Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > L513/S215/DF1 > S5668 > Z16340 > FGC9807 > FGC9795 > FGC9804 > FGC9809 > FGC9800 > Z16337 > BY3093

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
6PN7S
Manual
Edits
7037480-C-A 7169439-C-A FGC9814 YY+
14845512-C-T 12733578-C-T FGC9817 YY+
7122762-G-T 7254721-G-T FGC9815 Y+
21264747-G-C 19102861-G-C FGC9818 YY+
21444156-C-T 19282270-C-T FGC9819 YY+
3564071-A-G 3696030-A-G FGC9813 +
16618188-G-A 14506308-G-A FGC9802 Y+
4132040-A-G 4263999-A-G FGC9799 +
4284435-A-G 4416394-A-G FGC9791 +
15745926-G-C 13634046-G-C FGC9789 Y+
5198615-T-G 5330574-T-G FGC9779 +
3544354-A-G 3676313-A-G FGC9805 +
2966727-C-T 3098686-C-T FGC9812 *
5096259-T-TA 5228218-T-TA FGC9825 *
3177428-C-T 3309387-C-T FGC9806 *
23077631-T-C 20915745-T-C FGC9820 Y*
23109480-C-A 20947594-C-A FGC9821 Y*
19937284-G-GCCCC 17825404-G-GCCCC P5_Prx 13×C**
5786608-C-CAAAAAAAAAAAAAA 5918567-C-CAAAAAAAAAAAAAA 20×A**
28585558-C-T 26439411-C-T **
16340147-G-GAAAA 14228267-G-GAAAA 22×A**
7536073-T-A 7668032-T-A **
14612455-TGATAGATAGATAGATAGATA-T 12500661-TGATAGATAGATA-T 14×GATA**
4306827-AGTATTATTATATGTGAGTTTTTGTTTCT-A 4438786-AGTATTATTATATGTGAGTTTTTGTTTCT-A **
13877960-T-A 11757254-T-A A13700 **
22344142-C-G 20182256-C-G DYZ19 **
15320655-AGAG-A 13208761-AGAG-A **
3071275-T-C 3203234-T-C **
15215195-C-T 13103281-C-T **
13419165-G-GA 11263489-G-GA 8×A**
27665667-C-T 25519520-C-T P1_Y2 ***
58830892-T-C 56759979-A-G ***
27447354-A-G 25301207-A-G P1_Y2 ***
27440980-C-T 25294833-C-T P1_Y2 ***
27665674-C-T 25519527-C-T P1_Y2 ***
27440979-C-T 25294832-C-T P1_Y2 ***
58828536-C-G 56762335-G-C ***
28083048-T-A 25936901-T-A P1_Y2 ***
27416791-T-C 25270644-T-C P1_g3 ***
27440978-T-A 25294831-T-A P1_Y2 ***
27440674-C-T 25294527-C-T P1_Y2 ***
27420759-T-G 25274612-T-G P1_g3 ***
27416795-T-C 25270648-T-C P1_g3 ***
27416790-T-C 25270643-T-C P1_g3 ***
27416788-T-C 25270641-T-C P1_g3 ***
58830896-G-T 56759975-C-A ***
27374679-C-A 25228532-C-A P1_g3 ***
27374678-T-A 25228531-T-A P1_g3 ***
27374649-G-A 25228502-G-A P1_g3 ***
27374637-T-A 25228490-T-A P1_g3 ***
27374634-C-A 25228487-C-A P1_g3 ***
27284939-G-A 25138792-G-A P1_g3 ***
27284930-G-A 25138783-G-A P1_g3 ***
27957509-T-C 25811362-T-C P1_Y2 ***
27957515-G-C 25811368-G-C P1_Y2 ***
27957511-A-C 25811364-A-C P1_Y2 ***
28076862-T-A 25930715-T-A P1_Y2 ***
28083042-G-C 25936895-G-C P1_Y2 ***
28083038-A-C 25936891-A-C P1_Y2 ***
28083061-A-C 25936914-A-C P1_Y2 ***
28083037-A-T 25936890-A-T P1_Y2 ***
28083035-A-T 25936888-A-T P1_Y2 ***
28083033-G-T 25936886-G-T P1_Y2 ***
28083023-G-T 25936876-G-T P1_Y2 ***
28078590-A-G 25932443-A-G P1_Y2 ***
28076904-T-A 25930757-T-A P1_Y2 ***
28076884-A-T 25930737-A-T P1_Y2 ***
28076876-T-G 25930729-T-G P1_Y2 ***
28076875-A-G 25930728-A-G P1_Y2 ***
28035807-A-T 25889660-A-T P1_Y2 ***
27957514-G-T 25811367-G-T P1_Y2 ***
28398870-A-C 26252723-A-C P1_gr2 ***
28035805-A-T 25889658-A-T P1_Y2 ***
28398872-T-A 26252725-T-A P1_gr2 ***
27957536-C-T 25811389-C-T P1_Y2 ***
28398874-T-A 26252727-T-A P1_gr2 ***
28398877-G-C 26252730-G-C P1_gr2 ***
27957526-A-T 25811379-A-T P1_Y2 ***
27957518-G-C 25811371-G-C P1_Y2 ***
26496256-G-T 24350109-G-T P1_Y1 ***
27957517-G-C 25811370-G-C P1_Y2 ***
27957516-G-C 25811369-G-C P1_Y2 ***
28083047-T-A 25936900-T-A P1_Y2 ***
26496261-G-T 24350114-G-T P1_Y1 ***
22113187-C-CAAAAAA 19951301-C-CAAAAAA 23×A***
26496215-G-A 24350068-G-A P1_Y1 ***
22504827-T-G 20342941-T-G DYZ19 ***
24627778-G-A 22481631-G-A P3_t2 ***
24627763-G-T 22481616-G-T P3_t2 ***
24608889-G-A 22462742-G-A P3_t2 ***
24223700-C-T 22077553-C-T P3_b1 ***
24146131-C-T 21999984-C-T P3_b1 ***
24146103-C-T 21999956-C-T P3_b1 ***
24146101-C-A 21999954-C-A P3_b1 ***
24146099-A-C 21999952-A-C P3_b1 ***
23832834-T-C 21670948-T-C ***
22692988-G-T 20531102-G-T ***
22692983-G-A 20531097-G-A ***
22504802-G-A 20342916-G-A DYZ19 ***
24672341-G-T 22526194-G-T P3_b2 ***
22500116-A-T 20338230-A-T DYZ19 ***
22499760-A-T 20337874-A-T DYZ19 ***
22499490-T-G 20337604-T-G DYZ19 ***
22495934-T-C 20334048-T-C DYZ19 ***
22488826-C-A 20326940-C-A DYZ19 ***
22488822-A-T 20326936-A-T DYZ19 ***
22488804-G-A 20326918-G-A DYZ19 ***
22488801-C-G 20326915-C-G DYZ19 ***
22488800-A-T 20326914-A-T DYZ19 ***
22481641-T-A 20319755-T-A DYZ19 ***
22456649-G-T 20294763-G-T DYZ19 ***
22424384-G-C 20262498-G-C DYZ19 ***
24672339-A-G 22526192-A-G P3_b2 ***
24706184-T-G 22560037-T-G P3_b2 ***
26461677-G-T 24315530-G-T P1_Y1 ***
25853977-C-A 23707830-C-A P1_Y1 ***
26461671-G-C 24315524-G-C P1_Y1 ***
26386825-A-T 24240678-A-T P1_Y1 ***
26350215-G-C 24204068-G-C P1_Y1 ***
26350210-T-G 24204063-T-G P1_Y1 ***
26350201-T-A 24204054-T-A P1_Y1 ***
26350199-T-A 24204052-T-A P1_Y1 ***
26350198-C-A 24204051-C-A P1_Y1 ***
58830903-T-G 56759968-A-C ***
26350196-C-T 24204049-C-T P1_Y1 ***
25899598-C-T 23753451-C-T P1_Y1 ***
25853999-C-T 23707852-C-T P1_Y1 ***
25853994-A-C 23707847-A-C P1_Y1 ***
25853963-A-G 23707816-A-G P1_Y1 ***
25207921-G-A 23061774-G-A P2_r1 ***
25853962-C-A 23707815-C-A P1_Y1 ***
25853960-A-T 23707813-A-T P1_Y1 ***
25853958-C-A 23707811-C-A P1_Y1 ***
25658038-G-A 23511891-G-A P1_b3 ***
25505528-G-T 23359381-G-T P1_gr1 ***
25505522-A-T 23359375-A-T P1_gr1 ***
25505521-A-T 23359374-A-T P1_gr1 ***
25505519-G-T 23359372-G-T P1_gr1 ***
25383390-A-T 23237243-A-T P2_r2 ***
25323160-C-A 23177013-C-A P2_r1 ***
25290058-G-C 23143911-G-C P2_r1 ***
25290032-G-A 23143885-G-A P2_r1 ***
58830898-A-C 56759973-T-G ***
58844387-C-A 56746484-G-T ***
58831487-T-G 56759384-A-C ***
7269610-C-CTTT 7401569-C-CTTT 22×T***
19948153-CCCTCCCTCCCTCCCTCCCTCCCTCCCTC-T 17836273-CCCTCCCTCCCTCCCTCCCTCCCTCCCTC-T P5_Prx ***
17332750-CAAAAA-C 15220870-CAAAAA-C 22×A***
16242402-C-CTTTTT 14130522-C-CTTTTT 18×T***
13611988-G-GTTTTTTTT 11456312-G-GTTTTTTTT 19×T***
13500110-CAAAAAA-C 11344434-CAAAAAA-C 16×A***
13475917-TAA-CAG 11320241-TAA-CAG ***
13214289-A-ATCT 11058613-A-ATCT 19×T***
13199164-C-CAAAAAAAA 11043488-C-CAAAAAAAA 18×A***
9942043-A-ATTT 10104434-A-ATTT 28×T***
9771054-A-ATTTTAACTTTTTT 9933445-A-ATTTTAACTTTTTT 16×T***
7534392-G-GTTT 7666351-G-GTTT 13×T***
7179734-G-GTGTTTT 7311693-G-GTGTTTT 25×T***
20424861-GAG-AAGA 18262975-GAG-AAGA P5_Dst ***
6260333-AA-CC 6392292-AA-CC IR3_Dst ***
6260285-TAAGCACTCTC-G 6392244-TAAGCACTCTC-G IR3_Dst ***
6260281-C-CT 6392240-C-CT IR3_Dst ***
6260275-CA-C 6392234-CA-C IR3_Dst ***
6260265-TTGTGTTAG-T 6392224-TTGTGTTAG-T IR3_Dst ***
6260221-AAGCAGAGCCAAAAGGGTTGGAGACTCAAAAAACTAGCCCTGA-TCTGTCCCAGACTGGGATCGAGGAACAATTTCCC 6392180-AAGCAGAGCCAAAAGGGTTGGAGACTCAAAAAACTAGCCCTGA-TCTGTCCCAGACTGGGATCGAGGAACAATTTCCC IR3_Dst ***
5378192-C-CA 5510151-C-CA 21×A***
4636092-T-TAAAAA 4768051-T-TAAAAA 15×A***
4098639-C-CA 4230598-C-CA 20×A***
3640830-C-CTCCTTCCT 3772789-C-CTCCTTCCT 12×TCCT***
15358788-G-AAA 13246908-G-AAA ***
8644324-C-CAAAA 8776283-C-CAAAA 32×A***
20326037-G-TTTTTTTT 18164151-G-TTTTTTTT P5_Dst ***
20533500-T-TA 18371614-T-TA P5_Dst 9×A***
58916605-A-G 56674266-T-C ***
22504612-AGTT-TGTC 20342726-AGTT-TGTC DYZ19 ***
59007959-C-CAAAA 56861812-C-CAAAA 26×A***
58906649-CATTCTATTCA-C 56684211-ATGAATAGAAT-A ***
58855013-TC-CT 56735857-GA-AG ***
58845143-TTCCATTGATTTGAC-T 56745707-GAATGGAGTCAAATC-G ***
58831542-CA-GT 56759328-TG-AC ***
58831521-GC-CA 56759349-GC-TG ***
58823348-ATTCA-GATCT 56767519-TGAAT-AGATC ***
28534940-CTTT-C 26388793-CTTT-C 18×T***
26538252-C-CA 24392105-C-CA P1_g2 17×A***
25524693-C-CTTTTTTT 23378546-C-CTTTTTTT P1_gr1 33×T***
23127414-C-CAAAA 20965528-C-CAAAA 24×A***
22504708-CCAGT-GCAGA 20342822-CCAGT-GCAGA DYZ19 ***
22504362-GGTTTCTGT-TGTCTCTTC 20342476-GGTTTCTGT-TGTCTCTTC DYZ19 ***
20568537-C-CAA 18406651-C-CAA P5_Dst 27×A***
22481715-GA-G 20319829-GA-G DYZ19 ***
22481673-AT-TA 20319787-AT-TA DYZ19 ***
22420965-GGTA-AGTG 20259079-GGTA-AGTG DYZ19 ***
22420942-CGG-TTGT 20259056-CGG-TTGT DYZ19 ***
22366759-ATTGTTTCTC-TTTGTTCCTT 20204873-ATTGTTTCTC-TTTGTTCCTT DYZ19 ***
22366002-ACCAGAGG-TCCAGAGT 20204116-ACCAGAGG-TCCAGAGT DYZ19 ***
22293076-TTTTG-GGTTA 20131190-TTTTG-GGTTA DYZ19 ***
22248583-C-CT 20086697-C-CT DYZ19 ***
22248578-CT-C 20086692-CT-C DYZ19 ***
22248543-TTGG-GTGT 20086657-TTGG-GTGT DYZ19 ***
22248532-CTG-TTGA 20086646-CTG-TTGA DYZ19 ***
22248527-TC-T 20086641-TC-T DYZ19 ***
7534406-G-GTT 7666365-G-GTT 19×T***
58913090-T-G 56677781-A-C ***
58831506-C-T 56759365-G-A ***
58844883-C-T 56745988-G-A ***
58872383-T-G 56718488-A-C ***
58872380-A-T 56718491-T-A ***
58868586-C-T 56722285-G-A ***
58865822-T-C 56725049-A-G ***
58865690-A-G 56725181-T-C ***
58865683-C-T 56725188-G-A ***
58861644-A-T 56729227-T-A ***
58861467-C-G 56729404-G-C ***
58855036-T-A 56735835-A-T ***
58854382-C-G 56736489-G-C ***
58848535-G-C 56742336-C-G ***
58848501-A-T 56742370-T-A ***
58844871-A-C 56746000-T-G ***
58876848-C-T 56714023-G-A ***
58844595-C-T 56746276-G-A ***
22421314-A-G 20259428-A-G DYZ19 ***
58844361-A-C 56746510-T-G ***
58843750-A-G 56747121-T-C ***
58843661-A-G 56747210-T-C ***
58843653-T-G 56747218-A-C ***
58843201-T-A 56747670-A-T ***
58841330-G-T 56749541-C-A ***
58838251-C-T 56752620-G-A ***
58835979-G-T 56754892-C-A ***
58833092-T-G 56757779-A-C ***
58831514-T-A 56759357-A-T ***
58872398-T-A 56718473-A-T ***
58877049-C-G 56713822-G-C ***
58911382-T-C 56679489-A-G ***
58903746-C-T 56687125-G-A ***
58911363-C-A 56679508-G-T ***
58911361-T-A 56679510-A-T ***
58911360-G-A 56679511-C-T ***
58911356-T-C 56679515-A-G ***
58911344-C-T 56679527-G-A ***
58909167-G-A 56681704-C-T ***
58908515-A-C 56682356-T-G ***
58908514-G-C 56682357-C-G ***
58907254-A-G 56683617-T-C ***
58904060-G-A 56686811-C-T ***
58904051-C-A 56686820-G-T ***
58903748-A-T 56687123-T-A ***
58898508-C-G 56692363-G-C ***
58877120-C-A 56713751-G-T ***
58890426-G-C 56700445-C-G ***
58889901-A-C 56700970-T-G ***
58881862-T-C 56709009-A-G ***
58881850-T-G 56709021-A-C ***
58881841-C-T 56709030-G-A ***
58881833-T-A 56709038-A-T ***
58881830-T-A 56709041-A-T ***
58881825-T-A 56709046-A-T ***
58881822-C-G 56709049-G-C ***
58881821-C-T 56709050-G-A ***
58881418-G-A 56709453-C-T ***
58881408-A-T 56709463-T-A ***
22421596-G-T 20259710-G-T DYZ19 ***
22357131-G-T 20195245-G-T DYZ19 ***
22367910-T-A 20206024-T-A DYZ19 ***
10084324-A-T 10246715-A-T ***
13110472-G-T 10599958-G-T ***
10090730-C-A 10253121-C-A ***
10090711-G-T 10253102-G-T ***
10090688-C-A 10253079-C-A ***
10090677-G-T 10253068-G-T ***
10090635-G-C 10253026-G-C ***
10090443-A-C 10252834-A-C ***
10090434-G-T 10252825-G-T ***
10090422-A-T 10252813-A-T ***
10090395-C-T 10252786-C-T ***
10090394-C-T 10252785-C-T ***
10084326-A-T 10246717-A-T ***
10084309-A-T 10246700-A-T ***
13475375-G-T 11319699-G-T ***
10084305-G-A 10246696-G-A ***
10084302-A-G 10246693-A-G ***
9536688-A-T 9699079-A-T IR3_Prx ***
9536662-C-G 9699053-C-G IR3_Prx ***
9536661-A-T 9699052-A-T IR3_Prx ***
9429186-T-C 9591577-T-C ***
9345032-A-G 9507423-A-G ***
9227717-C-T 9390108-C-T ***
9220010-T-A 9382401-T-A ***
9220009-C-G 9382400-C-G ***
9220004-G-T 9382395-G-T ***
9204117-T-A 9366508-T-A ***
13475365-G-A 11319689-G-A ***
13475910-C-A 11320234-C-A ***
8826677-T-A 8958636-T-A ***
13725003-A-T 11569327-A-T ***
16364058-C-T 14252178-C-T 27×TA***
16153010-C-T 14041130-C-T P8_Dst ***
16153008-T-A 14041128-T-A P8_Dst ***
15294162-T-A 13182261-T-A ***
15294156-T-A 13182255-T-A ***
15294155-C-A 13182254-C-A ***
15294152-C-A 13182251-C-A ***
15294149-A-T 13182248-A-T ***
13747918-A-T 11592242-A-T ***
13728731-T-G 11573055-T-G ***
13728721-T-A 11573045-T-A ***
13728719-A-G 11573043-A-G ***
13724904-C-G 11569228-C-G ***
13475995-G-A 11320319-G-A ***
13724676-T-A 11569000-T-A ***
13724647-G-T 11568971-G-T ***
13721940-G-T 11566264-G-T ***
13721939-G-T 11566263-G-T ***
13721933-T-A 11566257-T-A ***
13721620-G-A 11565944-G-A ***
13721615-C-G 11565939-C-G ***
13721614-G-T 11565938-G-T ***
13721596-A-T 11565920-A-T ***
13721589-T-A 11565913-T-A ***
13721579-T-A 11565903-T-A ***
13703156-C-G 11547480-C-G ***
8826678-C-A 8958637-C-A 29×A***
8826676-C-A 8958635-C-A ***
17994739-G-A 15882859-G-A P7_Prx ***
58879381-A-T 56711490-T-A ***
22295897-A-T 20134011-A-T DYZ19 ***
22343203-T-G 20181317-T-G DYZ19 ***
13703159-C-T 11547483-C-T ***
22480708-A-C 20318822-A-C DYZ19 ***
22257033-C-T 20095147-C-T DYZ19 ***
13484968-T-C 11329292-T-C ***
10084346-T-A 10246737-T-A ***
58915880-A-G 56674991-T-C ***
58967652-N-T 56821505-N-T ***
9429170-A-G 9591561-A-G ***
22496000-TGCA-GGCG 20334114-TGCA-GGCG DYZ19 ***
22252956-TACGT-AGTGG 20091070-TACGT-AGTGG DYZ19 ***
58848529-G-C 56742342-C-G ***
24435349-A-G 22289202-A-G ***
22496026-C-T 20334140-C-T DYZ19 ***
20367902-A-T 18206016-A-T P5_Dst ***
22236408-AT-TG 20074522-AT-TG DYZ19 ***
58844025-CA-C 56746844-AT-A ***
22252974-A-T 20091088-A-T DYZ19 ***
22263781-T-C 20101895-T-C DYZ19 ***
22263789-G-T 20101903-G-T DYZ19 ***
22421582-TTTAA-CTTAG 20259696-TTTAA-CTTAG DYZ19 ***
58877042-C-T 56713829-G-A ***
58819922-A-T 56770949-T-A ***
22481215-G-C 20319329-G-C DYZ19 ***
14491317-T-C ***
10090662-G-C 10253053-G-C ***
58879449-C-G 56711422-G-C ***
8826675-T-A 8958634-T-A ***
5659731-A-G 5791690-A-G ***
8785744-G-T 8917703-G-T ***
6722506-C-G 6854465-C-G ***
6722503-G-T 6854462-G-T ***
6722488-G-A 6854447-G-A ***
6272160-A-T 6404119-A-T IR3_Dst ***
6260316-C-G 6392275-C-G IR3_Dst ***
6260305-A-T 6392264-A-T IR3_Dst ***
6260257-G-T 6392216-G-T IR3_Dst ***
6260256-A-T 6392215-A-T IR3_Dst ***
6260238-T-A 6392197-T-A IR3_Dst ***
6260223-G-T 6392182-G-T IR3_Dst ***
6214158-A-G 6346117-A-G IR3_Dst ***
4818667-C-A 4950626-C-A ***
26564156-G-C 24418009-G-C P1_g2 ***
4616962-A-G 4748921-A-G ***
4090052-T-G 4222011-T-G ***
3930604-T-C 4062563-T-C ***
3394445-A-C 3526404-A-C ***
3316466-G-A 3448425-G-A ***
3255814-G-A 3387773-G-A 10×A***
22241410-A-T 20079524-A-T DYZ19 ***
22360154-G-T 20198268-G-T DYZ19 ***
22309462-G-T 20147576-G-T DYZ19 ***
22241404-A-G 20079518-A-G DYZ19 ***
13475916-A-G 11320240-A-G ***
22341971-A-T 20180085-A-T DYZ19 ***
4621805-A-G 4753764-A-G ***
17523557-C-T 15411677-C-T ***
17994746-C-A 15882866-C-A P7_Prx ***
22366923-C-A 20205037-C-A DYZ19 ***
21012093-A-T 18850207-A-T P4_Dst ***
22248354-A-C 20086468-A-C DYZ19 ***
22248334-C-T 20086448-C-T DYZ19 ***
22248332-T-A 20086446-T-A DYZ19 ***
22241406-T-G 20079520-T-G DYZ19 ***
22241399-C-T 20079513-C-T BY30882 DYZ19 ***
22241398-A-T 20079512-A-T DYZ19 ***
22241386-C-T 20079500-C-T DYZ19 ***
22235045-C-G 20073159-C-G DYZ19 ***
22235029-A-T 20073143-A-T DYZ19 ***
22234725-G-A 20072839-G-A DYZ19 ***
22234369-C-A 20072483-C-A DYZ19 ***
22232065-G-T 20070179-G-T DYZ19 ***
21011345-C-T 18849459-C-T P4_Dst ***
22250359-A-C 20088473-A-C DYZ19 ***
21011339-C-T 18849453-C-T P4_Dst ***
21011337-C-T 18849451-C-T P4_Dst ***
20990155-C-A 18828269-C-A P4_Dst ***
20990148-G-T 18828262-G-T P4_Dst ***
20798767-A-T 18636881-A-T P4_Prx ***
20574344-A-C 18412458-A-C P5_Dst ***
20574343-C-T 18412457-C-T P5_Dst ***
20574338-T-A 18412452-T-A P5_Dst ***
20574312-G-C 18412426-G-C P5_Dst ***
20574308-C-G 18412422-C-G P5_Dst ***
20574291-C-A 18412405-C-A P5_Dst ***
20574289-C-T 18412403-C-T P5_Dst ***
22248551-G-C 20086665-G-C DYZ19 ***
22252482-T-G 20090596-T-G DYZ19 ***
20570452-C-T 18408566-C-T P5_Dst ***
22343520-T-C 20181634-T-C DYZ19 ***
22366782-A-T 20204896-A-T DYZ19 ***
22366449-G-C 20204563-G-C DYZ19 ***
22366012-G-T 20204126-G-T DYZ19 ***
22365715-C-A 20203829-C-A DYZ19 ***
22360432-T-A 20198546-T-A DYZ19 ***
22360381-G-A 20198495-G-A DYZ19 ***
22357700-T-A 20195814-T-A DYZ19 ***
22357137-A-T 20195251-A-T DYZ19 ***
26228689-C-CTTTT 24082542-C-CTTTT P1_Y1 27×T***
22344132-C-T 20182246-C-T DYZ19 ***
22344024-G-A 20182138-G-A DYZ19 ***
22343991-T-A 20182105-T-A DYZ19 ***
22341831-A-G 20179945-A-G DYZ19 ***
22265800-T-G 20103914-T-G DYZ19 ***
22337361-T-G 20175475-T-G DYZ19 ***
22337359-G-T 20175473-G-T DYZ19 ***
22337354-C-T 20175468-C-T DYZ19 ***
22324822-T-G 20162936-T-G DYZ19 ***
22308561-G-C 20146675-G-C DYZ19 ***
22308556-G-T 20146670-G-T DYZ19 ***
22308502-C-A 20146616-C-A DYZ19 ***
22308501-C-A 20146615-C-A DYZ19 ***
22308466-G-A 20146580-G-A DYZ19 ***
22273676-A-T 20111790-A-T DYZ19 ***
22273665-T-C 20111779-T-C DYZ19 ***
22268210-T-A 20106324-T-A DYZ19 ***
22266210-G-T 20104324-G-T DYZ19 ***
20574057-A-G 18412171-A-G P5_Dst ***
20570440-G-A 18408554-G-A P5_Dst ***
17994754-G-A 15882874-G-A P7_Prx ***
19577409-C-T 17465529-C-T P5_Prx ***
19977338-C-T 17865458-C-T P5_Prx ***
19977324-T-C 17865444-T-C P5_Prx ***
19977303-A-T 17865423-A-T P5_Prx ***
19977289-T-A 17865409-T-A P5_Prx ***
19754908-T-C 17643028-T-C P5_Prx ***
19754902-T-C 17643022-T-C P5_Prx ***
19710671-T-G 17598791-T-G P5_Prx ***
19710629-T-C 17598749-T-C P5_Prx ***
19687303-A-T 17575423-A-T P5_Prx ***
19687276-A-C 17575396-A-C P5_Prx ***
19577430-C-A 17465550-C-A P5_Prx ***
19577413-G-A 17465533-G-A P5_Prx ***
19577407-A-G 17465527-A-G P5_Prx ***
20040576-G-A 17928696-G-A P5_Prx ***
19577398-G-A 17465518-G-A P5_Prx ***
19577393-A-G 17465513-A-G P5_Prx ***
18437875-T-A 16325995-T-A P6_Dst ***
18437826-G-T 16325946-G-T P6_Dst ***
18437681-G-T 16325801-G-T P6_Dst ***
18274975-T-C 16163095-T-C P6_Prx ***
17994770-G-T 15882890-G-T P7_Prx ***
17994768-G-A 15882888-G-A P7_Prx ***
17994767-G-C 15882887-G-C P7_Prx ***
17994764-A-G 15882884-A-G P7_Prx ***
17994759-A-G 15882879-A-G P7_Prx ***
17994758-C-T 15882878-C-T P7_Prx ***
20040564-A-G 17928684-A-G P5_Prx ***
20124960-A-T 18013080-A-T P5_Dst ***
20511681-T-C 18349795-T-C P5_Dst ***
20405122-T-A 18243236-T-A P5_Dst ***
20511660-C-G 18349774-C-G P5_Dst ***
20511656-G-T 18349770-G-T P5_Dst ***
20511621-C-A 18349735-C-A P5_Dst ***
20511569-T-G 18349683-T-G P5_Dst ***
20466554-G-A 18304668-G-A P5_Dst ***
20427596-G-A 18265710-G-A P5_Dst ***
20427557-A-T 18265671-A-T P5_Dst ***
20427556-C-A 18265670-C-A P5_Dst ***
20427528-G-A 18265642-G-A P5_Dst ***
20427509-A-G 18265623-A-G P5_Dst ***
20424861-G-A 18262975-G-A P5_Dst ***
20405127-G-T 18243241-G-T P5_Dst ***
20405106-G-A 18243220-G-A P5_Dst ***
20124966-A-G 18013086-A-G P5_Dst ***
20368337-G-A 18206451-G-A P5_Dst ***
20368331-T-G 18206445-T-G P5_Dst ***
20368298-C-A 18206412-C-A P5_Dst ***
20355766-C-A 18193880-C-A P5_Dst ***
20355696-T-G 18193810-T-G P5_Dst ***
20355694-A-C 18193808-A-C P5_Dst ***
20355693-C-T 18193807-C-T P5_Dst ***
20355666-T-A 18193780-T-A P5_Dst ***
20221618-A-T 18059732-A-T P5_Dst ***
20221614-G-T 18059728-G-T P5_Dst ***
20221611-C-A 18059725-C-A P5_Dst ***
20221609-G-A 18059723-G-A P5_Dst ***
20127905-C-T 18016025-C-T P5_Dst ***
59009242-C-CA 56863095-C-CA 9×A***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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