAATGGAA-TTAG ***
13739764-AATGGC-A 11584088-AATGGC-A ***
13739823-GG-TT 11584147-GG-TT ***
13804057-AAAGGTGTC-TATGGTCTT 11683351-AAAGGTGTC-TATGGTCTT ***
13854252-GGAC-TGAA 11733546-GGAC-TGAA ***
13857641-AAAT-GAAA 11736935-AAAT-GAAA ***
13857660-TT-GG 11736954-TT-GG ***
13857669-CC-A 11736963-CC-A ***
13857791-GAATG-TAATC 11737085-GAATG-TAATC ***
13858269-AGAA-GGAC 11737563-AGAA-GGAC ***
13866125-AAATT-GAATC 11745419-AAATT-GAATC ***
18014662-CCAT-C 15902782-CCAT-C P7_Dst 5×CAT***
13983550-G-GGAAGGAAT 11862844-G-GGAAGGAAT ***
14061366-ATTTT-A 11940660-ATTTT-A 17×T***
14376265-A-AGACAG 12255561-A-AGACAG ***
14746176-CAAAAAAA-C 12634245-CAAAAAAA-C 19×A***
14819056-TTTG-T 12707123-TTTG-T ***
14937873-C-CTTTTATTTTA 12825948-C-CTTTTATTTTA ***
15374441-GTT-G 13262561-GTT-G 20×T***
15491941-G-GTATA 13380061-G-GTATA 19×TA***
16145151-ATCAGCATTTTTTAAAAGCTTCCCTGGTACAGTCAAGTTTAAG-A 14033271-ATCAGCATTTTTTAAAAGCTTCCCTGGTACAGTCAAGTTTAAG-A P8_Dst ***
16176843-C-CA 14064963-C-CA ***
17083002-CTTTCTTTCT-C 14971122-CTTTCTTTCT-C ***
17189355-GAAAAAA-G 15077475-GAAAAAA-G 19×A***
24787454-CA-C 22641307-CA-C P3_b2 ***
24983141-A-AGACAG 22836994-A-AGACAG g1 ***
13601982-A-AAC 11446306-A-AAC 14×AC***
58972156-TCC-ACA 56826009-TCC-ACA ***
28001199-T-GA 25855052-T-GA P1_Y2 ***
28022181-CCAA-C 25876034-CCAA-C P1_Y2 ***
28125461-TC-T 25979314-TC-T P1_b4 ***
28226499-CT-C 26080352-CT-C P1_b4 ***
28258185-A-AGACAG 26112038-A-AGACAG P1_b4 ***
28581596-TA-T 26435449-TA-T 8×A***
28799249-GGA-G 26653102-GGA-G ***
58819738-CATTG-TATTC 56771129-CAATG-GAATA ***
58819747-CCA-TCG 56771122-TGG-CGA ***
58844600-C-CGGTTTGAAGG 56746270-G-GCCTTCAAACC ***
58908887-TTCC-CTCCATTAT 56681981-GGAA-ATAATGGAG ***
58972730-TATTCCATTC-CATCCCGTTT 56826583-TATTCCATTC-CATCCCGTTT ***
27777421-CA-C 25631274-CA-C P1_Y2 ***
58974199-GCCAT-TCCAG 56828052-GCCAT-TCCAG ***
58975998-CACG-TGTT 56829851-CACG-TGTT ***
58976588-GG-CT 56830441-GG-CT ***
58976687-TGC-CAT 56830540-TGC-CAT ***
58977129-CG-TGCTCTA 56830982-CG-TGCTCTA ***
58977283-GATCTC-TAGCAA 56831136-GATCTC-TAGCAA ***
58978016-TTTCCATTG-ATTCCATTC 56831869-TTTCCATTG-ATTCCATTC ***
58978729-CTTCAAA-TTTTGAC 56832582-CTTCAAA-TTTTGAC ***
58996993-TC-CA 56850846-TC-CA ***
2817707-TACA-T 2949666-TACA-T ***
5313437-ACCT-A 5445396-ACCT-A 5×CCT***
21464232-G-GAAAT 19302346-G-GAAAT ***
27791098-A-AGACAG 25644951-A-AGACAG P1_Y2 ***
27602842-TTTTG-T 25456695-TTTTG-T P1_Y2 ***
25394890-T-TTCTG 23248743-T-TTCTG P2_r2 ***
26992907-G-GT 24846760-G-GT P1_r4 24×T***
25403538-GTA-G 23257391-GTA-G P2_r2 ***
25429364-TGGGGAGCAAAAGGGGTTATG-T 23283217-TGGGGAGCAAAAGGGGTTATG-T P2_r2 ***
25432726-A-AGCT 23286579-A-AGCT P2_r2 ***
25435206-TATTTTAATCTA-T 23289059-TATTTTAATCTA-T P2_r2 ***
25454174-A-ATCAAATTGT 23308027-A-ATCAAATTGT P2_r2 ***
25454177-AGC-A 23308030-AGC-A P2_r2 ***
25455549-A-AG 23309402-A-AG P2_r2 ***
25460777-CT-C 23314630-CT-C P2_r2 ***
25480302-GT-TG 23334155-GT-TG P2_r2 ***
25845397-C-CA 23699250-C-CA P1_b3 8×A***
26873983-CTT-C 24727836-CTT-C P1_r3 23×T***
27082231-AGGAGGGA-GGGGGGGG 24936084-AGGAGGGA-GGGGGGGG P1_r4 ***
27456888-C-CT 25310741-C-CT P1_Y2 11×T***
27117014-AT-A 24970867-AT-A P1_r4 8×T***
27131696-CC-TT 24985549-CC-TT P1_g3 ***
27147042-T-TTCCTG 25000895-T-TTCCTG P1_g3 ***
27151460-AT-A 25005313-AT-A P1_g3 9×T***
27156678-TA-T 25010531-TA-T P1_g3 ***
27206479-TCTAAAATAAATA-T 25060332-TCTAAAATAAATA-T P1_g3 ***
27214371-GTTGTTT-G 25068224-GTTGTTT-G P1_g3 ***
27231382-GCCCCAGCCT-G 25085235-GCCCCAGCCT-G P1_g3 ***
27296059-TGGCCAAAACA-T 25149912-TGGCCAAAACA-T P1_g3 ***
27302041-G-GCTGTC 25155894-G-GCTGTC P1_g3 ***
27340563-T-TTCTG 25194416-T-TTCTG P1_g3 ***
27368713-A-AGACAG 25222566-A-AGACAG P1_g3 ***
13661287-A-AATGTC 11505611-A-AATGTC ***
13566931-GTG-A 11411255-GTG-A ***
27095809-G-T 24949662-G-T P1_r4 ***
28332322-G-T 26186175-G-T P1_b4 ***
27917426-T-C 25771279-T-C P1_Y2 ***
27953678-G-T 25807531-G-T P1_Y2 ***
27967521-C-A 25821374-C-A P1_Y2 ***
27982341-A-G 25836194-A-G P1_Y2 ***
28062296-G-T 25916149-G-T P1_Y2 ***
28094383-G-T 25948236-G-T P1_Y2 ***
28117221-G-T 25971074-G-T P1_b4 ***
28160892-C-T 26014745-C-T P1_b4 ***
28160931-C-T 26014784-C-T P1_b4 ***
28182579-C-A 26036432-C-A P1_b4 ***
28214046-T-A 26067899-T-A P1_b4 ***
28438181-T-A 26292034-T-A P1_gr2 ***
27872586-G-C 25726439-G-C P1_Y2 ***
28566878-C-A 26420731-C-A ***
28772871-C-A 26626724-C-A ***
28798982-T-C 26652835-T-C ***
58821095-C-A 56769776-G-T ***
58827414-A-T 56763457-T-A ***
58828109-C-T 56762762-G-A ***
58828127-A-C 56762744-T-G ***
58828128-G-T 56762743-C-A ***
58828171-T-C 56762700-A-G ***
58833969-A-G 56756902-T-C ***
58844587-A-T 56746284-T-A ***
58844594-T-C 56746277-A-G ***
27903204-C-A 25757057-C-A P1_Y2 ***
27859585-C-A 25713438-C-A P1_Y2 ***
58858766-C-G 56732105-G-C ***
27328595-A-G 25182448-A-G P1_g3 ***
27129816-G-T 24983669-G-T P1_g3 ***
27129829-A-C 24983682-A-C P1_g3 ***
27130722-C-A 24984575-C-A P1_g3 ***
27139573-G-T 24993426-G-T P1_g3 ***
27186530-T-A 25040383-T-A P1_g3 ***
27214394-A-G 25068247-A-G P1_g3 ***
27239620-C-T 25093473-C-T P1_g3 ***
27253349-G-T 25107202-G-T P1_g3 ***
27256411-C-A 25110264-C-A P1_g3 ***
27305506-T-A 25159359-T-A P1_g3 ***
27314296-C-A 25168149-C-A P1_g3 ***
27356614-G-C 25210467-G-C P1_g3 ***
27859481-T-A 25713334-T-A P1_Y2 ***
27371052-G-T 25224905-G-T P1_g3 ***
27497108-C-T 25350961-C-T P1_Y2 ***
19416699-G-A 17304819-G-A ***
27543446-T-C 25397299-T-C P1_Y2 ***
27711728-A-C 25565581-A-C P1_Y2 ***
27732895-G-T 25586748-G-T P1_Y2 ***
27778225-T-A 25632078-T-A P1_Y2 ***
27780486-G-C 25634339-G-C P1_Y2 ***
27782293-A-G 25636146-A-G P1_Y2 ***
27800882-A-G 25654735-A-G P1_Y2 ***
27837887-C-A 25691740-C-A P1_Y2 ***
27844638-A-C 25698491-A-C P1_Y2 ***
58846095-A-G 56744776-T-C ***
58858776-C-G 56732095-G-C ***
13488815-CGGAC-GGGAT 11333139-CGGAC-GGGAT ***
9930174-AGAT-GGAA 10092565-AGAT-GGAA ***
8069959-ATTT-A 8201918-ATTT-A 19×T***
8094570-GTA-G 8226529-GTA-G ***
8125049-A-AAAG 8257008-A-AAAG ***
8344057-ACTCATTGCTAGCTTG-TGTCAATGGTAGTTTA 8476016-ACTCATTGCTAGCTTG-TGTCAATGGTAGTTTA ***
8842943-TAAAA-T 8974902-TAAAA-T 22×A***
9360724-GTT-TTG 9523115-GTT-TTG ***
9556031-A-AT 9718422-A-AT IR3_Prx ***
9915591-AG-CT 10077982-AG-CT ***
9915625-TGGAG-GGGAT 10078016-TGGAG-GGGAT ***
9921827-TTTCTG-ATTCAC 10084218-TTTCTG-ATTCAC ***
9921879-CA-TG 10084270-CA-TG ***
10012814-TC-CT 10175205-TC-CT ***
7723948-CT-C 7855907-CT-C 25×T***
10041351-AG-GA 10203742-AG-GA ***
10042140-TGATTA-CAATTG 10204531-TGATTA-CAATTG ***
10067111-AATACAGT-GAGG 10229502-AATACAGT-GAGG ***
10086421-GTA-TTG 10248812-GTA-TTG ***
13445839-CCTGCT-TCTGTC 11290163-CCTGCT-TCTGTC ***
13460449-C-CCTT 11304773-C-CCTT ***
13460451-GCA-G 11304775-GCA-G ***
13460477-ATC-TTT 11304801-ATC-TTT ***
13468057-CTTG-GTTA 11312381-CTTG-GTTA ***
13475503-C-CT 11319827-C-CT ***
13476188-ATAAAT-TTACAC 11320512-ATAAAT-TTACAC ***
13486649-AG-A 11330973-AG-A ***
7988099-CTTT-C 8120058-CTTT-C 14×T***
7456748-TGT-GGG 7588707-TGT-GGG IR1_L ***
58862697-T-C 56728174-A-G ***
58991335-G-T 56845188-G-T ***
58862703-C-T 56728168-G-A ***
58873305-C-T 56717566-G-A ***
58876787-T-C 56714084-A-G ***
58883950-G-T 56706921-C-A ***
58912757-C-T 56678114-G-A ***
58912771-T-C 56678100-A-G ***
58979038-C-A 56832891-C-A ***
58979620-C-A 56833473-C-A ***
58979621-A-G 56833474-A-G ***
58991302-C-T 56845155-C-T ***
58991314-C-A 56845167-C-A ***
58991325-T-A 56845178-T-A ***
58994926-A-C 56848779-A-C ***
7414231-TCGCG-ACGCA 7546190-TCGCG-ACGCA ***
58997006-G-A 56850859-G-A ***
58991347-CCT-ACC 56845200-CCT-ACC ***
8431228-CT-C 8563187-CT-C 17×T***
13854287-AAA-CAT 11733581-AAA-CAT ***
58976379-ACATTACAT-CCACTCCAA 56830232-ACATTACAT-CCACTCCAA ***
13854270-AA-CT 11733564-AA-CT ***
10073679-CAA-GCT 10236070-CAA-GCT ***
13446325-GCT-ACA 11290649-GCT-ACA ***
26046002-CT-C 23899855-CT-C P1_Y1 13×T***
15565939-CA-C 13454059-CA-C 16×A***
8094546-GTA-G 8226505-GTA-G ***
2783642-GAAA-G 2915601-GAAA-G 15×A***
27534344-G-A 25388197-G-A P1_Y2 ***
18290755-T-A 16178875-T-A P6_Prx ***
19391289-C-A 17279409-C-A ***
2854971-G-T 2986930-G-T ***
58996539-G-C 56850392-G-C ***
58997280-A-C 56851133-A-C ***
13475567-T-A 11319891-T-A ***
58997119-T-C 56850972-T-C ***
58996561-G-A 56850414-G-A ***
9919482-A-C 10081873-A-C ***
10067158-C-T 10229549-C-T ***
13644027-G-T 11488351-G-T ***
2649658-C-A 2781617-C-A ***
2792597-T-A 2924556-T-A ***
2809633-C-A 2941592-C-A ***
3274193-C-A 3406152-C-A ***
13475553-G-A 11319877-G-A ***
3535581-C-A 3667540-C-A ***
4064008-C-A 4195967-C-A ***
4075816-G-T 4207775-G-T ***
4240816-T-C 4372775-T-C ***
4282569-G-A 4414528-G-A ***
4365946-G-T 4497905-G-T ***
5061616-A-G 5193575-A-G ***
5077498-A-G 5209457-A-G ***
5077519-C-A 5209478-C-A ***
5727583-C-A 5859542-C-A ***
6138927-G-T 6270886-G-T IR3_Dst ***
13489734-C-A 11334058-C-A ***
10073680-A-C 10236071-A-C ***
6545033-C-A 6676992-C-A ***
6293347-C-CT 6425306-C-CT IR3_Dst 15×T***
58977828-GACTCCACTCAACTCC-CATTCCCCTCCTCTCA 56831681-GACTCCACTCAACTCC-CATTCCCCTCCTCTCA ***
58981677-ACA-CCT 56835530-ACA-CCT ***
58981746-ACATA-CCATT 56835599-ACATA-CCATT ***
16558532-GA-G 14446652-GA-G 14×A***
9325160-T-G 9487551-T-G ***
18011079-C-T 15899199-C-T P7_Dst ***
10043014-GAGT-CAGC 10205405-GAGT-CAGC ***
18017108-G-GAT 15905228-G-GAT 22×AT***
27129799-T-C 24983652-T-C P1_g3 ***
18011039-A-G 15899159-A-G P7_Dst ***
13323515-AAAATACCG-TAAACA 11167839-AAAATACCG-TAAACA ***
13230389-C-A 11074713-C-A ***
10073681-A-T 10236072-A-T ***
3131457-A-ATCTCTTCTCT 3263416-A-ATCTCTTCTCT 14×TCTCT***
58996592-A-T 56850445-A-T ***
58996577-C-A 56850430-C-A ***
58912415-T-C 56678456-A-G ***
58996554-A-C 56850407-A-C ***
58991347-C-A 56845200-C-A ***
58991349-T-C 56845202-T-C ***
10073695-T-A 10236086-T-A ***
10073679-C-G 10236070-C-G ***
58912778-C-T 56678093-G-A ***
58984891-G-C 56838744-G-C ***
6340337-G-A 6472296-G-A IR3_Dst ***
6626730-C-A 6758689-C-A ***
13866949-GA-TG 11746243-GA-TG ***
8344065-C-G 8476024-C-G ***
7758854-C-A 7890813-C-A ***
7873688-C-A 8005647-C-A ***
7990970-G-T 8122929-G-T ***
8076784-C-A 8208743-C-A ***
8171912-C-A 8303871-C-A ***
8238235-G-T 8370194-G-T ***
8293882-C-A 8425841-C-A ***
8344042-C-T 8476001-C-T ***
8344057-A-T 8476016-A-T ***
8344058-C-G 8476017-C-G ***
8344062-T-A 8476021-T-A ***
8723615-C-A 8855574-C-A ***
7709967-G-T 7841926-G-T ***
8748427-A-C 8880386-A-C ***
8790181-G-T 8922140-G-T ***
8855926-C-A 8987885-C-A ***
8856891-C-A 8988850-C-A ***
8911925-G-T 9043884-G-T ***
8913413-G-T 9045372-G-T ***
8913736-G-C 9045695-G-C ***
8914739-C-A 9046698-C-A ***
8976642-C-A 9139033-C-A ***
9140217-C-A 9302608-C-A ***
9300729-A-C 9463120-A-C ***
7721186-C-A 7853145-C-A ***
7580080-C-A 7712039-C-A ***
6734812-G-T 6866771-G-T ***
7225351-T-C 7357310-T-C ***
6734839-C-A 6866798-C-A ***
6784423-A-C 6916382-A-C ***
7045634-G-T 7177593-G-T ***
7050306-A-T 7182265-A-T ***
7053977-C-A 7185936-C-A ***
7107068-C-A 7239027-C-A ***
7115386-C-A 7247345-C-A ***
7179890-C-A 7311849-C-A ***
7186883-G-T 7318842-G-T ***
7196386-C-A 7328345-C-A ***
7221714-C-A 7353673-C-A ***
7239084-C-A 7371043-C-A ***
7572763-C-A 7704722-C-A ***
7311933-C-A 7443892-C-A ***
7316596-T-G 7448555-T-G ***
7316608-T-G 7448567-T-G ***
7348654-A-G 7480613-A-G ***
7363235-G-A 7495194-G-A ***
7389925-C-A 7521884-C-A ***
7401053-G-T 7533012-G-T ***
7414221-T-A 7546180-T-A ***
7417151-G-T 7549110-G-T ***
7422529-C-A 7554488-C-A ***
7436116-G-T 7568075-G-T ***
7490247-C-T 7622206-C-T IR1_L ***
26284858-CAAA-C 24138711-CAAA-C P1_Y1 19×A***
27056942-A-G 24910795-A-G P1_r4 ***
9302629-T-C 9465020-T-C ***
58974927-A-T 56828780-A-T ***
19763364-GA-G 17651484-GA-G P5_Prx 15×A***
26001413-CT-C 23855266-CT-C P1_Y1 18×T***
9564452-CT-C 9726843-CT-C IR3_Prx 14×T***
16146467-T-TA 14034587-T-TA P8_Dst 10×A***
27819786-A-AT 25673639-A-AT P1_Y2 13×T***
14559665-G-GA 12447866-G-GA 10×A***
16921431-AT-A 14809551-AT-A 14×T***
10023656-CTC-T 10186047-CTC-T ***
13919208-CA-C 11798502-CA-C 17×A***
9968339-G-GT 10130730-G-GT 15×T***
22470656-C-G 20308770-C-G DYZ19 ***
22505029-A-G 20343143-A-G DYZ19 ***
10041429-A-G 10203820-A-G ***
13701152-T-C 11545476-T-C ***
13702766-T-C 11547090-T-C ***
13461696-T-A 11306020-T-A ***
28700766-C-T 26554619-C-T ***
13474008-CGTA-GGTG 11318332-CGTA-GGTG ***
2905857-C-T 3037816-C-T M3774 15×T***
6854399-C-A 6986358-C-A ***
19189494-C-T 17077614-C-T ***
24794436-T-G 22648289-T-G P3_b2 ***
25231954-T-G 23085807-T-G P2_r1 ***
25831995-A-T 23685848-A-T P1_b3 ***
20886818-T-A 18724932-T-A P4_Dst ***
10041399-C-T 10203790-C-T ***
27016187-A-C 24870040-A-C P1_r4 ***
24859198-G-GA 22713051-G-GA P3_b2 12×A***
26102972-A-T 23956825-A-T P1_Y1 ***
10023634-C-A 10186025-C-A ***
26102983-A-T 23956836-A-T P1_Y1 ***
22481429-G-C 20319543-G-C DYZ19 ***
13473724-T-A 11318048-T-A ***
58912787-G-C 56678084-C-G ***
22503639-G-C 20341753-G-C DYZ19 ***
13745911-T-G 11590235-T-G ***
58876794-C-G 56714077-G-C ***
9537704-CTG-C 9700095-CTG-C IR3_Prx 8×TG***
24696109-C-CA 22549962-C-CA P3_b2 15×A***
27711690-CT-C 25565543-CT-C P1_Y2 17×T***
10041413-G-T 10203804-G-T FGC36476 ***
27990535-G-T 25844388-G-T P1_Y2 ***
27778164-CT-C 25632017-CT-C P1_Y2 12×T***
22502903-G-C 20341017-G-C DYZ19 ***
27398541-C-A 25252394-C-A P1_g3 ***
13196474-A-C 11040798-A-C ***
19683841-CA-C 17571961-CA-C P5_Prx 14×A***
27809437-C-A 25663290-C-A P1_Y2 ***
58985598-G-A 56839451-G-A ***
19612191-AAT-A 17500311-AAT-A P5_Prx 9×AT***
24672342-C-G 22526195-C-G P3_b2 ***
10041393-G-C 10203784-G-C ***
26902230-T-A 24756083-T-A P1_r3 ***
28186037-A-G 26039890-A-G P1_b4 ***
27001804-A-T 24855657-A-T P1_r4 ***
58980693-ACCATTCCATTCCACT-A 56834546-ACCATTCCATTCCACT-A ***
14937865-T-TTTCTTTTCTA 12825940-T-TTTCTTTTCTA ***
58883692-A-C 56707179-T-G ***
13859632-GT-TTTC 11738926-GT-TTTC ***
28117258-GTTGATC-TTTTATT 25971111-GTTGATC-TTTTATT P1_b4 ***
7311620-A-C 7443579-A-C ***
9930129-C-T 10092520-C-T ***
10042184-G-A 10204575-G-A ***
13445955-A-C 11290279-A-C ***
13446029-T-A 11290353-T-A ***
13446371-T-G 11290695-T-G ***
58975213-T-C 56829066-T-C ***
58981320-C-G 56835173-C-G ***
18035703-A-G 15923823-A-G ***
59015765-T-C 56869618-T-C ***
59015836-A-G 56869689-A-G ***
59015862-T-C 56869715-T-C ***
59015902-C-T 56869755-C-T ***
17158995-G-T 15047115-G-T ***
19187499-G-T 17075619-G-T ***
19930476-C-T 17818596-C-T P5_Prx 22×T***
21714738-G-A 19552852-G-A ***
25177307-A-C 23031160-A-C g1 ***
25883630-C-T 23737483-C-T P1_Y1 17×T***
25883669-C-T 23737522-C-T P1_Y1 11×T***
25372091-A-T 23225944-A-T P2_r2 ***
10086440-C-T 10248831-C-T ***
10023630-C-CT 10186021-C-CT ***
10042192-T-G 10204583-T-G ***
13143673-GCAGG-ACAGT 10633159-GCAGG-ACAGT ***
26991266-TAGT-AAGA 24845119-TAGT-AAGA P1_r4 ***
28245714-A-AT 26099567-A-AT P1_b4 15×T***
58977796-TCCAC-CCCAT 56831649-TCCAC-CCCAT ***
24895675-A-C 22749528-A-C g1 ***
18855509-C-A 16743629-C-A ***
2651902-TG-T 2783861-TG-T ***
10041346-A-T 10203737-A-T ***
10041351-A-G 10203742-A-G ***
10041357-T-C 10203748-T-C ***
10042131-T-C 10204522-T-C ***
10042206-C-G 10204597-C-G ***
13857864-ACTAA-TTGAT 11737158-ACTAA-TTGAT ***
13809993-C-T 11689287-C-T ***
21170326-T-G 19008440-T-G ***
13740309-T-G 11584633-T-G ***
19727375-T-C 17615495-T-C P5_Prx ***
24043833-T-G 21897686-T-G ***
9930165-AGCGG-CGCGT 10092556-AGCGG-CGCGT ***
13809826-CTT-ATG 11689120-CTT-ATG ***
25177324-TAC-AAA 23031177-TAC-AAA g1 ***
27398546-GAAG-AAAA 25252399-GAAG-AAAA P1_g3 ***
27602856-A-G 25456709-A-G P1_Y2 ***
23881876-CA-C 21719990-CA-C 18×A***
13857834-TG-CA 11737128-TG-CA ***
9301352-G-A 9463743-G-A ***
9304120-C-A 9466511-C-A ***
19379685-G-T 17267805-G-T ***
16089806-G-T 13977926-G-T ***
15748442-G-T 13636562-G-T ***
15792873-G-T 13680993-G-T ***
15860075-A-C 13748195-A-C ***
15932400-C-A 13820520-C-A ***
15944302-A-G 13832422-A-G ***
15987200-G-T 13875320-G-T ***
15997428-G-T 13885548-G-T ***
16021046-A-C 13909166-A-C ***
16047704-C-A 13935824-C-A ***
16047800-T-A 13935920-T-A ***
16047801-A-T 13935921-A-T ***
16107536-C-A 13995656-C-A P8_Prx ***
15682741-C-A 13570861-C-A ***
16117776-A-C 14005896-A-C P8_Prx ***
16150119-A-G 14038239-A-G P8_Dst ***
16164452-C-A 14052572-C-A P8_Dst ***
16164473-C-A 14052593-C-A P8_Dst ***
16196194-A-C 14084314-A-C ***
16196211-C-A 14084331-C-A ***
16292605-C-T 14180725-C-T ***
16319372-C-T 14207492-C-T ***
16342184-C-A 14230304-C-A ***
16505106-G-T 14393226-G-T ***
16531057-C-A 14419177-C-A ***
15684622-A-G 13572742-A-G ***
15679786-A-G 13567906-A-G ***
16560046-G-T 14448166-G-T ***
15171522-C-A 13059608-C-A ***
14580928-C-T 12469128-C-T ***
14592260-A-C 12480460-A-C ***
14627027-C-A 12515095-C-A ***
14712604-T-G 12600671-T-G ***
14779468-A-C 12667538-A-C ***
14781066-C-A 12669136-C-A ***
14991351-C-A 12879436-C-A ***
15059773-C-A 12947865-C-A ***
15070607-A-T 12958698-A-T ***
15091700-C-A 12979789-C-A ***
15132860-C-A 13020947-C-A ***
15185397-C-A 13073483-C-A ***
15623393-T-A 13511513-T-A ***
15202588-C-A 13090674-C-A ***
15235478-G-A 13123564-G-A ***
15280768-C-A 13168867-C-A ***
15374554-C-A 13262674-C-A ***
15392159-T-C 13280279-T-C ***
15392160-G-T 13280280-G-T ***
15392166-G-A 13280286-G-A ***
15421306-T-G 13309426-T-G ***
15445522-C-A 13333642-C-A ***
15495066-A-C 13383186-A-C ***
15542136-C-A 13430256-C-A ***
16560043-G-T 14448163-G-T ***
16604911-C-A 14493031-C-A ***
14528552-G-C 12416753-G-C ***
18539059-A-C 16427179-A-C ***
18192077-T-C 16080197-T-C ***
18244582-C-A 16132702-C-A ***
18263856-C-A 16151976-C-A 26×A***
18283741-C-A 16171861-C-A P6_Prx ***
20998329-G-A 18836443-G-A P4_Dst ***
18321352-C-T 16209472-C-T P6_Prx ***
18398165-A-G 16286285-A-G P6_Gap ***
18443441-G-T 16331561-G-T P6_Dst ***
18447608-A-T 16335728-A-T P6_Dst ***
18523027-G-T 16411147-G-T P6_Dst ***
18539037-T-G 16427157-T-G ***
18653505-C-A 16541625-C-A ***
18050306-C-A 15938426-C-A ***
18701716-T-C 16589836-T-C ***
18756518-A-G 16644638-A-G ***
18768336-C-A 16656456-C-A ***
18812163-C-A 16700283-C-A ***
18928555-C-T 16816675-C-T ***
18937516-C-A 16825636-C-A ***
19135299-C-A 17023419-C-A ***
19183921-C-G 17072041-C-G ***
19235635-C-A 17123755-C-A ***
19310089-A-C 17198209-A-C ***
19311085-C-A 17199205-C-A ***
18191939-G-T 16080059-G-T ***
18040634-C-A 15928754-C-A ***
16652002-G-T 14540122-G-T ***
17126065-G-T 15014185-G-T ***
16719415-C-A 14607535-C-A ***
16739561-C-A 14627681-C-A ***
16786130-C-T 14674250-C-T ***
16827508-T-G 14715628-T-G ***
16831044-G-T 14719164-G-T ***
16843193-G-T 14731313-G-T ***
16929463-A-C 14817583-A-C ***
16941593-C-A 14829713-C-A ***
17046647-C-A 14934767-C-A ***
17122235-A-G 15010355-A-G ***
17126032-G-T 15014152-G-T ***
17142197-G-T 15030317-G-T ***
18035697-A-G 15923817-A-G ***
17142227-G-T 15030347-G-T ***
17153274-C-A 15041394-C-A ***
17157673-G-T 15045793-G-T ***
17307354-C-A 15195474-C-A ***
17315465-C-T 15203585-C-T ***
17402329-C-A 15290449-C-A ***
17489814-C-A 15377934-C-A ***
17737543-C-A 15625663-C-A ***
17849658-G-T 15737778-G-T ***
17849669-G-T 15737789-G-T ***
17850177-G-T 15738297-G-T ***
17859294-T-G 15747414-T-G ***
14539212-G-A 12427413-G-A ***
14509867-A-C 12398072-A-C ***
9329869-C-A 9492260-C-A ***
10086410-G-C 10248801-G-C ***
9951897-C-T 10114288-C-T ***
10011674-A-T 10174065-A-T ***
10026095-C-A 10188486-C-A ***
10041352-G-A 10203743-G-A ***
10041479-C-A 10203870-C-A ***
10042453-A-T 10204844-A-T ***
10043017-T-C 10205408-T-C ***
10043139-T-C 10205530-T-C ***
10043184-A-T 10205575-A-T ***
10086302-T-A 10248693-T-A ***
10086310-T-G 10248701-T-G ***
10096774-G-A 10259165-G-A ***
9951860-T-A 10114251-T-A ***
13130800-A-T 10620286-A-T ***
13140722-C-A 10630208-C-A ***
13196478-C-T 11040802-C-T ***
13212482-A-C 11056806-A-C ***
13223751-G-T 11068075-G-T ***
13250066-C-T 11094390-C-T ***
13291018-C-A 11135342-C-A ***
13360853-T-G 11205177-T-G ***
13372183-G-A 11216507-G-A ***
13433215-G-T 11277539-G-T ***
13433736-G-C 11278060-G-C ***
9951880-C-A 10114271-C-A ***
9951859-A-G 10114250-A-G ***
13461286-G-T 11305610-G-T ***
9909109-C-A 10071500-C-A ***
9330693-T-G 9493084-T-G ***
9494119-G-T 9656510-G-T ***
9517028-G-T 9679419-G-T ***
9529169-C-A 9691560-C-A IR3_Prx ***
9529183-T-G 9691574-T-G IR3_Prx ***
9529194-C-T 9691585-C-T IR3_Prx ***
9529203-A-G 9691594-A-G IR3_Prx ***
9540297-T-G 9702688-T-G IR3_Prx ***
9601615-C-A 9764006-C-A IR3_Prx ***
9626054-T-G 9788445-T-G IR3_Prx ***
9890502-C-A 10052893-C-A ***
9909121-A-G 10071512-A-G ***
9951075-A-G 10113466-A-G ***
9909127-T-C 10071518-T-C ***
9909145-G-A 10071536-G-A ***
9915592-G-T 10077983-G-T ***
9921839-C-T 10084230-C-T ***
9921846-C-G 10084237-C-G ***
9921886-T-C 10084277-T-C ***
9921915-A-G 10084306-A-G ***
9921949-C-A 10084340-C-A ***
9923925-T-C 10086316-T-C ***
9923940-C-A 10086331-C-A ***
9928189-C-A 10090580-C-A ***
9940684-C-T 10103075-C-T ***
13460953-G-T 11305277-G-T ***
13461293-A-G 11305617-A-G ***
14500222-G-T 12388427-G-T ***
14316333-G-T 12195627-G-T ***
14051708-C-A 11931002-C-A ***
14053556-C-A 11932850-C-A ***
14100947-G-T 11980241-G-T ***
14136167-A-T 12015461-A-T ***
14136302-C-A 12015596-C-A ***
14152952-C-A 12032246-C-A ***
14193075-C-A 12072369-C-A ***
14213207-G-A 12092501-G-A ***
14216328-C-A 12095622-C-A ***
14227612-G-A 12106906-G-A ***
14286880-C-A 12166174-C-A ***
14339454-G-A 12218749-G-A ***
13917434-C-A 11796728-C-A ***
14350082-G-A 12229377-G-A ***
14357762-C-A 12237057-C-A Z19072 ***
14377131-C-A 12256427-C-A ***
14377973-A-G 12257269-A-G ***
14380229-C-A 12259525-C-A ***
14395176-A-G 12274472-A-G ***
14422717-C-A 12301992-C-A ***
14425262-C-A 12304537-C-A ***
14425611-C-A 12304886-C-A ***
14443115-C-A 12322388-C-A ***
14463291-C-T 12342564-C-T 16×T***
13974254-G-T 11853548-G-T ***
13858277-T-A 11737571-T-A ***
13461321-G-T 11305645-G-T ***
13488904-G-A 11333228-G-A ***
13468042-C-A 11312366-C-A ***
13468052-C-G 11312376-C-G ***
13468110-C-A 11312434-C-A ***
13480651-T-C 11324975-T-C ***
13484478-G-A 11328802-G-A ***
13484483-G-A 11328807-G-A ***
13485733-G-A 11330057-G-A ***
13486557-G-C 11330881-G-C ***
13487776-G-C 11332100-G-C ***
13488861-G-A 11333185-G-A ***
13488869-C-G 11333193-C-G ***
13491072-C-A 11335396-C-A ***
13858258-G-T 11737552-G-T ***
13505017-C-A 11349341-C-A ***
13565532-A-G 11409856-A-G ***
13571053-G-T 11415377-G-T ***
13588793-T-C 11433117-T-C ***
13629226-C-A 11473550-C-A ***
13634393-T-C 11478717-T-C ***
13703415-G-T 11547739-G-T ***
13729937-T-A 11574261-T-A ***
13733875-T-C 11578199-T-C ***
13739733-G-A 11584057-G-A ***
13799492-A-T 11678786-A-T ***
13856300-A-T 11735594-A-T ***
58978024-G-GCATTCCATTC 56831877-G-GCATTCCATTC 4×CATTC***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.




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