Tree Position

R-U106/S21 > Z2265 > Z381/S263 > Z301/S499 > L48 > Z9 > Z30/S271 > Z349 > Z2 > Z7 > Z8 > Z1 > Z344 > A6903 > Y12858 > Exact position not yet finalized.

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
65CCR
9430796-C-T 9593187-C-T FGC29406 Y+
15094691-C-T 12982779-C-T FGC29407 YY+
17901452-C-A 15789572-C-A FGC29413 Y+
22779720-G-A 20617834-G-A FGC29422 Y+
15099542-T-C 12987630-T-C FGC29408 Y*
19428056-A-G 17316176-A-G FGC29417 Y*
22470963-C-T 20309077-C-T FGC29420 DYZ19 *
13329429-G-C 11173753-G-C **
22471304-T-C 20309418-T-C DYZ19 **
13287883-A-G 11132207-A-G **
9939713-T-C 10102104-T-C A13699 **
9945681-G-C 10108072-G-C BZ3032 **
22341478-T-G 20179592-T-G DYZ19 **
22469010-T-C 20307124-T-C Y10824BY4680 DYZ19 **
13404412-A-G 11248736-A-G **
22467880-G-C 20305994-G-C DYZ19 **
22470820-T-G 20308934-T-G FT223125 DYZ19 **
8786431-A-C 8918390-A-C **
13965758-T-C 11845052-T-C **
14112924-G-A 11992218-G-A A16683 **
15665771-C-T 13553891-C-T A11848 **
22468980-G-A 20307094-G-A DYZ19 **
22469107-T-G 20307221-T-G DYZ19 **
22470069-T-G 20308183-T-G BY157047 DYZ19 **
22472617-A-T 20310731-A-T DYZ19 **
22472664-G-A 20310778-G-A BY157051 DYZ19 **
22472666-A-G 20310780-A-G BY155308 DYZ19 **
22472672-G-A 20310786-G-A DYZ19 **
22472778-T-C 20310892-T-C DYZ19 **
22472789-G-A 20310903-G-A DYZ19 **
22266202-T-TTTAG 20104316-T-TTTAG DYZ19 **
22469002-A-AGT 20307116-A-AGT DYZ19 **
13406233-GAAC-G 11250557-GAAC-G ***
22468871-A-G 20306985-A-G BY24571 DYZ19 ***
22468933-G-A 20307047-G-A FT458969 DYZ19 ***
58830963-T-A 56759908-A-T ***
13329418-T-C 11173742-T-C ***
58864072-C-G 56726799-G-C ***
58843776-G-A 56747095-C-T ***
28794961-CGC-GGG 26648814-CGC-GGG ***
58868388-AGTGCATTCCATTCCGTGGCT-A 56722460-GACAGCCACGGAATGGAATGC-G ***
13129615-C-T 10619101-C-T ***
13129616-T-G 10619102-T-G ***
13129622-C-G 10619108-C-G ***
13129623-A-G 10619109-A-G ***
58848499-G-A 56742372-C-T ***
58877061-C-A 56713810-G-T ***
22341240-TAGAGTTTGTTCC-CATTGTGTCCTCG 20179354-TAGAGTTTGTTCC-CATTGTGTCCTCG DYZ19 ***
20025431-T-C 17913551-T-C P5_Prx ***
22268351-T-C 20106465-T-C DYZ19 ***
58841100-T-C 56749771-A-G ***
58908683-G-T 56682188-C-A ***
13470658-CT-GA 11314982-CT-GA ***
22263789-G-T 20101903-G-T DYZ19 ***
13483624-T-A 11327948-T-A ***
13483645-T-A 11327969-T-A ***
13842517-A-G 11721811-A-G ***
58838435-T-A 56752436-A-T ***
22470017-TCC-GCA 20308131-TCC-GCA DYZ19 ***
10104556-N-A 10266947-N-A ***
13122132-T-G 10611618-T-G ***
13122174-G-A 10611660-G-A ***
22250469-ATAA-TTAG 20088583-ATAA-TTAG DYZ19 ***
22256931-GTGG-TTGT 20095045-GTGG-TTGT DYZ19 ***
22234725-G-A 20072839-G-A DYZ19 ***
22308502-C-A 20146616-C-A DYZ19 ***
58881418-G-A 56709453-C-T ***
58823348-ATTCA-GATCT 56767519-TGAAT-AGATC ***
22354954-C-G 20193068-C-G DYZ19 ***
13876452-G-A 11755746-G-A ***
5228372-GTGTG-ATGTT 5360331-GTGTG-ATGTT ***
22309972-TTGTTTG-ATGTGTC 20148086-TTGTTTG-ATGTGTC DYZ19 ***
13435360-ATA-GTC 11279684-ATA-GTC ***
22341694-TCAC-GCAG 20179808-TCAC-GCAG DYZ19 ***
28478036-TAT-GAG 26331889-TAT-GAG ***
22366032-G-C 20204146-G-C DYZ19 ***
22481367-T-C 20319481-T-C DYZ19 ***
22481378-G-A 20319492-G-A DYZ19 ***
10018287-AT-GC 10180678-AT-GC ***
13480528-TATCTCCA-CATCACCT 11324852-TATCTCCA-CATCACCT ***
58895124-T-A 56695747-A-T ***
58903222-G-C 56687649-C-G ***
58833148-G-A 56757723-C-T ***
58833149-A-G 56757722-T-C ***
58857538-C-A 56733333-G-T ***
13725307-C-A 11569631-C-A ***
22360751-C-G 20198865-C-G DYZ19 ***
13287869-A-G 11132193-A-G ***
6123526-A-C 6255485-A-C ***
13256634-A-T 11100958-A-T ***
20535935-C-T 18374049-C-T P5_Dst ***
58844856-G-C 56746015-C-G ***
18447621-G-GTTTTTTTTTTT 16335741-G-GTTTTTTTTTTT P6_Dst 18×T***
4843273-G-A 4975232-G-A ***
22364759-T-A 20202873-T-A DYZ19 ***
22364862-A-G 20202976-A-G DYZ19 ***
22457227-C-CT 20295341-C-CT DYZ19 ***
22273644-C-G 20111758-C-G DYZ19 ***
22328421-T-G 20166535-T-G DYZ19 ***
58890013-T-G 56700858-A-C ***
13725291-G-T 11569615-G-T ***
22360028-G-T 20198142-G-T DYZ19 ***
22360032-T-G 20198146-T-G DYZ19 ***
58833143-A-G 56757728-T-C ***
58882554-G-A 56708317-C-T ***
22322568-A-T 20160682-A-T DYZ19 ***
10092424-G-A 10254815-G-A ***
22223650-A-G 20061764-A-G DYZ19 ***
22344126-G-T 20182240-G-T DYZ19 ***
58844826-G-C 56746045-C-G ***
58909093-C-T 56681778-G-A ***
58909117-T-C 56681754-A-G ***
28587017-ATTTA-GTTTG 26440870-ATTTA-GTTTG ***
13366845-C-T 11211169-C-T ***
58829645-C-A 56761226-G-T ***
58845256-C-A 56745615-G-T ***
58845275-A-C 56745596-T-G ***
58907104-T-C 56683767-A-G ***
58909801-T-C 56681070-A-G ***
22265856-GT-TA 20103970-GT-TA DYZ19 ***
22354955-C-G 20193069-C-G DYZ19 ***
22495902-A-G 20334016-A-G DYZ19 ***
28107486-T-C 25961339-T-C P1_Y2 ***
58840087-T-A 56750784-A-T ***
58840105-A-C 56750766-T-G ***
58847200-G-C 56743671-C-G ***
58864018-A-T 56726853-T-A ***
22354954-CC-GG 20193068-CC-GG DYZ19 ***
58889878-C-T 56700993-G-A ***
22471318-T-G 20309432-T-G DYZ19 ***
58908655-T-A 56682216-A-T ***
13480484-AATC-GATA 11324808-AATC-GATA ***
22332800-T-A 20170914-T-A DYZ19 ***
22420401-G-T 20258515-G-T DYZ19 ***
22420402-G-T 20258516-G-T DYZ19 ***
15336050-GT-AA 13224168-GT-AA ***
22420398-C-CA 20258512-C-CA DYZ19 ***
22420401-GG-TT 20258515-GG-TT DYZ19 ***
22334548-T-G 20172662-T-G DYZ19 ***
22351197-T-G 20189311-T-G DYZ19 ***
22351196-TT-AG 20189310-TT-AG DYZ19 ***
22364840-CTTACTGT-TTTTGTGG 20202954-CTTACTGT-TTTTGTGG DYZ19 ***
9938962-C-G 10101353-C-G ***
23832828-T-C 21670942-T-C ***
58845247-G-T 56745624-C-A ***
58863838-T-A 56727033-A-T ***
58889881-T-C 56700990-A-G ***
22344828-TAATGTAG-AAAGGTA 20182942-TAATGTAG-AAAGGTA DYZ19 ***
9956357-CGCC-TGCA 10118748-CGCC-TGCA ***
22292139-TTCC-CTCT 20130253-TTCC-CTCT DYZ19 ***
22357735-C-G 20195849-C-G DYZ19 ***
58844858-C-T 56746013-G-A ***
58847870-T-C 56743001-A-G ***
22469565-C-T 20307679-C-T ZS2922 DYZ19 ***
13444155-A-T 11288479-A-T ***
22273662-C-A 20111776-C-A DYZ19 ***
13122177-G-T 10611663-G-T ***
4474281-AT-A 4606240-AT-A 9×T***
5366203-A-G 5498162-A-G ***
6502955-G-A 6634914-G-A ***
13331076-A-G 11175400-A-G ***
13366808-T-G 11211132-T-G ***
13371220-A-G 11215544-A-G PF513 ***
13611988-G-T 11456312-G-T 19×T***
15936603-C-G 13824723-C-G ***
22473071-T-A 20311185-T-A BY15758 DYZ19 ***
13122125-A-G 10611611-A-G ***
22248286-A-G 20086400-A-G DYZ19 ***
22248289-A-G 20086403-A-G DYZ19 ***
13122131-CT-TG 10611617-CT-TG ***
22273693-G-C 20111807-G-C DYZ19 ***
58833123-A-C 56757748-T-G ***
58847884-G-C 56742987-C-G ***
22248389-TTC-GTG 20086503-TTC-GTG DYZ19 ***
22268383-TCTTGCTCAA-ACTTCTTCAC 20106497-TCTTGCTCAA-ACTTCTTCAC DYZ19 ***
22273691-CGGTC-AGCTG 20111805-CGGTC-AGCTG DYZ19 ***
58872390-CCGT-C 56718477-TACG-T ***
22300957-GGT-AGG 20139071-GGT-AGG DYZ19 ***
13279938-TGG-CGA 11124262-TGG-CGA ***
22330199-TTCT-GTCC 20168313-TTCT-GTCC DYZ19 ***
58840601-G-C 56750270-C-G ***
22337320-TTT-GTG 20175434-TTT-GTG DYZ19 ***
13122174-GATG-AATT 10611660-GATG-AATT ***
13456019-GATTCCATTCCATTCC-G 11300343-GATTCCATTCCATTCC-G 11×ATTCC***
13254488-GGGC-AGGT 11098812-GGGC-AGGT ***
10010694-G-C 10173085-G-C ***
10010717-T-C 10173108-T-C ***
10060227-T-C 10222618-T-C ***
22468424-C-G 20306538-C-G Z24922 DYZ19 ***
22469121-C-G 20307235-C-G FT459008 DYZ19 ***
22469801-A-G 20307915-A-G BY12495 DYZ19 ***
22471055-T-C 20309169-T-C BY2038 DYZ19 ***
22273663-A-G 20111777-A-G DYZ19 ***
22469572-G-T 20307686-G-T BY48622 DYZ19 ***
27637124-A-G 25490977-A-G P1_Y2 ***
28819205-G-T 26673058-G-T ***
19411994-GAA-G 17300114-GAA-G ***
22307195-G-C 20145309-G-C DYZ19 ***
22322591-C-G 20160705-C-G DYZ19 ***
58908690-G-C 56682181-C-G ***
22472524-C-G 20310638-C-G DYZ19 ***
22472535-C-G 20310649-C-G DYZ19 ***
22469442-G-T 20307556-G-T FGC81712 DYZ19 ***
13110016-G-A 10599502-G-A ***
22344085-T-C 20182199-T-C DYZ19 ***
58855073-A-C 56735798-T-G ***
4817267-CCTA-AATAG 4949226-CCTA-AATAG ***
5241238-CTTTT-C 5373197-CTTTT-C 15×T***
58917655-TCN-T ***
22469150-G-A 20307264-G-A BY16490 DYZ19 ***
22365824-G-T 20203938-G-T DYZ19 ***
13458708-TTCCAC-T 11303032-TTCCAC-T ***
13484470-T-G 11328794-T-G ***
58885391-T-C 56705480-A-G ***
58885407-C-A 56705464-G-T ***
22292283-T-G 20130397-T-G DYZ19 ***
13122104-A-G 10611590-A-G ***
58909763-T-A 56681108-A-T ***
22292307-AT-GC 20130421-AT-GC DYZ19 ***
22337374-G-C 20175488-G-C DYZ19 ***
22470043-A-G 20308157-A-G BY2037 DYZ19 ***
9945645-T-A 10108036-T-A ***
15109480-C-T 12997567-C-T ***
22257128-A-G 20095242-A-G DYZ19 ***
13480116-C-A 11324440-C-A ***
22471051-G-A 20309165-G-A FGC29171 DYZ19 ***
13480113-C-G 11324437-C-G ***
19489139-G-A 17377259-G-A ***
2663921-T-A 2795880-T-A ***
2877450-T-C 3009409-T-C ***
3177311-G-A 3309270-G-A ***
3271047-C-A 3403006-C-A ***
3558247-A-T 3690206-A-T ***
3591283-T-C 3723242-T-C ***
3597874-A-G 3729833-A-G ***
4260569-C-T 4392528-C-T ***
4817276-A-G 4949235-A-G FGC39139 ***
4887543-G-A 5019502-G-A ***
5044031-A-G 5175990-A-G ***
5355974-T-A 5487933-T-A ***
5528246-G-A 5660205-G-A ***
5743265-T-C 5875224-T-C ***
6135802-T-C 6267761-T-C ***
6135803-G-A 6267762-G-A ***
6135813-A-G 6267772-A-G ***
6135849-A-G 6267808-A-G ***
6326263-C-T 6458222-C-T IR3_Dst ***
6489243-T-C 6621202-T-C ***
6995127-C-A 7127086-C-A 13×A***
7098758-C-T 7230717-C-T ***
8731971-C-T 8863930-C-T ***
9342864-G-A 9505255-G-A ***
9342867-G-T 9505258-G-T ***
9350173-A-C 9512564-A-C ***
9570188-A-G 9732579-A-G IR3_Prx ***
9570208-C-T 9732599-C-T IR3_Prx ***
10060162-T-C 10222553-T-C ***
10084450-G-T 10246841-G-T ***
10091346-C-T 10253737-C-T ***
10091347-A-G 10253738-A-G ***
10091351-C-T 10253742-C-T ***
10092418-T-C 10254809-T-C ***
13129588-A-G 10619074-A-G ***
13407357-G-A 11251681-G-A ***
13476008-G-C 11320332-G-C ***
13479555-C-T 11323879-C-T ***
13480550-A-G 11324874-A-G ***
13531752-C-T 11376076-C-T ***
13576317-G-A 11420641-G-A ***
13695401-T-C 11539725-T-C ***
13876062-T-C 11755356-T-C ***
13963874-G-T 11843168-G-T ***
14435460-T-C 12314733-T-C ***
14533047-C-T 12421248-C-T ***
15243876-T-C 13131962-T-C ***
16096802-T-C 13984922-T-C FT451986 ***
17024894-G-A 14913014-G-A ***
17349378-C-A 15237498-C-A 52×A***
18340642-A-T 16228762-A-T P6_Prx ***
18409052-C-T 16297172-C-T P6_Gap ***
19320223-A-G 17208343-A-G ***
19612074-T-A 17500194-T-A P5_Prx ***
19612075-C-A 17500195-C-A P5_Prx ***
19612077-C-T 17500197-C-T P5_Prx ***
19612078-G-A 17500198-G-A P5_Prx ***
19657169-T-G 17545289-T-G P5_Prx ***
19754215-G-T 17642335-G-T P5_Prx ***
19921919-G-A 17810039-G-A P5_Prx ***
19950208-G-C 17838328-G-C P5_Prx ***
19950217-T-A 17838337-T-A P5_Prx ***
19950232-A-G 17838352-A-G P5_Prx ***
19950234-T-G 17838354-T-G P5_Prx ***
20237584-A-T 18075698-A-T P5_Dst ***
20946313-A-C 18784427-A-C P4_Dst ***
21055410-A-G 18893524-A-G ***
21376437-A-T 19214551-A-T ***
21664853-G-A 19502967-G-A A14524 ***
21852720-C-A 19690834-C-A ***
22036511-T-A 19874625-T-A ***
22111472-G-T 19949586-G-T ***
22129855-A-T 19967969-A-T ***
22223795-T-C 20061909-T-C DYZ19 ***
22226976-A-T 20065090-A-T DYZ19 ***
22226979-A-G 20065093-A-G DYZ19 ***
22227002-T-G 20065116-T-G DYZ19 ***
22234724-A-G 20072838-A-G DYZ19 ***
22234727-T-C 20072841-T-C DYZ19 ***
22248504-C-A 20086618-C-A DYZ19 ***
22292255-C-G 20130369-C-G DYZ19 ***
22292328-A-C 20130442-A-C DYZ19 ***
22297091-C-T 20135205-C-T DYZ19 ***
22308406-G-A 20146520-G-A DYZ19 ***
22309376-G-T 20147490-G-T DYZ19 ***
22311268-G-T 20149382-G-T DYZ19 ***
22328424-A-C 20166538-A-C DYZ19 ***
22343813-G-T 20181927-G-T DYZ19 ***
22351199-C-T 20189313-C-T DYZ19 ***
22357311-G-T 20195425-G-T DYZ19 ***
22357314-C-T 20195428-C-T DYZ19 ***
22357733-C-G 20195847-C-G DYZ19 ***
22360003-G-C 20198117-G-C DYZ19 ***
22365939-C-T 20204053-C-T DYZ19 ***
22366990-G-A 20205104-G-A DYZ19 ***
22366992-T-A 20205106-T-A DYZ19 ***
22421279-T-A 20259393-T-A DYZ19 ***
22433354-T-A 20271468-T-A DYZ19 ***
22467739-C-G 20305853-C-G DYZ19 ***
22467772-G-T 20305886-G-T BY160889 DYZ19 ***
22467788-C-T 20305902-C-T BY160891 DYZ19 ***
22467821-A-G 20305935-A-G DYZ19 ***
22468401-A-G 20306515-A-G DYZ19 ***
22468879-A-T 20306993-A-T BY222133 DYZ19 ***
22469113-A-T 20307227-A-T BY52987 DYZ19 ***
22469163-C-A 20307277-C-A DYZ19 ***
22469744-A-G 20307858-A-G DYZ19 ***
22469756-T-C 20307870-T-C DYZ19 ***
22470055-C-T 20308169-C-T BY25112 DYZ19 ***
22470064-C-G 20308178-C-G DYZ19 ***
22470585-T-A 20308699-T-A DYZ19 ***
22470586-G-A 20308700-G-A DYZ19 ***
22471309-C-A 20309423-C-A DYZ19 ***
22471537-G-A 20309651-G-A BY35064 DYZ19 ***
22472453-T-A 20310567-T-A DYZ19 ***
22472469-G-A 20310583-G-A DYZ19 ***
22472493-A-T 20310607-A-T BY44735 DYZ19 ***
22472548-G-A 20310662-G-A DYZ19 ***
22472552-T-A 20310666-T-A DYZ19 ***
22473079-C-G 20311193-C-G DYZ19 ***
22473088-A-C 20311202-A-C BY222848 DYZ19 ***
22473110-C-G 20311224-C-G BY23282 DYZ19 ***
22473118-T-A 20311232-T-A DYZ19 ***
22473358-A-G 20311472-A-G FGC59981 DYZ19 ***
22491576-T-G 20329690-T-G DYZ19 ***
22499849-C-T 20337963-C-T DYZ19 ***
22504251-G-T 20342365-G-T DYZ19 ***
22504309-T-A 20342423-T-A DYZ19 ***
23713777-T-C 21551891-T-C ***
23713786-G-A 21551900-G-A ***
24539749-T-C 22393602-T-C P3_t2 ***
24618774-A-T 22472627-A-T P3_t2 ***
24618781-G-T 22472634-G-T P3_t2 ***
24618785-T-C 22472638-T-C P3_t2 ***
26924574-G-A 24778427-G-A P1_r3 ***
27161910-C-T 25015763-C-T P1_g3 ***
27281798-G-A 25135651-G-A P1_g3 ***
27281809-T-C 25135662-T-C P1_g3 ***
27457318-C-G 25311171-C-G P1_Y2 ***
27480604-C-G 25334457-C-G P1_Y2 ***
27482803-C-T 25336656-C-T P1_Y2 ***
27589444-A-G 25443297-A-G P1_Y2 ***
27589521-T-C 25443374-T-C P1_Y2 ***
27589536-G-A 25443389-G-A P1_Y2 ***
27589538-T-A 25443391-T-A P1_Y2 ***
27659685-T-C 25513538-T-C P1_Y2 ***
27712839-T-A 25566692-T-A P1_Y2 ***
27712841-T-G 25566694-T-G P1_Y2 ***
27712842-A-C 25566695-A-C P1_Y2 ***
28041228-G-T 25895081-G-T P1_Y2 ***
28041270-A-C 25895123-A-C P1_Y2 ***
28041305-G-C 25895158-G-C P1_Y2 ***
28041320-T-C 25895173-T-C P1_Y2 ***
28041321-A-C 25895174-A-C P1_Y2 ***
58823526-G-C 56767345-C-G ***
58823537-T-A 56767334-A-T ***
58823541-A-C 56767330-T-G ***
58829049-G-T 56761822-C-A ***
58833154-T-A 56757717-A-T ***
58833158-C-T 56757713-G-A ***
58840092-T-A 56750779-A-T ***
58843528-T-A 56747343-A-T ***
58843842-G-T 56747029-C-A ***
58844808-G-T 56746063-C-A ***
58844811-T-C 56746060-A-G ***
58844821-T-C 56746050-A-G ***
58846829-C-T 56744042-G-A ***
58855422-C-G 56735449-G-C ***
58855428-G-C 56735443-C-G ***
58855432-A-G 56735439-T-C ***
58857532-G-T 56733339-C-A ***
58857562-G-C 56733309-C-G ***
58863832-T-C 56727039-A-G ***
58867420-C-T 56723451-G-A ***
58870596-C-G 56720275-G-C ***
58881422-G-C 56709449-C-G ***
58885398-C-T 56705473-G-A ***
58892570-C-A 56698301-G-T ***
58908674-A-C 56682197-T-G ***
58908696-A-T 56682175-T-A ***
58908701-A-T 56682170-T-A ***
58909099-C-G 56681772-G-C ***
58909783-T-A 56681088-A-T ***
58916150-C-T 56674721-G-A ***
58916517-C-A 56674354-G-T ***
13487272-CT-GG 11331596-CT-GG ***
10010730-GTC-G 10173121-GTC-G ***
2840099-C-CAAAAA 2972058-C-CAAAAA 20×A***
5285248-TA-T 5417207-TA-T ***
5903661-T-TA 6035620-T-TA ***
6135802-TG-CA 6267761-TG-CA ***
6135829-TA-CG 6267788-TA-CG ***
6135842-AGGAAA-GGGC 6267801-AGGAAA-GGGC ***
7009187-CTTTTTTT-C 7141146-CTTTTTTT-C 19×T***
7545015-G-GA 7676974-G-GA ***
8628154-CTTTTT-C 8760113-CTTTTT-C 16×T***
9204113-TC-GA 9366504-TC-GA ***
9301401-CTA-TAG 9463792-CTA-TAG ***
9350169-GCATA-CGATC 9512560-GCATA-CGATC ***
9732895-C-CAAAAA 9895286-C-CAAAAA IR3_Prx 20×A***
9952727-AAATA-TATTT 10115118-AAATA-TATTT ***
10010715-GCTG-TCCA 10173106-GCTG-TCCA ***
10031930-CGGCA-GGGAG 10194321-CGGCA-GGGAG ***
10084313-AA-GG 10246704-AA-GG ***
10084452-GGTC-AGAA 10246843-GGTC-AGAA ***
13129586-GTA-TTG 10619072-GTA-TTG ***
13140032-A-AC 10629518-A-AC ***
13140035-TGAG-CACTCCA 10629521-TGAG-CACTCCA ***
13140074-GAGTGCGTGTG-CATTCC 10629560-GAGTGCGTGTG-CATTCC ***
13143892-CACCAA-TTCCAT 10633378-CACCAA-TTCCAT ***
13331100-CA-GG 11175424-CA-GG ***
13475998-AGCAAT-GACAAG 11320322-AGCAAT-GACAAG ***
13483081-AGTTAAAAC-TGTCACAAA 11327405-AGTTAAAAC-TGTCACAAA ***
13483100-GCAGGGCCTAGATAAA-ACAAATCCCAGAAAAT 11327424-GCAGGGCCTAGATAAA-ACAAATCCCAGAAAAT ***
13723626-CTAC-ATAT 11567950-CTAC-ATAT ***
13725285-TG-CA 11569609-TG-CA ***
13725297-GAT-AAA 11569621-GAT-AAA ***
13817193-GAATAGAATGGAC-TAATCGAGTGAAA 11696487-GAATAGAATGGAC-TAATCGAGTGAAA ***
14501606-TA-T 12389811-TA-T ***
14613459-C-CTTTTT 12501657-C-CTTTTT 26×T***
14704484-ATATAATAATT-A 12592550-ATATAATAATT-A ***
14754067-C-CCCCCT 12642136-C-CCCCCT 27×T***
15358761-G-GAAAAAAA 13246880-G-GAAAAAA 26×A***
15366020-AG-A 13254140-AG-A ***
16063227-CT-TC 13951347-CT-TC ***
18608340-AT-A 16496460-AT-A 9×T***
20004701-A-ATAG 17892821-A-ATAG P5_Prx ***
20004703-CA-C 17892823-CA-C P5_Prx ***
20326007-C-CTTTTTTTTTTTTT 18164121-C-CTTTTTTTTTTTTT P5_Dst 29×T***
22234722-GCAGTT-CCGATC 20072836-GCAGTT-CCGATC DYZ19 ***
22273660-GTCA-CTAG 20111774-GTCA-CTAG DYZ19 ***
22292181-TGCT-CGCG 20130295-TGCT-CGCG DYZ19 ***
22292190-CA-GC 20130304-CA-GC DYZ19 ***
22292202-AA-GT 20130316-AA-GT DYZ19 ***
22308398-TGTTCT-AGATCG 20146512-TGTTCT-AGATCG DYZ19 ***
22322547-AC-TA 20160661-AC-TA DYZ19 ***
22337310-AGCAGTT-GTCATTTA 20175424-AGCAGTT-GTCATTTA DYZ19 ***
22337345-GTGA-CAGT 20175459-GTGA-CAGT DYZ19 ***
22344357-T-GATC 20182471-T-GATC DYZ19 ***
22344872-ACTC-GTTT 20182986-ACTC-GTTT DYZ19 ***
22355312-AGAAT-A 20193426-AGAAT-A DYZ19 ***
22355332-TAC-AGT 20193446-TAC-AGT DYZ19 ***
22355349-CATA-TACT 20193463-CATA-TACT DYZ19 ***
22355376-GG-TT 20193490-GG-TT DYZ19 ***
22357303-GTGG-AT 20195417-GTGG-AT DYZ19 ***
22360158-T-TCCGA 20198272-T-TCCGA DYZ19 ***
22365822-AAGAAC-TTTAAT 20203936-AAGAAC-TTTAAT DYZ19 ***
22421401-T-TTAA 20259515-T-TTAA DYZ19 ***
22467808-GCTCCAGT-CCTGCAGA 20305922-GCTCCAGT-CCTGCAGA DYZ19 ***
22468414-GTAG-CTCA 20306528-GTAG-CTCA DYZ19 ***
22468940-TAG-ACT 20307054-TAG-ACT DYZ19 ***
22469107-TTTCCTA-GTTCCTT 20307221-TTTCCTA-GTTCCTT DYZ19 ***
22469735-GCTTT-CCCTC 20307849-GCTTT-CCCTC DYZ19 ***
22469767-ACAGT-GCAGG 20307881-ACAGT-GCAGG DYZ19 ***
22470949-TGACTG-T 20309063-TGACTG-T DYZ19 ***
22470958-CA-AAG 20309072-CA-AAG DYZ19 ***
22471055-TTTAAG-CTTTGT 20309169-TTTAAG-CTTTGT DYZ19 ***
22471309-CT-AC 20309423-CT-AC DYZ19 ***
22472453-TGT-AGG 20310567-TGT-AGG DYZ19 ***
22472548-GACCTTAG-AACCATAC 20310662-GACCTTAG-AACCATAC DYZ19 ***
22472664-GAA-AAG 20310778-GAA-AAG DYZ19 ***
22473380-GACACTTTCA-CGCAGGTTCG 20311494-GACACTTTCA-CGCAGGTTCG DYZ19 ***
24264513-CTTTTT-C 22118366-CTTTTT-C P3_b1 18×T***
24386959-TCT-C 22240812-TCT-C ***
24388278-CCT-AGG 22242131-CCT-AGG ***
24618781-GGTGT-TGTGC 22472634-GGTGT-TGTGC P3_t2 ***
26124427-C-CAAAAAAAAA 23978280-C-CAAAAAAAAA P1_Y1 31×A***
27318716-TG-CT 25172569-TG-CT P1_g3 ***
27589506-CTTAT-ATTAA 25443359-CTTAT-ATTAA P1_Y2 ***
27589527-CCATTT-TTACAC 25443380-CCATTT-TTACAC P1_Y2 ***
27699703-TATATG-CACACA 25553556-TATATG-CACACA P1_Y2 ***
27704155-AGACACAG-GGACACAACAA 25558008-AGACACAG-GGACACAACAA P1_Y2 ***
27712839-TTTA-ATGC 25566692-TTTA-ATGC P1_Y2 ***
28107477-TTAAG-T 25961330-TTAAG-T P1_Y2 ***
58819362-GAA-G 56771506-ATT-A ***
58823520-GT-CC 56767350-AC-GG ***
58829060-GTTCG-ATTCC 56761807-CGAAC-GGAAT ***
58833134-GTGCT-ATTCC 56757733-AGCAC-GGAAT ***
58833162-TAA-CAC 56757707-TTA-GTG ***
58844026-A-ATTCCATTCC 56746842-A-AAAGGAATGG ***
58847214-CCAGC-GCATT 56743653-GCTGG-AATGC ***
58867446-GATTC-CATTT 56723421-GAATC-AAATG ***
58872395-CGA-C 56718473-ATC-A ***
58889913-CTCT-GTTG 56700955-AGAG-CAAC ***
58903698-ATTG-TTTC 56687170-CAAT-GAAA ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.