Tree Position

R-P312/S116 > Z40481 > ZZ37 > L624/S389 > Z30600 > FGC45484

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
9RDVD
14016716-G-A 11896010-G-A FGC45494 Y+
3047042-G-A 3179001-G-A FGC45471 +
22549998-G-T 20388112-G-T FGC45509 YY+
4874086-G-T 5006045-G-T FGC45476 +
5383452-T-C 5515411-T-C FGC45478 +
5535524-T-G 5667483-T-G FGC45479 +
5617635-T-C 5749594-T-C FGC45480 +
5814640-G-A 5946599-G-A FGC45481 +
5815387-T-G 5947346-T-G FGC45482 +
3754790-A-G 3886749-A-G FGC45474 +
5977217-T-C 6109176-T-C FGC45483 +
23787682-T-C 21625796-T-C FGC45514 +
21224874-G-A 19062988-G-A FGC45505 YY+
15273100-C-T 13161189-C-T ZS2327 YY+
4281810-T-C 4413769-T-C FGC45475 +
3077886-G-A 3209845-G-A FGC45472 +
21298734-G-A 19136848-G-A FGC45506 YY+
8786499-G-A 8918458-G-A FGC45488 YY+
13620630-C-G 11464954-C-G FGC45492 +
13411189-T-C 11255513-T-C FGC45491 +
9832658-T-C 9995049-T-C FGC45490 YY+
21856386-C-T 19694500-C-T FGC45508 YY+
17080421-A-G 14968541-A-G FGC45499 YY+
14451409-T-G 12330682-T-G FGC45497 Y+
16711262-A-T 14599382-A-T FGC45498 YY+
14271366-C-T 12150660-C-T FGC45496 Y*
5072290-C-T 5204249-C-T FGC45477 *
27829523-G-A 25683376-G-A FGC45518 P1_Y2 *
25335816-C-T 23189669-C-T FGC45517 P2_r1 *
3617486-G-C 3749445-G-C FGC45473 *
22692123-T-C 20530237-T-C FGC45510 Y*
21664607-T-G 19502721-T-G FGC45507 YY*
22877486-G-T 20715600-G-T FGC45512 Y*
27633564-C-T 25487417-C-T P1_Y2 **
6346082-TTATATATATATATATATATATATATATATA-T 6478041-TTATATATATATATATATATATATATATATA-T 21×TA**
13389169-T-G 11233493-T-G **
5650593-AACAC-A 5782552-AACAC-A 18×AC**
15889659-G-T 13777779-G-T **
13295461-C-T 11139785-C-T **
16499602-A-T 14387722-A-T **
3295904-T-TA 3427863-T-TA 10×A**
16819021-C-T 14707141-C-T **
3511893-A-C 3643852-A-C **
13316779-T-C 11161103-T-C **
2759904-A-G 2891863-A-G FGC24768 **
22541898-A-G 20380012-A-G **
4783309-G-T 4915268-G-T **
22237270-A-C 20075384-A-C DYZ19 **
13838421-AGAATGGAATG-A 11717715-AGAATGGAATG-A 9×GAATG**
22237289-A-C 20075403-A-C DYZ19 **
25334556-T-C 23188409-T-C P2_r1 **
8501689-CTCTTCTTCT-C 8633648-CTCTTCTTCT-C 18×TCT**
8125062-G-GAGAGAAGAGAAGAGA 8257021-G-GAGAGAAGAGAAGAGA 12×AGAGA**
15278816-A-ATTATATTATATTATT **
13868409-C-CGGAAT 11747703-C-CGGAAT 10×GGAAT**
28716718-G-A 26570571-G-A **
22237258-G-A 20075372-G-A DYZ19 **
26352901-A-C 24206754-A-C P1_Y1 ***
25323119-G-T 23176972-G-T P2_r1 ***
25323244-G-T 23177097-G-T P2_r1 ***
26344249-C-A 24198102-C-A P1_Y1 14×A***
26477282-A-T 24331135-A-T P1_Y1 ***
26335625-G-A 24189478-G-A P1_Y1 ***
26315668-A-C 24169521-A-C P1_Y1 ***
26315567-T-A 24169420-T-A P1_Y1 ***
25359192-G-T 23213045-G-T P2_r2 ***
26315502-T-A 24169355-T-A P1_Y1 ***
26516542-C-T 24370395-C-T P1_Y1 ***
26311099-C-A 24164952-C-A P1_Y1 ***
25370341-T-A 23224194-T-A P2_r2 ***
25730698-G-T 23584551-G-T P1_b3 ***
25456373-C-A 23310226-C-A P2_r2 ***
25979951-G-T 23833804-G-T P1_Y1 ***
25646352-G-A 23500205-G-A P1_b3 ***
25730987-G-C 23584840-G-C P1_b3 ***
25845130-C-A 23698983-C-A P1_b3 ***
25626254-G-T 23480107-G-T P1_b3 ***
25865848-T-C 23719701-T-C P1_Y1 ***
25926801-G-T 23780654-G-T P1_Y1 ***
26025711-G-A 23879564-G-A P1_Y1 ***
25505641-G-T 23359494-G-T P1_gr1 ***
26043546-C-T 23897399-C-T P1_Y1 ***
26121059-C-A 23974912-C-A P1_Y1 ***
26137989-C-A 23991842-C-A P1_Y1 ***
25508961-G-T 23362814-G-T P1_gr1 ***
26285545-C-A 24139398-C-A P1_Y1 ***
25728414-G-A 23582267-G-A P1_b3 ***
22936288-C-CT 20774402-C-CT 25×T***
24922878-T-A 22776731-T-A g1 ***
25318257-A-T 23172110-A-T P2_r1 ***
22361589-A-C 20199703-A-C DYZ19 ***
22502337-A-G 20340451-A-G DYZ19 ***
22500435-T-C 20338549-T-C DYZ19 ***
22500403-C-A 20338517-C-A DYZ19 ***
22500311-T-A 20338425-T-A DYZ19 ***
22500308-G-A 20338422-G-A DYZ19 ***
22500260-G-A 20338374-G-A DYZ19 ***
22453760-G-A 20291874-G-A DYZ19 ***
22422132-C-T 20260246-C-T DYZ19 ***
22420941-A-G 20259055-A-G DYZ19 ***
22368026-T-G 20206140-T-G DYZ19 ***
22365785-T-A 20203899-T-A DYZ19 ***
22358529-C-G 20196643-C-G DYZ19 ***
22502777-C-A 20340891-C-A DYZ19 ***
22357000-C-A 20195114-C-A DYZ19 ***
22355518-A-C 20193632-A-C DYZ19 ***
22344423-T-C 20182537-T-C DYZ19 ***
22343638-G-C 20181752-G-C DYZ19 ***
22341235-G-T 20179349-G-T DYZ19 ***
22338963-T-A 20177077-T-A DYZ19 ***
22338895-G-A 20177009-G-A DYZ19 ***
22330464-G-C 20168578-G-C DYZ19 ***
22323205-G-A 20161319-G-A DYZ19 ***
22323039-C-G 20161153-C-G DYZ19 ***
22313487-A-T 20151601-A-T DYZ19 ***
22310695-G-T 20148809-G-T DYZ19 ***
22502605-G-T 20340719-G-T DYZ19 ***
22503161-C-T 20341275-C-T DYZ19 ***
25247528-C-T 23101381-C-T P2_r1 ***
24245328-T-A 22099181-T-A P3_b1 ***
25059904-C-A 22913757-C-A g1 ***
24997138-A-G 22850991-A-G g1 ***
24972715-A-C 22826568-A-C g1 ***
24972706-C-T 22826559-C-T g1 ***
26570921-G-T 24424774-G-T P1_g2 ***
24858907-C-A 22712760-C-A P3_b2 ***
24771053-A-T 22624906-A-T P3_b2 ***
24727195-A-C 22581048-A-C P3_b2 ***
24712472-G-T 22566325-G-T P3_b2 ***
24673793-G-T 22527646-G-T P3_b2 ***
24588667-A-C 22442520-A-C P3_t2 ***
24554117-A-G 22407970-A-G P3_t2 ***
24235555-T-A 22089408-T-A P3_b1 ***
22503859-T-G 20341973-T-G DYZ19 ***
24077168-T-G 21931021-T-G P3_b1 ***
23569695-G-C 21407809-G-C ***
23516918-T-A 21355032-T-A ***
23321579-T-A 21159693-T-A ***
23288246-G-T 21126360-G-T ***
22876941-C-A 20715055-C-A ***
22692338-C-A 20530452-C-A ***
22530879-G-A 20368993-G-A ***
22504941-C-A 20343055-C-A DYZ19 ***
22504928-G-T 20343042-G-T DYZ19 ***
22504911-A-C 20343025-A-C DYZ19 ***
22503869-C-T 20341983-C-T DYZ19 ***
26517654-A-G 24371507-A-G P1_Y1 ***
27319997-C-T 25173850-C-T P1_g3 ***
26599473-T-C 24453326-T-C P1_g2 ***
7199342-CTTTT-C 7331301-CTTTT-C 24×T***
13730574-AAATGT-GAATGA 11574898-AAATGT-GAATGA ***
13602399-A-AGGAC 11446723-A-AGGAC ***
13531753-CAAAAAAAA-C 11376077-CAAAAAAAA-C 23×A***
13485663-AG-CA 11329987-AG-CA ***
13478258-AGTGG-CGTGA 11322582-AGTGG-CGTGA ***
13456026-T-TTCCAC 11300350-T-TTCCAC ***
13258166-G-GT 11102490-G-GT 10×T***
13138407-CCATT-C 10627893-CCATT-C ***
9847289-ATTTTTT-A 10009680-ATTTTTT-A 28×T***
9605871-TA-T 9768262-TA-T IR3_Prx 16×A***
8578111-TTTATTTA-T 8710070-TTTATTTA-T ***
7076862-T-TAGAA 7208821-T-TAGAA ***
13845541-AAATGGAATGGAATGGAATGGAATGG-A 11724835-AAATGGAATGGAATGGAATGGAATGG-A 8×AATGG***
6591777-C-CA 6723736-C-CA 8×A***
5441542-CCCCAGGTCAA-TCCCCGGACAG 5573501-CCCCAGGTCAA-TCCCCGGACAG ***
5209997-CAAAAA-C 5341956-CAAAAA-C 16×A***
15324319-CTTT-C 13212437-CTTT-C 25×T***
5110127-T-TA 5242086-T-TA 12×A***
3603491-ATT-A 3735450-ATT-A 24×T***
9975414-CT-GC 10137805-CT-GC ***
58903169-G-T 56687702-C-A ***
58900710-G-C 56690161-C-G ***
58899757-C-G 56691114-G-C ***
58899326-C-T 56691545-G-A ***
58895848-C-T 56695023-G-A ***
13838196-GGAAT-G 11717490-GGAAT-G ***
14031726-C-CTTTCTTTT 11911020-C-CTTTCTTTT ***
58892701-A-C 56698170-T-G ***
22344349-TTTT-ATTG 20182463-TTTT-ATTG DYZ19 ***
58885575-CTCC-TTCA 56705293-GGAG-TGAA ***
58866021-C-CCCATCCCATTCCATCCCATT 56724845-A-AATGGAATGGGATGGAATGGG 12×CCATT***
58830618-ACG-GCA 56760251-CGT-TGC ***
58828084-ATTCCATTCGAGTCCATTCCAATCCCTTCCATTCCATTCCAATAGATTCCATTCCTTTGCC-A 56762716-TTCGAATGGAAGGCAAAGGAATGGAATCTATTGGAATGGAATGGAAGGGATTGGAATGGAC-T ***
25651684-CTCCT-C 23505537-CTCCT-C P1_b3 13×TCCT***
24447129-A-AAGAAAGAT 22300982-A-AAGAAAGAT ***
24355647-C-CAT 22209500-C-CAT ***
23491386-A-AATAGATAACTATGCAATGAATCGAACATCTCTGAGAGAATGCTGGAATTCAGC 21329500-A-AATAGATAACTATGCAATGAATCGAACATCTCTGAGAGAATGCTGGAATTCAGC ***
23311147-TTTTCTTTC-T 21149261-TTTTCTTTC-T 15×TTTC***
22703594-TCAAA-T 20541708-TCAAA-T ***
22502592-TTT-ATC 20340706-TTT-ATC DYZ19 ***
22316428-T-TG 20154542-T-TG DYZ19 ***
14031742-C-CTTTCTTTT 11911036-C-CTTTCTTTT ***
22310725-GT-G 20148839-GT-G DYZ19 ***
22252524-CCTTCTTT-TCTTATAG 20090638-CCTTCTTT-TCTTATAG DYZ19 ***
22252501-TTCAGT-ATAAGA 20090615-TTCAGT-ATAAGA DYZ19 ***
21425339-CTTT-C 19263453-CTTT-C 24×T***
20942951-CA-C 18781065-CA-C P4_Dst 13×A***
19513143-CTTTT-C 17401263-CTTTT-C 20×T***
19121920-CTTTTTT-C 17010040-CTTTTTT-C 17×T***
18395723-T-TTATATATA 16283843-T-TTATATATA P6_Gap 27×TA***
17951299-ATTT-A 15839419-ATTT-A 25×T***
15138012-CTTT-C 13026099-CTTT-C 15×T***
14819052-TTTG-T 12707119-TTTG-T ***
14533050-ACCCG-CCCCC 12421251-ACCCG-CCCCC ***
58892966-A-G 56697905-T-C ***
58875675-A-C 56715196-T-G ***
26632298-G-T 24486151-G-T P1_g2 ***
27298265-G-C 25152118-G-C P1_g3 ***
27633160-C-A 25487013-C-A P1_Y2 ***
27575447-C-A 25429300-C-A P1_Y2 ***
27544096-A-G 25397949-A-G P1_Y2 ***
27484760-A-G 25338613-A-G P1_Y2 ***
27483202-C-A 25337055-C-A P1_Y2 ***
27466164-G-T 25320017-G-T P1_Y2 ***
27444438-A-G 25298291-A-G P1_Y2 ***
27382954-G-C 25236807-G-C P1_g3 8×A***
27329814-C-A 25183667-C-A P1_g3 ***
27329423-C-G 25183276-C-G P1_g3 ***
22304956-C-T 20143070-C-T DYZ19 ***
27264135-A-T 25117988-A-T P1_g3 ***
27691453-C-A 25545306-C-A P1_Y2 ***
27234261-C-A 25088114-C-A P1_g3 ***
27222173-T-A 25076026-T-A P1_g3 ***
27217520-T-G 25071373-T-G P1_g3 ***
27202386-G-A 25056239-G-A P1_g3 ***
27077182-G-T 24931035-G-T P1_r4 ***
27040534-T-C 24894387-T-C P1_r4 ***
27039717-A-T 24893570-A-T P1_r4 ***
26760305-G-T 24614158-G-T P1_g2 ***
26759925-G-A 24613778-G-A P1_g2 ***
26735365-A-T 24589218-A-T P1_g2 ***
26714722-C-T 24568575-C-T P1_g2 ***
26646792-G-A 24500645-G-A P1_g2 ***
27691420-C-A 25545273-C-A P1_Y2 ***
27733663-T-C 25587516-T-C P1_Y2 ***
58872496-C-T 56718375-G-A ***
58845510-T-A 56745361-A-T ***
58869676-C-A 56721195-G-T ***
58869201-C-A 56721670-G-T ***
58865450-T-C 56725421-A-G ***
58865392-C-G 56725479-G-C ***
58854854-G-A 56736017-C-T ***
58854804-T-A 56736067-A-T ***
58854778-G-A 56736093-C-T ***
58854757-C-A 56736114-G-T ***
58853153-A-T 56737718-T-A ***
58853144-A-T 56737727-T-A ***
58848048-T-G 56742823-A-C ***
58830243-C-T 56760628-G-A ***
27814803-G-A 25668656-G-A P1_Y2 ***
58830113-C-A 56760758-G-T ***
58828181-T-G 56762690-A-C ***
28401270-G-A 26255123-G-A P1_gr2 ***
28369013-G-T 26222866-G-T P1_gr2 ***
28281193-C-A 26135046-C-A P1_b4 ***
28034632-T-C 25888485-T-C P1_Y2 ***
27998480-T-C 25852333-T-C P1_Y2 ***
27998476-A-G 25852329-A-G P1_Y2 ***
27991287-T-G 25845140-T-G P1_Y2 ***
27938506-T-G 25792359-T-G P1_Y2 ***
27935157-A-G 25789010-A-G P1_Y2 ***
27893555-C-A 25747408-C-A P1_Y2 ***
22310542-A-T 20148656-A-T DYZ19 ***
20645905-A-G 18484019-A-G P4_Prx ***
22304946-A-G 20143060-A-G DYZ19 ***
22241265-A-T 20079379-A-T DYZ19 ***
58874840-G-C 56716031-C-G ***
9975485-A-G 10137876-A-G ***
58833171-T-C 56757700-A-G ***
22333052-A-T 20171166-A-T DYZ19 ***
20252755-C-A 18090869-C-A P5_Dst ***
22341305-C-G 20179419-C-G DYZ19 ***
24388084-A-ATT 22241937-A-ATT ***
5240905-C-CCCTT 5372864-C-CCCTT 13×CCTT***
28355900-A-G 26209753-A-G P1_gr2 ***
28336640-G-A 26190493-G-A P1_b4 ***
22349381-A-T 20187495-A-T DYZ19 ***
9192445-C-T 9354836-C-T ***
22241266-A-G 20079380-A-G DYZ19 ***
22357655-A-G 20195769-A-G DYZ19 ***
22323067-A-T 20161181-A-T DYZ19 ***
22323002-C-A 20161116-C-A DYZ19 ***
58837591-G-C 56753280-C-G ***
27077172-C-T 24931025-C-T P1_r4 ***
27077161-C-A 24931014-C-A P1_r4 ***
22330455-G-C 20168569-G-C DYZ19 ***
22252501-T-A 20090615-T-A DYZ19 ***
13727875-G-T 11572199-G-T ***
22349372-G-T 20187486-G-T DYZ19 ***
58911792-C-G 56679079-G-C ***
58904491-T-C 56686380-A-G ***
28311852-C-A 26165705-C-A P1_b4 ***
4225631-G-A 4357590-G-A ***
6193707-C-G 6325666-C-G IR3_Dst ***
6150714-T-A 6282673-T-A IR3_Dst ***
5963591-T-C 6095550-T-C ***
5785644-C-A 5917603-C-A ***
5130522-G-T 5262481-G-T ***
4848341-C-A 4980300-C-A ***
4826443-T-C 4958402-T-C ***
4619420-C-A 4751379-C-A ***
4517054-G-A 4649013-G-A A3668 15×A***
4225931-A-G 4357890-A-G ***
4225730-T-G 4357689-T-G ***
4224144-T-G 4356103-T-G ***
58901695-T-C 56689176-A-G ***
4081280-C-A 4213239-C-A ***
3462513-A-G 3594472-A-G ***
3372547-A-G 3504506-A-G ***
58914644-A-G 56676227-T-C ***
27483421-A-G 25337274-A-G P1_Y2 ***
22362782-A-T 20200896-A-T DYZ19 ***
58892686-A-T 56698185-T-A ***
58863112-C-G 56727759-G-C ***
58986228-C-A 56840081-C-A ***
9975404-A-G 10137795-A-G ***
58904568-A-T 56686303-T-A ***
22349384-G-A 20187498-G-A DYZ19 ***
3822962-G-GAT 3954921-G-GAT 26×AT***
6664049-C-T 6796008-C-T ***
3878644-C-CAAA 4010603-C-CAAA 15×A***
7723948-CT-C 7855907-CT-C 25×T***
58819898-G-C 56770973-C-G ***
24771093-G-T 22624946-G-T P3_b2 ***
13485554-GTGG-ATGT 11329878-GTGG-ATGT ***
19386989-TTATATATAATATAATATTATATATATTA-T 17275109-TTATATATAATATAATATTATATATATTA-T ***
25207652-T-A 23061505-T-A P2_r1 ***
58820187-A-C 56770684-T-G ***
25207751-A-G 23061604-A-G P2_r1 ***
13485649-T-A 11329973-T-A ***
7532276-GTATA-G 7664235-GTATA-G 28×TA***
17030992-CAAAAAA-C 14919112-CAAAAAA-C 19×A***
22262570-A-T 20100684-A-T DYZ19 ***
58847716-G-A 56743155-C-T ***
19309422-C-CATAT 17197542-C-CATAT 19×AT***
23633371-C-CT 21471485-C-CT 21×T***
28700731-CTA-C 26554584-CTA-C 17×TA***
58820272-C-T 56770599-G-A ***
16344411-T-TTCTTCA 14232531-T-TTCTTCA ***
9199939-A-AT 9362330-A-AT ***
13727938-T-A 11572262-T-A ***
22504921-T-C 20343035-T-C DYZ19 ***
27377672-T-C 25231525-T-C P1_g3 ***
22504040-C-A 20342154-C-A DYZ19 ***
16340170-C-AA 14228290-C-AA ***
22320998-T-C 20159112-T-C DYZ19 ***
27499302-G-A 25353155-G-A P1_Y2 ***
19753483-A-C 17641603-A-C P5_Prx ***
15047301-T-TC 12935392-T-TC ***
22266580-C-CA 20104694-C-CA DYZ19 ***
22266501-A-G 20104615-A-G DYZ19 ***
9210723-T-C 9373114-T-C ***
19926979-GTA-TTT 17815099-GTA-TTT P5_Prx ***
58891022-A-T 56699849-T-A ***
25466190-C-A 23320043-C-A P2_r2 ***
22367597-T-G 20205711-T-G DYZ19 ***
22330456-T-A 20168570-T-A DYZ19 ***
22252528-C-A 20090642-C-A DYZ19 ***
22252524-C-T 20090638-C-T DYZ19 ***
9362310-G-C 9524701-G-C ***
22321002-C-A 20159116-C-A DYZ19 ***
22341368-G-A 20179482-G-A DYZ19 ***
7532276-GTATATATA-G 7664235-GTATATATA-G 28×TA***
16533223-TTGTATATTATGTATACATATA-T 14421343-TTGTATATTATGTATACATATA-T ***
13466719-GAGCA-ATGCG 11311043-GAGCA-ATGCG ***
13454818-A-ATTCCC 11299142-A-ATTCCC ***
9429040-TTGCA-CTGCG 9591431-TTGCA-CTGCG ***
22287095-GTG-TTT 20125209-GTG-TTT DYZ19 ***
58869425-C-G 56721446-G-C ***
58869411-C-A 56721460-G-T ***
58986201-CACAT-AACCC 56840054-CACAT-AACCC ***
22355517-G-C 20193631-G-C DYZ19 ***
6313510-G-T 6445469-G-T IR3_Dst ***
6664052-C-G 6796011-C-G ***
22291630-G-T 20129744-G-T DYZ19 ***
18622818-G-A 16510938-G-A ***
19668718-C-A 17556838-C-A P5_Prx ***
19668179-C-A 17556299-C-A P5_Prx ***
19436894-A-G 17325014-A-G ***
19388046-G-T 17276166-G-T ***
19013228-T-A 16901348-T-A ***
18869419-T-A 16757539-T-A ***
18800823-A-T 16688943-A-T ***
18795300-T-A 16683420-T-A ***
18622853-T-C 16510973-T-C ***
18622829-C-T 16510949-C-T ***
18622803-T-C 16510923-T-C ***
19724847-T-C 17612967-T-C P5_Prx ***
18622789-T-C 16510909-T-C ***
18622786-C-T 16510906-C-T ***
18622754-A-G 16510874-A-G ***
18428475-G-A 16316595-G-A P6_Dst ***
18328890-G-C 16217010-G-C P6_Prx ***
18307921-C-T 16196041-C-T P6_Prx ***
18261674-C-A 16149794-C-A ***
18231647-A-C 16119767-A-C ***
17932975-G-A 15821095-G-A ***
17920928-C-T 15809048-C-T ***
17901908-T-C 15790028-T-C ***
19668723-G-A 17556843-G-A P5_Prx ***
20085001-G-T 17973121-G-T P5_Dst ***
17617446-A-G 15505566-A-G ***
21500903-G-T 19339017-G-T ***
22286074-A-T 20124188-A-T DYZ19 ***
22268127-T-A 20106241-T-A DYZ19 ***
22252530-T-A 20090644-T-A DYZ19 ***
22252503-C-A 20090617-C-A DYZ19 ***
22252487-C-T 20090601-C-T DYZ19 ***
22252480-C-T 20090594-C-T DYZ19 ***
22247991-G-T 20086105-G-T DYZ19 ***
22237055-T-C 20075169-T-C DYZ19 ***
22154715-G-A 19992829-G-A ***
21796201-C-A 19634315-C-A ***
21617603-T-A 19455717-T-A ***
21042592-C-A 18880706-C-A ***
20103743-C-T 17991863-C-T P5_Dst ***
20951212-T-G 18789326-T-G P4_Dst ***
20658367-T-A 18496481-T-A P4_Prx ***
20648229-G-A 18486343-G-A P4_Prx ***
19829299-CT-C 17717419-CT-C P5_Prx 27×T***
20645745-G-A 18483859-G-A P4_Prx ***
20472530-A-T 18310644-A-T P5_Dst ***
20459508-C-T 18297622-C-T P5_Dst ***
20301662-A-G 18139776-A-G P5_Dst ***
20138425-C-T 18026545-C-T P5_Dst ***
20125714-A-T 18013834-A-T P5_Dst ***
20105202-A-G 17993322-A-G P5_Dst ***
17824437-T-A 15712557-T-A ***
17617440-A-G 15505560-A-G ***
6710202-T-G 6842161-T-G ***
9526175-G-A 9688566-G-A ***
9975396-C-T 10137787-C-T ***
9912742-C-A 10075133-C-A ***
9783776-C-A 9946167-C-A ***
9747199-G-T 9909590-G-T ***
9677768-C-A 9840159-C-A IR3_Prx ***
9639476-T-A 9801867-T-A IR3_Prx ***
9623438-T-G 9785829-T-G IR3_Prx ***
9620392-G-A 9782783-G-A IR3_Prx ***
9557091-G-T 9719482-G-T IR3_Prx ***
9555565-T-C 9717956-T-C IR3_Prx ***
9438382-G-T 9600773-G-T ***
9975499-T-C 10137890-T-C ***
9372594-C-T 9534985-C-T ***
9347220-G-T 9509611-G-T ***
9299615-T-C 9462006-T-C ***
9210606-A-G 9372997-A-G ***
9207954-C-T 9370345-C-T ***
9182872-C-T 9345263-C-T ***
9032690-T-C 9195081-T-C ***
8293453-T-C 8425412-T-C ***
8167566-T-A 8299525-T-A ***
7277115-C-A 7409074-C-A ***
7203648-C-A 7335607-C-A ***
9975492-T-A 10137883-T-A ***
10041667-G-A 10204058-G-A ***
17160521-G-C 15048641-G-C ***
13393558-G-T 11237882-G-T ***
17084998-C-A 14973118-C-A ***
17024742-C-A 14912862-C-A ***
16995374-T-A 14883494-T-A ***
15839463-G-T 13727583-G-T ***
15806584-G-T 13694704-G-T ***
14164743-T-G 12044037-T-G ***
13716448-G-A 11560772-G-A ***
13485525-T-A 11329849-T-A ***
13474451-G-C 11318775-G-C ***
13470903-G-T 11315227-G-T ***
13465842-T-C 11310166-T-C ***
13393255-G-A 11237579-G-A ***
10085384-T-C 10247775-T-C ***
13383604-C-T 11227928-C-T ***
13316646-C-T 11160970-C-T ***
13260594-T-C 11104918-T-C ***
13253801-A-G 11098125-A-G ***
13253370-C-T 11097694-C-T ***
13253216-G-C 11097540-G-C ***
13223799-C-G 11068123-C-G ***
13222941-A-G 11067265-A-G ***
13205549-C-T 11049873-C-T ***
13201767-A-T 11046091-A-T ***
13108218-T-A 10597704-T-A ***
58980227-AG-TGCACTCCACTC 56834080-AG-TGCACTCCACTC ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 9RDVD1534026898796198456878
Used in age calculations1534026898796198456878
Counts of SNPs1510
Variant counts last updated 2017-11-05 23:09:47.



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