Akins
FTDNA: 93803, BigY2: 93803Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 93803 | BigY2 93803 |
---|---|---|---|---|---|---|---|---|---|
19397847-C-T | 17285967-C-T | M3975 | Y | Y | + | + | |||
21473243-G-A | 19311357-G-A | Y76547 | Y | Y | + | + | |||
23491608-G-A | 21329722-G-A | Y79963 | Y | Y | + | + | |||
13195921-C-A | 11040245-C-A | ** | |||||||
11037912-C-A | ** | ||||||||
11031357-A-ACTC | ** | ||||||||
11030242-C-A | ** | ||||||||
11030182-C-A | ** | ||||||||
11029865-C-A | ** | ||||||||
11027855-C-A | ** | ||||||||
11027048-C-A | ** | ||||||||
11026726-C-A | ** | ||||||||
11025683-C-A | ** | ||||||||
11008973-C-A | ** | ||||||||
11006901-C-A | ** | ||||||||
10989051-C-G | ** | ||||||||
13457683-T-A | 11302007-T-A | ** | |||||||
13221994-G-A | 11066318-G-A | ** | |||||||
10939038-T-C | ** | ||||||||
10890209-T-C | ** | ||||||||
10890215-G-A | ** | ||||||||
10890221-C-G | ** | ||||||||
10890221-C-CAAACA | ** | ||||||||
10900499-C-A | ** | ||||||||
10936941-C-A | ** | ||||||||
10939042-A-ATTCCT | ** | ||||||||
10949483-C-A | ** | ||||||||
10939064-T-A | ** | ||||||||
10939082-A-T | ** | ||||||||
10939106-T-C | ** | ||||||||
10939122-G-T | ** | ||||||||
10939141-G-A | ** | ||||||||
10939148-G-T | ** | ||||||||
13209556-C-A | 11053880-C-A | ** | |||||||
13308329-C-A | 11152653-C-A | ** | |||||||
13236757-G-T | 11081081-G-T | ** | |||||||
11667549-G-T | ** | ||||||||
14191321-A-T | 12070615-A-T | ** | |||||||
14142345-T-C | 12021639-T-C | ** | |||||||
14086018-C-T | 11965312-C-T | ** | |||||||
14074867-C-A | 11954161-C-A | ** | |||||||
13954053-T-C | 11833347-T-C | ** | |||||||
13937449-C-A | 11816743-C-A | ** | |||||||
13930425-G-T | 11809719-G-T | ** | |||||||
13925877-C-A | 11805171-C-A | ** | |||||||
13920963-A-T | 11800257-A-T | ** | |||||||
13907146-G-T | 11786440-G-T | ** | |||||||
13874673-T-A | 11753967-T-A | ** | |||||||
13859137-C-A | 11738431-C-A | ** | |||||||
13809431-C-A | 11688725-C-A | ** | |||||||
11647869-T-A | ** | ||||||||
13296980-C-A | 11141304-C-A | ** | |||||||
11643579-G-A | ** | ||||||||
13597059-C-A | 11441383-C-A | ** | |||||||
13582367-G-T | 11426691-G-T | ** | |||||||
13580203-C-T | 11424527-C-T | ** | |||||||
13580163-G-A | 11424487-G-A | ** | |||||||
13573133-C-A | 11417457-C-A | ** | |||||||
13558985-C-A | 11403309-C-A | ** | |||||||
13508949-C-T | 11353273-C-T | ** | |||||||
13335183-C-A | 11179507-C-A | ** | |||||||
13327847-G-T | 11172171-G-T | ** | |||||||
13316087-C-A | 11160411-C-A | ** | |||||||
13315160-C-A | 11159484-C-A | ** | |||||||
13308783-C-A | 11153107-C-A | ** | |||||||
10890175-G-C | ** | ||||||||
10890208-A-C | ** | ||||||||
10868396-C-G | ** | ||||||||
10876645-C-A | ** | ||||||||
8051976-G-T | 8183935-G-T | ** | |||||||
9949148-A-C | 10111539-A-C | ** | |||||||
9928154-G-A | 10090545-G-A | ** | |||||||
9900190-C-A | 10062581-C-A | ** | |||||||
9830664-C-A | 9993055-C-A | ** | |||||||
9825606-A-C | 9987997-A-C | ** | |||||||
9666727-A-C | 9829118-A-C | IR3_Prx | ** | ||||||
9513142-C-A | 9675533-C-A | ** | |||||||
9194610-C-A | 9357001-C-A | ** | |||||||
8761914-C-A | 8893873-C-A | ** | |||||||
8661105-C-T | 8793064-C-T | ** | |||||||
8159093-G-T | 8291052-G-T | ** | |||||||
8140555-T-C | 8272514-T-C | ** | |||||||
8072690-G-A | 8204649-G-A | ** | |||||||
7917089-A-G | 8049048-A-G | ** | |||||||
9952072-CA-C | 10114463-CA-C | ** | |||||||
7754265-A-T | 7886224-A-T | ** | |||||||
7711658-A-G | 7843617-A-G | ** | |||||||
7709623-G-C | 7841582-G-C | ** | |||||||
7631258-A-G | 7763217-A-G | ** | |||||||
7621341-T-A | 7753300-T-A | ** | |||||||
7590537-C-A | 7722496-C-A | ** | |||||||
7390068-T-C | 7522027-T-C | ** | |||||||
7299363-C-A | 7431322-C-A | ** | |||||||
7257792-C-A | 7389751-C-A | ** | |||||||
7257726-G-T | 7389685-G-T | ** | |||||||
7214430-C-A | 7346389-C-A | ** | |||||||
3708734-C-A | 3840693-C-A | ** | |||||||
7113992-T-A | 7245951-T-A | ** | |||||||
7102078-AC-A | 7234037-AC-A | ** | |||||||
9949978-G-T | 10112369-G-T | ** | |||||||
10011090-G-T | 10173481-G-T | ** | |||||||
10875703-C-A | ** | ||||||||
10768480-C-A | ** | ||||||||
14253157-A-G | 12132451-A-G | ** | |||||||
10868395-A-C | ** | ||||||||
10868391-C-T | ** | ||||||||
10864200-C-A | ** | ||||||||
10857984-A-G | ** | ||||||||
10843514-T-G | ** | ||||||||
10832316-C-A | ** | ||||||||
10827003-C-A | ** | ||||||||
10820514-C-A | ** | ||||||||
10807904-G-A | ** | ||||||||
10794498-C-T | ** | ||||||||
10787566-C-A | ** | ||||||||
10785499-G-T | ** | ||||||||
10753335-C-T | ** | ||||||||
10024934-A-T | 10187325-A-T | ** | |||||||
10752389-C-A | ** | ||||||||
10690211-C-A | ** | ||||||||
10690122-C-A | ** | ||||||||
10688222-C-A | ** | ||||||||
10683306-A-G | ** | ||||||||
10673537-C-A | ** | ||||||||
10668665-C-T | ** | ||||||||
10660211-C-A | ** | ||||||||
10654463-A-T | ** | ||||||||
10653272-C-T | ** | ||||||||
10034059-C-A | 10196450-C-A | ** | |||||||
10033228-C-A | 10195619-C-A | ** | |||||||
10033063-C-A | 10195454-C-A | ** | |||||||
10026138-C-A | 10188529-C-A | ** | |||||||
14250660-G-T | 12129954-G-T | ** | |||||||
14253172-G-T | 12132466-G-T | ** | |||||||
14253169-G-C | 12132463-G-C | ** | |||||||
19556068-T-A | 17444188-T-A | ** | |||||||
22060231-C-A | 19898345-C-A | ** | |||||||
22056403-C-A | 19894517-C-A | ** | |||||||
21959162-T-A | 19797276-T-A | ** | |||||||
21746215-T-C | 19584329-T-C | ** | |||||||
21672106-C-A | 19510220-C-A | ** | |||||||
21552247-C-A | 19390361-C-A | ** | |||||||
21473969-T-G | 19312083-T-G | ** | |||||||
21457343-C-A | 19295457-C-A | ** | |||||||
21155187-C-A | 18993301-C-A | ** | |||||||
21124356-G-T | 18962470-G-T | ** | |||||||
20815478-C-A | 18653592-C-A | P4_Gap | ** | ||||||
20574966-A-T | 18413080-A-T | P5_Dst | ** | ||||||
19610301-G-A | 17498421-G-A | P5_Prx | ** | ||||||
19532563-C-A | 17420683-C-A | ** | |||||||
22594536-C-G | 20432650-C-G | ** | |||||||
19505310-C-A | 17393430-C-A | ** | |||||||
19433313-T-A | 17321433-T-A | ** | |||||||
19427077-C-T | 17315197-C-T | Y104698 | ** | ||||||
19393036-C-T | 17281156-C-T | ** | |||||||
19213573-C-A | 17101693-C-A | ** | |||||||
19146391-C-A | 17034511-C-A | ** | |||||||
19135346-C-A | 17023466-C-A | ** | |||||||
19088301-C-A | 16976421-C-A | ** | |||||||
19053419-G-T | 16941539-G-T | ** | |||||||
18847562-T-A | 16735682-T-A | ** | |||||||
18792638-T-G | 16680758-T-G | ** | |||||||
18754819-C-A | 16642939-C-A | ** | |||||||
18253321-C-A | 16141441-C-A | ** | |||||||
22170905-C-A | 20009019-C-A | ** | |||||||
22810633-C-A | 20648747-C-A | ** | |||||||
18158461-C-A | 16046581-C-A | ** | |||||||
28602269-C-A | 26456122-C-A | ** | |||||||
56877880-A-T | ** | ||||||||
56862514-A-T | ** | ||||||||
56857934-T-A | ** | ||||||||
56848607-C-A | ** | ||||||||
56848594-C-T | ** | ||||||||
56844445-C-A | ** | ||||||||
56844239-C-A | ** | ||||||||
28724381-T-A | 26578234-T-A | ** | |||||||
28653211-C-CAA | 26507064-C-CAA | ** | |||||||
28653206-A-G | 26507059-A-G | ** | |||||||
28624638-G-T | 26478491-G-T | ** | |||||||
28605225-G-GAA | 26459078-G-GAA | 10×A | ** | ||||||
28602312-C-A | 26456165-C-A | ** | |||||||
28536202-G-T | 26390055-G-T | ** | |||||||
22997558-C-A | 20835672-C-A | ** | |||||||
28500127-T-A | 26353980-T-A | ** | |||||||
28492778-C-A | 26346631-C-A | ** | |||||||
28474196-C-A | 26328049-C-A | ** | |||||||
28467610-A-G | 26321463-A-G | ** | |||||||
28463981-C-A | 26317834-C-A | ** | |||||||
27552637-AT-A | 25406490-AT-A | P1_Y2 | ** | ||||||
26046051-G-T | 23899904-G-T | P1_Y1 | ** | ||||||
25937195-T-TC | 23791048-T-TC | P1_Y1 | ** | ||||||
23789869-AT-A | 21627983-AT-A | ** | |||||||
23789857-G-A | 21627971-G-A | ** | |||||||
23350641-T-TA | 21188755-T-TA | ** | |||||||
23190030-C-A | 21028144-C-A | ** | |||||||
23185896-C-A | 21024010-C-A | ** | |||||||
23111768-G-A | 20949882-G-A | ** | |||||||
18189652-G-T | 16077772-G-T | ** | |||||||
18151771-G-T | 16039891-G-T | ** | |||||||
7087920-A-C | 7219879-A-C | ** | |||||||
15394855-C-T | 13282975-C-T | ** | |||||||
16165141-GA-G | 14053261-GA-G | P8_Dst | ** | ||||||
16146488-AAAG-A | 14034608-AAAG-A | P8_Dst | ** | ||||||
16146476-AAGAAAAG-A | 14034596-AAGAAAAG-A | P8_Dst | ** | ||||||
16020923-G-T | 13909043-G-T | ** | |||||||
16016240-T-C | 13904360-T-C | ** | |||||||
16008654-C-A | 13896774-C-A | ** | |||||||
15985522-C-A | 13873642-C-A | ** | |||||||
15792691-C-A | 13680811-C-A | ** | |||||||
15626704-T-G | 13514824-T-G | ** | |||||||
15468387-C-A | 13356507-C-A | ** | |||||||
15446841-C-A | 13334961-C-A | ** | |||||||
15424426-G-A | 13312546-G-A | ** | |||||||
15397370-A-T | 13285490-A-T | ** | |||||||
15084504-G-A | 12972594-G-A | ** | |||||||
16274106-G-A | 14162226-G-A | ** | |||||||
14981766-G-T | 12869842-G-T | ** | |||||||
14960219-C-A | 12848294-C-A | ** | |||||||
14799898-C-A | 12687969-C-A | ** | |||||||
14798597-C-A | 12686668-C-A | ** | |||||||
14685004-A-G | 12573070-A-G | ** | |||||||
14561737-G-T | 12449938-G-T | ** | |||||||
14549185-C-A | 12437386-C-A | ** | |||||||
14544141-A-G | 12432342-A-G | ** | |||||||
14526367-A-G | 12414568-A-G | ** | |||||||
14524602-C-T | 12412803-C-T | ** | |||||||
14473584-C-A | 12352853-C-A | ** | |||||||
14422416-T-C | 12301691-T-C | ** | |||||||
14385250-G-A | 12264546-G-A | ** | |||||||
14253179-C-T | 12132473-C-T | ** | |||||||
16214865-T-A | 14102985-T-A | ** | |||||||
16278515-C-A | 14166635-C-A | ** | |||||||
18120711-G-T | 16008831-G-T | ** | |||||||
17213141-A-C | 15101261-A-C | ** | |||||||
17953745-T-C | 15841865-T-C | ** | |||||||
17916199-A-G | 15804319-A-G | ** | |||||||
17913047-G-T | 15801167-G-T | ** | |||||||
17886137-G-T | 15774257-G-T | ** | |||||||
17871724-C-A | 15759844-C-A | ** | |||||||
17787133-G-GA | 15675253-G-GA | ** | |||||||
17787126-G-A | 15675246-G-A | ** | |||||||
17524069-C-A | 15412189-C-A | ** | |||||||
17512622-C-A | 15400742-C-A | ** | |||||||
17431256-C-A | 15319376-C-A | ** | |||||||
17426981-C-A | 15315101-C-A | ** | |||||||
17342893-C-A | 15231013-C-A | ** | |||||||
17277273-C-A | 15165393-C-A | ** | |||||||
17183316-G-T | 15071436-G-T | ** | |||||||
16384400-C-A | 14272520-C-A | ** | |||||||
17122391-C-A | 15010511-C-A | ** | |||||||
17122368-C-A | 15010488-C-A | ** | |||||||
16974285-G-T | 14862405-G-T | ** | |||||||
16968435-T-A | 14856555-T-A | ** | |||||||
16897636-T-G | 14785756-T-G | ** | |||||||
16720728-G-T | 14608848-G-T | ** | |||||||
16701647-C-A | 14589767-C-A | ** | |||||||
16526582-C-A | 14414702-C-A | ** | |||||||
16499339-T-C | 14387459-T-C | ** | |||||||
16429966-C-A | 14318086-C-A | ** | |||||||
16424933-C-T | 14313053-C-T | ** | |||||||
16421600-G-T | 14309720-G-T | ** | |||||||
16421068-A-T | 14309188-A-T | ** | |||||||
16411226-C-A | 14299346-C-A | ** | |||||||
7087922-C-T | 7219881-C-T | ** | |||||||
7132795-C-A | 7264754-C-A | ** | |||||||
7086730-G-A | 7218689-G-A | ** | |||||||
10890205-G-C | ** | ||||||||
18190455-C-A | 16078575-C-A | ** | |||||||
10997147-T-C | ** | ||||||||
56699886-G-A | ** | ||||||||
10825280-C-CGGATTA | ** | ||||||||
10032756-C-A | 10195147-C-A | ** | |||||||
15368546-C-A | 13256666-C-A | ** | |||||||
4292835-TAAA-T | 4424794-TAAA-T | 13×A | ** | ||||||
17254918-C-A | 15143038-C-A | ** | |||||||
4534300-GT-G | 4666259-GT-G | 10×T | ** | ||||||
56859782-C-T | ** | ||||||||
13856348-G-GAATGTTAAAGAATCA | 11735642-G-GAATGTTAAAGAATCA | ** | |||||||
56859741-G-A | ** | ||||||||
10683440-C-A | ** | ||||||||
26014748-T-G | 23868601-T-G | P1_Y1 | ** | ||||||
10868401-C-T | ** | ||||||||
10760382-C-CTCTACGGCTT | ** | ||||||||
13594308-C-A | 11438632-C-A | ** | |||||||
28732058-T-G | 26585911-T-G | ** | |||||||
14017511-C-A | 11896805-C-A | ** | |||||||
26477922-AACAC-A | 24331775-AACAC-A | P1_Y1 | 14×AC | ** | |||||
11015189-C-A | ** | ||||||||
26463135-AC-A | 24316988-AC-A | P1_Y1 | ** | ||||||
14910792-A-G | 12798859-A-G | ** | |||||||
15971225-C-CTT | 13859345-C-CTT | 18×T | ** | ||||||
10760402-T-TCCAC | ** | ||||||||
23127946-C-A | 20966060-C-A | ** | |||||||
23779766-G-T | 21617880-G-T | ** | |||||||
5335328-C-A | 5467287-C-A | ** | |||||||
5683983-G-T | 5815942-G-T | ** | |||||||
19183851-C-A | 17071971-C-A | ** | |||||||
4919477-C-A | 5051436-C-A | ** | |||||||
10760478-C-A | ** | ||||||||
13870726-C-A | 11750020-C-A | ** | |||||||
25395691-G-T | 23249544-G-T | P2_r2 | ** | ||||||
5264361-G-T | 5396320-G-T | ** | |||||||
10045312-C-A | 10207703-C-A | ** | |||||||
6063383-C-A | 6195342-C-A | ** | |||||||
10976239-T-C | ** | ||||||||
9934837-C-A | 10097228-C-A | ** | |||||||
13597091-C-A | 11441415-C-A | ** | |||||||
7044341-T-C | 7176300-T-C | ** | |||||||
28653195-G-A | 26507048-G-A | ** | |||||||
10954343-C-CTCCGT | ** | ||||||||
6948364-C-A | 7080323-C-A | ** | |||||||
9442190-C-A | 9604581-C-A | ** | |||||||
10961479-C-T | ** | ||||||||
27583000-C-CTTTT | 25436853-C-CTTTT | P1_Y2 | 22×T | ** | |||||
28692520-G-A | 26546373-G-A | ** | |||||||
23317713-C-A | 21155827-C-A | ** | |||||||
6830692-C-A | 6962651-C-A | ** | |||||||
7087924-C-T | 7219883-C-T | ** | |||||||
14253148-G-A | 12132442-G-A | ** | |||||||
14253147-T-C | 12132441-T-C | ** | |||||||
28369908-C-A | 26223761-C-A | P1_gr2 | ** | ||||||
22429118-C-A | 20267232-C-A | DYZ19 | ** | ||||||
15792759-C-A | 13680879-C-A | ** | |||||||
10889118-C-A | ** | ||||||||
14506829-C-A | 12395034-C-A | ** | |||||||
13257481-A-G | 11101805-A-G | ** | |||||||
10985208-C-CCTTTT | ** | ||||||||
21220946-C-A | 19059060-C-A | ** | |||||||
11001579-C-T | ** | ||||||||
24728108-C-A | 22581961-C-A | P3_b2 | ** | ||||||
18443552-C-CAT | 16331672-C-CAT | P6_Dst | ** | ||||||
10763081-C-T | ** | ||||||||
15963804-C-A | 13851924-C-A | ** | |||||||
14245190-CA-C | 12124484-CA-C | 9×A | ** | ||||||
10954433-C-T | ** | ||||||||
16786148-G-A | 14674268-G-A | ** | |||||||
21500419-C-A | 19338533-C-A | ** | |||||||
17946944-G-TTT | 15835064-G-TTT | ** | |||||||
9636059-T-TC | 9798450-T-TC | IR3_Prx | ** | ||||||
11001604-C-G | ** | ||||||||
11001599-C-G | ** | ||||||||
21635215-C-A | 19473329-C-A | ** | |||||||
18554384-C-A | 16442504-C-A | ** | |||||||
17787129-G-A | 15675249-G-A | ** | |||||||
6634259-G-GTT | 6766218-G-GTT | 15×T | ** | ||||||
17527327-C-CAT | 15415447-C-CAT | 8×AT | ** | ||||||
22296113-A-G | 20134227-A-G | DYZ19 | ** | ||||||
15410626-T-C | 13298746-T-C | ** | |||||||
5800665-C-A | 5932624-C-A | ** | |||||||
4416884-A-AC | 4548843-A-AC | ** | |||||||
5872243-CA-C | 6004202-CA-C | 15×A | ** | ||||||
14420787-CT-C | 12300062-CT-C | 18×T | ** | ||||||
19183496-A-C | 17071616-A-C | ** | |||||||
17787133-G-A | 15675253-G-A | ** | |||||||
4968368-G-T | 5100327-G-T | FGC204 | ** | ||||||
4382467-G-A | 4514426-G-A | ** | |||||||
4616845-C-A | 4748804-C-A | ** | |||||||
10954327-A-T | ** | ||||||||
27971647-C-A | 25825500-C-A | P1_Y2 | ** | ||||||
17006261-CTTT-C | 14894381-CTTT-C | 17×T | ** | ||||||
2665661-C-A | 2797620-C-A | ** | |||||||
14598637-C-A | 12486837-C-A | ** | |||||||
14118245-GTTT-G | 11997539-GTTT-G | 13×T | ** | ||||||
21084437-ATT-A | 18922551-ATT-A | 12×T | ** | ||||||
56839148-C-T | ** | ||||||||
5084185-CTT-C | 5216144-CTT-C | 14×T | ** | ||||||
15323661-C-CAA | 13211779-C-CAA | 18×A | ** | ||||||
56835786-G-A | ** | ||||||||
10985219-C-CCATCT | ** | ||||||||
13927454-C-A | 11806748-C-A | ** | |||||||
24634099-G-T | 22487952-G-T | P3_t2 | ** | ||||||
16232437-C-A | 14120557-C-A | ** | |||||||
10755324-T-C | ** | ||||||||
13258558-CTT-C | 11102882-CTT-C | 20×T | ** | ||||||
23825089-TGA-T | 21663203-TGA-T | ** | |||||||
5117964-G-GA | 5249923-G-GA | 9×A | ** | ||||||
3965375-C-A | 4097334-C-A | ** | |||||||
10664767-T-A | ** | ||||||||
13798653-G-T | 11677947-G-T | ** | |||||||
10755322-C-T | ** | ||||||||
11001573-C-CCACTG | ** | ||||||||
11001569-C-T | ** | ||||||||
14041027-C-A | 11920321-C-A | ** | |||||||
26100545-G-TT | 23954398-G-TT | P1_Y1 | ** | ||||||
18873937-C-A | 16762057-C-A | ** | |||||||
21367690-ATT-A | 19205804-ATT-A | 14×T | ** | ||||||
13856336-T-TCAAAC | 11735630-T-TCAAAC | ** | |||||||
13856328-G-GCATGC | 11735622-G-GCATGC | ** | |||||||
11016261-C-A | ** | ||||||||
10939086-C-T | ** | ||||||||
11659745-C-A | ** | ||||||||
4351520-C-A | 4483479-C-A | ** | |||||||
5054651-C-A | 5186610-C-A | ** | |||||||
5029728-A-C | 5161687-A-C | ** | |||||||
5011134-C-A | 5143093-C-A | ** | |||||||
4992364-C-A | 5124323-C-A | ** | |||||||
4970080-G-T | 5102039-G-T | ** | |||||||
4937027-GC-G | 5068986-GC-G | ** | |||||||
4926022-G-T | 5057981-G-T | ** | |||||||
4908713-A-G | 5040672-A-G | ** | |||||||
4892129-T-A | 5024088-T-A | ** | |||||||
4866988-C-A | 4998947-C-A | ** | |||||||
4460922-C-A | 4592881-C-A | ** | |||||||
4444920-C-T | 4576879-C-T | ** | |||||||
4382480-G-A | 4514439-G-A | ** | |||||||
4320343-C-T | 4452302-C-T | ** | |||||||
5186788-A-G | 5318747-A-G | ** | |||||||
4310222-C-A | 4442181-C-A | ** | |||||||
4298785-T-C | 4430744-T-C | ** | |||||||
4245169-C-A | 4377128-C-A | ** | |||||||
4180194-C-A | 4312153-C-A | ** | |||||||
4140035-G-T | 4271994-G-T | ** | |||||||
4094919-T-G | 4226878-T-G | ** | |||||||
4094076-C-A | 4226035-C-A | ** | |||||||
4077537-C-T | 4209496-C-T | ** | |||||||
16704932-T-A | 14593052-T-A | ** | |||||||
4002306-A-G | 4134265-A-G | ** | |||||||
3986962-T-C | 4118921-T-C | ** | |||||||
3928299-A-T | 4060258-A-T | ** | |||||||
3785277-G-T | 3917236-G-T | ** | |||||||
3760061-G-T | 3892020-G-T | ** | |||||||
5101208-GTT-G | 5233167-GTT-G | 11×T | ** | ||||||
5219199-C-A | 5351158-C-A | ** | |||||||
3695861-C-A | 3827820-C-A | ** | |||||||
6023546-A-T | 6155505-A-T | ** | |||||||
7042844-C-A | 7174803-C-A | ** | |||||||
6996714-G-A | 7128673-G-A | ** | |||||||
6930756-C-A | 7062715-C-A | ** | |||||||
6917615-A-G | 7049574-A-G | ** | |||||||
6798818-C-G | 6930777-C-G | ** | |||||||
6732506-C-A | 6864465-C-A | ** | |||||||
6686700-C-T | 6818659-C-T | ** | |||||||
6634287-A-G | 6766246-A-G | ** | |||||||
6540981-A-G | 6672940-A-G | ** | |||||||
6508135-C-A | 6640094-C-A | ** | |||||||
6444805-G-A | 6576764-G-A | ** | |||||||
6366397-G-T | 6498356-G-T | ** | |||||||
6132098-T-C | 6264057-T-C | ** | |||||||
6063210-C-CT | 6195169-C-CT | 9×T | ** | ||||||
5990386-G-T | 6122345-G-T | ** | |||||||
5334133-C-A | 5466092-C-A | ** | |||||||
5990346-A-T | 6122305-A-T | ** | |||||||
5937318-A-G | 6069277-A-G | ** | |||||||
5916521-C-A | 6048480-C-A | ** | |||||||
5874359-A-T | 6006318-A-T | ** | |||||||
5874355-T-G | 6006314-T-G | ** | |||||||
5768060-T-C | 5900019-T-C | ** | |||||||
5688532-G-A | 5820491-G-A | ** | |||||||
5661773-C-A | 5793732-C-A | ** | |||||||
5634391-C-A | 5766350-C-A | ** | |||||||
5556057-G-T | 5688016-G-T | ** | |||||||
5556043-G-T | 5688002-G-T | ** | |||||||
5555971-G-T | 5687930-G-T | ** | |||||||
5425028-T-C | 5556987-T-C | ** | |||||||
5350591-T-G | 5482550-T-G | ** | |||||||
3700043-G-T | 3832002-G-T | ** | |||||||
4018194-G-T | 4150153-G-T | ** | |||||||
3666613-T-C | 3798572-T-C | ** | |||||||
3851626-C-A | 3983585-C-A | ** | |||||||
13930171-C-CA | 11809465-C-CA | 21×A | ** | ||||||
10890190-C-T | ** | ||||||||
22132441-C-A | 19970555-C-A | ** | |||||||
10954325-C-A | ** | ||||||||
13993393-C-A | 11872687-C-A | ** | |||||||
3620754-C-A | 3752713-C-A | ** | |||||||
14361676-C-A | 12240971-C-A | ** | |||||||
9931363-G-GT | 10093754-G-GT | 9×T | ** | ||||||
7210085-C-A | 7342044-C-A | ** | |||||||
21617689-G-A | 19455803-G-A | ** | |||||||
6769997-C-A | 6901956-C-A | ** | |||||||
10763087-A-ACTCAT | ** | ||||||||
14470526-C-A | 12349795-C-A | ** | |||||||
11033370-T-C | ** | ||||||||
10692899-G-C | ** | ||||||||
5223302-C-CAA | 5355261-C-CAA | 16×A | ** | ||||||
20771926-A-AG | 18610040-A-AG | P4_Prx | ** | ||||||
16842684-C-A | 14730804-C-A | ** | |||||||
17029018-C-A | 14917138-C-A | ** | |||||||
10939124-G-T | ** | ||||||||
4382472-G-A | 4514431-G-A | ** | |||||||
23512336-C-A | 21350450-C-A | ** | |||||||
11027033-C-T | ** | ||||||||
8713020-C-A | 8844979-C-A | ** | |||||||
30802-C-A | ** | ||||||||
2936855-G-T | 3068814-G-T | ** | |||||||
3442705-G-T | 3574664-G-T | ** | |||||||
3408076-C-A | 3540035-C-A | ** | |||||||
3400208-G-A | 3532167-G-A | ** | |||||||
3389515-A-G | 3521474-A-G | ** | |||||||
3330384-G-T | 3462343-G-T | ** | |||||||
3148616-C-G | 3280575-C-G | ** | |||||||
3118533-A-T | 3250492-A-T | ** | |||||||
3114311-G-T | 3246270-G-T | ** | |||||||
3112421-C-A | 3244380-C-A | ** | |||||||
3093830-A-C | 3225789-A-C | ** | |||||||
3053317-G-T | 3185276-G-T | ** | |||||||
3047454-C-A | 3179413-C-A | ** | |||||||
2978926-A-T | 3110885-A-T | ** | |||||||
3093011-G-T | 3224970-G-T | ** | |||||||
2856563-C-A | 2988522-C-A | ** | |||||||
22211376-C-A | 20049490-C-A | ** | |||||||
15252803-CAA-C | 13140889-CAA-C | 19×A | *** | ||||||
58975147-G-C,GTTCCC | 56829000-G-C,GTTCCC | *** | |||||||
15480109-CTA-C | 13368229-CTA-C | *** | |||||||
13829029-G-A | 11708323-G-A | *** | |||||||
58912868-C-CA | 56678001-A-AT | *** | |||||||
13810008-G-C | 11689302-G-C | *** | |||||||
26544618-GAT-G | 24398471-GAT-G | P1_g2 | 14×AT | *** | |||||
14200656-C-A | 12079950-C-A | *** | |||||||
10997143-T-G | *** | ||||||||
2772938-C-A | 2904897-C-A | *** | |||||||
19508177-CTTTT-C,CTT | 17396297-CTTTT-C,CTT | 19×T | *** | ||||||
13462154-A-C | 11306478-A-C | *** | |||||||
13642484-T-C | 11486808-T-C | *** | |||||||
13446012-G-A | 11290336-G-A | *** | |||||||
10754934-C-CTCCATTCCAT | *** | ||||||||
17596810-ATCTC-A | 15484930-ATCTC-A | 10×TC | *** | ||||||
10670960-C-A | *** | ||||||||
13857570-G-GGGCTC | 11736864-G-GGGCTC | *** | |||||||
16018318-CA-C | 13906438-CA-C | 8×A | *** | ||||||
21813832-C-A | 19651946-C-A | *** | |||||||
21708363-C-A | 19546477-C-A | *** | |||||||
3012741-C-CAT | 3144700-C-CAT | *** | |||||||
21708364-T-C | 19546478-T-C | *** | |||||||
7401140-AT-A,ATT | 7533099-AT-A,ATT | 14×T | *** | ||||||
14848913-CT-C,CTT | 12736979-CT-C,CTT | 14×T | *** | ||||||
56833338-CTCTAC-C,CTCCAT | *** | ||||||||
10952920-C-A | *** | ||||||||
19129793-T-TAA | 17017913-T-TAA | 13×A | *** | ||||||
15320645-A-T | 13208751-A-T | *** | |||||||
15402957-C-A | 13291077-C-A | *** | |||||||
11022873-TTTCCA-T | *** | ||||||||
21237900-C-T | 19076014-C-T | *** | |||||||
22580068-CTTTT-C | 20418182-CTTTT-C | 19×T | *** | ||||||
10894538-C-A | *** | ||||||||
10911957-C-A | *** | ||||||||
2784296-G-T | 2916255-G-T | *** | |||||||
24369642-G-A | 22223495-G-A | *** | |||||||
16244792-GGTGTGTGT-G,GGTGT | 14132912-GGTGTGTGT-G,GGTGT | 16×GT | *** | ||||||
10861386-C-A | *** | ||||||||
19249545-A-G | 17137665-A-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Big Tree Main Page