Dunn
FGC: 65CCR, FTDNA: 119710Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FGC 65CCR |
---|---|---|---|---|---|---|---|---|
9430796-C-T | 9593187-C-T | FGC29406 | Y | + | ||||
15094691-C-T | 12982779-C-T | FGC29407 | Y | Y | + | |||
17901452-C-A | 15789572-C-A | FGC29413 | Y | + | ||||
22779720-G-A | 20617834-G-A | FGC29422 | Y | + | ||||
15099542-T-C | 12987630-T-C | FGC29408 | Y | * | ||||
19428056-A-G | 17316176-A-G | FGC29417 | Y | * | ||||
22470963-C-T | 20309077-C-T | FGC29420 | DYZ19 | * | ||||
13329429-G-C | 11173753-G-C | ** | ||||||
22471304-T-C | 20309418-T-C | DYZ19 | ** | |||||
13287883-A-G | 11132207-A-G | ** | ||||||
9939713-T-C | 10102104-T-C | A13699 | ** | |||||
9945681-G-C | 10108072-G-C | BZ3032 | ** | |||||
22341478-T-G | 20179592-T-G | DYZ19 | ** | |||||
22469010-T-C | 20307124-T-C | Y10824 | BY4680 | DYZ19 | ** | |||
13404412-A-G | 11248736-A-G | ** | ||||||
22467880-G-C | 20305994-G-C | DYZ19 | ** | |||||
22470820-T-G | 20308934-T-G | FT223125 | DYZ19 | ** | ||||
8786431-A-C | 8918390-A-C | ** | ||||||
13965758-T-C | 11845052-T-C | ** | ||||||
14112924-G-A | 11992218-G-A | A16683 | ** | |||||
15665771-C-T | 13553891-C-T | A11848 | ** | |||||
22468980-G-A | 20307094-G-A | DYZ19 | ** | |||||
22469107-T-G | 20307221-T-G | DYZ19 | ** | |||||
22470069-T-G | 20308183-T-G | BY157047 | DYZ19 | ** | ||||
22472617-A-T | 20310731-A-T | DYZ19 | ** | |||||
22472664-G-A | 20310778-G-A | BY157051 | DYZ19 | ** | ||||
22472666-A-G | 20310780-A-G | BY155308 | DYZ19 | ** | ||||
22472672-G-A | 20310786-G-A | DYZ19 | ** | |||||
22472778-T-C | 20310892-T-C | DYZ19 | ** | |||||
22472789-G-A | 20310903-G-A | DYZ19 | ** | |||||
22266202-T-TTTAG | 20104316-T-TTTAG | DYZ19 | ** | |||||
22469002-A-AGT | 20307116-A-AGT | DYZ19 | ** | |||||
13406233-GAAC-G | 11250557-GAAC-G | *** | ||||||
22468871-A-G | 20306985-A-G | BY24571 | DYZ19 | *** | ||||
22468933-G-A | 20307047-G-A | FT458969 | DYZ19 | *** | ||||
58830963-T-A | 56759908-A-T | *** | ||||||
13329418-T-C | 11173742-T-C | *** | ||||||
58864072-C-G | 56726799-G-C | *** | ||||||
58843776-G-A | 56747095-C-T | *** | ||||||
28794961-CGC-GGG | 26648814-CGC-GGG | *** | ||||||
58868388-AGTGCATTCCATTCCGTGGCT-A | 56722460-GACAGCCACGGAATGGAATGC-G | *** | ||||||
13129615-C-T | 10619101-C-T | *** | ||||||
13129616-T-G | 10619102-T-G | *** | ||||||
13129622-C-G | 10619108-C-G | *** | ||||||
13129623-A-G | 10619109-A-G | *** | ||||||
58848499-G-A | 56742372-C-T | *** | ||||||
58877061-C-A | 56713810-G-T | *** | ||||||
22341240-TAGAGTTTGTTCC-CATTGTGTCCTCG | 20179354-TAGAGTTTGTTCC-CATTGTGTCCTCG | DYZ19 | *** | |||||
20025431-T-C | 17913551-T-C | P5_Prx | *** | |||||
22268351-T-C | 20106465-T-C | DYZ19 | *** | |||||
58841100-T-C | 56749771-A-G | *** | ||||||
58908683-G-T | 56682188-C-A | *** | ||||||
13470658-CT-GA | 11314982-CT-GA | *** | ||||||
22263789-G-T | 20101903-G-T | DYZ19 | *** | |||||
13483624-T-A | 11327948-T-A | *** | ||||||
13483645-T-A | 11327969-T-A | *** | ||||||
13842517-A-G | 11721811-A-G | *** | ||||||
58838435-T-A | 56752436-A-T | *** | ||||||
22470017-TCC-GCA | 20308131-TCC-GCA | DYZ19 | *** | |||||
10104556-N-A | 10266947-N-A | *** | ||||||
13122132-T-G | 10611618-T-G | *** | ||||||
13122174-G-A | 10611660-G-A | *** | ||||||
22250469-ATAA-TTAG | 20088583-ATAA-TTAG | DYZ19 | *** | |||||
22256931-GTGG-TTGT | 20095045-GTGG-TTGT | DYZ19 | *** | |||||
22234725-G-A | 20072839-G-A | DYZ19 | *** | |||||
22308502-C-A | 20146616-C-A | DYZ19 | *** | |||||
58881418-G-A | 56709453-C-T | *** | ||||||
58823348-ATTCA-GATCT | 56767519-TGAAT-AGATC | *** | ||||||
22354954-C-G | 20193068-C-G | DYZ19 | *** | |||||
13876452-G-A | 11755746-G-A | *** | ||||||
5228372-GTGTG-ATGTT | 5360331-GTGTG-ATGTT | *** | ||||||
22309972-TTGTTTG-ATGTGTC | 20148086-TTGTTTG-ATGTGTC | DYZ19 | *** | |||||
13435360-ATA-GTC | 11279684-ATA-GTC | *** | ||||||
22341694-TCAC-GCAG | 20179808-TCAC-GCAG | DYZ19 | *** | |||||
28478036-TAT-GAG | 26331889-TAT-GAG | *** | ||||||
22366032-G-C | 20204146-G-C | DYZ19 | *** | |||||
22481367-T-C | 20319481-T-C | DYZ19 | *** | |||||
22481378-G-A | 20319492-G-A | DYZ19 | *** | |||||
10018287-AT-GC | 10180678-AT-GC | *** | ||||||
13480528-TATCTCCA-CATCACCT | 11324852-TATCTCCA-CATCACCT | *** | ||||||
58895124-T-A | 56695747-A-T | *** | ||||||
58903222-G-C | 56687649-C-G | *** | ||||||
58833148-G-A | 56757723-C-T | *** | ||||||
58833149-A-G | 56757722-T-C | *** | ||||||
58857538-C-A | 56733333-G-T | *** | ||||||
13725307-C-A | 11569631-C-A | *** | ||||||
22360751-C-G | 20198865-C-G | DYZ19 | *** | |||||
13287869-A-G | 11132193-A-G | *** | ||||||
6123526-A-C | 6255485-A-C | *** | ||||||
13256634-A-T | 11100958-A-T | *** | ||||||
20535935-C-T | 18374049-C-T | P5_Dst | *** | |||||
58844856-G-C | 56746015-C-G | *** | ||||||
18447621-G-GTTTTTTTTTTT | 16335741-G-GTTTTTTTTTTT | P6_Dst | 18×T | *** | ||||
4843273-G-A | 4975232-G-A | *** | ||||||
22364759-T-A | 20202873-T-A | DYZ19 | *** | |||||
22364862-A-G | 20202976-A-G | DYZ19 | *** | |||||
22457227-C-CT | 20295341-C-CT | DYZ19 | *** | |||||
22273644-C-G | 20111758-C-G | DYZ19 | *** | |||||
22328421-T-G | 20166535-T-G | DYZ19 | *** | |||||
58890013-T-G | 56700858-A-C | *** | ||||||
13725291-G-T | 11569615-G-T | *** | ||||||
22360028-G-T | 20198142-G-T | DYZ19 | *** | |||||
22360032-T-G | 20198146-T-G | DYZ19 | *** | |||||
58833143-A-G | 56757728-T-C | *** | ||||||
58882554-G-A | 56708317-C-T | *** | ||||||
22322568-A-T | 20160682-A-T | DYZ19 | *** | |||||
10092424-G-A | 10254815-G-A | *** | ||||||
22223650-A-G | 20061764-A-G | DYZ19 | *** | |||||
22344126-G-T | 20182240-G-T | DYZ19 | *** | |||||
58844826-G-C | 56746045-C-G | *** | ||||||
58909093-C-T | 56681778-G-A | *** | ||||||
58909117-T-C | 56681754-A-G | *** | ||||||
28587017-ATTTA-GTTTG | 26440870-ATTTA-GTTTG | *** | ||||||
13366845-C-T | 11211169-C-T | *** | ||||||
58829645-C-A | 56761226-G-T | *** | ||||||
58845256-C-A | 56745615-G-T | *** | ||||||
58845275-A-C | 56745596-T-G | *** | ||||||
58907104-T-C | 56683767-A-G | *** | ||||||
58909801-T-C | 56681070-A-G | *** | ||||||
22265856-GT-TA | 20103970-GT-TA | DYZ19 | *** | |||||
22354955-C-G | 20193069-C-G | DYZ19 | *** | |||||
22495902-A-G | 20334016-A-G | DYZ19 | *** | |||||
28107486-T-C | 25961339-T-C | P1_Y2 | *** | |||||
58840087-T-A | 56750784-A-T | *** | ||||||
58840105-A-C | 56750766-T-G | *** | ||||||
58847200-G-C | 56743671-C-G | *** | ||||||
58864018-A-T | 56726853-T-A | *** | ||||||
22354954-CC-GG | 20193068-CC-GG | DYZ19 | *** | |||||
58889878-C-T | 56700993-G-A | *** | ||||||
22471318-T-G | 20309432-T-G | DYZ19 | *** | |||||
58908655-T-A | 56682216-A-T | *** | ||||||
13480484-AATC-GATA | 11324808-AATC-GATA | *** | ||||||
22332800-T-A | 20170914-T-A | DYZ19 | *** | |||||
22420401-G-T | 20258515-G-T | DYZ19 | *** | |||||
22420402-G-T | 20258516-G-T | DYZ19 | *** | |||||
15336050-GT-AA | 13224168-GT-AA | *** | ||||||
22420398-C-CA | 20258512-C-CA | DYZ19 | *** | |||||
22420401-GG-TT | 20258515-GG-TT | DYZ19 | *** | |||||
22334548-T-G | 20172662-T-G | DYZ19 | *** | |||||
22351197-T-G | 20189311-T-G | DYZ19 | *** | |||||
22351196-TT-AG | 20189310-TT-AG | DYZ19 | *** | |||||
22364840-CTTACTGT-TTTTGTGG | 20202954-CTTACTGT-TTTTGTGG | DYZ19 | *** | |||||
9938962-C-G | 10101353-C-G | *** | ||||||
23832828-T-C | 21670942-T-C | *** | ||||||
58845247-G-T | 56745624-C-A | *** | ||||||
58863838-T-A | 56727033-A-T | *** | ||||||
58889881-T-C | 56700990-A-G | *** | ||||||
22344828-TAATGTAG-AAAGGTA | 20182942-TAATGTAG-AAAGGTA | DYZ19 | *** | |||||
9956357-CGCC-TGCA | 10118748-CGCC-TGCA | *** | ||||||
22292139-TTCC-CTCT | 20130253-TTCC-CTCT | DYZ19 | *** | |||||
22357735-C-G | 20195849-C-G | DYZ19 | *** | |||||
58844858-C-T | 56746013-G-A | *** | ||||||
58847870-T-C | 56743001-A-G | *** | ||||||
22469565-C-T | 20307679-C-T | ZS2922 | DYZ19 | *** | ||||
13444155-A-T | 11288479-A-T | *** | ||||||
22273662-C-A | 20111776-C-A | DYZ19 | *** | |||||
13122177-G-T | 10611663-G-T | *** | ||||||
4474281-AT-A | 4606240-AT-A | 9×T | *** | |||||
5366203-A-G | 5498162-A-G | *** | ||||||
6502955-G-A | 6634914-G-A | *** | ||||||
13331076-A-G | 11175400-A-G | *** | ||||||
13366808-T-G | 11211132-T-G | *** | ||||||
13371220-A-G | 11215544-A-G | PF513 | *** | |||||
13611988-G-T | 11456312-G-T | 19×T | *** | |||||
15936603-C-G | 13824723-C-G | *** | ||||||
22473071-T-A | 20311185-T-A | BY15758 | DYZ19 | *** | ||||
13122125-A-G | 10611611-A-G | *** | ||||||
22248286-A-G | 20086400-A-G | DYZ19 | *** | |||||
22248289-A-G | 20086403-A-G | DYZ19 | *** | |||||
13122131-CT-TG | 10611617-CT-TG | *** | ||||||
22273693-G-C | 20111807-G-C | DYZ19 | *** | |||||
58833123-A-C | 56757748-T-G | *** | ||||||
58847884-G-C | 56742987-C-G | *** | ||||||
22248389-TTC-GTG | 20086503-TTC-GTG | DYZ19 | *** | |||||
22268383-TCTTGCTCAA-ACTTCTTCAC | 20106497-TCTTGCTCAA-ACTTCTTCAC | DYZ19 | *** | |||||
22273691-CGGTC-AGCTG | 20111805-CGGTC-AGCTG | DYZ19 | *** | |||||
58872390-CCGT-C | 56718477-TACG-T | *** | ||||||
22300957-GGT-AGG | 20139071-GGT-AGG | DYZ19 | *** | |||||
13279938-TGG-CGA | 11124262-TGG-CGA | *** | ||||||
22330199-TTCT-GTCC | 20168313-TTCT-GTCC | DYZ19 | *** | |||||
58840601-G-C | 56750270-C-G | *** | ||||||
22337320-TTT-GTG | 20175434-TTT-GTG | DYZ19 | *** | |||||
13122174-GATG-AATT | 10611660-GATG-AATT | *** | ||||||
13456019-GATTCCATTCCATTCC-G | 11300343-GATTCCATTCCATTCC-G | 11×ATTCC | *** | |||||
13254488-GGGC-AGGT | 11098812-GGGC-AGGT | *** | ||||||
10010694-G-C | 10173085-G-C | *** | ||||||
10010717-T-C | 10173108-T-C | *** | ||||||
10060227-T-C | 10222618-T-C | *** | ||||||
22468424-C-G | 20306538-C-G | Z24922 | DYZ19 | *** | ||||
22469121-C-G | 20307235-C-G | FT459008 | DYZ19 | *** | ||||
22469801-A-G | 20307915-A-G | BY12495 | DYZ19 | *** | ||||
22471055-T-C | 20309169-T-C | BY2038 | DYZ19 | *** | ||||
22273663-A-G | 20111777-A-G | DYZ19 | *** | |||||
22469572-G-T | 20307686-G-T | BY48622 | DYZ19 | *** | ||||
27637124-A-G | 25490977-A-G | P1_Y2 | *** | |||||
28819205-G-T | 26673058-G-T | *** | ||||||
19411994-GAA-G | 17300114-GAA-G | *** | ||||||
22307195-G-C | 20145309-G-C | DYZ19 | *** | |||||
22322591-C-G | 20160705-C-G | DYZ19 | *** | |||||
58908690-G-C | 56682181-C-G | *** | ||||||
22472524-C-G | 20310638-C-G | DYZ19 | *** | |||||
22472535-C-G | 20310649-C-G | DYZ19 | *** | |||||
22469442-G-T | 20307556-G-T | FGC81712 | DYZ19 | *** | ||||
13110016-G-A | 10599502-G-A | *** | ||||||
22344085-T-C | 20182199-T-C | DYZ19 | *** | |||||
58855073-A-C | 56735798-T-G | *** | ||||||
4817267-CCTA-AATAG | 4949226-CCTA-AATAG | *** | ||||||
5241238-CTTTT-C | 5373197-CTTTT-C | 15×T | *** | |||||
58917655-TCN-T | *** | |||||||
22469150-G-A | 20307264-G-A | BY16490 | DYZ19 | *** | ||||
22365824-G-T | 20203938-G-T | DYZ19 | *** | |||||
13458708-TTCCAC-T | 11303032-TTCCAC-T | *** | ||||||
13484470-T-G | 11328794-T-G | *** | ||||||
58885391-T-C | 56705480-A-G | *** | ||||||
58885407-C-A | 56705464-G-T | *** | ||||||
22292283-T-G | 20130397-T-G | DYZ19 | *** | |||||
13122104-A-G | 10611590-A-G | *** | ||||||
58909763-T-A | 56681108-A-T | *** | ||||||
22292307-AT-GC | 20130421-AT-GC | DYZ19 | *** | |||||
22337374-G-C | 20175488-G-C | DYZ19 | *** | |||||
22470043-A-G | 20308157-A-G | BY2037 | DYZ19 | *** | ||||
9945645-T-A | 10108036-T-A | *** | ||||||
15109480-C-T | 12997567-C-T | *** | ||||||
22257128-A-G | 20095242-A-G | DYZ19 | *** | |||||
13480116-C-A | 11324440-C-A | *** | ||||||
22471051-G-A | 20309165-G-A | FGC29171 | DYZ19 | *** | ||||
13480113-C-G | 11324437-C-G | *** | ||||||
19489139-G-A | 17377259-G-A | *** | ||||||
2663921-T-A | 2795880-T-A | *** | ||||||
2877450-T-C | 3009409-T-C | *** | ||||||
3177311-G-A | 3309270-G-A | *** | ||||||
3271047-C-A | 3403006-C-A | *** | ||||||
3558247-A-T | 3690206-A-T | *** | ||||||
3591283-T-C | 3723242-T-C | *** | ||||||
3597874-A-G | 3729833-A-G | *** | ||||||
4260569-C-T | 4392528-C-T | *** | ||||||
4817276-A-G | 4949235-A-G | FGC39139 | *** | |||||
4887543-G-A | 5019502-G-A | *** | ||||||
5044031-A-G | 5175990-A-G | *** | ||||||
5355974-T-A | 5487933-T-A | *** | ||||||
5528246-G-A | 5660205-G-A | *** | ||||||
5743265-T-C | 5875224-T-C | *** | ||||||
6135802-T-C | 6267761-T-C | *** | ||||||
6135803-G-A | 6267762-G-A | *** | ||||||
6135813-A-G | 6267772-A-G | *** | ||||||
6135849-A-G | 6267808-A-G | *** | ||||||
6326263-C-T | 6458222-C-T | IR3_Dst | *** | |||||
6489243-T-C | 6621202-T-C | *** | ||||||
6995127-C-A | 7127086-C-A | 13×A | *** | |||||
7098758-C-T | 7230717-C-T | *** | ||||||
8731971-C-T | 8863930-C-T | *** | ||||||
9342864-G-A | 9505255-G-A | *** | ||||||
9342867-G-T | 9505258-G-T | *** | ||||||
9350173-A-C | 9512564-A-C | *** | ||||||
9570188-A-G | 9732579-A-G | IR3_Prx | *** | |||||
9570208-C-T | 9732599-C-T | IR3_Prx | *** | |||||
10060162-T-C | 10222553-T-C | *** | ||||||
10084450-G-T | 10246841-G-T | *** | ||||||
10091346-C-T | 10253737-C-T | *** | ||||||
10091347-A-G | 10253738-A-G | *** | ||||||
10091351-C-T | 10253742-C-T | *** | ||||||
10092418-T-C | 10254809-T-C | *** | ||||||
13129588-A-G | 10619074-A-G | *** | ||||||
13407357-G-A | 11251681-G-A | *** | ||||||
13476008-G-C | 11320332-G-C | *** | ||||||
13479555-C-T | 11323879-C-T | *** | ||||||
13480550-A-G | 11324874-A-G | *** | ||||||
13531752-C-T | 11376076-C-T | *** | ||||||
13576317-G-A | 11420641-G-A | *** | ||||||
13695401-T-C | 11539725-T-C | *** | ||||||
13876062-T-C | 11755356-T-C | *** | ||||||
13963874-G-T | 11843168-G-T | *** | ||||||
14435460-T-C | 12314733-T-C | *** | ||||||
14533047-C-T | 12421248-C-T | *** | ||||||
15243876-T-C | 13131962-T-C | *** | ||||||
16096802-T-C | 13984922-T-C | FT451986 | *** | |||||
17024894-G-A | 14913014-G-A | *** | ||||||
17349378-C-A | 15237498-C-A | 52×A | *** | |||||
18340642-A-T | 16228762-A-T | P6_Prx | *** | |||||
18409052-C-T | 16297172-C-T | P6_Gap | *** | |||||
19320223-A-G | 17208343-A-G | *** | ||||||
19612074-T-A | 17500194-T-A | P5_Prx | *** | |||||
19612075-C-A | 17500195-C-A | P5_Prx | *** | |||||
19612077-C-T | 17500197-C-T | P5_Prx | *** | |||||
19612078-G-A | 17500198-G-A | P5_Prx | *** | |||||
19657169-T-G | 17545289-T-G | P5_Prx | *** | |||||
19754215-G-T | 17642335-G-T | P5_Prx | *** | |||||
19921919-G-A | 17810039-G-A | P5_Prx | *** | |||||
19950208-G-C | 17838328-G-C | P5_Prx | *** | |||||
19950217-T-A | 17838337-T-A | P5_Prx | *** | |||||
19950232-A-G | 17838352-A-G | P5_Prx | *** | |||||
19950234-T-G | 17838354-T-G | P5_Prx | *** | |||||
20237584-A-T | 18075698-A-T | P5_Dst | *** | |||||
20946313-A-C | 18784427-A-C | P4_Dst | *** | |||||
21055410-A-G | 18893524-A-G | *** | ||||||
21376437-A-T | 19214551-A-T | *** | ||||||
21664853-G-A | 19502967-G-A | A14524 | *** | |||||
21852720-C-A | 19690834-C-A | *** | ||||||
22036511-T-A | 19874625-T-A | *** | ||||||
22111472-G-T | 19949586-G-T | *** | ||||||
22129855-A-T | 19967969-A-T | *** | ||||||
22223795-T-C | 20061909-T-C | DYZ19 | *** | |||||
22226976-A-T | 20065090-A-T | DYZ19 | *** | |||||
22226979-A-G | 20065093-A-G | DYZ19 | *** | |||||
22227002-T-G | 20065116-T-G | DYZ19 | *** | |||||
22234724-A-G | 20072838-A-G | DYZ19 | *** | |||||
22234727-T-C | 20072841-T-C | DYZ19 | *** | |||||
22248504-C-A | 20086618-C-A | DYZ19 | *** | |||||
22292255-C-G | 20130369-C-G | DYZ19 | *** | |||||
22292328-A-C | 20130442-A-C | DYZ19 | *** | |||||
22297091-C-T | 20135205-C-T | DYZ19 | *** | |||||
22308406-G-A | 20146520-G-A | DYZ19 | *** | |||||
22309376-G-T | 20147490-G-T | DYZ19 | *** | |||||
22311268-G-T | 20149382-G-T | DYZ19 | *** | |||||
22328424-A-C | 20166538-A-C | DYZ19 | *** | |||||
22343813-G-T | 20181927-G-T | DYZ19 | *** | |||||
22351199-C-T | 20189313-C-T | DYZ19 | *** | |||||
22357311-G-T | 20195425-G-T | DYZ19 | *** | |||||
22357314-C-T | 20195428-C-T | DYZ19 | *** | |||||
22357733-C-G | 20195847-C-G | DYZ19 | *** | |||||
22360003-G-C | 20198117-G-C | DYZ19 | *** | |||||
22365939-C-T | 20204053-C-T | DYZ19 | *** | |||||
22366990-G-A | 20205104-G-A | DYZ19 | *** | |||||
22366992-T-A | 20205106-T-A | DYZ19 | *** | |||||
22421279-T-A | 20259393-T-A | DYZ19 | *** | |||||
22433354-T-A | 20271468-T-A | DYZ19 | *** | |||||
22467739-C-G | 20305853-C-G | DYZ19 | *** | |||||
22467772-G-T | 20305886-G-T | BY160889 | DYZ19 | *** | ||||
22467788-C-T | 20305902-C-T | BY160891 | DYZ19 | *** | ||||
22467821-A-G | 20305935-A-G | DYZ19 | *** | |||||
22468401-A-G | 20306515-A-G | DYZ19 | *** | |||||
22468879-A-T | 20306993-A-T | BY222133 | DYZ19 | *** | ||||
22469113-A-T | 20307227-A-T | BY52987 | DYZ19 | *** | ||||
22469163-C-A | 20307277-C-A | DYZ19 | *** | |||||
22469744-A-G | 20307858-A-G | DYZ19 | *** | |||||
22469756-T-C | 20307870-T-C | DYZ19 | *** | |||||
22470055-C-T | 20308169-C-T | BY25112 | DYZ19 | *** | ||||
22470064-C-G | 20308178-C-G | DYZ19 | *** | |||||
22470585-T-A | 20308699-T-A | DYZ19 | *** | |||||
22470586-G-A | 20308700-G-A | DYZ19 | *** | |||||
22471309-C-A | 20309423-C-A | DYZ19 | *** | |||||
22471537-G-A | 20309651-G-A | BY35064 | DYZ19 | *** | ||||
22472453-T-A | 20310567-T-A | DYZ19 | *** | |||||
22472469-G-A | 20310583-G-A | DYZ19 | *** | |||||
22472493-A-T | 20310607-A-T | BY44735 | DYZ19 | *** | ||||
22472548-G-A | 20310662-G-A | DYZ19 | *** | |||||
22472552-T-A | 20310666-T-A | DYZ19 | *** | |||||
22473079-C-G | 20311193-C-G | DYZ19 | *** | |||||
22473088-A-C | 20311202-A-C | BY222848 | DYZ19 | *** | ||||
22473110-C-G | 20311224-C-G | BY23282 | DYZ19 | *** | ||||
22473118-T-A | 20311232-T-A | DYZ19 | *** | |||||
22473358-A-G | 20311472-A-G | FGC59981 | DYZ19 | *** | ||||
22491576-T-G | 20329690-T-G | DYZ19 | *** | |||||
22499849-C-T | 20337963-C-T | DYZ19 | *** | |||||
22504251-G-T | 20342365-G-T | DYZ19 | *** | |||||
22504309-T-A | 20342423-T-A | DYZ19 | *** | |||||
23713777-T-C | 21551891-T-C | *** | ||||||
23713786-G-A | 21551900-G-A | *** | ||||||
24539749-T-C | 22393602-T-C | P3_t2 | *** | |||||
24618774-A-T | 22472627-A-T | P3_t2 | *** | |||||
24618781-G-T | 22472634-G-T | P3_t2 | *** | |||||
24618785-T-C | 22472638-T-C | P3_t2 | *** | |||||
26924574-G-A | 24778427-G-A | P1_r3 | *** | |||||
27161910-C-T | 25015763-C-T | P1_g3 | *** | |||||
27281798-G-A | 25135651-G-A | P1_g3 | *** | |||||
27281809-T-C | 25135662-T-C | P1_g3 | *** | |||||
27457318-C-G | 25311171-C-G | P1_Y2 | *** | |||||
27480604-C-G | 25334457-C-G | P1_Y2 | *** | |||||
27482803-C-T | 25336656-C-T | P1_Y2 | *** | |||||
27589444-A-G | 25443297-A-G | P1_Y2 | *** | |||||
27589521-T-C | 25443374-T-C | P1_Y2 | *** | |||||
27589536-G-A | 25443389-G-A | P1_Y2 | *** | |||||
27589538-T-A | 25443391-T-A | P1_Y2 | *** | |||||
27659685-T-C | 25513538-T-C | P1_Y2 | *** | |||||
27712839-T-A | 25566692-T-A | P1_Y2 | *** | |||||
27712841-T-G | 25566694-T-G | P1_Y2 | *** | |||||
27712842-A-C | 25566695-A-C | P1_Y2 | *** | |||||
28041228-G-T | 25895081-G-T | P1_Y2 | *** | |||||
28041270-A-C | 25895123-A-C | P1_Y2 | *** | |||||
28041305-G-C | 25895158-G-C | P1_Y2 | *** | |||||
28041320-T-C | 25895173-T-C | P1_Y2 | *** | |||||
28041321-A-C | 25895174-A-C | P1_Y2 | *** | |||||
58823526-G-C | 56767345-C-G | *** | ||||||
58823537-T-A | 56767334-A-T | *** | ||||||
58823541-A-C | 56767330-T-G | *** | ||||||
58829049-G-T | 56761822-C-A | *** | ||||||
58833154-T-A | 56757717-A-T | *** | ||||||
58833158-C-T | 56757713-G-A | *** | ||||||
58840092-T-A | 56750779-A-T | *** | ||||||
58843528-T-A | 56747343-A-T | *** | ||||||
58843842-G-T | 56747029-C-A | *** | ||||||
58844808-G-T | 56746063-C-A | *** | ||||||
58844811-T-C | 56746060-A-G | *** | ||||||
58844821-T-C | 56746050-A-G | *** | ||||||
58846829-C-T | 56744042-G-A | *** | ||||||
58855422-C-G | 56735449-G-C | *** | ||||||
58855428-G-C | 56735443-C-G | *** | ||||||
58855432-A-G | 56735439-T-C | *** | ||||||
58857532-G-T | 56733339-C-A | *** | ||||||
58857562-G-C | 56733309-C-G | *** | ||||||
58863832-T-C | 56727039-A-G | *** | ||||||
58867420-C-T | 56723451-G-A | *** | ||||||
58870596-C-G | 56720275-G-C | *** | ||||||
58881422-G-C | 56709449-C-G | *** | ||||||
58885398-C-T | 56705473-G-A | *** | ||||||
58892570-C-A | 56698301-G-T | *** | ||||||
58908674-A-C | 56682197-T-G | *** | ||||||
58908696-A-T | 56682175-T-A | *** | ||||||
58908701-A-T | 56682170-T-A | *** | ||||||
58909099-C-G | 56681772-G-C | *** | ||||||
58909783-T-A | 56681088-A-T | *** | ||||||
58916150-C-T | 56674721-G-A | *** | ||||||
58916517-C-A | 56674354-G-T | *** | ||||||
13487272-CT-GG | 11331596-CT-GG | *** | ||||||
10010730-GTC-G | 10173121-GTC-G | *** | ||||||
2840099-C-CAAAAA | 2972058-C-CAAAAA | 20×A | *** | |||||
5285248-TA-T | 5417207-TA-T | *** | ||||||
5903661-T-TA | 6035620-T-TA | *** | ||||||
6135802-TG-CA | 6267761-TG-CA | *** | ||||||
6135829-TA-CG | 6267788-TA-CG | *** | ||||||
6135842-AGGAAA-GGGC | 6267801-AGGAAA-GGGC | *** | ||||||
7009187-CTTTTTTT-C | 7141146-CTTTTTTT-C | 19×T | *** | |||||
7545015-G-GA | 7676974-G-GA | *** | ||||||
8628154-CTTTTT-C | 8760113-CTTTTT-C | 16×T | *** | |||||
9204113-TC-GA | 9366504-TC-GA | *** | ||||||
9301401-CTA-TAG | 9463792-CTA-TAG | *** | ||||||
9350169-GCATA-CGATC | 9512560-GCATA-CGATC | *** | ||||||
9732895-C-CAAAAA | 9895286-C-CAAAAA | IR3_Prx | 20×A | *** | ||||
9952727-AAATA-TATTT | 10115118-AAATA-TATTT | *** | ||||||
10010715-GCTG-TCCA | 10173106-GCTG-TCCA | *** | ||||||
10031930-CGGCA-GGGAG | 10194321-CGGCA-GGGAG | *** | ||||||
10084313-AA-GG | 10246704-AA-GG | *** | ||||||
10084452-GGTC-AGAA | 10246843-GGTC-AGAA | *** | ||||||
13129586-GTA-TTG | 10619072-GTA-TTG | *** | ||||||
13140032-A-AC | 10629518-A-AC | *** | ||||||
13140035-TGAG-CACTCCA | 10629521-TGAG-CACTCCA | *** | ||||||
13140074-GAGTGCGTGTG-CATTCC | 10629560-GAGTGCGTGTG-CATTCC | *** | ||||||
13143892-CACCAA-TTCCAT | 10633378-CACCAA-TTCCAT | *** | ||||||
13331100-CA-GG | 11175424-CA-GG | *** | ||||||
13475998-AGCAAT-GACAAG | 11320322-AGCAAT-GACAAG | *** | ||||||
13483081-AGTTAAAAC-TGTCACAAA | 11327405-AGTTAAAAC-TGTCACAAA | *** | ||||||
13483100-GCAGGGCCTAGATAAA-ACAAATCCCAGAAAAT | 11327424-GCAGGGCCTAGATAAA-ACAAATCCCAGAAAAT | *** | ||||||
13723626-CTAC-ATAT | 11567950-CTAC-ATAT | *** | ||||||
13725285-TG-CA | 11569609-TG-CA | *** | ||||||
13725297-GAT-AAA | 11569621-GAT-AAA | *** | ||||||
13817193-GAATAGAATGGAC-TAATCGAGTGAAA | 11696487-GAATAGAATGGAC-TAATCGAGTGAAA | *** | ||||||
14501606-TA-T | 12389811-TA-T | *** | ||||||
14613459-C-CTTTTT | 12501657-C-CTTTTT | 26×T | *** | |||||
14704484-ATATAATAATT-A | 12592550-ATATAATAATT-A | *** | ||||||
14754067-C-CCCCCT | 12642136-C-CCCCCT | 27×T | *** | |||||
15358761-G-GAAAAAAA | 13246880-G-GAAAAAA | 26×A | *** | |||||
15366020-AG-A | 13254140-AG-A | *** | ||||||
16063227-CT-TC | 13951347-CT-TC | *** | ||||||
18608340-AT-A | 16496460-AT-A | 9×T | *** | |||||
20004701-A-ATAG | 17892821-A-ATAG | P5_Prx | *** | |||||
20004703-CA-C | 17892823-CA-C | P5_Prx | *** | |||||
20326007-C-CTTTTTTTTTTTTT | 18164121-C-CTTTTTTTTTTTTT | P5_Dst | 29×T | *** | ||||
22234722-GCAGTT-CCGATC | 20072836-GCAGTT-CCGATC | DYZ19 | *** | |||||
22273660-GTCA-CTAG | 20111774-GTCA-CTAG | DYZ19 | *** | |||||
22292181-TGCT-CGCG | 20130295-TGCT-CGCG | DYZ19 | *** | |||||
22292190-CA-GC | 20130304-CA-GC | DYZ19 | *** | |||||
22292202-AA-GT | 20130316-AA-GT | DYZ19 | *** | |||||
22308398-TGTTCT-AGATCG | 20146512-TGTTCT-AGATCG | DYZ19 | *** | |||||
22322547-AC-TA | 20160661-AC-TA | DYZ19 | *** | |||||
22337310-AGCAGTT-GTCATTTA | 20175424-AGCAGTT-GTCATTTA | DYZ19 | *** | |||||
22337345-GTGA-CAGT | 20175459-GTGA-CAGT | DYZ19 | *** | |||||
22344357-T-GATC | 20182471-T-GATC | DYZ19 | *** | |||||
22344872-ACTC-GTTT | 20182986-ACTC-GTTT | DYZ19 | *** | |||||
22355312-AGAAT-A | 20193426-AGAAT-A | DYZ19 | *** | |||||
22355332-TAC-AGT | 20193446-TAC-AGT | DYZ19 | *** | |||||
22355349-CATA-TACT | 20193463-CATA-TACT | DYZ19 | *** | |||||
22355376-GG-TT | 20193490-GG-TT | DYZ19 | *** | |||||
22357303-GTGG-AT | 20195417-GTGG-AT | DYZ19 | *** | |||||
22360158-T-TCCGA | 20198272-T-TCCGA | DYZ19 | *** | |||||
22365822-AAGAAC-TTTAAT | 20203936-AAGAAC-TTTAAT | DYZ19 | *** | |||||
22421401-T-TTAA | 20259515-T-TTAA | DYZ19 | *** | |||||
22467808-GCTCCAGT-CCTGCAGA | 20305922-GCTCCAGT-CCTGCAGA | DYZ19 | *** | |||||
22468414-GTAG-CTCA | 20306528-GTAG-CTCA | DYZ19 | *** | |||||
22468940-TAG-ACT | 20307054-TAG-ACT | DYZ19 | *** | |||||
22469107-TTTCCTA-GTTCCTT | 20307221-TTTCCTA-GTTCCTT | DYZ19 | *** | |||||
22469735-GCTTT-CCCTC | 20307849-GCTTT-CCCTC | DYZ19 | *** | |||||
22469767-ACAGT-GCAGG | 20307881-ACAGT-GCAGG | DYZ19 | *** | |||||
22470949-TGACTG-T | 20309063-TGACTG-T | DYZ19 | *** | |||||
22470958-CA-AAG | 20309072-CA-AAG | DYZ19 | *** | |||||
22471055-TTTAAG-CTTTGT | 20309169-TTTAAG-CTTTGT | DYZ19 | *** | |||||
22471309-CT-AC | 20309423-CT-AC | DYZ19 | *** | |||||
22472453-TGT-AGG | 20310567-TGT-AGG | DYZ19 | *** | |||||
22472548-GACCTTAG-AACCATAC | 20310662-GACCTTAG-AACCATAC | DYZ19 | *** | |||||
22472664-GAA-AAG | 20310778-GAA-AAG | DYZ19 | *** | |||||
22473380-GACACTTTCA-CGCAGGTTCG | 20311494-GACACTTTCA-CGCAGGTTCG | DYZ19 | *** | |||||
24264513-CTTTTT-C | 22118366-CTTTTT-C | P3_b1 | 18×T | *** | ||||
24386959-TCT-C | 22240812-TCT-C | *** | ||||||
24388278-CCT-AGG | 22242131-CCT-AGG | *** | ||||||
24618781-GGTGT-TGTGC | 22472634-GGTGT-TGTGC | P3_t2 | *** | |||||
26124427-C-CAAAAAAAAA | 23978280-C-CAAAAAAAAA | P1_Y1 | 31×A | *** | ||||
27318716-TG-CT | 25172569-TG-CT | P1_g3 | *** | |||||
27589506-CTTAT-ATTAA | 25443359-CTTAT-ATTAA | P1_Y2 | *** | |||||
27589527-CCATTT-TTACAC | 25443380-CCATTT-TTACAC | P1_Y2 | *** | |||||
27699703-TATATG-CACACA | 25553556-TATATG-CACACA | P1_Y2 | *** | |||||
27704155-AGACACAG-GGACACAACAA | 25558008-AGACACAG-GGACACAACAA | P1_Y2 | *** | |||||
27712839-TTTA-ATGC | 25566692-TTTA-ATGC | P1_Y2 | *** | |||||
28107477-TTAAG-T | 25961330-TTAAG-T | P1_Y2 | *** | |||||
58819362-GAA-G | 56771506-ATT-A | *** | ||||||
58823520-GT-CC | 56767350-AC-GG | *** | ||||||
58829060-GTTCG-ATTCC | 56761807-CGAAC-GGAAT | *** | ||||||
58833134-GTGCT-ATTCC | 56757733-AGCAC-GGAAT | *** | ||||||
58833162-TAA-CAC | 56757707-TTA-GTG | *** | ||||||
58844026-A-ATTCCATTCC | 56746842-A-AAAGGAATGG | *** | ||||||
58847214-CCAGC-GCATT | 56743653-GCTGG-AATGC | *** | ||||||
58867446-GATTC-CATTT | 56723421-GAATC-AAATG | *** | ||||||
58872395-CGA-C | 56718473-ATC-A | *** | ||||||
58889913-CTCT-GTTG | 56700955-AGAG-CAAC | *** | ||||||
58903698-ATTG-TTTC | 56687170-CAAT-GAAA | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.