Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > M222 > FGC4077

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
GR4NN
17722150-G-T 15610270-G-T FGC4086 YY+
18909084-G-A 16797204-G-A FGC50102 YY+
7527865-C-T 7659824-C-T FGC50095 YY+
19405213-G-C 17293333-G-C FGC50103 YY+
13840541-G-A 11719835-G-A FGC50097 +
14534561-G-T 12422762-G-T FGC50099 YY+
4992833-C-T 5124792-C-T FGC50092 +
14377076-G-T 12256372-G-T FGC50098 YY+
7555343-C-T 7687302-C-T FGC50096 YY+
15727007-C-T 13615127-C-T FGC50100 YY+
22774245-A-C 20612359-A-C FGC50106 YY+
22625938-C-T 20464052-C-T FGC4096 YY+
5439314-G-T 5571273-G-T FGC50093 +
28645756-A-G 26499609-A-G Z25457 FGC4076 +
4755206-C-T 4887165-C-T Z13641 *
6931087-C-T 7063046-C-T FGC50094 YY*
15958060-G-T 13846180-G-T FGC50101 Y*
18569774-C-T 16457894-C-T CTS8941 YY*
21209039-A-G 19047153-A-G FGC50104 YY*
3916021-A-T 4047980-A-T FGC50091 *
21958456-G-T 19796570-G-T FGC50105 Y*
2676386-T-C 2808345-T-C **
19112538-C-CCCTT 17000658-C-CCCTT 7×CCTT**
19284019-G-GTATGC 17172139-G-GTATGC 10×TATGC**
59004184-C-A 56858037-C-A **
17013723-T-C 14901843-T-C **
23437955-ATG-A 21276069-ATG-A 14×TG**
59013500-T-C 56867353-T-C **
13884278-C-A 11763572-C-A **
6346302-G-A 6478261-G-A **
6730318-T-C 6862277-T-C **
5241786-T-C 5373745-T-C 16×AC**
13296979-G-T 11141303-G-T **
13266418-C-T 11110742-C-T **
13354869-A-AAAT 11199193-A-AAAT **
59028807-A-G 56882660-A-G **
59016539-G-A 56870392-G-A **
59012541-G-A 56866394-G-A **
4277234-C-T 4409193-C-T **
2934251-C-A 3066210-C-A **
22852294-G-A 20690408-G-A **
4975960-C-T 5107919-C-T **
3405697-A-G 3537656-A-G **
21942082-T-A 19780196-T-A **
21672873-A-G 19510987-A-G **
3920793-T-G 4052752-T-G **
21555409-A-G 19393523-A-G **
26444094-G-T 24297947-G-T FGC47365 P1_Y1 **
4351903-T-C 4483862-T-C **
59012574-G-A 56866427-G-A **
4453626-C-T 4585585-C-T **
19230548-G-C 17118668-G-C **
4975963-G-A 5107922-G-A A3676 **
5007680-C-G 5139639-C-G **
58976264-C-A 56830117-C-A **
18630216-T-A 16518336-T-A **
59014251-A-G 56868104-A-G **
59014226-C-T 56868079-C-T **
59014206-A-C 56868059-A-C **
59012994-A-C 56866847-A-C **
13291023-C-T 11135347-C-T **
13708231-A-T 11552555-A-T **
13272739-T-C 11117063-T-C **
13269202-T-G 11113526-T-G **
5862505-T-G 5994464-T-G **
4328987-G-C 4460946-G-C **
3064831-A-G 3196790-A-G **
5346098-A-G 5478057-A-G **
8296038-A-G 8427997-A-G **
13909304-CAAA-C 11788598-CAAA-C 18×A***
16666079-ATT-A 14554199-ATT-A 25×T***
5862541-T-C 5994500-T-C **
14873038-C-A 12761108-C-A **
13138799-T-A 10628285-T-A **
13278845-C-A 11123169-C-A **
9850809-A-G 10013200-A-G 7399649-C-T 8013550-C-AF1621 M8568 **
9850801-C-A 10013192-C-A 8013550-C-AF3906 M8567 **
9764343-AAAGG-A 9926734-AAAGG-A 10×AAGG**
13628169-C-T 11472493-C-T **
5862533-T-G 5994492-T-G **
2676385-A-G 2808344-A-G **
6414897-T-C 6546856-T-C **
13259717-A-G 11104041-A-G **
13269165-A-G 11113489-A-G **
13259744-G-T 11104068-G-T **
21152253-G-A 18990367-G-A ***
21558700-A-T 19396814-A-T 10×T***
21793859-A-G 19631973-A-G ***
21793848-T-G 19631962-T-G ***
16607546-T-A 14495666-T-A ***
14566629-G-T 12454829-G-T ***
14661536-T-A 12549601-T-A ***
21151799-G-A 18989913-G-A ***
16778035-T-C 14666155-T-C ***
14693689-T-G 12581755-T-G ***
21550191-G-T 19388305-G-T ***
21793870-C-G 19631984-C-G ***
14693668-T-C 12581734-T-C ***
14693669-G-A 12581735-G-A ***
14693670-C-A 12581736-C-A ***
14693681-A-G 12581747-A-G ***
21175735-A-G 19013849-A-G ***
21443144-G-T 19281258-G-T ***
16641852-T-A 14529972-T-A ***
16726461-G-A 14614581-G-A ***
22236931-C-G 20075045-C-G DYZ19 ***
22354969-G-A 20193083-G-A DYZ19 ***
22342607-T-G 20180721-T-G DYZ19 ***
22325184-T-A 20163298-T-A DYZ19 ***
22236969-T-A 20075083-T-A DYZ19 ***
22236968-C-T 20075082-C-T DYZ19 ***
22236949-A-T 20075063-A-T DYZ19 ***
16682658-A-C 14570778-A-C ***
13701921-A-T 11546245-A-T ***
20920846-T-C 18758960-T-C P4_Dst ***
22236283-G-A 20074397-G-A DYZ19 ***
14153065-A-G 12032359-A-G ***
14158832-T-A 12038126-T-A ***
22236279-C-T 20074393-C-T DYZ19 ***
14252260-T-A 12131554-T-A ***
22198944-T-A 20037058-T-A ***
22166532-C-T 20004646-C-T ***
22029702-C-A 19867816-C-A ***
21125694-G-A 18963808-G-A ***
14754231-G-A 12642300-G-A ***
20612635-C-A 18450749-C-A P4_Prx ***
18101172-A-G 15989292-A-G ***
18354160-G-T 16242280-G-T P6_Prx ***
15645484-A-G 13533604-A-G ***
18291029-A-C 16179149-A-C P6_Prx ***
18290913-T-C 16179033-T-C P6_Prx ***
15675887-A-C 13564007-A-C ***
17321197-G-T 15209317-G-T ***
15675943-C-T 13564063-C-T ***
17951135-A-G 15839255-A-G ***
15532305-C-A 13420425-C-A ***
17467055-C-A 15355175-C-A ***
17865318-T-C 15753438-T-C ***
17756794-A-G 15644914-A-G ***
15683628-C-A 13571748-C-A 24×A***
15797154-A-C 13685274-A-C ***
17533825-A-G 15421945-A-G ***
15969627-T-A 13857747-T-A ***
17539020-G-A 15427140-G-A ***
15566816-G-A 13454936-G-A ***
15342185-A-T 13230304-A-T ***
17618084-C-T 15506204-C-T ***
19095030-A-T 16983150-A-T ***
19289516-T-C 17177636-T-C ***
14765708-C-T 12653777-C-T ***
19095046-A-G 16983166-A-G ***
16964261-A-G 14852381-A-G ***
14874544-G-C 12762614-G-C ***
16996670-G-T 14884790-G-T ***
15122138-A-C 13010225-A-C ***
16528951-C-G 14417071-C-G ***
15332404-A-G 13220522-A-G ***
15169885-G-A 13057971-G-A ***
15174430-A-G 13062516-A-G ***
18850283-T-A 16738403-T-A ***
18796449-C-T 16684569-C-T ***
18780641-C-A 16668761-C-A ***
15187453-C-A 13075539-C-A ***
16085904-G-A 13974024-G-A ***
15187461-T-C 13075547-T-C ***
18993560-T-A 16881680-T-A ***
24658153-G-T 22512006-G-T P3_b2 ***
22360948-A-T 20199062-A-T DYZ19 ***
2730092-A-ATT 2862051-A-ATT 17×T***
13110566-GCTG-ACTC 10600052-GCTG-ACTC ***
9771940-CTT-C 9934331-CTT-C 18×T***
9507982-CTTT-C 9670373-CTTT-C 34×T***
7921998-AT-A 8053957-AT-A ***
7424513-G-GA 7556472-G-GA ***
5431534-TTA-T 5563493-TTA-T ***
5097348-CT-C 5229307-CT-C 26×T***
4975960-CGTG-TGTA 5107919-CGTG-TGTA ***
4450612-TGCA-T 4582571-TGCA-T ***
3081805-TAAATAGCA-T 3213764-TAAATAGCA-T ***
2835680-GCTGTAAC-ACTGCAAG 2967639-GCTGTAAC-ACTGCAAG ***
2676385-AT-GC 2808344-AT-GC ***
13448203-T-TCCATTCCATTCCATC 11292527-T-TCCATTCCATTCCATC ***
7009187-CTT-C 7141146-CTT-C 19×T***
2805529-CAA-C 2937488-CAA-C 22×A***
13110553-CAG-TAT 10600039-CAG-TAT ***
17085721-C-CT 14973841-C-CT 20×T***
5062473-C-CA 5194432-C-CA 21×A***
13944051-CAA-C 11823345-CAA-C 22×A***
3039839-CT-C 3171798-CT-C 22×T***
5588594-T-TA 5720553-T-TA 15×A***
25606422-CA-C 23460275-CA-C P1_gr1 17×A***
9403521-GT-G 9565912-GT-G 21×T***
17030781-TGTA-T 14918901-TGTA-T ***
3922183-G-GA 4054142-G-GA 16×A***
13138666-TC-CT 10628152-TC-CT ***
13448322-T-TTCCACACCATTCCAC 11292646-T-TTCCACACCATTCCAC ***
22598745-C-CA 20436859-C-CA 15×A***
21425339-CTT-C 19263453-CTT-C 24×T***
58982934-TCCAT-CCCAG 56836787-TCCAT-CCCAG ***
58982890-AAATTC-CTATTT 56836743-AAATTC-CTATTT ***
58982881-TAC-AAT 56836734-TAC-AAT ***
58982848-GC-CA 56836701-GC-CA ***
58980343-GTGA-TTGG 56834196-GTGA-TTGG ***
58979988-ATC-GCT 56833841-ATC-GCT ***
58858875-TCCATT-C 56731991-AATGGA-G ***
28517963-CA-C 26371816-CA-C 11×A***
22768819-CTT-C 20606933-CTT-C 20×T***
22360984-AC-CT 20199098-AC-CT DYZ19 ***
22360966-AA-CC 20199080-AA-CC DYZ19 ***
22236279-CTCTG-TTCTA 20074393-CTCTG-TTCTA DYZ19 ***
21339379-TCA-T 19177493-TCA-T ***
13449316-A-ATTCCTTTCCCTTCCC 11293640-A-ATTCCTTTCCCTTCCC ***
21132699-TG-T 18970813-TG-T ***
19393098-CT-C 17281218-CT-C 30×T***
19112555-C-CCTTT 17000675-C-CCTTT ***
18227549-GTTTTT-G 16115669-GTTTTT-G 14×T***
17361057-TCAA-T 15249177-TCAA-T ***
16573009-ATAC-A 14461129-ATAC-A ***
14847003-CCAA-C 12735069-CCAA-C ***
14693668-TGC-CAA 12581734-TGC-CAA ***
14492793-C-CTT 12380990-C-CTT 15×T***
13805392-GAAAT-CAACG 11684686-GAAAT-CAACG ***
13706085-TATGGCG-AATGCAT 11550409-TATGGCG-AATGCAT ***
13471840-ACT-GCC 11316164-ACT-GCC ***
6604084-C-CT 6736043-C-CT 17×T***
16371118-A-AT 14259238-A-AT 15×T***
22360984-A-C 20199098-A-C DYZ19 ***
23829384-C-A 21667498-C-A ***
26598399-A-G 24452252-A-G P1_g2 ***
26260938-A-G 24114791-A-G P1_Y1 ***
26205095-C-T 24058948-C-T P1_Y1 ***
26089608-C-T 23943461-C-T P1_Y1 ***
25709345-A-T 23563198-A-T P1_b3 ***
25592704-G-A 23446557-G-A P1_gr1 ***
25027124-T-C 22880977-T-C g1 ***
24893047-C-A 22746900-C-A g1 ***
13565960-C-G 11410284-C-G ***
24373231-T-C 22227084-T-C ***
24185656-C-A 22039509-C-A P3_b1 ***
23642552-A-C 21480666-A-C ***
26908425-C-T 24762278-C-T P1_r3 ***
23431440-A-G 21269554-A-G ***
23392037-T-G 21230151-T-G ***
23172313-C-A 21010427-C-A ***
23045410-G-A 20883524-G-A ***
22914418-T-G 20752532-T-G ***
22652961-C-T 20491075-C-T ***
22501802-G-A 20339916-G-A DYZ19 ***
22491450-G-T 20329564-G-T DYZ19 ***
22367347-G-A 20205461-G-A DYZ19 ***
22364404-C-A 20202518-C-A DYZ19 ***
22361612-C-T 20199726-C-T DYZ19 ***
22360985-C-T 20199099-C-T DYZ19 ***
26746361-G-C 24600214-G-C P1_g2 ***
27053924-G-T 24907777-G-T P1_r4 ***
6541475-CAGAG-C 6673434-CAGAG-C 17×AG***
58913027-A-T 56677844-T-A ***
58991865-G-T 56845718-G-T ***
58990019-C-A 56843872-C-A ***
58989988-G-A 56843841-G-A ***
58989983-A-G 56843836-A-G ***
58986814-T-C 56840667-T-C ***
58982895-C-T 56836748-C-T ***
58982887-A-G 56836740-A-G ***
58980058-A-T 56833911-A-T ***
58980027-C-A 56833880-C-A ***
58979988-A-G 56833841-A-G ***
58977079-G-C 56830932-G-C ***
58968298-A-T 56822151-A-T ***
58901579-A-T 56689292-T-A ***
27481854-G-T 25335707-G-T P1_Y2 ***
58890836-G-A 56700035-C-T ***
28818244-A-T 26672097-A-T ***
28818242-A-C 26672095-A-C ***
28818237-A-T 26672090-A-T ***
28721487-G-A 26575340-G-A ***
28717420-T-C 26571273-T-C ***
28540074-T-G 26393927-T-G ***
28519501-T-C 26373354-T-C ***
28508083-C-T 26361936-C-T ***
28237989-G-A 26091842-G-A P1_b4 ***
28162912-A-G 26016765-A-G P1_b4 ***
28063788-G-T 25917641-G-T P1_Y2 ***
13576724-C-T 11421048-C-T ***
8085799-G-A 8217758-G-A ***
13541861-A-T 11386185-A-T ***
59004901-G-A 56858754-G-A ***
2676359-G-T 2808318-G-T ***
22322148-A-C 20160262-A-C DYZ19 ***
22322097-CC-AA 20160211-CC-AA DYZ19 ***
22322088-TT-GA 20160202-TT-GA DYZ19 ***
58906772-CCAA-TCAG 56684096-TTGG-CTGA ***
5886175-CT-C 6018134-CT-C 19×T***
9940742-TAG-CAA 10103133-TAG-CAA ***
22502187-C-A 20340301-C-A DYZ19 ***
59027886-G-A 56881739-G-A ***
59024426-G-T 56878279-G-T ***
59019460-G-A 56873313-G-A ***
22433022-T-G 20271136-T-G DYZ19 ***
18354162-A-G 16242282-A-G P6_Prx ***
21946433-G-A 19784547-G-A 11×A***
9941783-A-G 10104174-A-G ***
9941770-T-C 10104161-T-C ***
9732725-G-A 9895116-G-A FGC6327 IR3_Prx ***
8085787-T-G 8217746-T-G ***
7282251-C-A 7414210-C-A CTS1225 ***
4505414-ATT-A 4637373-ATT-A 22×T***
22500990-G-T 20339104-G-T DYZ19 ***
4707512-CA-C 4839471-CA-C 18×A***
13569676-GC-TG 11414000-GC-TG ***
59027809-G-A 56881662-G-A ***
5267536-AT-A 5399495-AT-A 22×T***
19333229-A-AT 17221349-A-AT 21×T***
58982751-ATCCAT-A 56836604-ATCCAT-A ***
58856966-C-T 56733905-G-A ***
26444125-A-C 24297978-A-C P1_Y1 ***
58980067-C-T 56833920-C-T ***
13976854-G-A 11856148-G-A ***
58982881-T-A 56836734-T-A ***
22366165-C-A 20204279-C-A DYZ19 ***
19029927-T-G 16918047-T-G ***
13485502-G-A 11329826-G-A ***
58979629-C-T 56833482-C-T ***
58979394-T-G 56833247-T-G ***
58982195-GCTG-CCTC 56836048-GCTG-CCTC ***
58982195-G-C 56836048-G-C ***
58853651-T-C 56737220-A-G ***
15320652-G-A 13208758-G-A ***
6451957-G-GT 6583916-G-GT 17×T***
58888863-T-C 56702008-A-G ***
22501007-T-A 20339121-T-A DYZ19 ***
21182397-CT-C 19020511-CT-C 20×T***
22366559-T-A 20204673-T-A DYZ19 ***
13319801-A-T 11164125-A-T ***
5146192-CT-C 5278151-CT-C 19×T***
22995376-GT-G 20833490-GT-G 21×T***
22355038-T-C 20193152-T-C DYZ19 ***
22355010-T-G 20193124-T-G DYZ19 ***
22354997-G-A 20193111-G-A DYZ19 ***
59007432-CTT-C 56861285-CTT-C 18×T***
13976870-T-C 11856164-T-C ***
9952950-T-G 10115341-T-G ***
5083952-CT-C 5215911-CT-C 17×T***
22322002-T-G 20160116-T-G DYZ19 ***
22321995-T-C 20160109-T-C DYZ19 ***
13452048-TACG-CACT 11296372-TACG-CACT ***
3411996-TTGTG-T 3543955-TTGTG-T 23×TG***
5795860-CT-C 5927819-CT-C 18×T***
58844920-G-A 56745951-C-T ***
22250237-G-C 20088351-G-C DYZ19 ***
16520992-C-CA 14409112-C-CA 16×A***
6523650-CGT-C 6655609-CGT-C 14×GT***
28680954-G-C 26534807-G-C ***
23281361-A-AT 21119475-A-AT 14×T***
23435202-C-TT 21273316-C-TT ***
22322013-T-A 20160127-T-A DYZ19 ***
13374277-G-GA 11218601-G-GA 13×A***
28478036-T-G 26331889-T-G ***
22505044-GCCTT-ACCTC 20343158-GCCTT-ACCTC DYZ19 ***
58979989-T-C 56833842-T-C ***
15592550-CAA-C 13480670-CAA-C 22×A***
24931126-G-A 22784979-G-A g1 ***
8030030-TA-T 8161989-TA-T 26×A***
18354164-T-A 16242284-T-A P6_Prx 13×AGAA***
26248087-C-CA 24101940-C-CA P1_Y1 16×A***
18346473-CTG-C 16234593-CTG-C P6_Prx 22×TG***
15479942-C-CT 13368062-C-CT 21×T***
22322009-T-A 20160123-T-A DYZ19 ***
22962187-AT-A 20800301-AT-A 14×T***
13909162-A-G 11788456-A-G ***
13259839-T-A 11104163-T-A ***
13503526-T-C 11347850-T-C ***
13503524-T-TAC 11347848-T-TAC ***
13410495-T-A 11254819-T-A ***
13387604-A-G 11231928-A-G ***
13364241-A-G 11208565-A-G ***
13354549-A-G 11198873-A-G ***
13286895-T-C 11131219-T-C ***
13286631-C-T 11130955-C-T ***
13269151-T-A 11113475-T-A ***
13269100-G-A 11113424-G-A ***
13266422-CCCATGGAAGATGAGGAGT-C 11110746-CCCATGGAAGATGAGGAGT-C ***
9941758-A-G 10104149-A-G ***
3720173-ACCC-CTCT 3852132-ACCC-CTCT ***
9789318-GTA-G 9951709-GTA-G ***
8708375-A-ATG 8840334-A-ATG 15×TG***
6091769-A-G 6223728-A-G ***
3088019-C-T 3219978-C-T ***
3081789-T-C 3213748-T-C ***
3081703-T-C 3213662-T-C ***
3176879-C-G 3308838-C-G S3509 ***
28812236-A-G 26666089-A-G ***
13478229-T-A 11322553-T-A ***
28692500-TA-T 26546353-TA-T 19×A***
58990037-T-G 56843890-T-G ***
5832504-G-T 5964463-G-T ***
2760012-G-A 2891971-G-A ***
5960685-A-T 6092644-A-T ***
13526268-G-T 11370592-G-T ***
6895669-G-T 7027628-G-T ***
7924633-T-A 8056592-T-A ***
7894750-C-A 8026709-C-A ***
7709675-A-T 7841634-A-T ***
7643277-C-A 7775236-C-A ***
7613908-C-A 7745867-C-A ***
7573235-T-C 7705194-T-C ***
7510400-A-T 7642359-A-T ***
7456306-A-T 7588265-A-T IR1_L ***
7387453-G-T 7519412-G-T ***
7346851-C-A 7478810-C-A ***
6996712-G-T 7128671-G-T ***
6820695-T-C 6952654-T-C ***
8085797-G-A 8217756-G-A ***
6725273-G-A 6857232-G-A ***
6609354-T-C 6741313-T-C ***
6468926-T-A 6600885-T-A A3254 28×A***
6313915-T-C 6445874-T-C IR3_Dst ***
6287188-G-T 6419147-G-T IR3_Dst ***
6042773-A-T 6174732-A-T ***
5770763-A-T 5902722-A-T ***
5734054-G-T 5866013-G-T ***
5721430-T-A 5853389-T-A ***
5575532-T-G 5707491-T-G ***
5569037-A-C 5700996-A-C ***
8085786-G-A 8217745-G-A ***
58866021-C-CCCATTCCATT 56724789-C-CAATGGAATGG 12×CCATT***
5412768-T-G 5544727-T-G ***
9941788-A-T 10104179-A-T ***
13478319-C-A 11322643-C-A ***
13478242-C-A 11322566-C-A ***
13441459-C-A 11285783-C-A ***
13390895-T-C 11235219-T-C ***
13390889-C-T 11235213-C-T ***
13375570-A-G 11219894-A-G ***
13327230-G-A 11171554-G-A ***
13196249-A-T 11040573-A-T ***
13140162-A-G 10629648-A-G ***
13138679-T-C 10628165-T-C ***
10044675-C-T 10207066-C-T ***
9921632-G-T 10084023-G-T ***
8094946-T-C 8226905-T-C ***
9914192-G-A 10076583-G-A ***
9732734-A-G 9895125-A-G IR3_Prx ***
9732732-C-T 9895123-C-T IR3_Prx ***
9732724-T-C 9895115-T-C IR3_Prx ***
9716048-A-G 9878439-A-G IR3_Prx ***
9468743-A-G 9631134-A-G ***
9417402-A-G 9579793-A-G ***
9031171-T-G 9193562-T-G ***
8826380-A-G 8958339-A-G ***
8666753-C-T 8798712-C-T ***
8110045-G-T 8242004-G-T ***
5495109-C-A 5627068-C-A ***
5364540-A-G 5496499-A-G ***
28721499-C-A 26575352-C-A 18×A***
2776547-T-C 2908506-T-C ***
3763674-T-A 3895633-T-A 10×A***
3687219-C-A 3819178-C-A ***
3590820-A-T 3722779-A-T ***
3471839-A-G 3603798-A-G ***
3132409-A-G 3264368-A-G ***
3061590-T-A 3193549-T-A ***
2991063-T-C 3123022-T-C ***
2835687-C-G 2967646-C-G ***
2835684-T-C 2967643-T-C ***
2835680-G-A 2967639-G-A ***
2835667-T-A 2967626-T-A ***
2707419-T-A 2839378-T-A 14×A***
3805179-C-T 3937138-C-T ***
2676375-A-G 2808334-A-G ***
58875757-T-C 56715114-A-G ***
13976836-G-C 11856130-G-C ***
13923809-C-A 11803103-C-A ***
58991775-G-T 56845628-G-T ***
24446970-T-G 22300823-T-G ***
24446966-A-G 22300819-A-G ***
3013453-A-T 3145412-A-T ***
58977855-T-C 56831708-T-C ***
58986802-C-T 56840655-C-T ***
3081710-T-C 3213669-T-C ***
3778367-A-G 3910326-A-G ***
3808174-C-A 3940133-C-A ***
5241257-A-C 5373216-A-C ***
4750952-C-A 4882911-C-A ***
5231929-C-T 5363888-C-T ***
5102434-A-G 5234393-A-G ***
5102429-T-C 5234388-T-C ***
5102425-T-C 5234384-T-C ***
5102412-G-T 5234371-G-T ***
5034263-T-C 5166222-T-C ***
5009754-G-T 5141713-G-T ***
5009703-G-T 5141662-G-T ***
5007803-G-C 5139762-G-C ***
4848390-G-T 4980349-G-T ***
4817106-T-C 4949065-T-C ***
4665670-G-A 4797629-G-A ***
3859482-T-C 3991441-T-C ***
4557343-T-A 4689302-T-A ***
4537142-G-T 4669101-G-T ***
4532779-T-C 4664738-T-C ***
4524606-C-A 4656565-C-A ***
4438566-T-G 4570525-T-G ***
4390607-A-G 4522566-A-G ***
4164066-G-A 4296025-G-A ***
4089885-A-T 4221844-A-T ***
4025833-A-C 4157792-A-C ***
4023315-C-A 4155274-C-A ***
4022246-G-C 4154205-G-C ***
3878483-T-A 4010442-T-A ***
59024399-TG-CA 56878252-TG-CA ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: GR4NN1699899999371608100472
Used in age calculations1699899999371608100472
Counts of SNPs1513
Variant counts last updated 2017-12-15 23:48:25.



Big Tree Main Page