Tree Position

R-P312/S116 > Z40481 > ZZ11 > U152/S28 > L2/S139 > Z41150 > FGC22538 > FGC22500 > FGC22503

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
7Z8F5
6599158-C-G 6731117-C-G FGC22511 +
21214424-G-A 19052538-G-A FGC22541 YY+
15701174-C-T 13589294-C-T FGC22529 YY+
15378097-G-A 13266217-G-A FGC22527 Y+
13456911-C-T 11301235-C-T FGC22518 +
14669468-A-G 12557534-A-G FGC22523 Y+
13912894-G-A 11792188-G-A FGC22521 Y+
23103215-G-C 20941329-G-C FGC22545 Y+
22517892-C-T 20356006-C-T FGC22544 Y+
13130909-C-T 10620395-C-T FGC22517 +
21378611-T-A 19216725-T-A FGC22542 Y*
15961594-G-T 13849714-G-T FGC22531 Y*
3376519-C-G 3508478-C-G FGC22504 *
5234020-G-A 5365979-G-A FGC22507 *
13526386-T-C 11370710-T-C FGC22519 *
6472261-T-G 6604220-T-G FGC22510 *
5324258-C-T 5456217-C-T FGC22508 *
21883602-AGTG-A 19721716-AGTG-A *
22268376-T-G 20106490-T-G DYZ19 **
14990988-C-G 12879073-C-G **
13405370-G-A 11249694-G-A **
13475407-G-A 11319731-G-A **
15749173-C-A 13637293-C-A **
22366097-G-T 20204211-G-T DYZ19 **
15749241-A-C 13637361-A-C **
28487703-C-G 26341556-C-G **
13606877-C-CAAAAAAAAA 11451201-C-CAAAAAAAAA 25×A**
23773323-T-TACAC 21611437-T-TACAC 24×AC**
22236505-C-A 20074619-C-A DYZ19 **
13840815-CGAATGGAATG-C 11720109-CGAATGGAATG-C 9×GAATG**
13326824-A-G 11171148-A-G **
27535086-G-C 25388939-G-C P1_Y2 **
13407141-C-CTTCTTTTT 11251465-C-CTTCTTTTT 13×T**
19937297-CA-C 17825417-CA-C P5_Prx **
13475403-G-T 11319727-G-T **
27366017-G-T 25219870-G-T P1_g3 ***
27780539-A-T 25634392-A-T P1_Y2 ***
27366032-G-A 25219885-G-A P1_g3 ***
27366035-G-T 25219888-G-T P1_g3 ***
27715844-A-G 25569697-A-G P1_Y2 ***
27381008-T-A 25234861-T-A P1_g3 ***
27715838-T-A 25569691-T-A P1_Y2 ***
27366040-A-T 25219893-A-T P1_g3 ***
27381037-G-A 25234890-G-A P1_g3 ***
27715833-C-G 25569686-C-G P1_Y2 ***
27715830-T-G 25569683-T-G P1_Y2 ***
28107423-T-A 25961276-T-A P1_Y2 ***
27692257-A-T 25546110-A-T P1_Y2 ***
27604076-A-T 25457929-A-T P1_Y2 ***
27604064-G-A 25457917-G-A P1_Y2 ***
27381041-T-A 25234894-T-A P1_g3 ***
27715837-T-A 25569690-T-A P1_Y2 ***
26902325-T-A 24756178-T-A P1_r3 ***
28107426-T-G 25961279-T-G P1_Y2 ***
58840402-T-A 56750469-A-T ***
58870605-A-T 56720266-T-A ***
58854308-C-T 56736563-G-A ***
58854275-T-G 56736596-A-C ***
58849248-C-A 56741623-G-T ***
58845444-T-A 56745427-A-T ***
58845438-C-T 56745433-G-A ***
58843680-C-G 56747191-G-C ***
58840629-G-C 56750242-C-G ***
58840412-A-T 56750459-T-A ***
58840400-C-T 56750471-G-A ***
28107431-G-T 25961284-G-T P1_Y2 ***
58840396-C-A 56750475-G-T ***
58838256-G-A 56752615-C-T ***
58823122-G-C 56767749-C-G ***
28454240-G-A 26308093-G-A P1_gr2 ***
28375668-G-A 26229521-G-A P1_gr2 ***
28375653-T-A 26229506-T-A P1_gr2 14×A***
27365988-G-A 25219841-G-A P1_g3 ***
28107466-T-G 25961319-T-G P1_Y2 ***
28107465-T-A 25961318-T-A P1_Y2 ***
28107458-A-C 25961311-A-C P1_Y2 ***
27365997-G-T 25219850-G-T P1_g3 ***
26340006-A-T 24193859-A-T P1_Y1 ***
27365987-C-A 25219840-C-A P1_g3 ***
22421661-C-T 20259775-C-T DYZ19 ***
24278518-C-A 22132371-C-A P3_b1 ***
24278494-A-C 22132347-A-C P3_b1 ***
23110102-T-C 20948216-T-C ***
22491337-A-T 20329451-A-T DYZ19 ***
22435107-T-A 20273221-T-A DYZ19 ***
22435099-A-C 20273213-A-C DYZ19 ***
22433325-C-T 20271439-C-T DYZ19 ***
22433208-T-C 20271322-T-C DYZ19 ***
22433162-G-T 20271276-G-T DYZ19 ***
22431889-G-T 20270003-G-T DYZ19 ***
22431886-C-A 20270000-C-A DYZ19 ***
22431861-A-T 20269975-A-T DYZ19 ***
22421685-C-A 20259799-C-A DYZ19 ***
22421663-C-A 20259777-C-A DYZ19 ***
22421656-T-C 20259770-T-C DYZ19 ***
25207916-G-A 23061769-G-A P2_r1 ***
22361184-C-G 20199298-C-G DYZ19 ***
22354233-T-A 20192347-T-A DYZ19 ***
22354264-A-T 20192378-A-T DYZ19 ***
22355591-G-T 20193705-G-T DYZ19 ***
22355626-A-G 20193740-A-G DYZ19 ***
22359154-C-T 20197268-C-T DYZ19 ***
22359219-T-G 20197333-T-G DYZ19 ***
22362759-T-A 20200873-T-A DYZ19 ***
22421462-A-T 20259576-A-T DYZ19 ***
22366670-T-A 20204784-T-A DYZ19 ***
22420485-C-A 20258599-C-A DYZ19 ***
22420502-T-G 20258616-T-G DYZ19 ***
22420503-A-T 20258617-A-T DYZ19 ***
22421385-C-T 20259499-C-T DYZ19 ***
22421393-A-T 20259507-A-T DYZ19 ***
24278522-A-C 22132375-A-C P3_b1 ***
25207917-T-A 23061770-T-A P2_r1 ***
27202855-A-T 25056708-A-T P1_g3 ***
25913887-G-A 23767740-G-A P1_Y1 ***
27061280-G-A 24915133-G-A P1_r4 ***
26340008-G-T 24193861-G-T P1_Y1 ***
58874505-A-T 56716366-T-A ***
26339985-G-C 24193838-G-C P1_Y1 ***
26339984-T-C 24193837-T-C P1_Y1 ***
26339963-G-A 24193816-G-A P1_Y1 ***
26339913-T-C 24193766-T-C P1_Y1 ***
26286034-G-A 24139887-G-A P1_Y1 ***
26249275-A-T 24103128-A-T P1_Y1 ***
26121591-A-G 23975444-A-G P1_Y1 ***
26038939-G-C 23892792-G-C P1_Y1 ***
26038936-T-C 23892789-T-C P1_Y1 ***
26038896-T-G 23892749-T-G P1_Y1 ***
25913893-G-T 23767746-G-T P1_Y1 ***
25913885-G-T 23767738-G-T P1_Y1 ***
25595645-C-T 23449498-C-T P1_gr1 ***
25913831-C-T 23767684-C-T P1_Y1 ***
25595646-A-T 23449499-A-T P1_gr1 ***
25595653-A-T 23449506-A-T P1_gr1 ***
25595710-G-A 23449563-G-A P1_gr1 ***
25595714-A-G 23449567-A-G P1_gr1 ***
25595719-C-G 23449572-C-G P1_gr1 ***
25606304-T-A 23460157-T-A P1_gr1 ***
25913837-C-T 23767690-C-T P1_Y1 ***
25913883-G-A 23767736-G-A P1_Y1 ***
25913839-G-T 23767692-G-T P1_Y1 ***
25913845-G-T 23767698-G-T P1_Y1 ***
25913846-C-T 23767699-C-T P1_Y1 ***
25913847-A-T 23767700-A-T P1_Y1 ***
25913852-A-T 23767705-A-T P1_Y1 ***
25913853-G-T 23767706-G-T P1_Y1 ***
58874450-A-T 56716421-T-A ***
58890378-T-C 56700493-A-G ***
58874519-T-G 56716352-A-C ***
22335490-AATC-CTTT 20173604-AATC-CTTT DYZ19 ***
22362728-GTTT-ATTA 20200842-GTTT-ATTA DYZ19 ***
22356006-GTTC-TTAT 20194120-GTTC-TTAT DYZ19 ***
22355106-GTTATG-TTTGTT 20193220-GTTATG-TTTGTT DYZ19 ***
22344684-TG-T 20182798-TG-T DYZ19 ***
22344683-GTG-CT 20182797-GTG-CT DYZ19 ***
22344679-C-CT 20182793-C-CT DYZ19 ***
22344617-GC-CT 20182731-GC-CT DYZ19 ***
22338638-CTTG-ATTT 20176752-CTTG-ATTT DYZ19 ***
22338626-AAGT-CAGG 20176740-AAGT-CAGG DYZ19 ***
22338607-TAGAA-CAGAG 20176721-TAGAA-CAGAG DYZ19 ***
22337322-TTTAT-GTTAG 20175436-TTTAT-GTTAG DYZ19 ***
22336135-GG-T 20174249-GG-T DYZ19 ***
22336097-GTT-TTG 20174211-GTT-TTG DYZ19 ***
22333488-GGCAG-AGCAA 20171602-GGCAG-AGCAA DYZ19 ***
22420485-CTTCA-ATTCG 20258599-CTTCA-ATTCG DYZ19 ***
22333475-GT-TA 20171589-GT-TA DYZ19 ***
22333457-CCTTGT-ACTTCA 20171571-CCTTGT-ACTTCA DYZ19 ***
22328185-GG-TT 20166299-GG-TT DYZ19 ***
22324809-TTTA-CTT 20162923-TTTA-CTT DYZ19 ***
22322005-CAGG-GAGT 20160119-CAGG-GAGT DYZ19 ***
22306454-AT-CC 20144568-AT-CC DYZ19 ***
22289678-CTT-AAG 20127792-CTT-AAG DYZ19 ***
22283417-GAGT-CAGG 20121531-GAGT-CAGG DYZ19 ***
22276700-GGTGT-TACGG 20114814-GGTGT-TACGG DYZ19 ***
22276678-G-CAAGA 20114792-G-CAAGA DYZ19 ***
22276648-TTTCG-CTTCT 20114762-TTTCG-CTTCT DYZ19 ***
22276640-AT-TA 20114754-AT-TA DYZ19 ***
22276620-GTTC-TTAT 20114734-GTTC-TTAT DYZ19 ***
22276240-ATT-GTA 20114354-ATT-GTA DYZ19 ***
22366932-GGT-AGA 20205046-GGT-AGA DYZ19 ***
22420502-TA-AT 20258616-TA-AT DYZ19 ***
22273865-ATAT-TCAG 20111979-ATAT-TCAG DYZ19 ***
58831301-CT-AA 56759569-AG-TT ***
58874511-TTCC-ATCT 56716357-GGAA-AGAT ***
58874495-CTTCCATT-ATTC 56716369-AATGGAAG-GAAT ***
58874488-CCT-ACA 56716381-AGG-TGT ***
58874474-CAATAG-C 56716390-ATCTAT-A ***
58874460-ATTACAGTCC-TTTCCATACT 56716402-GGACTGTAAT-AGTATGGAAA ***
58874441-ATCCC-CTCCA 56716426-GGGAT-TGGAG ***
58873135-CCTTTCCAG-TTTTTGCAT 56717728-CTGGAAAGG-ATGCAAAAA ***
58873125-T-TTTG 56717745-C-CCAA ***
58873123-T-TGA 56717747-A-ATC ***
58873116-CTT-TTTCCAG 56717753-AAG-CTGGAAA ***
58868288-ATTCCGTTCGATTCCC-A 56722563-TGGAAGGGAATCGAAC-T ***
58844953-TTCG-CTCC 56745915-CGAA-GGAG ***
58844945-CCAT-GCAC 56745923-ATGG-GTGC ***
58836218-ATTCCATTCCATTGGG-A 56754637-CCCCAATGGAATGGAA-C ***
28802793-GGACAT-G 26656646-GGACAT-G ***
22420540-CAAAA-C 20258654-CAAAA-C DYZ19 ***
28802774-GAATGCGGTGA-G 26656627-GAATGCGGTGA-G ***
28797890-ATGCGGTGAAG-GTGCAATGGAC 26651743-ATGCGGTGAAG-GTGCAATGGAC ***
28491336-A-AAAAAAAAACACCCC 26345189-A-AAAAAAAAACACCCC ***
28076525-TTC-T 25930378-TTC-T P1_Y2 ***
26099827-G-GTC 23953680-G-GTC P1_Y1 27×TC***
25505115-CTAA-TTTT 23358968-CTAA-TTTT P1_gr1 ***
25505105-CTTTGTCA-TTTTTT 23358958-CTTTGTCA-TTTTTT P1_gr1 ***
24836731-GGAGGGAA-AGAAGGAG 22690584-GGAGGGAA-AGAAGGAG P3_b2 ***
24415739-TA-T 22269592-TA-T ***
24013847-CTATATATATA-C 21867700-CTATATATATA-C 21×TA***
22490883-GTTCA-TTTCG 20328997-GTTCA-TTTCG DYZ19 ***
22435119-ACCT-CGCG 20273233-ACCT-CGCG DYZ19 ***
22431886-CGCG-AGCT 20270000-CGCG-AGCT DYZ19 ***
22421869-ATGTC-GTGTG 20259983-ATGTC-GTGTG DYZ19 ***
22276204-GG-TT 20114318-GG-TT DYZ19 ***
22267531-AT-CC 20105645-AT-CC DYZ19 ***
58877072-T-C 56713799-A-G ***
22322050-TAC-AGT 20160164-TAC-AGT DYZ19 ***
13222935-GGAGGGA-G 11067259-GGAGGGA-G ***
13222927-AGAGG-A 11067251-AGAGG-A ***
13222908-AGG-GGA 11067232-AGG-GGA ***
13203968-GACCACCCCGCCTC-AATGACGGTAT 11048292-GACCACCCCGCCTC-AATGACGGTAT ***
9993354-GA-CG 10155745-GA-CG ***
7414277-CA-C 7546236-CA-C 27×A***
6808134-C-CA 6940093-C-CA 22×A***
5350037-C-TT 5481996-C-TT 21×T***
4739316-TA-T 4871275-TA-T ***
2845221-CA-C 2977180-CA-C 38×A***
2795559-G-GTTTTT 2927518-G-GTTTTT 24×T***
4118676-C-CA 4250635-C-CA 14×A***
22360091-CC-AT 20198205-CC-AT DYZ19 ***
22251480-AA-CC 20089594-AA-CC DYZ19 ***
13222956-AAGA-CAG 11067280-AAGA-CAG ***
23421043-A-AT 21259157-A-AT 22×T***
3474543-C-CA 3606502-C-CA 15×A***
13485262-TT-GG 11329586-TT-GG ***
4207957-CAA-C 4339916-CAA-C 22×A***
14938630-GA-G 12826705-G-. 19×A***
58912644-A-G 56678227-T-C ***
58911343-C-G 56679528-G-C ***
58906558-A-G 56684313-T-C ***
22344606-T-A 20182720-T-A DYZ19 ***
58890341-G-A 56700530-C-T ***
58885456-C-G 56705415-G-C ***
58884461-C-G 56706410-G-C ***
58877105-C-A 56713766-G-T ***
58877077-A-C 56713794-T-G ***
13222953-A-AG 11067277-A-AG ***
13222963-TGGGA-GGAGC 11067287-TGGGA-GGAGC ***
22267373-AAGT-CAGG 20105487-AAGT-CAGG DYZ19 ***
19948148-TC-T 17836268-TC-T P5_Prx ***
22265940-TGTTGTC-AGGCGTT 20104054-TGTTGTC-AGGCGTT DYZ19 ***
22265916-TACGG-GGTGT 20104030-TACGG-GGTGT DYZ19 ***
22265726-AT-CC 20103840-AT-CC DYZ19 ***
22265102-GT-TA 20103216-GT-TA DYZ19 ***
22265084-CCTTGTGATG-ACTTCAGATA 20103198-CCTTGTGATG-ACTTCAGATA DYZ19 ***
22252577-GGTC-TACG 20090691-GGTC-TACG DYZ19 ***
22249477-ATTTG-GTTT 20087591-ATTTG-GTTT DYZ19 ***
22234819-AGTA-TATG 20072933-AGTA-TATG DYZ19 ***
22232530-AGAAT-TGAAG 20070644-AGAAT-TGAAG DYZ19 ***
22226418-TATA-CATG 20064532-TATA-CATG DYZ19 ***
22226379-GA-AC 20064493-GA-AC DYZ19 ***
22224447-CA-TG 20062561-CA-TG DYZ19 ***
22166535-CT-C 20004649-CT-C 29×T***
19948153-CCCTCCCTCCCTCCCTCCCTCCCTCCCTC-TT 17836273-CCCTCCCTCCCTCCCTCCCTCCCTCCCTC-TT P5_Prx ***
19937302-GCT-CCC 17825422-GCT-CCC P5_Prx ***
13266042-CACA-TACG 11110366-CACA-TACG ***
19409391-C-CAAAAAAAAAAAA 17297511-C-CAAAAAAAAAAAA 22×A***
19206741-T-TAAAAA 17094861-T-TAAAAA 29×A***
13862357-CTTGA-ATGGT 11741651-CTTGA-ATGGT ***
13729144-GACTCGAT-TAAACAAA 11573468-GACTCGAT-TAAACAAA ***
13552155-AC-GCA 11396479-AC-GCA ***
13503528-T-TACACAC 11347852-T-TACACAC ***
13487849-GT-TC 11332173-GT-TC ***
13485345-G-GC 11329669-G-GC ***
13480224-CCCCTTGTAG-TCCCCTGCA 11324548-CCCCTTGTAG-TCCCCTGCA ***
13475764-CTGACG-ATGTCA 11320088-CTGACG-ATGTCA ***
13475595-GGTTG-TGTTA 11319919-GGTTG-TGTTA ***
13475526-AGTTC-GGTTG 11319850-AGTTC-GGTTG ***
13460335-CGTT-AGTC 11304659-CGTT-AGTC ***
13328747-GTTCT-CTTCC 11173071-GTTCT-CTTCC ***
22344683-G-C 20182797-G-C DYZ19 ***
22336090-G-C 20174204-G-C DYZ19 ***
22343140-G-T 20181254-G-T DYZ19 ***
8020527-TAAA-T 8152486-TAAA-T 20×A***
22355537-A-C 20193651-A-C DYZ19 ***
58837915-TCCATTTGATGCCATC-T 56752936-CATGGGATGGCATCAA-C ***
20063941-TAAAAA-T 17952061-TAAAAA-T P5_Gap 18×A***
6315240-C-T 6447199-C-T IR3_Dst ***
22499068-G-T 20337182-G-T DYZ19 ***
20522307-G-A 18360421-G-A P5_Dst ***
22420437-AGTA-GATG 20258551-AGTA-GATG DYZ19 ***
22265932-G-A 20104046-G-A DYZ19 ***
25606195-T-C 23460048-T-C P1_gr1 ***
24387472-T-C 22241325-T-C ***
13540253-A-C 11384577-A-C 23×AC***
13222963-T-G 11067287-T-G ***
3663358-T-C 3795317-T-C ***
22267354-TAGAATTTC-CAGATTTTT 20105468-TAGAATTTC-CAGATTTTT DYZ19 ***
13488969-GGCC-AGCG 11333293-GGCC-AGCG ***
13698600-A-G 11542924-A-G ***
13698592-T-G 11542916-T-G ***
13698590-A-G 11542914-A-G ***
13698580-C-A 11542904-C-A ***
22252650-C-A 20090764-C-A DYZ19 ***
13254415-CGG-TGGT 11098739-CGG-TGGT ***
22502335-C-T 20340449-C-T DYZ19 ***
22366024-G-A 20204138-G-A DYZ19 ***
26499808-C-T 24353661-C-T P1_Y1 ***
22251523-G-C 20089637-G-C DYZ19 ***
13701968-T-A 11546292-T-A ***
22232530-A-T 20070644-A-T DYZ19 ***
13398387-T-A 11242711-T-A ***
22355565-A-G 20193679-A-G DYZ19 ***
22355195-CAA-AAG 20193309-CAA-AAG DYZ19 ***
58840397-G-A 56750474-C-T ***
4080464-G-T 4212423-G-T ***
6789310-T-A 6921269-T-A ***
6321380-G-A 6453339-G-A IR3_Dst ***
6315273-A-G 6447232-A-G IR3_Dst ***
6315272-G-T 6447231-G-T IR3_Dst ***
6315268-C-A 6447227-C-A IR3_Dst ***
6315264-G-T 6447223-G-T IR3_Dst ***
6315260-C-A 6447219-C-A IR3_Dst ***
6315225-T-A 6447184-T-A IR3_Dst ***
5552994-T-A 5684953-T-A ***
5055738-G-C 5187697-G-C ***
4628210-T-G 4760169-T-G ***
4336301-G-C 4468260-G-C ***
4244303-C-T 4376262-C-T ***
3354817-G-T 3486776-G-T ***
22355574-CAGACC-AAGAAT 20193688-CAGACC-AAGAAT DYZ19 ***
13315796-T-G 11160120-T-G ***
27747656-T-A 25601509-T-A P1_Y2 ***
22273877-G-A 20111991-G-A DYZ19 ***
13475764-C-A 11320088-C-A ***
22360622-A-T 20198736-A-T DYZ19 ***
22344756-C-A 20182870-C-A DYZ19 ***
7120493-T-C 7252452-T-C ***
22481261-C-G 20319375-C-G DYZ19 ***
13203968-G-A 11048292-G-A ***
22251480-A-C 20089594-A-C DYZ19 ***
59008780-TTTA-T 56862633-TTTA-T ***
13222915-A-G 11067239-A-G ***
22343134-T-C 20181248-T-C DYZ19 ***
3923086-G-A 4055045-G-A ***
22337096-G-C 20175210-G-C DYZ19 ***
13203971-C-G 11048295-C-G ***
22343133-G-T 20181247-G-T DYZ19 ***
22308502-C-A 20146616-C-A DYZ19 ***
18437875-T-A 16325995-T-A P6_Dst ***
18437826-G-T 16325946-G-T P6_Dst ***
23084704-G-GT 20922818-G-GT 19×T***
13463948-TTCCCCC-CTCACCCAAAA 11308272-TTCCCCC-CTCACCCAAAA ***
13129690-TCAAATCTGTCAGT-AAAACTCTATGAGA 10619176-TCAAATCTGTCAGT-AAAACTCTATGAGA ***
13726428-T-A 11570752-T-A ***
21946463-GAA-G 19784577-GAA-G 15×A***
58840431-G-C 56750440-C-G ***
22362680-G-C 20200794-G-C DYZ19 ***
22289446-C-G 20127560-C-G DYZ19 ***
22266206-C-G 20104320-C-G DYZ19 ***
22480990-GTG-ATT 20319104-GTG-ATT DYZ19 ***
13721630-G-A 11565954-G-A ***
22257282-T-C 20095396-T-C DYZ19 ***
13721624-G-T 11565948-G-T ***
13721616-C-A 11565940-C-A 4×ATGGA***
27546140-TC-T 25399993-TC-T FGC389 P1_Y2 ***
13481362-CCGTG-AAGTT 11325686-CCGTG-AAGTT ***
21287967-CT-C 19126081-CT-C 16×T***
13465335-T-A 11309659-T-A ***
58903878-ATTCCTTTCCATTAAT-A 56686973-TGGAAATTAATGGAAA-T ***
22366697-T-C 20204811-T-C DYZ19 ***
10029513-A-G 10191904-A-G ***
22757065-A-T 20595179-A-T ***
13129698-G-A 10619184-G-A ***
13129691-C-A 10619177-C-A ***
13129690-T-A 10619176-T-A ***
22480925-ACTGG-TGTGA 20319039-ACTGG-TGTGA DYZ19 ***
22257285-G-T 20095399-G-T DYZ19 ***
13485263-T-G 11329587-T-G ***
20533423-G-T 18371537-G-T P5_Dst ***
24408991-ACC-A 22262844-ACC-A 14×C***
13245469-C-T 11089793-C-T ***
58982676-CTTCA-C 56836529-CTTCA-C ***
9939086-TC-GG 10101477-TC-GG ***
22480892-C-G 20319006-C-G DYZ19 ***
22342626-A-T 20180740-A-T DYZ19 ***
19178408-T-C 17066528-T-C ***
13729166-G-A 11573490-G-A ***
16138796-G-A 14026916-G-A P8_Dst ***
16138789-A-G 14026909-A-G P8_Dst ***
13140059-T-C 10629545-T-C ***
25444410-C-T 23298263-C-T P2_r2 32×T***
22234852-A-T 20072966-A-T DYZ19 ***
13701962-A-T 11546286-A-T ***
22297349-T-G 20135463-T-G DYZ19 ***
22421675-A-T 20259789-A-T DYZ19 ***
6231178-G-GA 6363137-G-GA IR3_Dst 12×A***
13479780-A-C 11324104-A-C ***
26499796-A-G 24353649-A-G P1_Y1 ***
26260489-A-C 24114342-A-C P1_Y1 ***
26260483-A-C 24114336-A-C P1_Y1 ***
18437858-C-T 16325978-C-T P6_Dst ***
13728164-T-C 11572488-T-C ***
28478008-A-T 26331861-A-T 15×AT***
13486155-A-G 11330479-A-G ***
13483828-G-A 11328152-G-A ***
20801667-T-C 18639781-T-C P4_Prx ***
9930280-T-G 10092671-T-G ***
22227892-AAC-CTA 20066006-AAC-CTA DYZ19 ***
13107610-A-T 10597096-A-T ***
13222908-A-G 11067232-A-G ***
22342629-T-C 20180743-T-C DYZ19 ***
22227893-A-T 20066007-A-T DYZ19 ***
22265774-A-G 20103888-A-G DYZ19 ***
22265731-G-T 20103845-G-T DYZ19 ***
22252649-C-A 20090763-C-A DYZ19 ***
22252645-T-C 20090759-T-C DYZ19 ***
22252600-C-A 20090714-C-A DYZ19 ***
22252560-A-G 20090674-A-G DYZ19 ***
22251541-C-G 20089655-C-G DYZ19 ***
22251531-C-A 20089645-C-A DYZ19 ***
22251445-A-G 20089559-A-G DYZ19 ***
22247618-G-T 20085732-G-T DYZ19 ***
22234794-A-C 20072908-A-C DYZ19 ***
22232534-T-G 20070648-T-G DYZ19 ***
22227894-C-A 20066008-C-A DYZ19 ***
22226574-G-T 20064688-G-T DYZ19 ***
22273865-A-T 20111979-A-T DYZ19 ***
22226387-T-C 20064501-T-C DYZ19 ***
22224448-A-G 20062562-A-G DYZ19 ***
20801646-T-C 18639760-T-C P4_Prx ***
20675542-T-C 18513656-T-C P4_Prx ***
20675540-T-A 18513654-T-A P4_Prx ***
20675510-T-A 18513624-T-A P4_Prx ***
20522275-G-T 18360389-G-T P5_Dst ***
20522240-A-G 18360354-A-G P5_Dst ***
20522238-A-T 18360352-A-T P5_Dst ***
20501665-T-A 18339779-T-A P5_Dst ***
20409374-G-T 18247488-G-T P5_Dst ***
20409364-A-G 18247478-A-G P5_Dst ***
19844014-T-A 17732134-T-A P5_Prx ***
22273863-A-C 20111977-A-C DYZ19 ***
22273866-T-C 20111980-T-C DYZ19 ***
19844001-A-G 17732121-A-G P5_Prx ***
22328179-G-A 20166293-G-A DYZ19 ***
22342618-G-T 20180732-G-T DYZ19 ***
22342588-T-C 20180702-T-C DYZ19 ***
22338653-A-T 20176767-A-T DYZ19 ***
22338601-T-C 20176715-T-C DYZ19 ***
22338594-C-T 20176708-C-T DYZ19 ***
22338548-C-T 20176662-C-T DYZ19 ***
22338541-A-T 20176655-A-T DYZ19 ***
22338534-G-C 20176648-G-C DYZ19 ***
22337579-C-T 20175693-C-T DYZ19 ***
22336106-C-G 20174220-C-G DYZ19 ***
26902327-G-A 24756180-G-A P1_r3 ***
22335623-A-G 20173737-A-G DYZ19 ***
22335607-T-A 20173721-T-A DYZ19 ***
22328174-T-G 20166288-T-G DYZ19 ***
22273868-T-G 20111982-T-G DYZ19 ***
22328169-A-G 20166283-A-G DYZ19 ***
22328163-A-G 20166277-A-G DYZ19 ***
22322076-G-C 20160190-G-C DYZ19 ***
22322069-T-C 20160183-T-C DYZ19 ***
22322060-G-T 20160174-G-T DYZ19 ***
22322025-C-T 20160139-C-T DYZ19 ***
22322016-T-A 20160130-T-A DYZ19 ***
22313095-C-T 20151209-C-T DYZ19 ***
22313089-T-A 20151203-T-A DYZ19 ***
22313084-T-G 20151198-T-G DYZ19 ***
22309511-T-C 20147625-T-C DYZ19 ***
22306441-G-A 20144555-G-A DYZ19 ***
22283428-A-T 20121542-A-T DYZ19 ***
22276693-A-T 20114807-A-T DYZ19 ***
19844012-G-A 17732132-G-A P5_Prx ***
19754029-T-C 17642149-T-C P5_Prx ***
13222910-G-A 11067234-G-A ***
13475746-A-C 11320070-A-C ***
13729164-G-C 11573488-G-C ***
13729138-G-A 11573462-G-A ***
13721945-C-G 11566269-C-G ***
13710818-C-A 11555142-C-A ***
13710806-A-G 11555130-A-G ***
13701643-C-G 11545967-C-G ***
13698607-T-G 11542931-T-G ***
13698582-T-G 11542906-T-G ***
13698576-T-A 11542900-T-A ***
13549103-C-A 11393427-C-A ***
13487737-C-T 11332061-C-T ***
13478399-T-A 11322723-T-A ***
13475754-G-C 11320078-G-C ***
13398337-C-T 11242661-C-T ***
15246295-C-T 13134381-C-T ***
13379446-T-C 11223770-T-C ***
13378250-G-A 11222574-G-A ***
13326816-A-G 11171140-A-G ***
13315930-C-T 11160254-C-T ***
13314545-C-T 11158869-C-T ***
13311089-G-C 11155413-G-C ***
13311082-C-G 11155406-C-G ***
13289268-G-C 11133592-G-C ***
13245491-G-A 11089815-G-A ***
13223544-G-A 11067868-G-A ***
13223538-A-T 11067862-A-T ***
13222965-G-A 11067289-G-A ***
13222956-A-C 11067280-A-C ***
13748487-G-A 11592811-G-A ***
16498355-C-T 14386475-C-T ***
19639999-C-A 17528119-C-A P5_Prx ***
18437929-G-A 16326049-G-A P6_Dst ***
19639996-T-C 17528116-T-C P5_Prx ***
19639993-A-T 17528113-A-T P5_Prx ***
19639990-G-C 17528110-G-C P5_Prx ***
19639987-A-G 17528107-A-G P5_Prx ***
19639986-C-T 17528106-C-T P5_Prx ***
19639983-G-T 17528103-G-T P5_Prx ***
19639980-T-A 17528100-T-A P5_Prx ***
19639973-T-A 17528093-T-A P5_Prx ***
19632521-G-A 17520641-G-A P5_Prx ***
19632519-G-A 17520639-G-A P5_Prx ***
19632477-T-C 17520597-T-C P5_Prx ***
19632447-C-A 17520567-C-A P5_Prx ***
18437930-G-A 16326050-G-A P6_Dst ***
18437909-A-C 16326029-A-C P6_Dst ***
18432922-T-C 16321042-T-C P6_Dst ***
18437906-A-G 16326026-A-G P6_Dst ***
18437879-G-C 16325999-G-C P6_Dst ***
18437866-A-G 16325986-A-G P6_Dst ***
18437859-C-G 16325979-C-G P6_Dst ***
18433047-G-T 16321167-G-T P6_Dst ***
18433039-A-G 16321159-A-G P6_Dst ***
18433031-T-A 16321151-T-A P6_Dst ***
18433030-T-A 16321150-T-A P6_Dst ***
18433016-C-A 16321136-C-A P6_Dst ***
18432993-A-T 16321113-A-T P6_Dst ***
18432990-A-C 16321110-A-C P6_Dst ***
18432989-G-T 16321109-G-T P6_Dst ***
18432988-A-T 16321108-A-T P6_Dst ***
18432967-G-A 16321087-G-A P6_Dst ***
58880708-CCATTTGATGCCATTA-C 56710134-GATGGCATCAAATGTA-G ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Haplotype Progression

The data below reveals the progression of changes in the haplotype. The bottom row is the haplotype for this man and above him are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are very much a work in progress, and any suggested modifications are appreciated. I think we can use our vast collection of haplotype data to refine these haplotypes. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

DYS393
DYS390
DYS19
DYS391
DYS385
DYS426
DYS388
DYS439
DYS389i
DYS392
DYS389ii
DYS458
DYS459
DYS455
DYS454
DYS447
DYS437
DYS448
DYS449
DYS464
DYS460
Y-GATA-H4
YCAII
DYS456
DYS607
DYS576
DYS570
CDY
DYS442
DYS438
DYS531
DYS578
DYF395S1
DYS590
DYS537
DYS641
DYS472
DYF406S1
DYS511
DYS425
DYS413
DYS557
DYS594
DYS436
DYS490
DYS534
DYS450
DYS444
DYS481
DYS520
DYS446
DYS617
DYS568
DYS487
DYS572
DYS640
DYS492
DYS565
DYS710
DYS485
DYS632
DYS495
DYS540
DYS714
DYS716
DYS717
DYS505
DYS556
DYS549
DYS589
DYS522
DYS494
DYS533
DYS636
DYS575
DYS638
DYS462
DYS452
DYS445
Y-GATA-A10
DYS463
DYS441
Y-GGAAT-1B07
DYS525
DYS712
DYS593
DYS650
DYS532
DYS715
DYS504
DYS513
DYS561
DYS552
DYS726
DYS635
DYS587
DYS643
DYS497
DYS510
DYS434
DYS461
DYS435
P312/S1161324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123315916122626191211131210912121011113012132413101020151913241712152412231810141791211
Wheaton1424161112-14121212131329169-1011112615192815-15-17-18111019-231514181835-37121311915-1681010810101223-231610121216813222012121113111112113514916122626191211121210913121011113012132313101021151913221712162512231810141991211

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 7Z8F5*16000000100000008300000
Used in age calculations16000000100000008300000
Counts of SNPs92
Variant counts last updated 2017-11-05 23:09:00.

* BED data not available. Using default values.


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