Tree Position

R-P312/S116 > Z40481 > ZZ11 > U152/S28 > L2/S139 > Z41150 > FGC11577

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
2QAKU
18059576-G-A 15947696-G-A FGC11604 Y+
19019342-A-T 16907462-A-T FGC11607 Y+
3683215-C-T 3815174-C-T FGC11570 +
21412832-C-A 19250946-C-A FGC11613 YY+
21292002-C-A 19130116-C-A FGC11612 YY+
16471070-G-T 14359190-G-T FGC11598 Y+
6712417-A-T 6844376-A-T FGC11580 Y+
6797013-C-G 6928972-C-G FGC11581 YY+
19054754-A-G 16942874-A-G FGC11608 YY+
7014753-A-C 7146712-A-C FGC11582 YY+
7543135-G-C 7675094-G-C FGC11583 YY+
18595408-G-A 16483528-G-A FGC11605 YY+
17262832-C-T 15150952-C-T FGC11600 Y+
9674970-A-G 9837361-A-G FGC11589 IR3_Prx +
9643288-G-A 9805679-G-A FGC11588 IR3_Prx +
7900439-C-T 8032398-C-T FGC11584 YY+
17270214-G-T 15158334-G-T FGC11601 Y+
17393576-G-T 15281696-G-T FGC11602 YY+
19460683-ACT-A 17348803-ACT-A +
17747973-G-A 15636093-G-A FGC11603 YY+
28697731-A-G 26551584-A-G FGC11622 +
22181700-A-T 20019814-A-T FGC11616 YY+
15229670-G-A 13117756-G-A FGC11566 Y+
15281930-G-A 13170029-G-A FGC11568 Y+
14284874-G-A 12164168-G-A FGC11592 YY+
28661257-G-A 26515110-G-A FGC11621 Y+
28711862-G-T 26565715-G-T FGC11623 Y+
3949143-C-T 4081102-C-T FGC11571 +
23111331-G-A 20949445-G-A FGC11619 Y+
13511481-T-C 11355805-T-C FGC11590 +
23787396-G-T 21625510-G-T FGC11620 +
14024144-G-T 11903438-G-T FGC11591 YY+
5540080-T-C 5672039-T-C FGC11574 +
5862534-G-T 5994493-G-T FGC11576 +
19362245-C-G 17250365-C-G FGC11611 YY+
2796575-TA-T 2928534-TA-T +
19180005-T-A 17068125-T-A FGC11610 Y+
19157457-C-A 17045577-C-A FGC11609 YY+
6462279-C-A 6594238-C-A FGC11578 +
14876108-T-C 12764178-T-C FGC11593 YY+
28739882-AT-A 26593735-AT-A +
8611337-G-A 8743296-G-A FGC11585 YY+
5859242-T-G 5991201-T-G FGC11575 *
9734538-C-G 9896929-C-G FGC11567 IR3_Prx *
6523153-G-T 6655112-G-T FGC11579 *
4842925-C-A 4974884-C-A FGC11573 *
4622720-G-C 4754679-G-C FGC11572 *
3216254-C-A 3348213-C-A FGC11569 *
22543507-C-A 20381621-C-A FGC11617 Y*
9738570-T-C 9900961-T-C IR3_Prx **
14717294-G-T 12605362-G-T **
58881574-G-GTCCATTCCAATCCCT 56709287-A-ATGGAATGGAAGGGAT **
58880279-CATTACACTCCAGTCT-C 56710571-AGTAATAGACTGGAGT-A **
13863567-T-C 11742861-T-C **
23076577-T-A 20914691-T-A **
58852212-C-G 56738659-G-C **
9789137-A-AT 9951528-A-AT 9×T**
24462947-T-C 22316800-T-C **
13518312-C-T 11362636-C-T **
24462948-A-G 22316801-A-G **
5689704-C-CATTATT 5821663-C-CATTATT 14×ATT**
24462958-G-A 22316811-G-A **
58894876-G-A 56695995-C-T FGC45455 **
14717293-G-T 12605361-G-T **
6359770-C-T 6491729-C-T **
28680422-CATTTATTTATTTATTTATTT-C 26534275-CATTTATTTATTTATTTATTT-C 11×ATTT**
9980011-T-C 10142402-T-C **
15491939-GTGTA-G 13380059-GTGTA-G **
14747534-A-AAATAATAAT 12635603-A-AAATAATAAT 12×AAT**
58881051-G-T 56709820-C-A FGC8357 **
22424098-G-T 20262212-G-T DYZ19 **
7426514-T-C 7558473-T-C **
15674327-A-G 13562447-A-G **
7426513-T-G 7558472-T-G **
26089707-T-C 23943560-T-C P1_Y1 **
16046149-C-A 13934269-C-A Y19553 **
10070851-C-G 10233242-C-G **
58833207-T-G 56757664-A-C ***
58829291-G-T 56761580-C-A ***
28791348-G-A 26645201-G-A ***
58829284-C-A 56761587-G-T ***
28791350-A-T 26645203-A-T ***
28791363-C-G 26645216-C-G ***
58829286-C-T 56761585-G-A ***
58819504-C-A 56771367-G-T ***
28791375-A-G 26645228-A-G ***
58843669-C-T 56747202-G-A ***
58820277-A-T 56770594-T-A ***
58840484-T-C 56750387-A-G ***
58829289-T-A 56761582-A-T ***
58820312-T-C 56770559-A-G ***
28058732-G-A 25912585-G-A P1_Y2 ***
28433601-G-A 26287454-G-A P1_gr2 ***
24783507-G-T 22637360-G-T P3_b2 ***
26462230-T-C 24316083-T-C P1_Y1 ***
26368164-A-G 24222017-A-G P1_Y1 ***
26368102-C-G 24221955-C-G P1_Y1 ***
26368096-T-G 24221949-T-G P1_Y1 ***
26368052-G-A 24221905-G-A P1_Y1 ***
26368033-A-G 24221886-A-G P1_Y1 ***
26368015-G-A 24221868-G-A P1_Y1 ***
26355745-T-C 24209598-T-C P1_Y1 ***
26355735-T-A 24209588-T-A P1_Y1 ***
26127229-T-A 23981082-T-A P1_Y1 ***
25604855-G-A 23458708-G-A P1_gr1 ***
25604458-A-G 23458311-A-G P1_gr1 ***
24710099-A-T 22563952-A-T P3_b2 12×TAT***
26992903-G-T 24846756-G-T P1_r4 ***
24624084-T-G 22477937-T-G P3_t2 ***
24624042-A-G 22477895-A-G P3_t2 ***
24624027-C-T 22477880-C-T P3_t2 ***
24595855-A-G 22449708-A-G P3_t2 ***
24595790-C-T 22449643-C-T P3_t2 ***
24530553-G-A 22384406-G-A P3_t2 ***
24278042-A-T 22131895-A-T P3_b1 ***
24242875-A-G 22096728-A-G P3_b1 ***
24241246-C-T 22095099-C-T P3_b1 ***
24223610-G-A 22077463-G-A P3_b1 ***
23228563-T-C 21066677-T-C ***
22534479-T-C 20372593-T-C ***
26992902-A-T 24846755-A-T P1_r4 ***
27156587-G-A 25010440-G-A P1_g3 ***
28433596-G-A 26287449-G-A P1_gr2 ***
28058627-T-A 25912480-T-A P1_Y2 ***
28430218-G-A 26284071-G-A P1_gr2 ***
28384328-T-A 26238181-T-A P1_gr2 ***
28370209-G-A 26224062-G-A P1_gr2 ***
28362059-G-T 26215912-G-T P1_gr2 ***
28302471-G-T 26156324-G-T P1_b4 ***
28107444-C-T 25961297-C-T P1_Y2 ***
28086913-G-A 25940766-G-A P1_Y2 ***
28086906-G-A 25940759-G-A P1_Y2 ***
28058734-T-C 25912587-T-C P1_Y2 ***
58846214-C-G 56744657-G-C ***
28058727-C-T 25912580-C-T P1_Y2 ***
28058724-G-A 25912577-G-A P1_Y2 ***
28058624-T-A 25912477-T-A P1_Y2 ***
27390994-T-C 25244847-T-C P1_g3 ***
28058617-T-G 25912470-T-G P1_Y2 ***
28024763-A-T 25878616-A-T P1_Y2 ***
28024746-C-A 25878599-C-A P1_Y2 ***
28024745-C-A 25878598-C-A P1_Y2 ***
28019064-G-A 25872917-G-A P1_Y2 ***
27936869-G-A 25790722-G-A P1_Y2 ***
27921575-G-A 25775428-G-A P1_Y2 ***
27892029-T-A 25745882-T-A P1_Y2 ***
27637391-T-C 25491244-T-C P1_Y2 ***
27547833-C-A 25401686-C-A P1_Y2 ***
27499107-A-G 25352960-A-G P1_Y2 ***
27499105-T-G 25352958-T-G P1_Y2 ***
58843684-A-T 56747187-T-A ***
20434759-T-TAAA 18272873-T-TAAA P5_Dst 24×A***
58846490-T-C 56744381-A-G ***
16344407-C-CTTCTTG 14232527-C-CTTCTTG ***
21953535-CTTTT-C 19791649-CTTTT-C 15×T***
21700595-GAA-G 19538709-GAA-G 17×A***
21454204-CAAAAAA-C 19292318-CAAAAAA-C 18×A***
21148589-C-CAAA 18986703-C-CAAA 30×A***
20742072-C-CTAATTTTA 18580186-C-CTAATTTTA P4_Prx ***
20473370-AAA-TGATGACGATGT 18311484-AAA-TGATGACGATGT P5_Dst ***
20473356-AAT-GAG 18311470-AAT-GAG P5_Dst ***
19252948-C-CAAA 17141068-C-CAAA 13×A***
19206741-T-TAAAAAAA 17094861-T-TAAAAAAA 29×A***
18290815-CAAAAA-C 16178935-CAAAAA-C P6_Prx 20×A***
16305949-G-AA 14194069-G-AA ***
22342934-CTTAGTGGT-TTTACTGGG 20181048-CTTAGTGGT-TTTACTGGG DYZ19 ***
15865946-C-CTTTTTTTTT 13754066-C-CTTTTTTTTT 37×T***
14717293-GG-TT 12605361-GG-TT ***
14604590-C-CTTTT 12492792-C-CTTTT 21×T***
14329736-G-GTTTTTTTT 12209030-G-GTTTTTTTT 17×T***
14172755-T-TAACA 12052049-T-TAACA ***
13489627-CACCACCCA-C 11333951-CACCACCCA-C ***
13486243-TAGAGCA-CAGAGCC 11330567-TAGAGCA-CAGAGCC ***
13467503-GGC-TGG 11311827-GGC-TGG ***
13463604-CGGAT-TGGAG 11307928-CGGAT-TGGAG ***
13463597-GT-AC 11307921-GT-AC ***
13460127-CAAGAGTTACATCAT-GAACAGTCCCTTCAC 11304451-CAAGAGTTACATCAT-GAACAGTCCCTTCAC ***
22342558-TTTAG-CTTAC 20180672-TTTAG-CTTAC DYZ19 ***
22495766-TG-T 20333880-TG-T DYZ19 ***
8119053-G-GTTTTTTTTTTTT 8251012-G-GTTTTTTTTTTTT 16×T***
58842671-GTA-ATT 56748198-TAC-AAT ***
58874619-TATTTT-CTTTTG 56716247-AAAATA-CAAAAG ***
58874609-TCTTT-GATTA 56716258-AAAGA-TAATC ***
58874601-TTTG-ATCC 56716267-CAAA-GGAT ***
58863779-ATCGATTCCATTCTAG-A 56727075-TACTAGAATGGAATCG-T ***
58862002-TC-T 56728866-CG-C ***
58859748-CGATTCCTTTCCATTG-C 56731101-TGGAATCCAATGGAAA-T ***
58859566-CAC-TCG 56731303-GTG-CGA ***
58859563-TA-AG 56731307-TA-CT ***
58855573-AATTA-GATTC 56735294-TAATT-GAATC ***
58852178-CCATTCCGTTCCAATT-C 56738671-TGGAATGAATTGGAAC-T ***
58844605-C-CCATTG 56746261-G-GAATGC ***
58840624-TCCAGGCCT-ACCATGCCA 56750239-AGGCCTGGA-TGGCATGGT ***
22501963-GTTTG-ATTAT 20340077-GTTTG-ATTAT DYZ19 ***
58837668-TTTCCATTCGGTTACA-T 56753179-TGAATGGAATGTAACC-T ***
58831300-CCT-TCA 56759569-AGG-TGA ***
28794961-CGC-GGT 26648814-CGC-GGT ***
27546742-CTTTT-C 25400595-CTTTT-C P1_Y2 19×T***
27127799-CTTTG-GTCTT 24981652-CTTTG-GTCTT P1_g3 ***
26902286-C-CAAAAAA 24756139-C-CAAAAAA P1_r3 34×A***
26902286-C-CAAAAAAAAAAA 24756139-C-CAAAAAAAAAAA P1_r3 34×A***
25800171-TGGG-CAGC 23654024-TGGG-CAGC P1_b3 ***
24462947-TA-CG 22316800-TA-CG ***
23488834-T-TAAAAAAAA 21326948-T-TAAAAAAAA 30×A***
23084704-G-GTTTTTTTTTTT 20922818-G-GTTTTTTTTTTT 19×T***
13256858-G-GTTTTTT 11101182-G-GTTTTTT 18×T***
7485256-CTTTTTT-C 7617215-CTTTTTT-C IR1_L 23×T***
58848324-A-G 56742547-T-C ***
58874681-G-T 56716190-C-A ***
58889883-G-T 56700988-C-A ***
58889880-C-G 56700991-G-C ***
58884330-G-T 56706541-C-A ***
58884142-C-A 56706729-G-T ***
58882549-A-T 56708322-T-A ***
58882548-C-T 56708323-G-A ***
58882543-G-A 56708328-C-T ***
58882542-C-G 56708329-G-C ***
58882539-G-A 56708332-C-T ***
58882524-C-A 56708347-G-T ***
58876709-A-T 56714162-T-A ***
58874678-C-G 56716193-G-C ***
58889901-A-T 56700970-T-A ***
58874594-A-C 56716277-T-G ***
58874588-C-G 56716283-G-C ***
58874559-T-C 56716312-A-G ***
58872503-A-G 56718368-T-C ***
58872301-G-A 56718570-C-T ***
58868718-G-A 56722153-C-T ***
58862019-C-A 56728852-G-T ***
58855620-A-T 56735251-T-A ***
58855612-C-T 56735259-G-A ***
58855595-T-C 56735276-A-G ***
58852227-T-C 56738644-A-G ***
58889897-A-T 56700974-T-A ***
58892614-C-T 56698257-G-A ***
7426513-TT-GC 7558472-TT-GC ***
58912705-C-A 56678166-G-T ***
5400468-C-CTGTTTT 5532427-C-CTGTTTT 19×T***
4487816-GA-G 4619775-GA-G 19×A***
13389650-AGT-A 11233974-AGT-A ***
21084335-G-GTATA 18922449-G-GTATA 8×TA***
4839002-C-CT 4970961-C-CT 16×T***
13884529-C-CA 11763823-C-CA 17×A***
14696023-C-AAA 12584089-C-AAA ***
19054342-C-CT 16942462-C-CT 16×T***
4953820-TTG-T 5085779-TTG-T 16×TG***
58913089-A-G 56677782-T-C ***
58913088-G-A 56677783-C-T ***
58911097-T-A 56679774-A-T ***
58894851-A-G 56696020-T-C ***
58909698-C-T 56681173-G-A ***
58909468-C-G 56681403-G-C ***
58909216-A-T 56681655-T-A ***
58909214-G-T 56681657-C-A ***
58908492-C-T 56682379-G-A ***
58908489-A-C 56682382-T-G ***
58906965-G-C 56683906-C-G ***
58904780-C-G 56686091-G-C ***
58903701-G-C 56687170-C-G ***
58894886-A-G 56695985-T-C ***
58894855-A-C 56696016-T-G ***
22456689-T-G 20294803-T-G DYZ19 ***
20874218-C-T 18712332-C-T P4_Dst ***
22421704-G-A 20259818-G-A DYZ19 ***
24562932-CT-C 22416785-CT-C P3_t2 11×T***
58892295-A-T 56698576-T-A ***
13467945-A-G 11312269-A-G ***
19721332-A-G 17609452-A-G P5_Prx ***
22338197-T-G 20176311-T-G DYZ19 ***
20104256-G-A 17992376-G-A P5_Dst 22×GA***
14719578-T-TA 12607646-T-TA 19×A***
27637398-C-T 25491251-C-T P1_Y2 ***
13748572-G-A 11592896-G-A ***
58881606-CCC-AGA 56709263-GGG-TCT ***
23415304-G-A 21253418-G-A ***
28430195-A-G 26284048-A-G P1_gr2 ***
19513578-ATTT-A 17401698-ATTT-A 20×T***
20420960-T-TA 18259074-T-TA P5_Dst 17×A***
58880294-T-C 56710577-A-G ***
25200559-C-T 23054412-C-T g1 ***
23415308-G-A 21253422-G-A ***
22257002-G-A 20095116-G-A DYZ19 ***
58865689-A-G 56725182-T-C ***
58847786-T-A 56743085-A-T ***
58844827-A-G 56746044-T-C ***
16344402-T-TTCTTCC 14232522-T-TTCTTCC ***
58916580-T-C 56674291-A-G ***
13467580-A-C 11311904-A-C ***
58882596-A-G 56708275-T-C ***
6321441-C-A 6453400-C-A IR3_Dst ***
9551824-A-G 9714215-A-G IR3_Prx ***
9551813-C-T 9714204-C-T IR3_Prx ***
9551812-A-T 9714203-A-T IR3_Prx ***
9343990-G-C 9506381-G-C ***
9302726-C-A 9465117-C-A ***
9207030-G-A 9369421-G-A ***
8811904-C-A 8943863-C-A ***
7473482-G-A 7605441-G-A IR1_L ***
7004440-G-A 7136399-G-A ***
6365646-A-G 6497605-A-G ***
6284654-A-T 6416613-A-T IR3_Dst ***
24550285-G-A 22404138-G-A P3_t2 ***
6236205-T-A 6368164-T-A IR3_Dst ***
6236204-T-A 6368163-T-A IR3_Dst ***
5354745-T-C 5486704-T-C ***
5224777-T-A 5356736-T-A ***
4324030-C-G 4455989-C-G ***
3561527-C-A 3693486-C-A ***
3498982-T-C 3630941-T-C ***
3290391-T-A 3422350-T-A ***
58913042-C-G 56677829-G-C ***
14990496-C-T 12878581-C-T ***
3205858-C-CAAAAA 3337817-C-CAAAAA 15×A***
58830743-G-C 56760128-C-G ***
9750827-C-A 9913218-C-A ***
13467511-A-C 11311835-A-C ***
58831322-TTTCCATTC-ATTCGATGA 56759541-GAATGGAAA-TCATCGAAT ***
22496026-C-T 20334140-C-T DYZ19 ***
22236408-AT-TG 20074522-AT-TG DYZ19 ***
4151936-CA-C 4283895-CA-C 17×A***
58909129-A-C 56681742-T-G ***
20541009-T-G 18379123-T-G P5_Dst ***
20541008-C-T 18379122-C-T P5_Dst ***
20540873-T-A 18378987-T-A P5_Dst ***
20540870-G-A 18378984-G-A P5_Dst ***
13467489-A-C 11311813-A-C ***
14825824-CTTT-C 12713891-CTTT-C 18×T***
13721933-T-A 11566257-T-A ***
22332806-G-A 20170920-G-A DYZ19 ***
58844855-C-A 56746016-G-T ***
22236377-G-C 20074491-G-C DYZ19 ***
22343862-TATG-GATA 20181976-TATG-GATA DYZ19 ***
22236464-CCCACCAAGG-ACCAGTAAGT 20074578-CCCACCAAGG-ACCAGTAAGT DYZ19 ***
14491319-AGT-A ***
58846705-G-C 56744166-C-G ***
22421063-C-T 20259177-C-T DYZ19 ***
58866391-A-T 56724480-T-A ***
13327190-G-A 11171514-G-A ***
58874581-T-G 56716290-A-C ***
13214289-A-ATCT 11058613-A-ATCT 19×T***
58855652-G-C 56735219-C-G ***
18045371-CT-C 15933491-CT-C 18×T***
22231973-A-T 20070087-A-T DYZ19 ***
7201588-T-C 7333547-T-C ***
26479590-C-CA 24333443-C-CA P1_Y1 16×A***
22502112-A-T 20340226-A-T DYZ19 ***
22502092-G-T 20340206-G-T DYZ19 ***
20540861-C-G 18378975-C-G P5_Dst ***
15557124-AATATATATATAT-A 13445244-AATATATATATAT-A 19×AT***
22250523-T-A 20088637-T-A DYZ19 ***
58908541-T-A 56682330-A-T ***
22481930-G-T 20320044-G-T DYZ19 ***
22367432-G-C 20205546-G-C DYZ19 ***
22360164-C-CCCCG 20198278-C-CCCCG DYZ19 ***
13606877-C-CAAAAAAAAAAAAAA 11451201-C-CAAAAAAAAAAAAAA 25×A***
13470295-ATT-GTC 11314619-ATT-GTC ***
58845996-T-G 56744875-A-C ***
22481895-G-A 20320009-G-A DYZ19 ***
13484599-G-A 11328923-G-A ***
13484552-A-T 11328876-A-T ***
5107030-A-AT 5238989-A-AT ***
19644401-C-T 17532521-C-T P5_Prx ***
22342856-G-C 20180970-G-C DYZ19 ***
13129621-G-A 10619107-G-A ***
9676881-A-G 9839272-A-G IR3_Prx ***
10033602-T-G 10195993-T-G ***
22366657-A-T 20204771-A-T DYZ19 ***
20522617-T-G 18360731-T-G P5_Dst ***
20705148-A-C 18543262-A-C P4_Prx ***
20705139-A-C 18543253-A-C P4_Prx ***
20705138-A-C 18543252-A-C P4_Prx ***
20705131-A-T 18543245-A-T P4_Prx ***
20705130-G-T 18543244-G-T P4_Prx ***
20705121-A-C 18543235-A-C P4_Prx ***
20705119-A-C 18543233-A-C P4_Prx ***
20637582-T-G 18475696-T-G P4_Prx ***
20535976-A-G 18374090-A-G P5_Dst ***
20522623-C-A 18360737-C-A P5_Dst ***
20500934-G-C 18339048-G-C P5_Dst ***
20705158-G-A 18543272-G-A P4_Prx ***
19978512-T-A 17866632-T-A P5_Prx ***
19978481-C-A 17866601-C-A P5_Prx ***
19978480-T-G 17866600-T-G P5_Prx ***
19978470-A-T 17866590-A-T P5_Prx ***
19939632-C-G 17827752-C-G P5_Prx ***
19887539-G-T 17775659-G-T P5_Prx ***
19860371-A-T 17748491-A-T P5_Prx ***
19859874-C-T 17747994-C-T P5_Prx ***
19859859-A-T 17747979-A-T P5_Prx ***
19859857-G-T 17747977-G-T P5_Prx ***
20705155-T-C 18543269-T-C P4_Prx ***
9300402-G-C 9462793-G-C ***
19789055-A-T 17677175-A-T P5_Prx ***
22329961-G-A 20168075-G-A DYZ19 ***
22366654-C-A 20204768-C-A DYZ19 ***
22348413-G-T 20186527-G-T DYZ19 ***
22343103-T-A 20181217-T-A DYZ19 ***
22342972-A-C 20181086-A-C DYZ19 ***
22338198-A-G 20176312-A-G DYZ19 ***
22337265-G-T 20175379-G-T DYZ19 ***
22330174-A-T 20168288-A-T DYZ19 ***
22330173-T-C 20168287-T-C DYZ19 ***
22330156-C-T 20168270-C-T DYZ19 ***
22330151-C-A 20168265-C-A DYZ19 ***
22309956-T-A 20148070-T-A DYZ19 ***
20946120-T-A 18784234-T-A P4_Dst ***
22309806-A-T 20147920-A-T DYZ19 ***
22309781-G-T 20147895-G-T DYZ19 ***
22309386-T-C 20147500-T-C DYZ19 ***
22292134-G-A 20130248-G-A DYZ19 ***
22257006-C-T 20095120-C-T DYZ19 ***
22235056-C-T 20073170-C-T DYZ19 ***
22114129-C-A 19952243-C-A ***
21028304-C-G 18866418-C-G P4_Dst ***
20998849-A-G 18836963-A-G P4_Dst ***
20998833-C-G 18836947-C-G P4_Dst ***
19859852-G-T 17747972-G-T P5_Prx ***
19789053-T-A 17677173-T-A P5_Prx ***
13104561-C-T 10594047-C-T ***
13515666-C-A 11359990-C-A ***
16784980-T-C 14673100-T-C ***
15958220-G-A 13846340-G-A ***
15958219-G-C 13846339-G-C ***
14624348-T-A 12512548-T-A ***
14541238-A-C 12429439-A-C ***
13734761-G-C 11579085-G-C ***
13734754-T-G 11579078-T-G ***
13721265-C-A 11565589-C-A ***
13719342-G-T 11563666-G-T ***
13518351-T-C 11362675-T-C ***
13487737-C-A 11332061-C-A ***
18333754-T-G 16221874-T-G P6_Prx ***
13487123-A-T 11331447-A-T ***
13481449-T-C 11325773-T-C ***
13481444-T-A 11325768-T-A ***
13481436-C-T 11325760-C-T ***
13481433-G-T 11325757-G-T ***
13463598-T-C 11307922-T-C ***
13463579-G-A 11307903-G-A ***
13389666-T-C 11233990-T-C ***
13319698-T-C 11164022-T-C ***
13129624-C-T 10619110-C-T ***
17059222-A-G 14947342-A-G ***
18333783-G-A 16221903-G-A P6_Prx ***
19789046-T-A 17677166-T-A P5_Prx ***
19788782-C-T 17676902-C-T P5_Prx ***
19789033-G-A 17677153-G-A P5_Prx ***
19788841-C-A 17676961-C-A P5_Prx ***
19788840-C-T 17676960-C-T P5_Prx ***
19788826-C-A 17676946-C-A P5_Prx ***
19788820-T-C 17676940-T-C P5_Prx ***
19788810-C-G 17676930-C-G P5_Prx ***
19788797-T-C 17676917-T-C P5_Prx ***
19788791-C-G 17676911-C-G P5_Prx ***
19788789-G-A 17676909-G-A P5_Prx ***
19788785-G-A 17676905-G-A P5_Prx ***
19788764-C-T 17676884-C-T P5_Prx ***
19210470-G-A 17098590-G-A ***
19788759-C-T 17676879-C-T P5_Prx ***
19788756-C-A 17676876-C-A P5_Prx ***
19700239-G-T 17588359-G-T P5_Prx ***
19700207-T-A 17588327-T-A P5_Prx ***
19682086-G-T 17570206-G-T P5_Prx ***
19656933-T-G 17545053-T-G P5_Prx ***
19656932-C-T 17545052-C-T P5_Prx ***
19644407-C-T 17532527-C-T P5_Prx ***
19644404-C-T 17532524-C-T P5_Prx ***
19579802-G-A 17467922-G-A P5_Prx ***
58894964-ACATTTGATGCCATC-CCATTTGATGCCATT 56695893-GATGGCATCAAATGT-AATGGCATCAAATGG ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Haplotype Progression

The data below reveals the progression of changes in the haplotype. The bottom row is the haplotype for this man and above him are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are very much a work in progress, and any suggested modifications are appreciated. I think we can use our vast collection of haplotype data to refine these haplotypes. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

DYS393
DYS390
DYS19
DYS391
DYS385
DYS426
DYS388
DYS439
DYS389i
DYS392
DYS389ii
DYS458
DYS459
DYS455
DYS454
DYS447
DYS437
DYS448
DYS449
DYS464
DYS460
Y-GATA-H4
YCAII
DYS456
DYS607
DYS576
DYS570
CDY
DYS442
DYS438
DYS531
DYS578
DYF395S1
DYS590
DYS537
DYS641
DYS472
DYF406S1
DYS511
DYS425
DYS413
DYS557
DYS594
DYS436
DYS490
DYS534
DYS450
DYS444
DYS481
DYS520
DYS446
DYS617
DYS568
DYS487
DYS572
DYS640
DYS492
DYS565
DYS710
DYS485
DYS632
DYS495
DYS540
DYS714
DYS716
DYS717
DYS505
DYS556
DYS549
DYS589
DYS522
DYS494
DYS533
DYS636
DYS575
DYS638
DYS462
DYS452
DYS445
Y-GATA-A10
DYS463
DYS441
Y-GGAAT-1B07
DYS525
DYS712
DYS593
DYS650
DYS532
DYS715
DYS504
DYS513
DYS561
DYS552
DYS726
DYS635
DYS587
DYS643
DYS497
DYS510
DYS434
DYS461
DYS435
P312/S1161324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123315916122626191211131210912121011113012132413101020151913241712152412231810141791211
Fowler1324141011-13121512131329179-109112515182915-16-17-17111019-231715181835-38121212915-158101081091223-23141012121581222201312111311111212

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 2QAKU14754646103001158432476
Used in age calculations14754646103001158432476
Counts of SNPs2819
Variant counts last updated 2017-12-13 11:42:49.



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