Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > FGC11134 > A353 > Z16250 > A114 > CTS4466/S1136 > S1115 > A541 > S1121 > Z16251 > A1134 > ~24847026-G-A > Z20766 > A806

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
N59178
BigY2
N59178
20977514-G-A 18815628-G-A P4_Dst A*
18437028-G-A 16325148-G-A P6_Dst A*
20649312-C-T 18487426-C-T P4_Prx A*
13451287-C-G 11295611-C-G A*
20649306-A-T 18487420-A-T P4_Prx A*
27762812-C-T 25616665-C-T P1_Y2 A*
2859831-C-T 2991790-C-T Y38479 YY++
23590780-CA-C 21428894-CA-C 9×A++
9414738-G-A 9577129-G-A Y40010 YY+**
17878633-G-T 15766753-G-T Y42254 YY++
17692978-G-A 15581098-G-A Y42152 YY++
3719525-T-C 3851484-T-C ****
22231361-G-C 20069475-G-C DYZ19 ****
22231233-T-G 20069347-T-G DYZ19 ****
10031219-A-G 10193610-A-G **
9640735-C-A 9803126-C-A IR3_Prx **
9996489-C-A 10158880-C-A **
9956686-GT-G 10119077-GT-G **
10656819-C-CATTGCATTCA **
10656832-T-TTAACTC **
9856020-C-A 10018411-C-A **
10656856-T-G **
10668588-C-G **
9645591-G-T 9807982-G-T IR3_Prx **
9644635-TG-T 9807026-TG-T IR3_Prx **
10677835-A-G **
10688647-C-A **
9641651-A-T 9804042-A-T IR3_Prx **
10015099-C-A 10177490-C-A **
9465911-G-T 9628302-G-T **
9604577-A-ATG 9766968-A-ATG IR3_Prx **
9125335-A-AGGGG **
8290621-C-A 8422580-C-A **
8326049-A-T 8458008-A-T **
8706978-A-G 8838937-A-G **
8811235-C-A 8943194-C-A **
8816511-C-T 8948470-C-T **
8856942-C-T 8988901-C-T **
8987591-C-A 9149982-C-A **
9602653-T-C 9765044-T-C IR3_Prx **
8994008-A-C 9156399-A-C **
9076919-A-G 9239310-A-G **
9400798-C-A 9563189-C-A **
9465903-A-T 9628294-A-T **
9465905-T-A 9628296-T-A **
10744985-C-T **
9529140-T-TTCCCC 9691531-T-TTCCCC **
10693599-C-T **
6880-C-A **
10748434-T-G **
11003097-C-G **
10939584-C-A **
10941614-T-G **
10946484-C-A **
10951779-C-A **
10960894-C-A **
10991987-G-T **
10992212-A-T **
10992214-T-TCCAGG **
11011868-T-A **
10895714-A-T **
11013920-C-T **
11018167-C-A **
11026898-C-G **
11029865-C-T **
13218964-CT-C 11063288-CT-C **
13227006-C-A 11071330-C-A **
13295569-G-T 11139893-G-T **
13329571-T-C 11173895-T-C **
13461602-C-A 11305926-C-A **
10938617-T-G **
10888798-ATCTCCATTTC-A **
7966517-C-A 8098476-C-A **
10795750-A-G **
10753102-C-T **
10756329-TTCTAC-T **
10760179-G-C **
10760184-CTGTTT-C **
10760204-C-CTGTTG **
10760250-C-A **
10767990-C-T **
10774819-C-A **
10795162-C-T **
10816500-T-A **
10885022-C-A **
10816621-C-A **
10828269-T-C **
10837025-C-A **
10837398-T-A **
10842708-T-A **
10847492-T-C **
10864704-A-G **
10865828-C-T **
10880777-C-A **
8167030-G-T 8298989-G-T **
7182082-G-A 7314041-G-A **
7522634-AGAAATTTATACT-A 7654593-AGAAATTTATACT-A **
3112155-C-A 3244114-C-A **
2795093-C-A 2927052-C-A Y81458 **
2984245-C-A 3116204-C-A **
2984320-C-A 3116279-C-A **
2984362-C-A 3116321-C-A **
3042311-G-T 3174270-G-T **
3062957-C-A 3194916-C-A **
3079359-C-A 3211318-C-A **
3130959-C-A 3262918-C-A **
22865242-C-A 20703356-C-A **
3131663-A-G 3263622-A-G **
3272072-A-T 3404031-A-T **
3272955-C-A 3404914-C-A **
3321288-G-T 3453247-G-T **
3592704-A-C 3724663-A-C **
3727371-G-T 3859330-G-T **
3775583-G-T 3907542-G-T **
3788736-G-T 3920695-G-T **
2770905-G-T 2902864-G-T **
28727853-C-A 26581706-C-A **
3912867-C-A 4044826-C-A **
10992204-C-T **
14538686-C-A 12426887-C-A **
10693602-C-G **
28024705-A-AC 25878558-A-AC P1_Y2 **
16029762-C-A 13917882-C-A **
11009204-C-A **
15410605-G-A 13298725-G-A **
21162946-C-A 19001060-C-A **
13486855-C-T 11331179-C-T **
17183484-C-A 15071604-C-A **
13486867-A-G 11331191-A-G **
13486869-G-T 11331193-G-T **
17369225-C-A 15257345-C-A **
15371037-C-A 13259157-C-A **
13857230-A-T 11736524-A-T **
4243265-C-A 4375224-C-A **
17568347-C-A 15456467-C-A **
7384598-C-A 7516557-C-A **
3852840-C-A 3984799-C-A **
4062036-G-T 4193995-G-T **
7470699-TC-T 7602658-TC-T IR1_L **
7013599-A-T 7145558-A-T 13×T**
6233727-C-CAT 6365686-C-CAT IR3_Dst **
6233752-AATGC-A 6365711-AATGC-A IR3_Dst **
6233759-A-C 6365718-A-C IR3_Dst **
6347522-G-T 6479481-G-T **
6631744-G-A 6763703-G-A **
6807834-C-A 6939793-C-A **
6992591-C-T 7124550-C-T **
7073067-CTT-C 7205026-CTT-C 10×T**
5934428-C-A 6066387-C-A **
7076169-A-G 7208128-A-G **
7146160-G-A 7278119-G-A **
7165907-G-T 7297866-G-T **
13466488-C-G 11310812-C-G **
7188186-A-T 7320145-A-T **
7248580-C-A 7380539-C-A **
7371592-G-T 7503551-G-T **
7373981-G-T 7505940-G-T **
6037641-GC-G 6169600-GC-G **
5926903-A-G 6058862-A-G **
4147474-T-A 4279433-T-A **
5524651-T-C 5656610-T-C **
4377541-G-T 4509500-G-T **
4503480-A-T 4635439-A-T **
4703093-T-TTTGG 4835052-T-TTTGG **
4778673-C-A 4910632-C-A **
4930931-C-A 5062890-C-A **
5059666-T-G 5191625-T-G **
5059680-C-CA 5191639-C-CA **
5519117-T-C 5651076-T-C **
5577265-C-A 5709224-C-A **
5815704-A-G 5947663-A-G **
5658871-C-A 5790830-C-A **
5684736-G-T 5816695-G-T **
5775457-C-A 5907416-C-A **
5785061-C-A 5917020-C-A **
5785624-C-A 5917583-C-A **
5785631-C-A 5917590-C-A **
5805408-G-T 5937367-G-T **
5805417-G-T 5937376-G-T **
13461631-C-A 11305955-C-A **
13571196-G-T 11415520-G-T **
13466492-G-T 11310816-G-T **
21747620-T-C 19585734-T-C **
21135065-A-G 18973179-A-G **
21146306-A-C 18984420-A-C **
21148867-TAA-T 18986981-TAA-T **
21187329-G-T 19025443-G-T **
21354126-A-C 19192240-A-C **
21354127-G-A 19192241-G-A **
21354131-T-A 19192245-T-A **
21787038-G-T 19625152-G-T **
21124472-C-A 18962586-C-A **
21816470-C-A 19654584-C-A **
21922128-A-T 19760242-A-T **
21946487-G-T 19784601-G-T **
22124109-T-C 19962223-T-C **
22541030-G-A 20379144-G-A **
22605281-T-A 20443395-T-A **
22649616-C-G 20487730-C-G **
22658509-C-A 20496623-C-A **
21135054-T-C 18973168-T-C **
20486478-G-A 18324592-G-A P5_Dst 8×A**
22782455-C-G 20620569-C-G **
19414962-G-T 17303082-G-T **
18793551-C-A 16681671-C-A **
18901920-C-A 16790040-C-A **
18985078-C-T 16873198-C-T **
19000296-G-T 16888416-G-T **
19078543-C-A 16966663-C-A **
19233989-T-A 17122109-T-A 8×A**
19358697-C-A 17246817-C-A **
19394220-A-G 17282340-A-G **
19425014-C-G 17313134-C-G **
20486472-A-AG 18324586-A-AG P5_Dst **
19558443-C-A 17446563-C-A **
19616186-A-AT 17504306-A-AT P5_Prx **
19887304-A-ACAGC 17775424-A-ACAGC P5_Prx **
20116698-T-TCTCCC 18004818-T-TCTCCC P5_Dst 10×C**
20243484-C-CAAG 18081598-C-CAAG P5_Dst **
20243495-C-A 18081609-C-A P5_Dst **
20430444-A-AC 18268558-A-AC P5_Dst **
20486465-A-G 18324579-A-G P5_Dst **
22661944-C-A 20500058-C-A **
22802864-A-C 20640978-A-C **
18724052-T-G 16612172-T-G **
28563162-G-T 26417015-G-T **
27947642-AC-A 25801495-AC-A P1_Y2 **
27991207-A-ACC 25845060-A-ACC P1_Y2 **
28024693-A-G 25878546-A-G P1_Y2 **
28024703-T-C 25878556-T-C P1_Y2 **
28027193-A-AGC 25881046-A-AGC P1_Y2 **
28361462-C-CTTT 26215315-C-CTTT P1_gr2 8×T**
28534598-G-T 26388451-G-T **
28768313-T-C 26622166-T-C **
27484346-T-A 25338199-T-A P1_Y2 **
28801780-T-C 26655633-T-C **
56763577-G-T **
56836164-T-C **
56838315-T-C **
56858761-A-G **
56869701-A-G **
56880018-G-T **
56880048-C-A **
27947635-C-T 25801488-C-T P1_Y2 **
26073037-G-T 23926890-G-T P1_Y1 **
22855011-G-T 20693125-G-T **
23352216-T-A 21190330-T-A **
22893559-C-A 20731673-C-A **
22893563-A-T 20731677-A-T **
22893570-C-T 20731684-C-T **
22936391-C-A 20774505-C-A **
23058572-C-A 20896686-C-A **
23062275-C-A 20900389-C-A **
23186559-C-A 21024673-C-A **
23253187-T-A 21091301-T-A **
23420592-G-GCC 21258706-G-GCC **
26018422-TG-T 23872275-TG-T P1_Y1 **
23876080-C-A 21714194-C-A **
21752169-G-T **
24264736-A-G 22118589-A-G P3_b1 9×AC**
24405303-G-A 22259156-G-A **
24485333-C-A 22339186-C-A **
24614414-A-AC 22468267-A-AC P3_t2 **
26018409-GT-G 23872262-GT-G P1_Y1 **
26018415-G-GTTT 23872268-G-GTTT P1_Y1 **
18763605-T-A 16651725-T-A **
18682857-C-A 16570977-C-A **
13486844-G-C 11331168-G-C **
14608277-G-C 12496479-G-C **
14347940-G-T 12227235-G-T **
14355026-C-A 12234321-C-A **
14519602-A-G 12407803-A-G **
14530333-G-T 12418534-G-T **
14568691-C-A 12456891-C-A **
14592094-A-T 12480294-A-T **
14608215-G-C 12496417-G-C **
14671488-G-T 12559554-G-T **
14224432-A-AG 12103726-A-AG **
14735086-T-C 12623154-T-C **
14762507-A-AAT 12650576-A-AAT **
14766630-T-C 12654699-T-C **
14831783-G-A 12719850-G-A **
14912908-C-A 12800975-C-A **
15051308-A-G 12939399-A-G **
15190018-G-T 13078104-G-T **
15190037-G-T 13078123-G-T **
14255056-C-A 12134350-C-A **
13993520-C-A 11872814-C-A **
15212356-A-T 13100442-A-T **
13857210-C-T 11736504-C-T **
13514883-C-T 11359207-C-T **
13514890-G-GC 11359214-G-GC **
13514894-A-G 11359218-A-G 11×G**
10656834-T-A **
13592629-C-A 11436953-C-A **
11666492-G-A **
11677182-G-T **
13854278-G-T 11733572-G-T **
13857216-C-G 11736510-C-G **
13939050-A-G 11818344-A-G **
13857218-G-A 11736512-G-A **
13857237-G-C 11736531-G-C **
13857240-T-A 11736534-T-A **
13857250-T-TCAACC 11736544-T-TCAACC **
13857254-A-G 11736548-A-G **
13858749-G-A 11738043-G-A **
13858883-C-A 11738177-C-A **
13885767-C-A 11765061-C-A **
15210855-G-T 13098941-G-T **
15215548-G-T 13103634-G-T **
18670273-T-C 16558393-T-C **
17302111-T-G 15190231-T-G **
16943456-A-G 14831576-A-G **
16943476-A-T 14831596-A-T **
16952938-C-T 14841058-C-T **
17191678-T-C 15079798-T-C **
17191686-A-C 15079806-A-C **
17191707-C-CAA 15079827-C-CAA **
17297479-C-A 15185599-C-A **
17302123-T-C 15190243-T-C **
16489866-A-T 14377986-A-T **
17522864-C-A 15410984-C-A **
17534568-A-G 15422688-A-G **
17567718-C-A 15455838-C-A **
17601364-C-A 15489484-C-A Y99682 **
18055067-A-C 15943187-A-C **
18443596-T-C 16331716-T-C P6_Dst **
18487639-C-CCA 16375759-C-CCA P6_Dst **
18605297-C-A 16493417-C-A **
16933014-C-T 14821134-C-T **
16320825-G-T 14208945-G-T **
15258553-C-A 13146637-C-A **
15496806-C-G 13384926-C-G **
15322459-T-A 13210577-T-A **
15377318-C-A 13265438-C-A **
15406933-C-G 13295053-C-G **
15410624-A-G 13298744-A-G **
15410632-TC-A 13298752-TC-A **
15468666-T-G 13356786-T-G **
15468669-C-A 13356789-C-A **
15496801-C-T 13384921-C-T **
15606991-C-A 13495111-C-A **
16308227-C-A 14196347-C-A **
15690117-A-G 13578237-A-G **
15866699-C-A 13754819-C-A **
15881849-A-ACC 13769969-A-ACC **
15909338-G-T 13797458-G-T **
15954251-ATGCCT-A 13842371-ATGCCT-A **
15985377-C-A 13873497-C-A **
16048128-C-A 13936248-C-A **
16261122-C-A 14149242-C-A **
13800938-A-G 11680232-A-G **
13963478-C-A 11842772-C-A **
10964169-C-T **
5242502-G-GTA 5374461-G-GTA **
11026063-C-CATTCT **
10842500-A-T **
11027274-G-A **
10945149-TC-T **
19183814-CTT-C 17071934-CTT-C 28×T**
17675536-G-A 15563656-G-A **
14900672-G-T 12788739-G-T **
10668627-A-C **
10668607-G-T **
25524734-A-T 23378587-A-T P1_gr1 **
14900679-A-G 12788746-A-G **
11030243-C-T **
10687317-C-T **
28757888-C-A 26611741-C-A **
6368958-G-T 6500917-G-T **
13394838-T-G 11239162-T-G **
13945252-C-A 11824546-C-A **
10964154-T-A **
13480543-C-G 11324867-C-G **
10778703-C-A **
2925592-C-CT 3057551-C-CT 15×T**
7977228-G-GA 8109187-G-GA 10×A**
11026087-C-G **
13486854-G-T 11331178-G-T **
6310843-C-A 6442802-C-A IR3_Dst **
26199612-TG-T 24053465-TG-T P1_Y1 **
10687332-A-C **
10993044-C-A **
11001485-A-C **
21446241-G-T 19284355-G-T **
19226070-C-A 17114190-C-A **
10778714-C-A **
10687298-C-A **
20579334-C-A 18417448-C-A P5_Dst **
7464063-G-T 7596022-G-T IR1_L **
10994338-A-G **
17310904-C-T 15199024-C-T **
15777171-C-A 13665291-C-A **
15051303-A-T 12939394-A-T **
14735089-G-A 12623157-G-A **
10759795-C-G **
8842346-C-A 8974305-C-A **
13461408-A-G 11305732-A-G **
10993068-C-A **
10993031-A-C **
11018784-C-A **
10656845-T-C **
28633530-C-A 26487383-C-A **
14422212-C-A 12301487-C-A **
13461091-A-T 11305415-A-T **
10989156-C-G **
9836888-GTTTT-G 9999279-GTTTT-G 20×T**
9968339-GTTT-G 10130730-GTTT-G 15×T**
21714011-C-A 19552125-C-A **
13461416-G-A 11305740-G-A **
10945197-A-T **
10958831-C-A **
10760232-C-A **
5658904-T-G 5790863-T-G **
59026162-G-T 56880015-G-T **
59015862-T-C 56869715-T-C **
13857246-A-G 11736540-A-G **
5658903-C-T 5790862-C-T **
59028098-C-T 56881951-C-T **
21146297-C-A 18984411-C-A **
18908110-GTA-G 16796230-GTA-G **
17904069-G-T 15792189-G-T 11×T**
17675540-AG-A 15563660-AG-A **
15742130-C-A 13630250-C-A CTS4637 **
15279220-G-T 13167319-G-T 9×T**
13514836-A-C 11359160-A-C **
5415318-CTATG-C 5547277-CTATG-C **
15410615-C-A 13298735-C-A **
13486870-A-T 11331194-A-T **
58982291-G-T 56836144-G-T **
21134322-AAAAC-A 18972436-AAAAC-A 4×AAAC**
13514851-G-A 11359175-G-A **
4503511-A-AT 4635470-A-AT 14×T**
22147834-C-A 19985948-C-A **
13800945-C-T 11680239-C-T **
9646980-T-C 9809371-T-C YSC0000083 SA27 IR3_Prx **
17559790-G-A 15447910-G-A CTS7605 PF3764 Z2656 **
13800941-A-T 11680235-A-T **
26060211-T-A 23914064-T-A P1_Y1 **
13800963-C-G 11680257-C-G **
5785598-C-A 5917557-C-A **
13480530-T-C 11324854-T-C **
10945154-C-T **
10805430-G-C **
10668648-T-C **
10655210-A-AC **
10655199-G-C **
10655179-G-C **
10655175-A-T **
10655174-C-T **
10655173-C-T **
10655172-G-T **
10655164-T-C **
10655161-A-C **
11019385-A-C **
11026079-A-C **
10805423-T-C **
17584156-TG-T 15472276-TG-T **
10805401-T-C **
10805397-T-C **
19110961-C-A 16999081-C-A **
25954178-C-T 23808031-C-T P1_Y1 **
4982523-A-AT 5114482-A-AT 23×T**
21135058-A-T 18973172-A-T **
7341310-CT-C 7473269-CT-C 12×T**
6400951-C-A 6532910-C-A **
22167352-C-T 20005466-C-T Y57710 **
13466482-G-A 11310806-G-A **
13480547-G-A 11324871-G-A **
16692116-CCAA-C 14580236-CCAA-C **
10964144-CGGCAG-C **
21125705-C-A 18963819-C-A **
22167342-C-G 20005456-C-G **
14715324-GT-G 12603391-GT-G **
28716280-C-A 26570133-C-A **
10970643-A-T **
27947647-A-AC 25801500-A-AC P1_Y2 **
7384654-C-A 7516613-C-A **
17014688-C-A 14902808-C-A **
16765539-C-A 14653659-C-A **
9942093-G-T 10104484-G-T **
26391570-G-T 24245423-G-T P1_Y1 **
13486852-A-T 11331176-A-T **
7008691-T-A 7140650-T-A **
15077953-C-A 12966043-C-A **
6541372-C-A 6673331-C-A **
24212252-G-T 22066105-G-T P3_b1 **
4254826-C-A 4386785-C-A **
19754877-G-T 17642997-G-T P5_Prx **
56841346-A-C **
11028198-T-G **
22722379-G-C 20560493-G-C **
10980526-C-A **
21133555-TCA-T 18971669-TCA-T **
23435711-A-G 21273825-A-G **
15332377-C-A 13220495-C-A **
10801782-A-G **
10868529-C-T **
10868504-C-T **
8844431-C-A 8976390-C-A **
16829871-C-A 14717991-C-A **
7304383-C-A 7436342-C-A **
20849711-A-ACCC 18687825-A-ACCC P4_Dst **
19860857-T-TG 17748977-T-TG P5_Prx **
10964111-T-C **
10964103-T-A **
15495124-C-A 13383244-C-A **
10989169-C-A **
18745855-AT-A 16633975-AT-A **
3279574-C-T 3411533-C-T **
17191698-TA-T 15079818-TA-T **
11016304-C-T **
23145909-C-A 20984023-C-A **
9967021-C-A 10129412-C-A **
15538058-T-TA 13426178-T-TA **
22575062-C-A 20413176-C-A **
10760191-G-T **
13997572-C-A 11876866-C-A **
18769925-C-A 16658045-C-A **
14766651-T-A 12654720-T-A **
18386554-C-A 16274674-C-A P6_Gap **
18022487-C-A 15910607-C-A **
7172413-G-T 7304372-G-T **
10693643-C-T **
10693630-T-C **
26391577-C-A 24245430-C-A P1_Y1 **
8501743-TTCC-T 8633702-TTCC-T **
22167351-A-G 20005465-A-G **
7083065-C-A 7215024-C-A Y37154 **
19107372-C-A 16995492-C-A **
10783808-C-A **
13412043-C-A 11256367-C-A **
20849708-CA-C 18687822-CA-C P4_Dst **
15406937-C-T 13295057-C-T **
10778811-C-T **
18859145-GC-G 16747265-GC-G **
7223111-C-A 7355070-C-A **
14235974-C-A 12115268-C-A **
9424528-C-A 9586919-C-A **
15740544-C-A 13628664-C-A **
6919748-C-A 7051707-C-A **
9700735-C-A 9863126-C-A IR3_Prx **
14735097-T-C 12623165-T-C **
17445474-C-A 15333594-C-A **
10977403-T-A **
10860489-G-T **
22722384-G-T 20560498-G-T **
8403270-TG-T 8535229-TG-T **
7861900-G-T 7993859-G-T **
23435705-A-G 21273819-A-G **
7018972-C-A 7150931-C-A **
16703659-G-T 14591779-G-T **
15190034-A-T 13078120-A-T **
10774988-C-T **
9371500-ATG-A 9533891-ATG-A **
10682858-T-C **
10988744-C-A **
10760201-T-G **
13461095-G-T 11305419-G-T **
9942082-A-G 10104473-A-G **
10761633-C-A **
18990264-C-A 16878384-C-A **
21162960-C-A 19001074-C-A **
3279563-A-T 3411522-A-T **
10964166-G-A **
4552955-G-T 4684914-G-T **
10761265-A-T **
10888619-A-T **
10964151-C-T **
15503477-C-A 13391597-C-A **
10856581-C-A **
10930764-C-T **
10682831-T-A **
10969819-C-A **
10778751-C-A **
13140218-T-C 10629704-T-C ***
22510612-G-A 20348726-G-A DYZ19 ***
22722362-TG-T 20560476-TG-T ***
13869401-T-A 11748695-T-A ***
13867912-G-GA 11747206-G-GA ***
22295984-C-T 20134098-C-T DYZ19 ***
13455536-C-T 11299860-C-T Z25055 ***
13664691-A-C 11509015-A-C ***
13452399-A-T 11296723-A-T ***
28807630-T-C 26661483-T-C BY27886 ***
13839858-A-T 11719152-A-T ***
28808749-A-T 26662602-A-T PF1351 ***
13705016-A-G 11549340-A-G ***
21924154-A-T 19762268-A-T ***
28809111-A-T 26662964-A-T BY27892 ***
13862132-A-G 11741426-A-G ***
58973862-T-G 56827715-T-G ***
13449392-T-G 11293716-T-G ***
58973867-T-A 56827720-T-A ***
13661987-C-A 11506311-C-A ***
13661989-C-G 11506313-C-G ***
18872154-CTTT-C 16760274-CTTT-C ***
18872159-TC-T 16760279-TC-T ***
24300838-TG-T 22154691-TG-T P3_t1 ***
25983813-CAA-C 23837666-CAA-C P1_Y1 14×A***
13680928-G-A 11525252-G-A ***
13406158-T-A 11250482-T-A ***
22147861-T-C 19985975-T-C ***
13869414-G-A 11748708-G-A ***
13862150-G-T 11741444-G-T ***
13862145-A-AGAATG 11741439-A-AGAATG ***
24830463-C-A 22684316-C-A P3_b2 ***
13662002-C-A 11506326-C-A ***
26229943-CT-C 24083796-CT-C P1_Y1 11×T***
13869426-A-ATCGTT 11748720-A-ATCGTT ***
13869408-T-A 11748702-T-A ***
23396094-G-A 21234208-G-A ***
58979098-T-C 56832951-T-C ***
28812617-G-C 26666470-G-C A4534 ***
18355098-AT-A 16243218-AT-A P6_Prx 10×T***
8644356-ACAG-A 8776315-ACAG-A ***
13448320-C-A 11292644-C-A ***
13855598-A-C 11734892-A-C ***
13862155-G-C 11741449-G-C ***
20757357-TTTACA-T 18595471-TTTACA-T P4_Prx ***
24312298-T-TA 22166151-T-TA P3_t1 14×A***
13662017-C-A 11506341-C-A ***
28784396-GAGTGGAATGT-G 26638249-GAGTGGAATGT-G ***
13867555-A-T 11746849-A-T ***
10016766-T-A 10179157-T-A ***
13865750-G-A 11745044-G-A ***
22934136-C-A 20772250-C-A ***
13865748-TG-T 11745042-TG-T ***
28790453-G-A 26644306-G-A ***
13862156-G-A 11741450-G-A ***
13862131-G-C 11741425-G-C ***
13510967-T-C 11355291-T-C ***
58975697-C-T 56829550-C-T ***
13862190-C-A 11741484-C-A ***
24811214-C-A 22665067-C-A P3_b2 ***
13860209-G-C 11739503-G-C ***
21079520-C-A 18917634-C-A ***
26604830-C-CT 24458683-C-CT P1_g2 14×T***
58982290-T-C 56836143-T-C ***
9057105-C-G ***
13868409-C-CGGAAT,T 11747703-C-CGGAAT,T 10×GGAAT***
10746969-A-G ***
22815505-G-T 20653619-G-T 20×T***
22815503-C-G 20653617-C-G ***
23775443-G-T 21613557-G-T ***
56830311-G-C ***
22115468-G-T 19953582-G-T ***
15097814-TTTA-T 12985902-TTTA-T 6×TTA***
7636589-C-A 7768548-C-A ***
3990663-T-C 4122622-T-C ***
13862481-C-A 11741775-C-A ***
15161350-C-A 13049436-C-A ***
7361449-CA-C,CAA 7493408-CA-C,CAA 17×A***
10977079-A-T ***
3627493-C-A 3759452-C-A ***
4862666-C-A 4994625-C-A PR4371 ***
7167265-T-C 7299224-T-C ***
11009861-G-T ***
22447709-C-T 20285823-C-T DYZ19 ***
19492889-C-A 17381009-C-A ***
13466494-T-A 11310818-T-A ***
20723277-C-CTT 18561391-C-CTT P4_Prx 15×T***
14102508-C-G 11981802-C-G ***
56834828-A-G,T ***
19333251-G-T 17221371-G-T ***
14298151-A-G 12177445-A-G ***
22812681-T-C 20650795-T-C ***
13447128-A-T 11291452-A-T ***
10944571-G-C ***
56836582-C-G ***
13453225-AAT-A 11297549-AAT-A ***
13842621-A-C,T 11721915-A-C,T ***
13453198-CGGGTT-C 11297522-CGGGTT-C ***
13693775-A-G 11538099-A-G ***
13811028-G-A 11690322-G-A ***
25247639-AC-A 23101492-AC-A P2_r1 ***
19634281-TA-T 17522401-TA-T P5_Prx ***
16945899-G-A 14834019-G-A 9×A***
16406851-C-T 14294971-C-T ***
15324344-TGTA-T 13212462-TGTA-T ***
13860143-C-A,T 11739437-C-A,T ***
13453961-C-T 11298285-C-T Z15485 ***
58822232-G-C 56768639-C-G ***
9300188-TA-T 9462579-TA-T 10×A***
13489615-A-AC 11333939-A-AC ***
21838971-G-GAA 19677085-G-GAA 20×A***
13869400-A-G 11748694-A-G ***
58973871-T-C 56827724-T-C ***
9978135-G-A 10140526-G-A ***
26199599-T-TTA 24053452-T-TTA P1_Y1 ***
58973865-G-C 56827718-G-C ***
16730025-T-C 14618145-T-C ***
15928397-TG-T 13816517-TG-T ***
16301002-G-T 14189122-G-T 18×A***
21091071-T-A 18929185-T-A Y635 ***
21690909-CAAA-C 19529023-CAAA-C 14×A***
16644838-G-A 14532958-G-A ***
23452-C-A ***
7075240-CAAA-C 7207199-CAAA-C 17×A***
10993033-C-T ***
11030204-A-T ***
13704946-CGAA-C 11549270-CGAA-C ***
7970899-C-A 8102858-C-A ***
16345600-GA-G 14233720-GA-G 11×A***
17983719-C-A 15871839-C-A ***
9423975-G-GA 9586366-G-GA 11×A***
13705022-G-A 11549346-G-A ***
13455671-T-C 11299995-T-C ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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