Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > L513/S215/DF1 > S5668 > Z16357 > Z16343 > Z17911 > 14092445-C-T

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
275990
BigY2
275990
28817069-C-A 26670922-C-A A*
20041472-C-T 17929592-C-T P5_Prx ***A*
26021569-T-A 23875422-T-A P1_Y1 ***A*
17550281-C-T 15438401-C-T A11136 YY++
9132352-G-A 9294743-G-A A11130 Y++
6916797-T-C 7048756-T-C A11129 Y**+
22246487-A-C 20084601-A-C DYZ19 +
13691125-A-T 11535449-A-T A11131 ++
14819258-C-T 12707325-C-T A11133 YY++
14325025-T-G 12204319-T-G **
14306308-A-C 12185602-A-C **
14384913-T-G 12264209-T-G **
14385026-A-AT 12264322-A-AT **
14424968-GGATCATCTGAGGTTAGGA-G 12304243-GGATCATCTGAGGTTAGGA-G **
14306304-A-C 12185598-A-C **
14284754-G-C 12164048-G-C **
14284733-C-A 12164027-C-A **
14251561-G-T 12130855-G-T **
14250552-C-A 12129846-C-A **
18963884-C-A 16852004-C-A ****
14430411-A-C 12309684-A-C **
14230116-G-A 12109410-G-A **
14463329-C-A 12342602-C-A **
14474638-C-G 12353907-C-G **
14485980-C-A 12365249-C-A **
14508538-C-A 12396743-C-A **
14531109-C-G 12419310-C-G **
14567131-C-A 12455331-C-A **
14589244-G-T 12477444-G-T **
14608158-C-A 12496360-C-A **
14717550-G-A 12605618-G-A **
14738262-G-T 12626330-G-T **
14794498-C-A 12682569-C-A **
14794534-C-A 12682605-C-A **
14250532-A-C 12129826-A-C **
14074160-C-A 11953454-C-A **
14228698-C-A 12107992-C-A **
13971656-TCAGGCAGGCAGG-T 11850950-TCAGGCAGGCAGG-T 8×CAGG**
11677703-G-T **
13873985-T-C 11753279-T-C **
13896980-A-C 11776274-A-C **
13902741-C-A 11782035-C-A **
13926493-A-C 11805787-A-C **
13926557-T-G 11805851-T-G **
13929266-T-G 11808560-T-G **
13944465-A-G 11823759-A-G **
13971626-G-GAA 11850920-G-GAA **
13971631-A-AAAGG 11850925-A-AAAGG **
13971640-G-GA 11850934-G-GA **
13989001-C-T 11868295-C-T **
14213180-C-A 12092474-C-A **
14000212-C-A 11879506-C-A **
14000387-G-T 11879681-G-T **
14011379-G-T 11890673-G-T **
14015223-C-A 11894517-C-A **
14015234-C-A 11894528-C-A **
14023145-G-T 11902439-G-T **
14068410-C-A 11947704-C-A **
14074116-G-A 11953410-G-A **
14858809-A-T 12746875-A-T **
14076064-G-A 11955358-G-A **
14180561-C-A 12059855-C-A **
14802966-A-G 12691037-A-G **
15081392-A-C 12969482-A-C **
14858876-C-A 12746942-C-A **
16048968-G-T 13937088-G-T **
15761758-T-G 13649878-T-G **
15767045-C-A 13655165-C-A **
15770177-T-A 13658297-T-A **
15775371-C-A 13663491-C-A **
15775452-G-T 13663572-G-T **
15928679-G-A 13816799-G-A **
15967501-TCC-T 13855621-TCC-T **
16004126-G-T 13892246-G-T **
16014383-C-A 13902503-C-A **
16017756-T-C 13905876-T-C **
16050999-TTTC-T 13939119-TTTC-T **
15741603-T-G 13629723-T-G **
16057195-G-T 13945315-G-T **
16071249-T-C 13959369-T-C **
16077530-T-G 13965650-T-G **
16093021-G-C 13981141-G-C **
16210815-G-T 14098935-G-T **
16216759-T-G 14104879-T-G **
16216806-G-T 14104926-G-T **
16272173-C-A 14160293-C-A **
16279209-C-A 14167329-C-A **
16412351-CA-C 14300471-CA-C **
16421851-G-A 14309971-G-A **
15756477-G-T 13644597-G-T **
15685305-C-A 13573425-C-A **
14858936-G-T 12747002-G-T **
15369984-T-C 13258104-T-C **
14961886-A-C 12849961-A-C **
14986046-C-A 12874114-C-A **
11675491-C-A **
15115349-G-C 13003436-G-C **
15171466-G-T 13059552-G-T **
15173609-C-A 13061695-C-A **
15189596-G-T 13077682-G-T **
15248093-G-T 13136179-G-T **
15280283-C-A 13168382-C-A **
15280307-C-A 13168406-C-A **
15342411-C-A 13230530-C-A **
15396725-A-G 13284845-A-G **
15630401-G-T 13518521-G-T **
15397509-A-C 13285629-A-C **
15397524-T-C 13285644-T-C **
15401200-G-T 13289320-G-T **
15402887-G-T 13291007-G-T **
15403455-C-A 13291575-C-A **
15404246-T-G 13292366-T-G **
15420126-C-A 13308246-C-A **
15431964-A-T 13320084-A-T **
15432741-T-C 13320861-T-C **
15541989-A-G 13430109-A-G **
15599842-G-T 13487962-G-T **
11676461-G-T **
11651191-G-T **
11664771-G-T **
10841906-C-G **
10784346-C-A **
10785659-T-A **
10786599-T-G **
10793259-C-A **
10798680-TGCA-T **
10798684-C-CGTT **
10798696-C-G **
10805460-A-C **
10822319-T-G **
10825174-C-G **
10842023-C-A **
10780303-C-A **
10850343-C-T **
10864989-T-C **
10869060-C-A **
10874496-C-A **
10880340-T-G **
10889897-C-A **
10895560-G-T **
10900747-C-G **
10900750-C-T **
10906065-C-A **
10906569-G-C **
10780328-C-A **
10778922-T-A **
10927098-C-G **
10682619-C-A **
10018243-G-T 10180634-G-T **
10040031-G-T 10202422-G-T **
24583305-G-T 22437158-G-T P3_t2 **
10061358-T-G 10223749-T-G **
10624376-G-T **
10666867-T-C **
10669042-C-T **
10671172-C-A **
10671698-A-G **
10678781-A-C **
10678785-C-A **
10744843-C-A **
10766123-T-C **
10747076-AC-A **
10752940-C-G **
10756204-T-A **
10756211-C-G **
10756231-C-A **
10756236-C-T **
10756239-C-T **
10756259-C-T **
10756271-C-G **
10756294-T-A **
10758487-A-T **
10914522-C-A **
10936794-C-A **
11662567-C-A **
13519052-T-C 11363376-T-C **
13290949-G-T 11135273-G-T **
13360860-G-T 11205184-G-T **
13402736-T-G 11247060-T-G **
13417057-T-G 11261381-T-G **
13433304-A-G 11277628-A-G **
13476285-A-G 11320609-A-G **
13483261-T-G 11327585-T-G **
13483279-C-A 11327603-C-A **
13486647-A-T 11330971-A-T **
13511675-C-G 11355999-C-G **
13515613-G-T 11359937-G-T **
13540926-G-T 11385250-G-T **
13253861-C-T 11098185-C-T **
13540932-A-C 11385256-A-C **
13540941-G-T 11385265-G-T **
13550774-T-C 11395098-T-C **
13610953-G-T 11455277-G-T **
13620200-G-T 11464524-G-T **
11642951-C-T **
11650281-G-C **
16426742-C-G 14314862-C-G **
11653594-A-G **
11653606-C-A **
11658057-C-T **
13289155-C-A 11133479-C-A **
13253389-T-C 11097713-T-C **
10938666-T-G **
11005100-TCA-T **
10940528-C-CT **
10947975-C-A **
10950791-C-T **
10953805-A-T **
10953834-C-A **
10960719-C-A **
10964796-C-A **
10982574-TCCATTC-T **
10998781-G-T **
11003745-C-CCCCGTTCCTG **
11005072-T-C **
11005160-C-A **
13236159-T-G 11080483-T-G **
11007755-C-A **
11009197-G-T **
11028181-A-AT **
11028183-G-GCCAC **
11028194-C-A **
11028240-C-T **
11032913-C-A **
11037418-T-A **
13205447-C-A 11049771-C-A **
13221979-G-T 11066303-G-T **
13226603-G-A 11070927-G-A **
16426690-G-A 14314810-G-A **
16635875-C-A 14523995-C-A **
16430915-G-T 14319035-G-T **
23019651-C-A 20857765-C-A **
22517265-C-A 20355379-C-A **
22517292-T-C 20355406-T-C **
22546182-G-C 20384296-G-C **
22624457-A-G 20462571-A-G **
22654997-A-T 20493111-A-T **
22767458-C-A 20605572-C-A **
22774963-C-A 20613077-C-A **
22843740-CTTTT-C 20681854-CTTTT-C 12×T**
22874277-C-G 20712391-C-G **
23007809-A-C 20845923-A-C **
23019658-C-A 20857772-C-A **
22345997-C-TTG 20184111-C-TTG DYZ19 **
23035873-A-T 20873987-A-T **
23076333-C-A 20914447-C-A **
23082091-C-A 20920205-C-A **
23126507-G-T 20964621-G-T **
23127797-A-G 20965911-A-G **
23136981-C-T 20975095-C-T **
23200216-A-T 21038330-A-T **
23200219-G-C 21038333-G-C **
23260789-A-C 21098903-A-C **
23260797-C-A 21098911-C-A **
23341233-G-T 21179347-G-T **
22359694-C-A 20197808-C-A DYZ19 **
22340059-T-C 20178173-T-C DYZ19 **
23434307-A-C 21272421-A-C **
21836556-A-G 19674670-A-G **
21475607-C-A 19313721-C-A **
21476829-C-A 19314943-C-A **
21495607-C-A 19333721-C-A **
21526849-A-G 19364963-A-G **
21635210-T-A 19473324-T-A **
21677450-C-A 19515564-C-A **
21678040-A-C 19516154-A-C **
21748010-A-C 19586124-A-C **
21748196-C-A 19586310-C-A **
21770218-T-C 19608332-T-C **
21836543-A-C 19674657-A-C **
21910232-C-A 19748346-C-A **
22321503-T-A 20159617-T-A DYZ19 **
21954988-G-T 19793102-G-T **
21969332-C-A 19807446-C-A **
21969347-A-G 19807461-A-G **
21991274-A-G 19829388-A-G **
22011830-T-C 19849944-T-C **
22084839-C-A 19922953-C-A **
22084853-A-C 19922967-A-C **
22124190-C-G 19962304-C-G **
22211314-C-A 20049428-C-A **
22253019-G-A 20091133-G-A DYZ19 **
22263792-A-G 20101906-A-G DYZ19 **
23341518-G-T 21179632-G-T **
23449037-A-G 21287151-A-G **
21459126-G-T 19297240-G-T **
28654085-C-A 26507938-C-A **
28518838-G-T 26372691-G-T **
28519706-G-T 26373559-G-T **
28535581-T-G 26389434-T-G **
28543019-C-A 26396872-C-A **
28553775-A-G 26407628-A-G **
28566953-C-A 26420806-C-A **
28596767-T-C 26450620-T-C **
28603293-G-T 26457146-G-T **
28606014-A-G 26459867-A-G **
28609466-C-A 26463319-C-A **
28633644-C-A 26487497-C-A **
28695055-G-T 26548908-G-T **
28465997-C-A 26319850-C-A **
28700604-C-A 26554457-C-A **
28701989-T-C 26555842-T-C **
28727779-A-G 26581632-A-G **
28728405-C-G 26582258-C-G **
28732059-G-T 26585912-G-T **
28755807-C-G 26609660-C-G **
28763279-G-T 26617132-G-T **
28800809-G-T 26654662-G-T **
28815138-G-C 26668991-G-C **
56841315-G-T **
56867611-A-G **
28518795-T-C 26372648-T-C **
27935976-C-G 25789829-C-G P1_Y2 **
23505117-C-T 21343231-C-T **
24583292-G-T 22437145-G-T P3_t2 **
23742140-C-T 21580254-C-T **
23742349-C-T 21580463-C-T **
23786383-C-A 21624497-C-A **
23818548-A-C 21656662-A-C **
23875522-G-T 21713636-G-T **
21780530-C-A **
24052430-G-T 21906283-G-T P3_b1 **
24109056-C-A 21962909-C-A P3_b1 **
24381305-T-C 22235158-T-C **
24466301-T-G 22320154-T-G **
24513603-G-T 22367456-G-T **
24583326-G-T 22437179-G-T P3_t2 **
27396747-G-T 25250600-G-T P1_g3 **
24583335-GG-T 22437188-GG-T P3_t2 9×GT**
25533576-T-A 23387429-T-A P1_gr1 **
25955210-A-AG 23809063-A-AG P1_Y1 **
25995482-A-G 23849335-A-G P1_Y1 **
25995490-G-T 23849343-G-T P1_Y1 **
26010311-C-CATAT 23864164-C-CATAT P1_Y1 **
26015375-C-A 23869228-C-A P1_Y1 **
26030978-A-AC 23884831-A-AC P1_Y1 **
26032884-G-T 23886737-G-T P1_Y1 **
26242597-A-C 24096450-A-C P1_Y1 **
26248217-T-C 24102070-T-C P1_Y1 **
21464535-TCAAAA-T 19302649-TCAAAA-T **
21408939-C-A 19247053-C-A **
16480008-C-A 14368128-C-A **
17479125-C-A 15367245-C-A **
17183235-C-A 15071355-C-A **
17203337-T-A 15091457-T-A **
17215903-C-A 15104023-C-A **
17221118-G-T 15109238-G-T **
17250946-C-A 15139066-C-A **
17375027-C-A 15263147-C-A **
17380672-C-T 15268792-C-T **
17406914-C-A 15295034-C-A **
17464953-G-T 15353073-G-T **
17465014-T-G 15353134-T-G **
17544978-A-C 15433098-A-C **
17151418-T-C 15039538-T-C **
17605545-C-A 15493665-C-A **
17616907-A-G 15505027-A-G **
17648679-A-G 15536799-A-G **
17666568-A-C 15554688-A-C **
17701860-T-C 15589980-T-C **
17779458-C-A 15667578-C-A **
17859819-G-T 15747939-G-T **
17859821-G-T 15747941-G-T **
18173174-A-G 16061294-A-G **
18407010-A-T 16295130-A-T P6_Gap **
18430095-A-AG 16318215-A-AG P6_Dst **
17181834-C-A 15069954-C-A **
17103557-G-T 14991677-G-T **
18651162-C-A 16539282-C-A **
16978641-A-G 14866761-A-G **
16481143-T-C 14369263-T-C **
16583301-C-T 14471421-C-T **
16625804-C-A 14513924-C-A **
10012837-C-A 10175228-C-A **
16635944-T-C 14524064-T-C **
16654596-G-A 14542716-G-A **
16662642-C-A 14550762-C-A **
16707642-C-A 14595762-C-A **
16738490-G-T 14626610-G-T **
16932113-A-G 14820233-A-G **
16938234-T-C 14826354-T-C **
16999281-C-G 14887401-C-G **
17085772-G-T 14973892-G-T **
17002672-G-T 14890792-G-T **
17002740-G-T 14890860-G-T **
17034976-A-G 14923096-A-G **
17034996-A-C 14923116-A-C **
17035002-C-T 14923122-C-T **
17035019-A-G 14923139-A-G **
17035025-A-T 14923145-A-T **
17035035-G-C 14923155-G-C **
17035079-G-A 14923199-G-A **
17035089-T-A 14923209-T-A **
17058767-C-A 14946887-C-A **
18618953-T-A 16507073-T-A **
18707303-T-G 16595423-T-G **
21361875-C-A 19199989-C-A **
20802097-C-T 18640211-C-T P4_Prx **
19625155-G-T 17513275-G-T P5_Prx **
19663372-A-T 17551492-A-T P5_Prx **
19728173-A-G 17616293-A-G P5_Prx **
19728315-T-C 17616435-T-C P5_Prx **
19792673-T-TG 17680793-T-TG P5_Prx **
19842258-C-A 17730378-C-A P5_Prx **
20369908-G-A 18208022-G-A P5_Dst **
20409521-A-G 18247635-A-G P5_Dst **
20425956-G-C 18264070-G-C P5_Dst **
20426018-G-T 18264132-G-T P5_Dst **
20570207-T-G 18408321-T-G P5_Dst **
20809744-T-G 18647858-T-G P4_Gap **
19479841-C-A 17367961-C-A **
20888452-A-G 18726566-A-G P4_Dst **
20904131-G-T 18742245-G-T P4_Dst **
20989080-A-C 18827194-A-C P4_Dst **
21141148-A-G 18979262-A-G **
21141164-T-G 18979278-T-G **
21177012-C-A 19015126-C-A **
21220871-A-C 19058985-A-C **
21220874-A-C 19058988-A-C **
21220906-G-C 19059020-G-C **
21234882-A-T 19072996-A-T **
21334728-C-A 19172842-C-A **
19609608-A-T 17497728-A-T P5_Prx **
19479165-C-T 17367285-C-T **
18707851-G-T 16595971-G-T **
19075263-T-C 16963383-T-C **
18731142-C-A 16619262-C-A **
18932154-C-G 16820274-C-G **
18965872-C-A 16853992-C-A **
18976607-G-T 16864727-G-T **
19012512-C-G 16900632-C-G **
19012514-C-G 16900634-C-G **
19014398-C-A 16902518-C-A **
19044415-A-G 16932535-A-G **
19075235-T-C 16963355-T-C **
19075254-G-A 16963374-G-A **
19075255-T-C 16963375-T-C **
19075266-C-T 16963386-C-T **
19449221-G-A 17337341-G-A **
19075267-A-G 16963387-A-G **
19075268-C-T 16963388-C-T **
19125294-A-G 17013414-A-G **
19127667-TACACACACACAC-T 17015787-TACACACACACAC-T 18×AC**
19206702-G-T 17094822-G-T **
19245083-C-A 17133203-C-A **
19254406-G-T 17142526-G-T **
19272120-G-T 17160240-G-T **
19310899-A-G 17199019-A-G **
19356497-C-A 17244617-C-A **
19416407-C-A 17304527-C-A **
10014973-T-G 10177364-T-G **
10061299-A-C 10223690-A-C **
9965200-G-T 10127591-G-T **
10772595-C-A **
9513309-A-G 9675700-A-G **
14562949-C-A 12451149-C-A **
14555043-C-A 12443244-C-A **
10801777-C-CA **
4243716-C-A 4375675-C-A **
3832282-G-A 3964241-G-A **
14250556-A-C 12129850-A-C **
19557409-G-T 17445529-G-T **
23801692-C-A 21639806-C-A **
7108333-C-A 7240292-C-A **
10808032-A-C **
10886379-T-C **
6807980-T-A 6939939-T-A **
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27861862-G-C 25715715-G-C P1_Y2 **
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10998205-C-A **
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4256917-C-A 4388876-C-A **
19507087-C-A 17395207-C-A **
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10686139-T-G **
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6495046-T-C 6627005-T-C **
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15157447-C-A 13045534-C-A **
18793565-G-T 16681685-G-T **
22775400-C-A 20613514-C-A **
11007088-C-A **
23019659-C-A 20857773-C-A **
6505226-A-G 6637185-A-G **
10744840-CTCCAT-C **
16260999-C-A 14149119-C-A **
19663399-A-C 17551519-A-C P5_Prx **
10685731-G-T **
17885807-G-T 15773927-G-T **
24446791-C-A 22300644-C-A **
3603408-C-A 3735367-C-A **
16005210-C-A 13893330-C-A **
10825283-T-C **
15732212-C-A 13620332-C-A **
3124280-G-T 3256239-G-T **
2960421-T-C 3092380-T-C **
2981250-C-A 3113209-C-A **
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3045837-C-A 3177796-C-A **
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2937888-C-A 3069847-C-A **
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9952116-T-A 10114507-T-A **
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3306960-C-A 3438919-C-A **
3334800-C-A 3466759-C-A **
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3411017-T-C 3542976-T-C **
3501118-C-A 3633077-C-A **
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8674109-C-A 8806068-C-A **
7140841-C-A 7272800-C-A **
56850489-G-T **
28764314-C-A 26618167-C-A **
10756273-C-T **
23569153-C-A 21407267-C-A **
10653853-C-A **
26284922-G-T 24138775-G-T P1_Y1 **
10925623-C-A **
24459983-G-T 22313836-G-T **
16045442-C-A 13933562-C-A **
56851958-C-A **
23476170-C-A 21314284-C-A **
16430930-G-T 14319050-G-T **
2916019-A-C 3047978-A-C **
24525547-A-AT 22379400-A-AT P3_t2 **
19213752-C-A 17101872-C-A **
2981252-C-A 3113211-C-A **
5231537-C-A 5363496-C-A **
28728412-A-C 26582265-A-C **
2708289-T-C 2840248-T-C **
2773935-A-T 2905894-A-T **
2775369-G-T 2907328-G-T **
2812946-G-T 2944905-G-T **
2915895-T-G 3047854-T-G **
2916014-T-C 3047973-T-C **
16052164-C-A 13940284-C-A **
10676941-C-A **
3506090-C-A 3638049-C-A **
7385850-G-T 7517809-G-T **
23035858-A-C 20873972-A-C **
22874296-C-A 20712410-C-A **
4160442-C-A 4292401-C-A **
28520670-C-A 26374523-C-A **
10754750-C-A **
13961599-G-T 11840893-G-T **
4756676-C-A 4888635-C-A **
28689257-AT-A 26543110-AT-A 8×T**
7164254-C-A 7296213-C-A **
10787091-C-A **
19012509-C-A 16900629-C-A **
14524050-C-A 12412251-C-A **
10971052-T-A **
14061365-C-A 11940659-C-A **
5817822-C-A 5949781-C-A **
13255380-C-A 11099704-C-A **
7990592-C-A 8122551-C-A **
14760849-C-A 12648918-C-A **
10825344-G-T **
5084753-C-A 5216712-C-A **
11028190-C-T **
5635214-G-T 5767173-G-T **
11659359-C-A **
21148577-C-A 18986691-C-A **
22128793-C-A 19966907-C-A **
10987609-C-A **
13494346-C-A 11338670-C-A **
24575904-T-C 22429757-T-C P3_t2 **
5186754-A-ATG 5318713-A-ATG 16×TG**
17030604-TG-T 14918724-TG-T **
23832872-G-A 21670986-G-A **
17737760-G-T 15625880-G-T **
21388664-TCTC-T 19226778-TCTC-T **
22340066-G-A 20178180-G-A DYZ19 **
59005360-T-A 56859213-T-A 8×A**
59018569-G-T 56872422-G-T **
22149905-C-A 19988019-C-A **
3832277-C-T 3964236-C-T **
19235426-G-C 17123546-G-C ****
19052096-C-A 16940216-C-A **
22359696-T-C 20197810-T-C DYZ19 **
9438130-G-T 9600521-G-T **
22540538-G-A 20378652-G-A 17×TA**
10942479-A-T **
15870483-T-C 13758603-T-C **
13971603-AAGAG-A 11850897-AAGAG-A **
19125352-C-A 17013472-C-A **
10872877-T-G **
10930393-G-C **
16779060-C-A 14667180-C-A **
15909367-C-A 13797487-C-A **
4016318-C-A 4148277-C-A **
7990397-C-A 8122356-C-A **
13238306-C-A 11082630-C-A **
13259112-C-A 11103436-C-A **
9438131-A-T 9600522-A-T **
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21780537-C-A **
10748749-TTCCAC-T **
14366477-C-A 12245772-C-A **
10831435-T-C **
15146334-A-C 13034421-A-C **
17221142-G-T 15109262-G-T **
16077536-T-A 13965656-T-A **
17276228-C-A 15164348-C-A **
10979618-C-A **
14000452-C-A 11879746-C-A **
13329245-G-T 11173569-G-T **
10753190-TATTCCATTCCATTCCATTCC-T **
23742357-T-C 21580471-T-C **
10756241-CTCCTCAACTA-C **
10936791-C-A **
21921996-C-A 19760110-C-A **
4075890-C-A 4207849-C-A **
28728402-C-A 26582255-C-A **
18361506-G-T 16249626-G-T P6_Prx **
17455950-C-A 15344070-C-A **
4262495-C-T 4394454-C-T **
13326100-C-A 11170424-C-A **
11649807-C-A **
23019653-C-A 20857767-C-A **
4439723-C-A 4571682-C-A **
19073627-C-A 16961747-C-A **
6934775-C-A 7066734-C-A **
16989041-C-A 14877161-C-A **
25995541-C-CAA 23849394-C-CAA P1_Y1 **
18130657-C-A 16018777-C-A **
15770664-C-A 13658784-C-A **
7873916-C-A 8005875-C-A **
18183376-C-A 16071496-C-A **
9508018-G-T 9670409-G-T **
19040776-C-A 16928896-C-A **
14499594-G-T 12387799-G-T **
14012192-G-T 11891486-G-T **
14449727-C-A 12329000-C-A **
19605011-G-T 17493131-G-T P5_Prx **
13872791-C-A 11752085-C-A **
6822518-C-A 6954477-C-A **
11029732-C-T **
11029737-C-G **
11029744-T-G **
11029755-C-G **
11029757-A-G **
9887081-T-C 10049472-T-C **
6293371-TTG-T 6425330-TTG-T IR3_Dst **
8734271-C-A 8866230-C-A **
3409580-C-A 3541539-C-A **
3506007-G-C 3637966-G-C **
3275645-G-T 3407604-G-T **
3506110-T-C 3638069-T-C **
7235200-A-G 7367159-A-G **
7143100-G-T 7275059-G-T **
7143140-T-G 7275099-T-G **
7148356-T-C 7280315-T-C **
7149125-C-A 7281084-C-A **
7150761-G-T 7282720-G-T **
7152851-C-A 7284810-C-A **
7159117-G-T 7291076-G-T **
7160859-G-T 7292818-G-T **
7208249-T-C 7340208-T-C **
7208412-T-G 7340371-T-G **
7235206-C-A 7367165-C-A **
7131981-C-A 7263940-C-A **
7235242-C-A 7367201-C-A **
7235249-C-A 7367208-C-A **
7256338-A-C 7388297-A-C **
7276456-A-C 7408415-A-C **
7281847-G-C 7413806-G-C **
7306598-G-T 7438557-G-T **
7314559-A-C 7446518-A-C **
7335728-A-T 7467687-A-T **
7338291-C-T 7470250-C-T **
7360615-C-A 7492574-C-A **
7142317-C-A 7274276-C-A **
7076322-A-T 7208281-A-T **
7407286-G-T 7539245-G-T **
6429801-T-C 6561760-T-C **
5990954-G-T 6122913-G-T **
6023113-C-A 6155072-C-A **
6023116-C-A 6155075-C-A **
6039766-C-A 6171725-C-A **
6050490-C-A 6182449-C-A **
6064276-C-T 6196235-C-T **
6124381-G-T 6256340-G-T **
6134487-G-T 6266446-G-T **
3536434-T-C 3668393-T-C **
6429755-A-C 6561714-A-C **
6445145-G-T 6577104-G-T **
6998031-C-T 7129990-C-T **
6453892-C-A 6585851-C-A **
6460743-T-G 6592702-T-G **
6465314-A-C 6597273-A-C **
6495052-T-A 6627011-T-A **
6505205-G-T 6637164-G-T **
6505210-T-C 6637169-T-C **
6694735-T-G 6826694-T-G **
6752529-C-A 6884488-C-A **
6832078-T-C 6964037-T-C **
6948162-T-G 7080121-T-G **
6981327-A-G 7113286-A-G **
7381415-A-C 7513374-A-C **
7423827-C-A 7555786-C-A **
5931850-G-T 6063809-G-T **
9186280-C-A 9348671-C-A **
8850063-A-G 8982022-A-G **
8855341-C-A 8987300-C-A **
8855535-C-A 8987494-C-A **
8856869-T-A 8988828-T-A **
8914565-C-A 9046524-C-A **
8914573-A-C 9046532-A-C **
8980065-T-G 9142456-T-G **
9171204-A-G 9333595-A-G **
9181046-T-G 9343437-T-G **
9186248-C-A 9348639-C-A **
9424474-C-A 9586865-C-A **
8735569-T-G 8867528-T-G **
9436925-A-C 9599316-A-C **
9451353-C-A 9613744-C-A **
9461845-G-T 9624236-G-T **
9730966-C-G 9893357-C-G IR3_Prx **
9852849-C-A 10015240-C-A **
9887070-C-G 10049461-C-G **
9926681-C-A 10089072-C-A **
9938585-C-A 10100976-C-A **
9938647-A-G 10101038-A-G **
9942426-C-A 10104817-C-A **
9952113-A-G 10114504-A-G **
8849852-C-A 8981811-C-A **
8735537-T-G 8867496-T-G **
7432305-C-G 7564264-C-G **
8002461-C-A 8134420-C-A **
7437176-C-A 7569135-C-A **
7443958-C-A 7575917-C-A **
7534471-C-A 7666430-C-A **
7753546-G-T 7885505-G-T **
7774208-C-A 7906167-C-A **
7782966-A-C 7914925-A-C **
7860259-C-A 7992218-C-A **
7964619-C-A 8096578-C-A **
7964647-A-C 8096606-A-C **
7990442-C-A 8122401-C-A **
8092093-G-T 8224052-G-T **
8712986-C-A 8844945-C-A **
8181369-G-T 8313328-G-T **
8288776-C-A 8420735-C-A **
8290815-T-G 8422774-T-G **
8295475-A-C 8427434-A-C **
8481075-T-C 8613034-T-C **
8481082-TAAAA-T 8613041-TAAAA-T **
8481096-T-A 8613055-T-A **
8481105-T-A 8613064-T-A **
8556344-A-C 8688303-A-C **
8661105-C-A 8793064-C-A **
8678121-T-A 8810080-T-A **
5965718-G-T 6097677-G-T **
56867641-G-A **
4720421-G-T 4852380-G-T **
4798642-A-T 4930601-A-T **
4568366-C-A 4700325-C-A **
4668824-C-G 4800783-C-G **
4671700-G-T 4803659-G-T **
4698047-C-A 4830006-C-A **
4716017-C-A 4847976-C-A **
4720339-G-T 4852298-G-T **
5888259-A-C 6020218-A-C **
4720426-G-T 4852385-G-T **
4779920-G-T 4911879-G-T **
4798704-C-T 4930663-C-T **
4537406-T-G 4669365-T-G **
4832503-T-G 4964462-T-G **
3820973-A-G 3952932-A-G **
4863630-C-A 4995589-C-A **
4905615-C-A 5037574-C-A **
4925272-G-C 5057231-G-C **
4930422-A-T 5062381-A-T **
4930477-G-T 5062436-G-T **
4952961-A-C 5084920-A-C **
4952995-C-A 5084954-C-A **
3817246-G-T 3949205-G-T **
4567057-T-A 4699016-T-A **
4533451-CA-C 4665410-CA-C 9×A**
4067271-C-G 4199230-C-G **
4393786-C-T 4525745-C-T **
4223478-A-C 4355437-A-C **
4229378-G-T 4361337-G-T **
4230170-C-A 4362129-C-A **
4286110-A-C 4418069-A-C **
4302592-C-A 4434551-C-A **
4017136-T-C 4149095-T-C **
4308888-G-T 4440847-G-T **
4016278-C-A 4148237-C-A **
3978348-C-A 4110307-C-A **
4374196-A-G 4506155-A-G **
4393829-GA-G 4525788-GA-G 8×A**
4521975-C-A 4653934-C-A **
3961020-G-C 4092979-G-C **
3934629-C-A 4066588-C-A **
3869549-C-A 4001508-C-A **
4444463-T-C 4576422-T-C **
4486176-C-A 4618135-C-A **
4508594-G-T 4640553-G-T **
3862807-G-A 3994766-G-A **
3861122-G-A 3993081-G-A **
4509453-AT-A 4641412-AT-A **
3831519-G-C 3963478-G-C **
3800102-C-A 3932061-C-A **
4988688-G-T 5120647-G-T **
5000616-C-A 5132575-C-A **
5697723-A-C 5829682-A-C **
3640497-T-G 3772456-T-G **
5586626-C-G 5718585-C-G **
5625479-G-T 5757438-G-T **
5625499-G-T 5757458-G-T **
5635236-G-A 5767195-G-A **
5647755-T-C 5779714-T-C **
5650977-T-C 5782936-T-C **
5695168-G-T 5827127-G-T **
5697584-A-C 5829543-A-C **
3621275-G-A 3753234-G-A **
5011103-G-T 5143062-G-T **
3599055-G-T 3731014-G-T **
5724574-T-G 5856533-T-G **
5728137-G-T 5860096-G-T **
5752260-G-T 5884219-G-T **
5761058-T-G 5893017-T-G **
5808381-T-A 5940340-T-A **
5844580-A-G 5976539-A-G **
3560464-A-G 3692423-A-G **
5876371-C-G 6008330-C-G **
5876504-A-T 6008463-A-T **
5465284-C-CTG 5597243-C-CTG **
4095036-T-A 4226995-T-A **
5396553-G-T 5528512-G-T **
5200255-G-T 5332214-G-T **
3800100-C-A 3932059-C-A **
5015320-G-A 5147279-G-A **
5034295-G-T 5166254-G-T **
5048245-C-A 5180204-C-A **
5074069-A-T 5206028-A-T **
5170509-T-A 5302468-T-A **
5171480-C-A 5303439-C-A **
3704475-A-G 3836434-A-G **
5174105-C-A 5306064-C-A **
3697209-C-A 3829168-C-A **
5243663-T-C 5375622-T-C **
5299885-A-C 5431844-A-C **
5346048-G-T 5478007-G-T **
5364141-C-A 5496100-C-A **
5364241-A-C 5496200-A-C **
3688998-T-G 3820957-T-G **
9188776-CT-C 9351167-CT-C ***
10661569-CAGTCT-C,CATTCT ***
15967454-C-A 13855574-C-A ***
56850779-C-T ***
10669654-A-ACCATTCCATTCCATTCCATT ***
22502653-G-C 20340767-G-C DYZ19 ***
10661565-A-G ***
10661560-A-G ***
15701123-G-T 13589243-G-T ***
11666490-A-T ***
8568543-C-A 8700502-C-A ***
14232745-C-A 12112039-C-A ***
10993084-C-A ***
10661564-C-T ***
17103239-G-T 14991359-G-T ***
10661568-C-T ***
22919325-G-GTT 20757439-G-GTT 20×T***
21583832-C-A 19421946-C-A ***
21738577-C-A 19576691-C-A ***
10780578-C-A,T ***
10653153-C-A ***
21939718-C-A 19777832-C-A ***
10661589-C-A ***
14213316-C-A 12092610-C-A ***
18959070-C-A 16847190-C-A ***
25885830-A-T 23739683-A-T P1_Y1 ***
10984010-C-A ***
14311696-C-A 12190990-C-A ***
7237830-C-A 7369789-C-A ***
7342185-G-T 7474144-G-T ***
10888622-C-A ***
23741932-C-A 21580046-C-A ***
23779767-C-A 21617881-C-A ***
8138179-C-A 8270138-C-A ***
15113479-C-A 13001566-C-A ***
7991063-C-A 8123022-C-A ***
10809029-GTTCCA-G ***
8379106-C-A 8511065-C-A ***
2858448-G-T 2990407-G-T ***
13571023-G-A 11415347-G-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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