Tree Position

R-P312/S116 > Z40481 > ZZ11 > U152/S28 > L2/S139 > ZZ48 > ZZ56 > FGC10543 > FGC10530 > PR5365

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
22S11
2743088-T-A 2875047-T-A FGC10504 YY+
2912440-A-T 3044399-A-T FGC10505 YY+
3323714-C-T 3455673-C-T FGC10506 +
3609828-A-G 3741787-A-G FGC10507 +
3653130-T-G 3785089-T-G FGC10508 +
4368364-C-T 4500323-C-T FGC10509 +
4998443-T-C 5130402-T-C FGC10511 +
6188812-G-A 6320771-G-A FGC10515 IR3_Dst +
7149089-A-G 7281048-A-G FGC10516 Y+
8303176-G-A 8435135-G-A FGC10517 YY+
8534545-C-T 8666504-C-T FGC10518 YY+
8645562-A-G 8777521-A-G FGC10519 YY+
8812836-G-A 8944795-G-A FGC10520 Y+
8892987-A-T 9024946-A-T FGC10521 Y+
9806714-A-G 9969105-A-G FGC10522 YY+
9949071-C-G 10111462-C-G FGC10523 Y+
14074184-A-C 11953478-A-C FGC10524 YY+
14307990-A-T 12187284-A-T FGC10525 YY+
15209814-A-G 13097900-A-G FGC10527 YY+
15251356-A-G 13139442-A-G FGC10528 Y+
16475065-G-C 14363185-G-C FGC10531 YY+
16593622-T-G 14481742-T-G FGC10532 YY+
16786077-G-A 14674197-G-A FGC10533 YY+
16926410-C-A 14814530-C-A FGC10534 Y+
17188974-C-T 15077094-C-T FGC10535 YY+
17372204-C-T 15260324-C-T FGC10536 YY+
17391967-C-T 15280087-C-T FGC10537 YY+
17757782-T-C 15645902-T-C FGC10538 YY+
17996800-G-A 15884920-G-A FGC10539 P7_Gap Y+
18568413-G-C 16456533-G-C FGC10540 YY+
19077641-G-T 16965761-G-T FGC10542 YY+
21423312-T-C 19261426-T-C FGC10546 YY+
21756428-T-C 19594542-T-C FGC10547 YY+
21819512-C-T 19657626-C-T FGC10548 Y+
22233554-G-T 20071668-G-T FGC10549 DYZ19 +
23858817-C-T 21696931-C-T FGC10553 Y+
24464849-T-C 22318702-T-C FGC10555 Y+
3909602-AATT-A 4041561-AATT-A +
22977356-G-A 20815470-G-A FGC10551 YY*
2649737-C-A 2781696-C-A FGC10503 Y*
4841511-T-G 4973470-T-G FGC10510 *
5209993-G-A 5341952-G-A FGC10512 *
5675821-G-A 5807780-G-A FGC10513 *
5757139-G-A 5889098-G-A FGC10514 *
15197566-G-A 13085652-G-A FGC10526 YY*
15295168-T-C 13183267-T-C FGC10529 Y*
18885060-G-A 16773180-G-A FGC10541 YY*
19244794-A-G 17132914-A-G FGC10544 YY*
19448331-C-A 17336451-C-A FGC10545 YY*
22691872-C-T 20529986-C-T FGC10550 Y*
23709674-T-C 21547788-T-C FGC10552 *
24422558-C-A 22276411-C-A FGC10554 Y*
5673879-T-TG 5805838-T-TG *
6892709-AT-A 7024668-AT-A *
15687824-G-GA 13575944-G-GA *
22229715-G-A 20067829-G-A DYZ19 **
22229716-T-C 20067830-T-C DYZ19 **
22229717-A-T 20067831-A-T DYZ19 **
20326007-C-CTTTTTTTT 18164121-C-CTTTTTTTT P5_Dst 29×T**
25709386-G-GTTTTTTT 23563239-G-GTTTTTTT P1_b3 31×T**
22227967-G-A 20066081-G-A DYZ19 **
13487672-A-AAAACGCGCCGCCC 11331996-A-AAAACGCGCCGCCC **
22229755-A-G 20067869-A-G FT453300 DYZ19 **
14063145-CAGATAGAT-C 11942439-CAGATAGAT-C 13×AGAT**
22419741-A-T 20257855-A-T DYZ19 **
5886050-T-A 6018009-T-A Z8453 **
9380712-T-A 9543103-T-A FTB50628 **
9380715-C-G 9543106-C-G FTB50629 **
9380711-T-C 9543102-T-C FTB50627 **
22419690-G-T 20257804-G-T DYZ19 **
3112150-T-C 3244109-T-C FTB49875 **
9938712-C-T 10101103-C-T FGC77754 **
13859764-C-G 11739058-C-G FGC77756 **
17164162-T-C 15052282-T-C FGC77757 **
18401139-C-T 16289259-C-T FT161013 P6_Gap **
19086493-T-C 16974613-T-C FTB40562 **
19086494-C-A 16974614-C-A FTB40563 **
22237483-C-T 20075597-C-T DYZ19 **
22430259-G-A 20268373-G-A DYZ19 **
6803096-G-GT 6935055-G-GT **
8751076-G-GTATA 8883035-G-GTATA 10×TA**
9465060-C-CT 9627451-C-CT 9×T**
16296452-A-AT 14184572-A-AT 9×T**
19547453-C-CAAAAA 17435573-C-CAAAAA 24×A**
22739716-C-CAAA 20577830-C-CAAA 24×A**
58883026-G-T 56707845-C-A ***
22503694-G-A 20341808-G-A FGC83097 DYZ19 ***
22360334-C-A 20198448-C-A DYZ19 ***
58913109-C-A 56677762-G-T ***
13129672-T-C 10619158-T-C ***
13129674-T-C 10619160-T-C ***
13730234-C-G 11574558-C-G ***
22232108-G-A 20070222-G-A DYZ19 ***
22236408-A-G 20074522-A-G DYZ19 ***
22236745-T-C 20074859-T-C DYZ19 ***
22256885-G-C 20094999-G-C DYZ19 ***
22256886-A-C 20095000-A-C DYZ19 ***
22289799-C-A 20127913-C-A DYZ19 ***
22352434-G-T 20190548-G-T DYZ19 ***
22352436-C-T 20190550-C-T DYZ19 ***
22352457-G-A 20190571-G-A DYZ19 ***
22352459-G-T 20190573-G-T DYZ19 ***
22360135-T-G 20198249-T-G DYZ19 ***
22503697-T-G 20341811-T-G DYZ19 ***
22504424-G-C 20342538-G-C DYZ19 ***
58843776-G-A 56747095-C-T ***
58861691-C-G 56729180-G-C ***
13386059-GAAA-G 11230383-GAAA-G 10×A***
13482911-ATTC-GTTA 11327235-ATTC-GTTA ***
22341240-TAGAGTTTGT-CATTGTGTCC 20179354-TAGAGTTTGT-CATTGTGTCC DYZ19 ***
22352457-GGG-ATT 20190571-GGG-ATT DYZ19 ***
22435744-TGA-AGC 20273858-TGA-AGC DYZ19 ***
22496054-AGTGT-TGTGA 20334168-AGTGT-TGTGA DYZ19 ***
13129615-C-T 10619101-C-T ***
13129616-T-G 10619102-T-G ***
13129622-C-G 10619108-C-G ***
13129623-A-G 10619109-A-G ***
13734116-G-A 11578440-G-A ***
22251635-T-G 20089749-T-G DYZ19 ***
22337291-C-A 20175405-C-A DYZ19 ***
22337292-C-G 20175406-C-G DYZ19 ***
22337295-A-T 20175409-A-T DYZ19 ***
22491429-G-C 20329543-G-C DYZ19 ***
22495793-C-A 20333907-C-A DYZ19 ***
22496139-C-G 20334253-C-G DYZ19 ***
58872956-C-T 56717915-G-A ***
58872962-A-C 56717909-T-G ***
58846437-TTCCATTCAAA-T 56744416-GGAATGGATTT-G ***
13129527-G-A 10619013-G-A ***
13222389-G-A 11066713-G-A A3340 ***
13842510-T-A 11721804-T-A ***
22232111-C-G 20070225-C-G DYZ19 ***
22250487-G-C 20088601-G-C DYZ19 ***
22263770-G-A 20101884-G-A DYZ19 ***
22357251-C-G 20195365-C-G DYZ19 ***
58843212-G-C 56747659-C-G ***
22263752-CAATACA-TACTTCC 20101866-CAATACA-TACTTCC DYZ19 ***
13440731-A-C 11285055-A-C ***
22309360-T-G 20147474-T-G DYZ19 ***
22344795-G-A 20182909-G-A DYZ19 ***
13222867-G-A 11067191-G-A ***
22236723-G-T 20074837-G-T Z3461 DYZ19 ***
22309337-G-T 20147451-G-T DYZ19 ***
22309366-C-T 20147480-C-T DYZ19 ***
22344810-G-T 20182924-G-T DYZ19 ***
22352888-A-T 20191002-A-T DYZ19 ***
22357354-A-G 20195468-A-G DYZ19 ***
22364734-G-C 20202848-G-C DYZ19 ***
22366791-C-T 20204905-C-T DYZ19 ***
26508288-C-G 24362141-C-G P1_Y1 ***
58910311-G-T 56680560-C-A ***
58844025-CA-C 56746844-AT-A ***
13463838-TTT-GGC 11308162-TTT-GGC ***
22309319-C-G 20147433-C-G DYZ19 ***
13475703-G-A 11320027-G-A ***
20574016-C-A 18412130-C-A P5_Dst ***
22244984-T-G 20083098-T-G DYZ19 ***
22309318-G-C 20147432-G-C DYZ19 ***
22357694-C-A 20195808-C-A DYZ19 ***
22366433-G-C 20204547-G-C DYZ19 ***
22366438-G-T 20204552-G-T DYZ19 ***
22366578-G-T 20204692-G-T DYZ19 ***
22367160-G-T 20205274-G-T DYZ19 ***
22309290-CT-C 20147404-CT-C DYZ19 ***
22309295-C-CT 20147409-C-CT DYZ19 ***
22309318-GC-CG 20147432-GC-CG DYZ19 ***
19469890-G-C 17358010-G-C ***
22366584-G-A 20204698-G-A DYZ19 ***
13292164-CA-G 11136488-CA-G ***
13482939-T-A 11327263-T-A ***
20574069-G-T 18412183-G-T P5_Dst ***
20574072-C-T 18412186-C-T P5_Dst ***
20574077-G-A 18412191-G-A P5_Dst ***
22309523-A-C 20147637-A-C DYZ19 ***
22435814-C-G 20273928-C-G DYZ19 ***
58851970-A-G 56738901-T-C ***
13482952-TC-G 11327276-TC-G ***
22337322-T-G 20175436-T-G DYZ19 ***
22360154-G-T 20198268-G-T DYZ19 ***
20574057-A-G 18412171-A-G P5_Dst ***
22364523-T-A 20202637-T-A DYZ19 ***
22364560-C-G 20202674-C-G DYZ19 ***
22421286-G-T 20259400-G-T DYZ19 ***
22421287-A-T 20259401-A-T DYZ19 ***
58870180-TG-AT 56720690-CA-AT ***
15491908-G-T 13380028-G-T ***
58843700-C-G 56747171-G-C ***
13483583-TA-GC 11327907-TA-GC ***
13462155-AGCC-GGCT 11306479-AGCC-GGCT ***
27651806-GAAAG-AAAAA 25505659-GAAAG-AAAAA P1_Y2 ***
22341143-G-T 20179257-G-T DYZ19 ***
58830798-T-C 56760073-A-G ***
58851915-T-C 56738956-A-G ***
58910250-A-T 56680621-T-A ***
10019077-AAT-GAC 10181468-AAT-GAC ***
58831538-TTTCC-ATTCA 56759329-GGAAA-TGAAT ***
58917663-N-C 56673208-N-G ***
58916643-G-A 56674228-C-T ***
20242479-T-G 18080593-T-G P5_Dst 12×G***
26499952-A-G 24353805-A-G P1_Y1 20×T***
58917661-N-A 56673210-N-T ***
58917662-N-T 56673209-N-A ***
9320569-ACACACACACACA-T 9482960-ACACACACACACA-T ***
9432005-GAATCCT-CCAGCATCATAA 9594396-GAATCCT-CCAGCATCATAA ***
28478036-TAT-GAG 26331889-TAT-GAG ***
9950612-G-T 10113003-G-T ***
58917664-N-G 56673207-N-C ***
22337346-T-A 20175460-T-A DYZ19 ***
22481762-G-C 20319876-G-C DYZ19 ***
13445362-CAAAAAAA-C 11289686-CAAAAAAA-C 15×A***
22226532-CAAA-AAAT 20064646-CAAA-AAAT DYZ19 ***
24388090-A-ATC 22241943-A-ATC ***
22234939-C-A 20073053-C-A DYZ19 ***
22293088-T-G 20131202-T-G DYZ19 ***
58882545-T-G 56708326-A-C ***
28804549-A-G 26658402-A-G ***
22282019-G-A 20120133-G-A DYZ19 ***
22421536-C-T 20259650-C-T DYZ19 ***
22421538-G-A 20259652-G-A DYZ19 ***
58882027-G-C 56708844-C-G ***
58882046-CTCC-TTCA 56708822-GGAG-TGAA ***
3902534-A-T 4034493-A-T ***
3167207-C-A 3299166-C-A ***
22337305-G-T 20175419-G-T DYZ19 ***
22421313-T-A 20259427-T-A DYZ19 ***
58917660-N-G 56673211-N-C ***
58840442-CTTCCA-GTTGCATTTT 56750424-TGGAAG-AAAATGCAAC ***
58848553-GTCATT-G 56742312-GAATGA-G ***
58917656-CNN-C ***
13733946-G-A 11578270-G-A ***
13143807-CTCCATTCCAT-C 10633293-CTCCATTCCAT-C 10×TCCAT***
22352591-T-C 20190705-T-C S3090 DYZ19 ***
22502688-G-A 20340802-G-A DYZ19 ***
22502691-C-G 20340805-C-G DYZ19 ***
58843217-T-A 56747654-A-T ***
17463321-T-TTATA 15351441-T-TTATA 14×TA***
58879732-T-A 56711139-A-T ***
28761382-C-CAAA 26615235-C-CAAA 31×A***
22273691-C-T 20111805-C-T DYZ19 ***
13616457-G-T 11460781-G-T ***
22293093-G-A 20131207-G-A DYZ19 ***
22365618-GC-TG 20203732-GC-TG DYZ19 ***
58917665-N-G 56673206-N-C ***
22419797-A-G 20257911-A-G FGC13014FGC13043 DYZ19 ***
58835705-CTCC-TTCA 56755163-GGAG-TGAA ***
22293035-T-C 20131149-T-C DYZ19 ***
58838389-A-C 56752482-T-G ***
27575934-CTTTTTT-C 25429787-CTTTTTT-C P1_Y2 19×T***
13223034-T-G 11067358-T-G ***
22247198-A-G 20085312-A-G DYZ19 ***
22247202-T-C 20085316-T-C DYZ19 ***
22419782-T-C 20257896-T-C DYZ19 ***
22247236-A-G 20085350-A-G DYZ19 ***
22419820-C-T 20257934-C-T DYZ19 ***
22419831-A-T 20257945-A-T DYZ19 ***
58910260-T-G 56680611-A-C ***
13480641-TGC-AGG 11324965-TGC-AGG ***
22299808-TAA-GAG 20137922-TAA-GAG DYZ19 ***
9944214-ACATC-GCATT 10106605-ACATC-GCATT ***
13483708-CA-C 11328032-CA-C ***
22247198-ACTGT-GCTGC 20085312-ACTGT-GCTGC DYZ19 ***
22299818-CCAGTCCGTTACGGTG-GCAGACCTTTAAGGTA 20137932-CCAGTCCGTTACGGTG-GCAGACCTTTAAGGTA DYZ19 ***
22419782-TTCACT-CTGACC 20257896-TTCACT-CTGACC DYZ19 ***
22420108-ATTCG-CTTCA 20258222-ATTCG-CTTCA DYZ19 ***
22332804-C-A 20170918-C-A DYZ19 ***
58825356-G-A 56765515-C-T ***
22495902-A-G 20334016-A-G DYZ19 ***
13487635-TGCT-CGCG 11331959-TGCT-CGCG ***
22495925-AGTGAGTGT-GGTGTGTGA 20334039-AGTGAGTGT-GGTGTGTGA DYZ19 ***
20574008-G-A 18412122-G-A P5_Dst ***
20574092-A-C 18412206-A-C P5_Dst ***
20574093-G-T 18412207-G-T P5_Dst ***
22367045-T-G 20205159-T-G DYZ19 ***
58842347-T-A 56748524-A-T ***
58842356-T-A 56748515-A-T ***
58842357-T-A 56748514-A-T ***
58842358-T-G 56748513-A-C ***
20574118-T-C 18412232-T-C P5_Dst ***
28336668-C-CAAAA 26190521-C-CAAAA P1_b4 31×A***
22282008-T-A 20120122-T-A DYZ19 ***
22282012-T-A 20120126-T-A DYZ19 ***
58854265-T-A 56736606-A-T ***
58912505-C-T 56678366-G-A ***
58912510-C-T 56678361-G-A ***
22281902-ATTTCCTTTCT-TGTTTCTTCAA 20120016-ATTTCCTTTCT-TGTTTCTTCAA DYZ19 ***
10013077-AGC-GGT 10175468-AGC-GGT ***
58854260-T-G 56736611-A-C ***
13199164-C-CAAAAAA 11043488-C-CAAAAAA 18×A***
22365980-GG-TA 20204094-GG-TA DYZ19 ***
16074806-A-T 13962926-A-T ***
16074807-C-T 13962927-C-T ***
22344838-A-T 20182952-A-T DYZ19 ***
22344851-C-T 20182965-C-T DYZ19 ***
13483502-C-CA 11327826-C-CA ***
13483505-CT-AG 11327829-CT-AG ***
27651806-G-A 25505659-G-A P1_Y2 ***
58916628-C-A 56674243-G-T ***
58916638-A-T 56674233-T-A ***
4098639-CA-C 4230598-CA-C 20×A***
3706709-C-G 3838668-C-G ***
6765637-TC-T 6897596-TC-T ***
13222827-A-G 11067151-A-G ***
13387180-G-A 11231504-G-A ***
13482640-C-A 11326964-C-A ***
22014410-C-T 19852524-C-T ***
22252172-T-A 20090286-T-A DYZ19 ***
22425479-G-A 20263593-G-A DYZ19 ***
23518998-C-A 21357112-C-A ***
23520037-G-C 21358151-G-C ***
24491355-T-C 22345208-T-C ***
28610464-C-T 26464317-C-T ***
13704721-C-A 11549045-C-A ***
58820493-A-T 56770378-T-A ***
13487612-AT-CC 11331936-AT-CC ***
22421464-C-T 20259578-C-T DYZ19 ***
13725226-G-A 11569550-G-A ***
58910240-T-TC 56680630-A-AG ***
22342618-G-A 20180732-G-A DYZ19 ***
22337320-T-G 20175434-T-G DYZ19 ***
58843762-T-A 56747109-A-T ***
58843759-CCATTA-ACAATC 56747107-TAATGG-GATTGT ***
22341803-T-A 20179917-T-A DYZ19 ***
22341804-A-G 20179918-A-G DYZ19 ***
22341805-C-T 20179919-C-T DYZ19 ***
13389651-GTA-G 11233975-GTA-G 8×TA***
23519008-C-G 21357122-C-G ***
26010344-T-G 23864197-T-G P1_Y1 ***
10028266-G-C 10190657-G-C ***
13740771-T-A 11585095-T-A ***
22337314-G-T 20175428-G-T DYZ19 ***
22309553-T-G 20147667-T-G DYZ19 ***
17994805-G-A 15882925-G-A P7_Prx ***
28086215-ACCCA-CCCCC 25940068-ACCCA-CCCCC P1_Y2 ***
22293338-TAAATT-GAAAGA 20131452-TAAATT-GAAAGA DYZ19 ***
58849022-G-C 56741849-C-G ***
13475526-AGTTC-GGTTA 11319850-AGTTC-GGTTA ***
58823078-T-A 56767793-A-T ***
22229746-G-GC 20067860-G-GC DYZ19 ***
13485203-C-T 11329527-C-T ***
21084437-A-T 18922551-A-T F23868 12×T***
13483560-A-G 11327884-A-G ***
22282129-T-C 20120243-T-C DYZ19 ***
13485169-T-C 11329493-T-C ***
22342609-C-A 20180723-C-A DYZ19 ***
13485174-T-A 11329498-T-A ***
13485166-G-T 11329490-G-T ***
22342627-G-T 20180741-G-T DYZ19 ***
22342628-T-A 20180742-T-A DYZ19 ***
15248059-C-T 13136145-C-T ***
58848790-A-T 56742081-T-A ***
13464268-A-G 11308592-A-G ***
13487613-T-C 11331937-T-C ***
22252180-G-A 20090294-G-A DYZ19 ***
22353013-G-T 20191127-G-T DYZ19 ***
3952718-A-T 4084677-A-T ***
4063686-C-T 4195645-C-T ***
6165709-G-A 6297668-G-A IR3_Dst ***
6165714-C-A 6297673-C-A IR3_Dst ***
6165718-T-A 6297677-T-A IR3_Dst ***
6380401-G-A 6512360-G-A ***
6380402-C-A 6512361-C-A ***
6380407-A-T 6512366-A-T ***
6380440-G-T 6512399-G-T ***
6724675-A-T 6856634-A-T ***
8065741-C-T 8197700-C-T ***
8353311-G-T 8485270-G-T ***
9302453-G-A 9464844-G-A ***
9342984-G-A 9505375-G-A ***
9702657-G-A 9865048-G-A IR3_Prx ***
9702661-A-T 9865052-A-T IR3_Prx ***
9722742-T-A 9885133-T-A IR3_Prx ***
9802904-G-T 9965295-G-T ***
10025440-A-G 10187831-A-G ***
10092021-C-T 10254412-C-T ***
10092415-G-T 10254806-G-T ***
10092458-A-G 10254849-A-G ***
10092467-A-T 10254858-A-T ***
10092479-G-A 10254870-G-A ***
10092484-G-A 10254875-G-A ***
10092491-G-A 10254882-G-A ***
10092494-A-G 10254885-A-G ***
10092497-T-G 10254888-T-G ***
10092501-G-A 10254892-G-A ***
13222820-G-A 11067144-G-A ***
13222839-G-A 11067163-G-A ***
13222860-G-T 11067184-G-T ***
13223600-G-A 11067924-G-A FT92628 ***
13334822-G-A 11179146-G-A ***
13334838-C-T 11179162-C-T ***
13351809-T-A 11196133-T-A ***
13470330-T-C 11314654-T-C ***
13470758-G-T 11315082-G-T ***
13470764-C-G 11315088-C-G ***
13482773-G-A 11327097-G-A ***
13483086-A-C 11327410-A-C ***
13483089-C-T 11327413-C-T FGC46958FGC46952 ***
13483536-G-C 11327860-G-C ***
13483551-C-G 11327875-C-G ***
13483556-T-A 11327880-T-A ***
13483557-T-G 11327881-T-G ***
13483558-A-C 11327882-A-C ***
13483987-C-T 11328311-C-T A20600 ***
13487740-C-A 11332064-C-A ***
13725205-C-T 11569529-C-T ***
13725211-G-A 11569535-G-A ***
13728263-T-A 11572587-T-A ***
13979495-T-C 11858789-T-C ***
14111046-A-G 11990340-A-G ***
14473246-G-A 12352515-G-A ***
14491221-G-C ***
15248045-G-A 13136131-G-A ***
15639686-G-A 13527806-G-A ***
17225316-T-C 15113436-T-C ***
17994803-G-A 15882923-G-A P7_Prx ***
18504739-T-A 16392859-T-A P6_Dst ***
18990904-A-G 16879024-A-G ***
19542055-A-G 17430175-A-G ***
19625982-C-T 17514102-C-T P5_Prx ***
19625986-C-T 17514106-C-T P5_Prx ***
19625993-T-C 17514113-T-C P5_Prx ***
19626006-T-C 17514126-T-C P5_Prx ***
19626016-A-G 17514136-A-G P5_Prx ***
19626020-T-A 17514140-T-A P5_Prx ***
19626089-C-G 17514209-C-G P5_Prx ***
19626093-G-A 17514213-G-A P5_Prx ***
19626124-G-A 17514244-G-A P5_Prx ***
19626127-G-C 17514247-G-C P5_Prx ***
19626138-G-A 17514258-G-A P5_Prx ***
19626153-C-T 17514273-C-T P5_Prx ***
19671224-C-A 17559344-C-A P5_Prx ***
19813143-A-G 17701263-A-G P5_Prx ***
20021848-C-A 17909968-C-A P5_Prx ***
20021867-T-A 17909987-T-A P5_Prx ***
20021885-T-A 17910005-T-A P5_Prx ***
20021890-A-T 17910010-A-T P5_Prx ***
20574143-G-A 18412257-G-A P5_Dst ***
20594269-T-A 18432383-T-A P5_Dst ***
20594290-T-A 18432404-T-A P5_Dst ***
20686687-T-A 18524801-T-A P4_Prx ***
20686688-T-A 18524802-T-A P4_Prx ***
20686694-C-G 18524808-C-G P4_Prx ***
20950929-A-T 18789043-A-T P4_Dst ***
20950930-G-T 18789044-G-T P4_Dst ***
20950943-C-T 18789057-C-T P4_Dst ***
20950945-G-T 18789059-G-T P4_Dst ***
20950954-T-G 18789068-T-G P4_Dst ***
20950959-C-T 18789073-C-T P4_Dst ***
20950960-C-T 18789074-C-T P4_Dst ***
21198752-C-T 19036866-C-T ***
21376388-C-T 19214502-C-T ***
22232057-A-T 20070171-A-T DYZ19 ***
22232074-C-G 20070188-C-G DYZ19 ***
22247527-T-G 20085641-T-G DYZ19 ***
22251756-T-C 20089870-T-C DYZ19 ***
22251795-C-G 20089909-C-G DYZ19 ***
22251824-G-A 20089938-G-A DYZ19 ***
22252122-A-T 20090236-A-T DYZ19 ***
22252129-G-A 20090243-G-A DYZ19 ***
22252134-T-C 20090248-T-C DYZ19 ***
22263752-C-T 20101866-C-T DYZ19 ***
22263758-A-C 20101872-A-C DYZ19 ***
22309568-G-C 20147682-G-C DYZ19 ***
22309587-G-T 20147701-G-T DYZ19 ***
22309604-C-T 20147718-C-T DYZ19 ***
22309610-T-G 20147724-T-G DYZ19 ***
22309616-C-T 20147730-C-T DYZ19 ***
22309623-C-A 20147737-C-A DYZ19 ***
22332807-G-A 20170921-G-A DYZ19 ***
22337348-A-T 20175462-A-T DYZ19 ***
22337355-C-A 20175469-C-A DYZ19 ***
22338348-T-C 20176462-T-C DYZ19 ***
22338349-T-A 20176463-T-A DYZ19 ***
22338357-G-C 20176471-G-C DYZ19 ***
22344828-T-A 20182942-T-A DYZ19 ***
22344831-T-G 20182945-T-G DYZ19 ***
22360158-T-G 20198272-T-G DYZ19 ***
22360307-T-A 20198421-T-A DYZ19 ***
22419784-C-G 20257898-C-G FGC57165 DYZ19 ***
22496287-T-A 20334401-T-A DYZ19 ***
22636975-G-A 20475089-G-A ***
24921451-G-A 22775304-G-A g1 ***
24921539-T-C 22775392-T-C g1 ***
25528767-G-A 23382620-G-A P1_gr1 ***
25802701-A-T 23656554-A-T P1_b3 ***
26010256-A-G 23864109-A-G P1_Y1 ***
26010258-A-G 23864111-A-G P1_Y1 ***
26048155-G-A 23902008-G-A P1_Y1 ***
26247769-C-T 24101622-C-T P1_Y1 ***
27173698-G-T 25027551-G-T P1_g3 ***
27173702-T-A 25027555-T-A P1_g3 ***
27173710-G-A 25027563-G-A P1_g3 ***
27173726-C-A 25027579-C-A P1_g3 ***
27173736-G-T 25027589-G-T P1_g3 ***
27173737-C-T 25027590-C-T P1_g3 ***
27173738-A-T 25027591-A-T P1_g3 ***
27337036-G-A 25190889-G-A P1_g3 ***
27337053-G-A 25190906-G-A P1_g3 ***
27337062-G-A 25190915-G-A P1_g3 ***
27337075-T-A 25190928-T-A P1_g3 ***
27337076-C-G 25190929-C-G P1_g3 ***
27337080-A-T 25190933-A-T P1_g3 ***
27337094-C-T 25190947-C-T P1_g3 ***
27370553-T-C 25224406-T-C P1_g3 ***
27398536-G-A 25252389-G-A P1_g3 ***
27499437-G-C 25353290-G-C P1_Y2 ***
27818350-T-C 25672203-T-C P1_Y2 ***
27902499-C-A 25756352-C-A P1_Y2 ***
27902500-T-A 25756353-T-A P1_Y2 ***
27902505-C-A 25756358-C-A P1_Y2 ***
27902506-T-A 25756359-T-A P1_Y2 ***
27902508-C-A 25756361-C-A P1_Y2 ***
27902514-G-A 25756367-G-A P1_Y2 ***
27902520-C-T 25756373-C-T P1_Y2 ***
27902533-A-T 25756386-A-T P1_Y2 ***
27902536-C-T 25756389-C-T P1_Y2 ***
27906012-C-A 25759865-C-A P1_Y2 ***
28014410-T-A 25868263-T-A P1_Y2 ***
28113004-G-A 25966857-G-A P1_Y2 ***
28120791-G-A 25974644-G-A P1_b4 ***
28133402-A-T 25987255-A-T P1_b4 ***
28133413-A-T 25987266-A-T P1_b4 ***
28133414-A-T 25987267-A-T P1_b4 ***
28133416-A-T 25987269-A-T P1_b4 ***
28133417-A-T 25987270-A-T P1_b4 ***
28133435-A-T 25987288-A-T P1_b4 ***
28133436-A-T 25987289-A-T P1_b4 ***
28133437-C-T 25987290-C-T P1_b4 ***
28437138-T-A 26290991-T-A P1_gr2 ***
28491346-G-A 26345199-G-A ***
58819453-C-T 56771418-G-A ***
58823162-C-T 56767709-G-A ***
58823192-C-T 56767679-G-A ***
58823535-C-A 56767336-G-T ***
58825375-G-C 56765496-C-G ***
58827629-G-C 56763242-C-G ***
58827634-T-A 56763237-A-T ***
58833119-A-T 56757752-T-A ***
58840410-C-T 56750461-G-A ***
58842363-C-T 56748508-G-A ***
58843754-C-T 56747117-G-A ***
58847905-G-T 56742966-C-A ***
58847938-T-C 56742933-A-G ***
58851736-T-A 56739135-A-T ***
58851758-C-A 56739113-G-T ***
58870598-C-T 56720273-G-A ***
58875146-A-G 56715725-T-C ***
58882733-C-A 56708138-G-T ***
58894626-A-T 56696245-T-A ***
58898973-T-C 56691898-A-G ***
58912488-C-T 56678383-G-A ***
58912503-C-G 56678368-G-C ***
22537291-G-AA 20375405-G-AA ***
22342627-GT-TA 20180741-GT-TA DYZ19 ***
9380711-TTTTC-CATTG 9543102-TTTTC-CATTG ***
2805552-G-AA 2937511-G-AA ***
13466672-CT-C 11310996-CT-C ***
3483665-CAC-TAT 3615624-CAC-TAT ***
4071991-A-AAC 4203950-A-AAC 14×AC***
4583052-T-TTTTA 4715011-T-TTTTA ***
5770338-C-CTTTTT 5902297-C-CTTTTT 25×T***
5886195-C-TT 6018154-C-TT ***
6026642-TTGTC-T 6158601-TTGTC-T ***
8479399-C-CTTTT 8611358-C-CTTTT 18×T***
9784760-AT-A 9947151-AT-A ***
10034745-TCCCACCG-CCCCCCCC 10197136-TCCCACCG-CCCCCCCC ***
13140106-TT-AC 10629592-TT-AC ***
13463864-CGGGA-TGGGG 11308188-CGGGA-TGGGG ***
13464430-GG-AT 11308754-GG-AT ***
13470314-AG-CA 11314638-AG-CA ***
13470744-GTACC-TAATG 11315068-GTACC-TAATG ***
13483112-TAAA-AAAT 11327436-TAAA-AAAT ***
13483571-CCCT-TCCTG 11327895-CCCT-TCCTG ***
13483917-CGTGA-ACTGT 11328241-CGTGA-ACTGT ***
13485375-ATAACA-GTATCG 11329699-ATAACA-GTATCG ***
13489328-GCA-ACG 11333652-GCA-ACG ***
13606877-C-CAAAAAAAAAA 11451201-C-CAAAAAAAAAA 25×A***
13620448-T-TAAAA 11464772-T-TAAAA 14×A***
13907831-T-TTTTTATTTTA 11787125-T-TTTTTATTTTA 12×TTTTA***
15171226-CTTTTTT-C 13059312-CTTTTTT-C 19×T***
15558495-TAGAT-CAGAC 13446615-TAGAT-CAGAC ***
17062623-CAAAG-GAAAA 14950743-CAAAG-GAAAA ***
18971202-CA-C 16859322-CA-C 11×A***
19025583-GAT-CACCAC 16913703-GAT-CACCAC ***
19086493-TC-CA 16974613-TC-CA ***
19309422-CATAT-C 17197542-CATAT-C 19×AT***
19604828-AC-A 17492948-AC-A P5_Prx ***
19604834-AC-A 17492954-AC-A P5_Prx ***
19937298-ACCCGCTCCA-CCCCCCCCCC 17825418-ACCCGCTCCA-CCCCCCCCCC P5_Prx ***
20242459-CTG-C 18080573-CTG-C P5_Dst ***
22251764-ATTTTTT-GTTTCTA 20089878-ATTTTTT-GTTTCTA DYZ19 ***
22251873-ATCT-TTCA 20089987-ATCT-TTCA DYZ19 ***
22252000-GTGATG-CAGATA 20090114-GTGATG-CAGATA DYZ19 ***
22252035-CATGGT-C 20090149-CATGGT-C DYZ19 ***
22293040-CAC-TAA 20131154-CAC-TAA DYZ19 ***
22318642-GA-G 20156756-GA-G DYZ19 ***
22360134-TTTT-GTC 20198248-TTTT-GTC DYZ19 ***
22366697-TTT-AGG 20204811-TTT-AGG DYZ19 ***
22419808-ATTAGT-CTTTAC 20257922-ATTAGT-CTTTAC DYZ19 ***
22970282-C-CAA 20808396-C-CAA 27×A***
26416299-G-AAAA 24270152-G-AAAA P1_Y1 20×A***
26499952-ATTTTTT-GTGTGTA 24353805-ATTTTTT-GTGTGTA P1_Y1 20×T***
27398536-GC-AA 25252389-GC-AA P1_g3 ***
28798977-GTGGATTGGAG-ATGGGAAGGAA 26652830-GTGGATTGGAG-ATGGGAAGGAA ***
58870540-T-TC 56720328-T-TG ***
58910242-C-CAACA 56680628-G-GTGTT ***
58910254-A-ACTCTG 56680616-A-ACAGAG ***
58917663-NNNNNNNN-N ***
58981999-TCCATTCCAATCCGTG-T 56835852-TCCATTCCAATCCGTG-T ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.