Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > A4556 > 2777444-T-C

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
EBVZW
22459427-G-T 20297541-G-T FGC43891 DYZ19 +
24456886-A-T 22310739-A-T FGC43899 Y+
5760177-C-T 5892136-C-T FGC43861 +
18827016-G-A 16715136-G-A FGC43887 YY+
5910790-C-A 6042749-C-A FGC43862 +
15432998-A-C 13321118-A-C FGC43878 YY+
15321997-C-T 13210115-C-T FGC43877 YY+
15065684-C-T 12953776-C-T FGC43876 YY+
14316314-G-T 12195608-G-T FGC43875 YY+
8675506-C-T 8807465-C-T FGC18082 YY+
14284987-G-C 12164281-G-C FGC43874 YY+
8069378-G-A 8201337-G-A FGC43864 YY+
3382216-A-G 3514175-A-G FGC43858 +
28775487-C-T 26629340-C-T FGC43902 +
9166550-A-C 9328941-A-C FGC43867 Y+
8422516-A-C 8554475-A-C FGC43866 YY+
21209618-G-A 19047732-G-A FGC43889 YY+
18805993-T-C 16694113-T-C FGC43886 YY+
5451231-T-G 5583190-T-G FGC43860 +
23881762-G-A 21719876-G-A FGC43897 Y+
22807476-G-A 20645590-G-A FGC43892 YY+
18124942-G-T 16013062-G-T FGC43883 YY+
18152558-A-G 16040678-A-G FGC43884 Y+
18210548-G-T 16098668-G-T FGC43885 YY+
3361773-ACT-A 3493732-ACT-A +
17044033-G-A 14932153-G-A FGC43882 YY+
9745491-C-T 9907882-C-T FGC43869 +
28720055-G-A 26573908-G-A FGC43854 +
9745140-C-T 9907531-C-T FGC43868 +
23739295-C-T 21577409-C-T FGC43895 +
13430611-C-A 11274935-C-A FGC43870 +
16733249-C-A 14621369-C-A FGC43881 YY+
23104812-C-A 20942926-C-A FGC43893 Y+
4552729-A-G 4684688-A-G FGC43855 +
16339779-A-G 14227899-A-G FGC43880 YY+
8070058-T-C 8202017-T-C FGC43865 YY+
5289257-G-A 5421216-G-A FGC43859 +
25250751-T-C 23104604-T-C FGC43901 P2_r1 *
19319993-C-T 17208113-C-T FGC43888 YY*
13911405-G-C 11790699-G-C FGC43873 Y*
4016969-C-T 4148928-C-T FGC33766 *
16188682-A-T 14076802-A-T Y20229 YY*
7195476-T-G 7327435-T-G **
58970661-C-CT 56824514-C-CT **
59001722-G-A 56855575-G-A **
6419563-G-GTT 6551522-G-GTT **
6016891-A-G 6148850-A-G **
6016977-T-A 6148936-T-A **
23170557-A-T 21008671-A-T **
15148665-A-C 13036752-A-C **
13489108-T-C 11333432-T-C **
5240956-T-TTCCTTCCTTCCC 5372915-T-TTCCTTCCTTCCC 5×TCCC**
18353051-G-A 16241171-G-A P6_Prx **
2888677-C-T 3020636-C-T **
58890137-A-G 56700734-T-C **
59030915-T-A 56884768-T-A **
13459385-G-T 11303709-G-T **
59020952-C-CAG 56874805-C-CAG **
21273485-T-C 19111599-T-C **
22873444-GA-G 20711558-GA-G 8×A**
58973793-T-TCCATCCGATTGCATG 56827646-T-TCCATCCGATTGCATG **
17685626-T-TAA 15573746-T-TAA 9×A**
13260296-T-G 11104620-T-G **
27302802-G-A 25156655-G-A P1_g3 **
21082256-AAAGGAAGG-A 18920370-AAAGGAAGG-A 8×AAGG**
4054849-A-AT 4186808-A-AT **
26269456-A-G 24123309-A-G P1_Y1 ***
27162975-T-A 25016828-T-A P1_g3 ***
26246908-C-A 24100761-C-A P1_Y1 ***
27126479-T-C 24980332-T-C P1_g3 ***
27077921-A-G 24931774-A-G P1_r4 ***
27400961-G-A 25254814-G-A P1_g3 ***
26135183-G-T 23989036-G-T P1_Y1 ***
26321693-G-A 24175546-G-A P1_Y1 ***
27395126-C-A 25248979-C-A P1_g3 ***
26620309-A-G 24474162-A-G P1_g2 ***
26344218-T-G 24198071-T-G P1_Y1 ***
26539507-T-A 24393360-T-A P1_g2 ***
26619968-A-C 24473821-A-C P1_g2 ***
26700679-A-G 24554532-A-G P1_g2 ***
26810643-G-T 24664496-G-T P1_g2 ***
26584198-T-G 24438051-T-G P1_g2 ***
26574286-A-C 24428139-A-C P1_g2 ***
27077166-C-T 24931019-C-T P1_r4 ***
26553841-T-G 24407694-T-G P1_g2 ***
27077172-C-T 24931025-C-T P1_r4 ***
27077453-G-T 24931306-G-T P1_r4 ***
26534726-C-A 24388579-C-A P1_g2 ***
26463802-A-T 24317655-A-T P1_Y1 ***
27077180-C-T 24931033-C-T P1_r4 ***
27077205-C-T 24931058-C-T P1_r4 ***
26620189-A-C 24474042-A-C P1_g2 ***
27077229-G-A 24931082-G-A P1_r4 ***
26435754-C-A 24289607-C-A P1_Y1 ***
26399319-T-G 24253172-T-G P1_Y1 ***
26612460-T-A 24466313-T-A P1_g2 ***
25929200-C-A 23783053-C-A P1_Y1 ***
26091407-C-T 23945260-C-T P1_Y1 ***
24343899-C-A 22197752-C-A P3_t1 ***
24906309-A-C 22760162-A-C g1 ***
24862423-T-A 22716276-T-A P3_b2 ***
24862396-G-A 22716249-G-A P3_b2 ***
24862179-A-G 22716032-A-G P3_b2 ***
24862175-T-G 22716028-T-G P3_b2 ***
24837407-A-T 22691260-A-T P3_b2 ***
24619615-A-C 22473468-A-C P3_t2 ***
24595518-T-C 22449371-T-C P3_t2 ***
24595434-A-C 22449287-A-C P3_t2 ***
24587018-C-A 22440871-C-A P3_t2 ***
24579960-T-G 22433813-T-G P3_t2 ***
24563426-C-T 22417279-C-T P3_t2 ***
24265039-G-T 22118892-G-T P3_b1 ***
24937588-C-G 22791441-C-G g1 ***
24232046-T-C 22085899-T-C P3_b1 ***
24154571-G-C 22008424-G-C P3_b1 ***
24116241-A-C 21970094-A-C P3_b1 ***
23519269-A-G 21357383-A-G ***
23261087-G-T 21099201-G-T ***
23102728-T-C 20940842-T-C ***
22983953-G-T 20822067-G-T ***
22883427-C-A 20721541-C-A ***
22779392-T-A 20617506-T-A ***
22642917-A-G 20481031-A-G ***
22502514-C-G 20340628-C-G DYZ19 ***
22502353-G-T 20340467-G-T DYZ19 ***
22502352-T-A 20340466-T-A DYZ19 ***
24935162-C-G 22789015-C-G g1 ***
24997553-A-G 22851406-A-G g1 ***
26087726-A-T 23941579-A-T P1_Y1 ***
25816369-A-G 23670222-A-G P1_b3 ***
26079933-A-C 23933786-A-C P1_Y1 ***
26059715-T-A 23913568-T-A P1_Y1 ***
26059677-T-A 23913530-T-A P1_Y1 ***
25953472-A-C 23807325-A-C P1_Y1 ***
25942262-A-T 23796115-A-T P1_Y1 ***
25939569-T-C 23793422-T-C P1_Y1 ***
27536595-G-T 25390448-G-T P1_Y2 ***
25929165-T-G 23783018-T-G P1_Y1 ***
25929142-G-A 23782995-G-A P1_Y1 ***
25925642-T-C 23779495-T-C P1_Y1 ***
25925472-T-A 23779325-T-A P1_Y1 ***
25902447-G-A 23756300-G-A P1_Y1 ***
25812747-G-A 23666600-G-A P1_b3 ***
25031697-A-G 22885550-A-G g1 ***
25756293-T-C 23610146-T-C P1_b3 ***
25749236-A-T 23603089-A-T P1_b3 ***
25717386-T-A 23571239-T-A P1_b3 ***
25696021-G-A 23549874-G-A P1_b3 ***
25607000-A-C 23460853-A-C P1_gr1 ***
25566904-G-A 23420757-G-A P1_gr1 ***
25551142-A-G 23404995-A-G P1_gr1 ***
25547162-G-T 23401015-G-T P1_gr1 ***
25347811-A-G 23201664-A-G P2_r1 ***
25323059-A-G 23176912-A-G P2_r1 ***
25282667-G-T 23136520-G-T P2_r1 ***
25090762-C-T 22944615-C-T g1 ***
25067747-C-A 22921600-C-A g1 ***
27483638-A-C 25337491-A-C P1_Y2 ***
20084410-T-C 17972530-T-C P5_Dst ***
27595007-A-C 25448860-A-C P1_Y2 ***
17361056-CTCAA-C 15249176-CTCAA-C ***
27651942-GAT-AAA 25505795-GAT-AAA P1_Y2 ***
26170451-CAGAAGAAGAAGAAGA-C 24024304-CAGAAGAAGAAGAAGA-C P1_Y1 23×AGA***
24388084-A-ATG 22241937-A-ATG ***
22745184-C-CG 20583298-C-CG ***
22310589-AA-CC 20148703-AA-CC DYZ19 ***
21905283-CAAAAAAA-C 19743397-CAAAAAAA-C 16×A***
21346975-T-TTATA 19185089-T-TTATA 29×TA***
21085778-TCA-T 18923892-TCA-T ***
20350451-CA-C 18188565-CA-C P5_Dst 27×A***
18456069-AT-A 16344189-AT-A P6_Dst 15×T***
17527376-GTGTA-ATGTG 15415496-GTGTA-ATGTG ***
17442072-T-TA 15330192-T-TA ***
16990248-G-AA 14878368-G-AA ***
28336647-CAAC-AAAA 26190500-CAAC-AAAA P1_b4 ***
14866158-T-TGTGA 12754228-T-TGTGA ***
14645425-GTTTT-G 12533489-GTTTT-G ***
14612275-A-AGATAGATG 12500481-A-AGATAGATG ***
14026984-T-TCTAA 11906278-T-TCTAA ***
14026957-C-CTATT 11906251-C-CTATT ***
14026944-A-AATAT 11906238-A-AATAT ***
13840856-G-GAATGA 11720150-G-GAATGA ***
13829433-T-TGGAAA 11708727-T-TGGAAA ***
13661298-A-ATGGAC 11505622-A-ATGGAC ***
13611854-GTA-TT 11456178-GTA-TT ***
13474545-CCG-GCC 11318869-CCG-GCC ***
13459382-TTTG-ATTT 11303706-TTTG-ATTT ***
13456030-A-ATTCCT 11300354-A-ATTCCT ***
27791831-TTTCTTCTTCTTC-T 25645684-TTTCTTCTTCTTC-T P1_Y2 22×TTC***
28438187-TC-T 26292040-TC-T P1_gr2 ***
13453474-C-CATTCT 11297798-C-CATTCT ***
58978182-TTCCGT-C 56832035-TTCCGT-C ***
59027039-GA-AC 56880892-GA-AC ***
59020996-CT-TG 56874849-CT-TG ***
59017774-A-ATATATATATATATATATATATATATAT 56871627-A-ATATATATATATATATATATATATATAT ***
59013639-T-TA 56867492-T-TA ***
59013639-T-TATATATA 56867492-T-TATATATA ***
58986670-ATAG-GTAC 56840523-ATAG-GTAC ***
58986462-ACT-A 56840315-ACT-A ***
58986407-AC-TT 56840260-AC-TT ***
58983147-C-CCACTA 56837000-C-CCACTA ***
58979285-TTCG-CTCC 56833138-TTCG-CTCC ***
58979046-CA-GT 56832899-CA-GT ***
58979036-AACTCA-CACTTC 56832889-AACTCA-CACTTC ***
58977099-CATTCA-C 56830952-CATTCA-C ***
28628458-ATT-A 26482311-ATT-A ***
58976969-CTCCACTCCAG-C 56830822-CTCCACTCCAG-C ***
58976457-TG-CT 56830310-TG-CT ***
58975713-CG-C 56829566-CG-C ***
58975529-CTCGATTGCATTCCAT-C 56829382-CTCGATTGCATTCCAT-C ***
58973834-T-TCATGCCATCCTATTC 56827687-T-TCATGCCATCCTATTC ***
58973830-G-GATTGCATGCCATCCT 56827683-G-GATTGCATGCCATCCT ***
58973808-G-GCCATCCGATTGCATT 56827661-G-GCCATCCGATTGCATT ***
58973801-A-ATTGCATGCCATCCGC 56827654-A-ATTGCATGCCATCCGC ***
58973799-C-CGATTGCATGCCATCT 56827652-C-CGATTGCATGCCATCT ***
58973798-C-CCGATTGCATGCCATT 56827651-C-CCGATTGCATGCCATT ***
58973359-GAGTC-AAGTA 56827212-GAGTC-AAGTA ***
58972789-GCA-CCT 56826642-GCA-CCT ***
58910103-CATTC-TATTT 56680764-GAATG-AAATA ***
13454817-C-CATTCT 11299141-C-CATTCT ***
13453472-T-TCCATC 11297796-T-TCCATC ***
27595014-A-C 25448867-A-C P1_Y2 ***
28246290-A-G 26100143-A-G P1_b4 ***
58837591-G-C 56753280-C-G ***
58833553-C-T 56757318-G-A ***
58833535-T-C 56757336-A-G ***
58829844-A-T 56761027-T-A ***
58829800-G-A 56761071-C-T ***
58821666-A-C 56769205-T-G ***
28753358-C-A 26607211-C-A ***
28345655-C-A 26199508-C-A P1_gr2 ***
28336636-T-A 26190489-T-A P1_b4 ***
28336608-G-T 26190461-G-T P1_b4 ***
28336001-G-A 26189854-G-A P1_b4 ***
28253397-C-A 26107250-C-A P1_b4 ***
22502220-C-T 20340334-C-T DYZ19 ***
58844632-A-C 56746239-T-G ***
28120142-A-C 25973995-A-C P1_b4 ***
28119946-G-T 25973799-G-T P1_b4 ***
28119766-G-T 25973619-G-T P1_b4 ***
28116875-A-T 25970728-A-T P1_b4 ***
28096724-G-T 25950577-G-T P1_Y2 ***
28091354-G-T 25945207-G-T P1_Y2 ***
27826697-C-T 25680550-C-T P1_Y2 ***
27809451-T-G 25663304-T-G P1_Y2 ***
27750780-G-A 25604633-G-A P1_Y2 ***
27700936-T-G 25554789-T-G P1_Y2 ***
27668125-C-A 25521978-C-A P1_Y2 ***
27648224-T-A 25502077-T-A P1_Y2 ***
27644448-G-A 25498301-G-A P1_Y2 ***
58839172-T-A 56751699-A-T ***
58850120-A-T 56740751-T-A ***
13452873-GCATTCCATTCCATTCCATTC-G 11297197-GCATTCCATTCCATTCCATTC-G 14×CATTC***
58986652-G-T 56840505-G-T ***
9830994-C-CT 9993385-C-CT ***
8125029-A-AAAAG 8256988-A-AAAAG ***
6419559-T-TTG 6551518-T-TTG ***
5936147-G-GAT 6068106-G-GAT ***
5180585-TATATATATAAGAA-T 5312544-TATATATATAAGAA-T ***
4650472-G-GATAT 4782431-G-GATAT 24×AT***
3628708-TGA-T 3760667-TGA-T ***
3603491-AT-A 3735450-AT-A 24×T***
14756883-T-TA 12644952-T-TA 11×A***
14866142-T-TGTGG 12754212-T-TGTGG ***
59032254-C-T 56886107-C-T ***
59004672-G-A 56858525-G-A ***
58986651-G-C 56840504-G-C ***
58854165-G-C 56736706-C-G ***
58979964-C-G 56833817-C-G ***
58979429-A-T 56833282-A-T ***
58979047-A-T 56832900-A-T ***
58979040-C-T 56832893-C-T ***
58974900-C-A 56828753-C-A ***
58973281-C-T 56827134-C-T ***
58972166-C-A 56826019-C-A ***
58972152-G-C 56826005-G-C ***
58916549-T-A 56674322-A-T ***
58916488-G-A 56674383-C-T ***
58916304-C-A 56674567-G-T ***
58862316-G-T 56728555-C-A ***
58855395-G-T 56735476-C-A ***
28213181-C-A 26067034-C-A P1_b4 ***
21915186-G-A 19753300-G-A ***
22502169-C-A 20340283-C-A DYZ19 ***
22349384-G-A 20187498-G-A DYZ19 ***
22308488-A-T 20146602-A-T DYZ19 ***
22349372-G-T 20187486-G-T DYZ19 ***
58981029-G-A 56834882-G-A ***
22362651-T-G 20200765-T-G DYZ19 ***
58838696-A-T 56752175-T-A ***
5899943-G-A 6031902-G-A ***
22327848-C-T 20165962-C-T DYZ19 ***
13223050-A-G 11067374-A-G ***
22349370-A-C 20187484-A-C DYZ19 ***
22503311-A-C 20341425-A-C DYZ19 ***
9338062-T-G 9500453-T-G ***
13466770-G-A 11311094-G-A ***
4019329-C-A 4151288-C-A ***
28311852-C-A 26165705-C-A P1_b4 ***
6694487-C-T 6826446-C-T ***
27322395-T-C 25176248-T-C P1_g3 ***
22222696-T-A 20060810-T-A DYZ19 ***
27499156-T-A 25353009-T-A P1_Y2 ***
25207678-C-A 23061531-C-A P2_r1 ***
22249082-C-G 20087196-C-G DYZ19 ***
59002261-AAAA-G 56856114-AAAA-G ***
22282129-T-C 20120243-T-C DYZ19 ***
22355095-T-C 20193209-T-C DYZ19 ***
58979909-T-G 56833762-T-G ***
22366610-T-A 20204724-T-A DYZ19 ***
2674547-G-T 2806506-G-T ***
4228796-C-T 4360755-C-T ***
58986417-CT-TG 56840270-CT-TG ***
6329978-T-C 6461937-T-C IR3_Dst ***
9032808-C-A 9195199-C-A ***
8826897-G-T 8958856-G-T ***
8481356-T-A 8613315-T-A ***
8481355-A-T 8613314-A-T ***
8481350-T-A 8613309-T-A ***
8323735-A-T 8455694-A-T ***
8323729-A-T 8455688-A-T ***
8277459-T-C 8409418-T-C ***
8137346-G-T 8269305-G-T ***
8007772-A-G 8139731-A-G ***
7536146-G-A 7668105-G-A ***
6544066-A-G 6676025-A-G ***
6290520-T-A 6422479-T-A IR3_Dst ***
4287676-C-T 4419635-C-T ***
6264686-T-A 6396645-T-A IR3_Dst ***
6253204-C-A 6385163-C-A IR3_Dst ***
6243329-C-A 6375288-C-A IR3_Dst ***
6232870-G-T 6364829-G-T IR3_Dst ***
6186375-T-C 6318334-T-C IR3_Dst ***
5812849-C-T 5944808-C-T ***
5684158-T-C 5816117-T-C ***
5423029-G-T 5554988-G-T ***
5404205-G-A 5536164-G-A ***
5224926-C-A 5356885-C-A 19×A***
5110226-T-A 5242185-T-A ***
4846491-T-C 4978450-T-C ***
22503626-G-A 20341740-G-A DYZ19 ***
13223500-A-G 11067824-A-G ***
9219398-C-T 9381789-C-T ***
22282105-C-T 20120219-C-T DYZ19 ***
59001114-C-T 56854967-C-T ***
19138405-AAT-A 17026525-AAT-A ***
18798674-A-G 16686794-A-G Z22482 ***
58898683-TG-AT 56692187-CA-AT ***
58894681-A-G 56696190-T-C ***
58976137-CTCCAG-ATCCGT 56829990-CTCCAG-ATCCGT ***
59032253-A-AAAACAAAAAAAAAACT 56886106-A-AAAACAAAAAAAAAACT ***
59006826-ATACACAC-A 56860679-ATACACAC-A ***
5289090-T-TAC 5421049-T-TAC 19×AC***
3873202-C-A 4005161-C-A ***
13260863-T-G 11105187-T-G ***
59017778-A-AT 56871631-A-AT 10×AT***
13726907-G-A 11571231-G-A ***
4377969-C-TT 4509928-C-TT 19×T***
14787826-A-T 12675896-A-T ***
59007959-CAAAAAAAAAA-C 56861812-CAAAAAAAAAA-C 26×A***
15491941-GTATATATATA-G 13380061-GTATATATATA-G 19×TA***
22330069-T-G 20168183-T-G DYZ19 ***
22300989-A-G 20139103-A-G DYZ19 ***
22457183-T-G 20295297-T-G DYZ19 ***
59021925-CTAG-GTAGTT 56875778-CTAG-GTAGTT ***
58833510-T-G 56757361-A-C ***
22505177-T-G 20343291-T-G DYZ19 ***
22355779-T-C 20193893-T-C DYZ19 ***
5962109-CATAT-C 6094068-CATAT-C 20×AT***
59032949-T-TTG 56886802-T-TTG ***
59030570-T-TAATATAA 56884423-T-TAATATAA ***
13454818-A-ATTCCT 11299142-A-ATTCCT ***
14709282-A-AG 12597349-A-AG ***
59008780-TTTA-T 56862633-TTTA-T ***
26810657-A-G 24664510-A-G P1_g2 ***
20568364-C-A 18406478-C-A P5_Dst ***
9931164-AT-A 10093555-AT-A 11×T***
25207703-G-A 23061556-G-A P2_r1 ***
24595484-A-G 22449337-A-G P3_t2 ***
13480911-T-G 11325235-T-G ***
59009148-CATG-AATGA 56863001-CATG-AATGA ***
58882946-C-T 56707925-G-A 4×CCATT***
13454812-C-CATTCG 11299136-C-CATTCG ***
22366573-A-G 20204687-A-G DYZ19 ***
19853737-TGC-AGA 17741857-TGC-AGA P5_Prx ***
24646621-C-T 22500474-C-T P3_b2 ***
22421332-C-T 20259446-C-T DYZ19 ***
58986369-TCT-ACC 56840222-TCT-ACC ***
13456027-T-TCCATC 11300351-T-TCCATC ***
22300886-C-T 20139000-C-T DYZ19 ***
13464092-G-A 11308416-G-A ***
28030724-TTTTCTTTC-T 25884577-TTTTCTTTC-T P1_Y2 14×TTTC***
58880442-T-G 56710429-A-C ***
24895683-CT-C 22749536-CT-C g1 18×T***
22421286-GAAC-CAAT 20259400-GAAC-CAAT DYZ19 ***
22357675-TTCG-ATCA 20195789-TTCG-ATCA DYZ19 ***
3588094-GTATATA-G 3720053-GTATATA-G 24×TA***
27060137-G-T 24913990-G-T P1_r4 ***
25207610-T-A 23061463-T-A P2_r1 ***
9195860-A-C 9358251-A-C ***
9219523-G-T 9381914-G-T ***
22482687-G-T 20320801-G-T DYZ19 ***
20404346-T-G 18242460-T-G P5_Dst ***
20662006-C-A 18500120-C-A P4_Prx ***
20645877-G-A 18483991-G-A P4_Prx ***
20602711-C-T 18440825-C-T P5_Dst ***
20549160-T-A 18387274-T-A P5_Dst ***
20532604-C-T 18370718-C-T P5_Dst ***
20511067-G-T 18349181-G-T P5_Dst ***
20501715-C-A 18339829-C-A P5_Dst ***
20490086-C-T 18328200-C-T P5_Dst ***
20434749-A-G 18272863-A-G P5_Dst ***
20404427-C-A 18242541-C-A P5_Dst ***
20404389-T-G 18242503-T-G P5_Dst ***
20404317-C-T 18242431-C-T P5_Dst ***
20771760-C-T 18609874-C-T P4_Prx ***
20136435-G-A 18024555-G-A P5_Dst ***
20014767-T-C 17902887-T-C P5_Prx ***
19846293-G-T 17734413-G-T P5_Prx ***
19846228-G-T 17734348-G-T P5_Prx ***
19755843-C-T 17643963-C-T P5_Prx ***
19740526-C-A 17628646-C-A P5_Prx ***
19604448-G-T 17492568-G-T P5_Prx ***
19425452-A-G 17313572-A-G ***
19250738-G-A 17138858-G-A ***
19085755-C-A 16973875-C-A ***
18818352-T-A 16706472-T-A ***
18818346-T-A 16706466-T-A ***
20707584-C-T 18545698-C-T P4_Prx ***
20891123-G-A 18729237-G-A P4_Dst ***
18492310-A-T 16380430-A-T P6_Dst ***
22344596-A-T 20182710-A-T DYZ19 ***
22457211-G-C 20295325-G-C DYZ19 ***
22434630-G-T 20272744-G-T DYZ19 ***
22367387-T-G 20205501-T-G DYZ19 ***
22366595-T-A 20204709-T-A DYZ19 ***
22365262-C-G 20203376-C-G DYZ19 ***
22365249-T-A 20203363-T-A DYZ19 ***
22365223-G-T 20203337-G-T DYZ19 ***
22354933-A-G 20193047-A-G DYZ19 ***
22354892-A-T 20193006-A-T DYZ19 ***
22352820-T-C 20190934-T-C DYZ19 ***
22352806-G-A 20190920-G-A DYZ19 ***
22349341-A-C 20187455-A-C DYZ19 ***
22338194-A-T 20176308-A-T DYZ19 ***
21030590-A-C 18868704-A-C P4_Dst ***
22330455-G-C 20168569-G-C DYZ19 ***
22322810-A-G 20160924-A-G DYZ19 ***
22292718-A-G 20130832-A-G DYZ19 ***
22292052-A-T 20130166-A-T DYZ19 ***
22236994-G-A 20075108-G-A DYZ19 ***
22236943-C-A 20075057-C-A DYZ19 ***
22236881-A-T 20074995-A-T DYZ19 ***
22354955-C-T 20193069-C-T DYZ19 ***
21829199-T-A 19667313-T-A ***
21634376-T-A 19472490-T-A ***
21380295-G-C 19218409-G-C ***
21197691-G-A 19035805-G-A ***
18504272-A-T 16392392-A-T P6_Dst ***
18480101-C-A 16368221-C-A P6_Dst ***
9225737-C-A 9388128-C-A ***
13223285-A-G 11067609-A-G ***
13488763-C-A 11333087-C-A ***
13488760-T-C 11333084-T-C ***
13482788-G-T 11327112-G-T ***
13474566-A-G 11318890-A-G ***
13465795-G-T 11310119-G-T ***
13383632-T-G 11227956-T-G ***
13328975-C-T 11173299-C-T ***
13312752-G-A 11157076-G-A ***
13309831-A-T 11154155-A-T ***
13253217-C-T 11097541-C-T ***
13223365-C-G 11067689-C-G ***
13223182-A-G 11067506-A-G ***
13489567-C-A 11333891-C-A ***
13223071-A-G 11067395-A-G ***
13125342-T-C 10614828-T-C ***
13116674-C-T 10606160-C-T ***
9753793-C-T 9916184-C-T ***
9624026-C-A 9786417-C-A IR3_Prx ***
9623158-T-G 9785549-T-G IR3_Prx ***
9582771-A-G 9745162-A-G IR3_Prx ***
9545564-C-G 9707955-C-G IR3_Prx ***
9525843-C-A 9688234-C-A ***
9502271-A-C 9664662-A-C ***
9236251-T-G 9398642-T-G ***
9230814-G-A 9393205-G-A ***
13488827-G-T 11333151-G-T ***
13489589-T-A 11333913-T-A ***
18463330-C-A 16351450-C-A P6_Dst ***
16097085-A-C 13985205-A-C ***
18441994-A-T 16330114-A-T P6_Dst ***
18398230-C-T 16286350-C-T P6_Gap ***
18337796-C-T 16225916-C-T P6_Prx ***
18307852-G-A 16195972-G-A P6_Prx ***
18306413-G-T 16194533-G-T P6_Prx ***
17990872-A-C 15878992-A-C P7_Prx ***
17828799-C-A 15716919-C-A ***
17230386-T-C 15118506-T-C ***
17090031-C-T 14978151-C-T ***
16999342-T-C 14887462-T-C ***
16427036-A-G 14315156-A-G ***
16161483-T-G 14049603-T-G P8_Dst ***
15808678-A-T 13696798-A-T ***
13611306-T-A 11455630-T-A ***
15646848-T-C 13534968-T-C ***
14690551-G-A 12578617-G-A ***
14625864-G-A 12514133-G-A ***
14261173-G-C 12140467-G-C ***
14256463-C-T 12135757-C-T ***
14182403-A-C 12061697-A-C ***
14178834-T-G 12058128-T-G ***
14118949-T-A 11998243-T-A ***
13741037-G-T 11585361-G-T ***
13740673-G-T 11584997-G-T ***
13727875-G-T 11572199-G-T ***
13704189-T-A 11548513-T-A ***
59030569-T-TTAATA 56884422-T-TTAATA ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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