Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > DF21/S192 > S5488 > BY518 > S7200 > S6003 > Z16543 > S6000 > FGC43477 > BY11119

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
MG6SG
6455042-G-T 6587001-G-T FGC53215 +
13200612-C-T 11044936-C-T S6023 +
17221813-T-C 15109933-T-C FGC53218 Y+
3645202-T-C 3777161-T-C FGC53206 +
5275759-T-C 5407718-T-C FGC4545 +
6097590-G-A 6229549-G-A FGC53213 +
4376530-A-T 4508489-A-T FGC53209 +
28672150-G-A 26526003-G-A FGC53223 +
3694038-G-A 3825997-G-A FGC53207 +
4332461-G-T 4464420-G-T S6025 +
5878017-G-A 6009976-G-A FGC53211 +
19514590-T-A 17402710-T-A FGC53220 YY+
8254735-C-T 8386694-C-T FGC53216 YY+
5901985-C-T 6033944-C-T FGC53212 +
19105511-A-C 16993631-A-C FGC53219 YY+
5072413-C-G 5204372-C-G FGC53210 +
22113578-C-A 19951692-C-A **
13449956-CCCATT-C 11294280-CCCATT-C **
27701545-G-A 25555398-G-A P1_Y2 **
22593784-T-A 20431898-T-A **
13383525-C-G 11227849-C-G FGC39086 **
6430439-T-TTATATATA 6562398-T-TTATATATA 19×TA**
5671364-C-A 5803323-C-A **
6347741-A-AGAAAGAAAGAAAGAAGGAAGGAAG 6479700-A-AGAAAGAAAGAAAGAAGGAAGGAAG 9×GAAG**
5671363-G-A 5803322-G-A **
21633142-T-C 19471256-T-C **
22643238-A-G 20481352-A-G **
21578272-T-A 19416386-T-A **
58863010-T-C 56727861-A-G **
5275909-C-G 5407868-C-G Y82066 **
3640532-T-TTTCTTTCC 3772491-T-TTTCTTTCC 9×TTCC**
13302962-CAAAAAAAA-C 11147286-CAAAAAAAA-C 17×A**
5962418-G-A 6094377-G-A **
3203721-A-G 3335680-A-G **
28577950-TACACACAC-T 26431803-TACACACAC-T 17×AC**
22301825-T-C 20139939-T-C DYZ19 **
58863074-T-A 56727797-A-T **
58842645-C-A 56748226-G-T **
58842636-A-T 56748235-T-A **
10049654-G-A 10212045-G-A **
7917794-A-C 8049753-A-C **
7885882-T-C 8017841-T-C **
13262080-A-T 11106404-A-T **
13348354-T-G 11192678-T-G **
22303915-T-C 20142029-T-C DYZ19 **
16868746-CAT-C 14756866-CAT-C 22×AT**
7496806-G-A 7628765-G-A IR1_L **
22546195-T-G 20384309-T-G FGC55740 **
28243418-A-G 26097271-A-G P1_b4 **
22311994-A-G 20150108-A-G DYZ19 **
19309422-C-CATATAT 17197542-C-CATATAT 19×AT**
22243377-C-A 20081491-C-A DYZ19 **
59013309-A-G 56867162-A-G **
59017019-G-C 56870872-G-C **
59013133-C-T 56866986-C-T **
59000064-C-T 56853917-C-T **
21278339-A-G 19116453-A-G **
13485761-A-T 11330085-A-T **
58836895-A-G 56753976-T-C **
21336366-A-G 19174480-A-G **
22713237-G-C 20551351-G-C **
13876279-C-G 11755573-C-G **
22241054-G-A 20079168-G-A DYZ19 **
4288849-G-A 4420808-G-A **
19019136-G-T 16907256-G-T FGC55737 **
17635758-G-T 15523878-G-T **
16323531-A-T 14211651-A-T **
19377322-G-A 17265442-G-A **
3543151-T-C 3675110-T-C **
4848351-AAT-A 4980310-AAT-A 16×AT**
18876831-A-G 16764951-A-G **
58843251-G-A 56747620-C-T **
23076552-G-A 20914666-G-A **
25085705-C-T 22939558-C-T g1 **
2897443-G-T 3029402-G-T **
17065590-A-T 14953710-A-T **
22220467-A-G 20058581-A-G DYZ19 **
5275903-C-T 5407862-C-T Y82065 **
17220297-T-C 15108417-T-C **
58892374-CATTCTATTCA-C 56698486-ATGAATAGAAT-A **
17226959-C-T 15115079-C-T **
15806409-G-A 13694529-G-A **
13876341-A-G 11755635-A-G **
15676201-C-A 13564321-C-A **
14726335-C-T 12614403-C-T **
13876310-T-G 11755604-T-G **
21198454-A-T 19036568-A-T **
21197779-A-T 19035893-A-T **
23049406-A-G 20887520-A-G **
14258246-A-T 12137540-A-T **
21058055-G-A 18896169-G-A **
15379573-T-C 13267693-T-C **
14685507-C-A 12573573-C-A **
21042773-G-T 18880887-G-T **
4679401-C-T 4811360-C-T **
13480365-C-T 11324689-C-T **
15117931-G-T 13006018-G-T **
13259899-T-C 11104223-T-C **
18618375-G-A 16506495-G-A **
15150047-G-T 13038134-G-T **
15150691-G-A 13038778-G-A **
24578683-A-G 22432536-A-G P3_t2 ***
22508378-C-G 20346492-C-G DYZ19 ***
22507794-C-A 20345908-C-A DYZ19 ***
22466051-A-C 20304165-A-C DYZ19 ***
24324698-A-T 22178551-A-T P3_t1 ***
24671066-A-C 22524919-A-C P3_b2 ***
22448614-G-T 20286728-G-T DYZ19 ***
22477579-G-C 20315693-G-C DYZ19 ***
22447419-C-T 20285533-C-T DYZ19 ***
24753613-A-G 22607466-A-G P3_b2 ***
22506808-T-A 20344922-T-A DYZ19 ***
22474332-G-T 20312446-G-T DYZ19 ***
22478973-A-T 20317087-A-T DYZ19 ***
24316274-G-A 22170127-G-A P3_t1 ***
22511402-T-A 20349516-T-A DYZ19 ***
22508386-T-G 20346500-T-G DYZ19 ***
24264203-A-T 22118056-A-T P3_b1 ***
22447390-C-G 20285504-C-G DYZ19 ***
23052443-T-C 20890557-T-C ***
22623011-G-T 20461125-G-T ***
23052444-T-G 20890558-T-G ***
23223343-T-A 21061457-T-A ***
23513985-T-G 21352099-T-G ***
22541566-T-C 20379680-T-C ***
23838796-C-T 21676910-C-T ***
22511403-T-C 20349517-T-C DYZ19 ***
24315012-A-T 22168865-A-T P3_t1 ***
22713778-A-C 20551892-A-C ***
22511385-G-A 20349499-G-A DYZ19 ***
24311170-T-C 22165023-T-C P3_t1 ***
22511362-A-T 20349476-A-T DYZ19 ***
22511279-G-C 20349393-G-C DYZ19 ***
22508653-T-A 20346767-T-A DYZ19 ***
22508646-C-A 20346760-C-A DYZ19 ***
22508632-T-C 20346746-T-C DYZ19 ***
22508424-C-A 20346538-C-A DYZ19 ***
22447410-T-A 20285524-T-A DYZ19 ***
58855286-CCCATTCCATT-C 56735539-CAATGGAATGG-C 9×CCATT***
22447383-G-A 20285497-G-A DYZ19 ***
21096457-T-A 18934571-T-A ***
20875126-A-T 18713240-A-T P4_Dst ***
20946372-C-T 18784486-C-T P4_Dst ***
21011946-T-A 18850060-T-A P4_Dst ***
21012057-A-T 18850171-A-T P4_Dst ***
21029017-C-T 18867131-C-T P4_Dst ***
21029111-C-T 18867225-C-T P4_Dst ***
21278027-T-C 19116141-T-C ***
20751494-A-C 18589608-A-C P4_Prx ***
21352026-T-C 19190140-T-C ***
21449972-A-G 19288086-A-G ***
21575433-C-T 19413547-C-T ***
21575616-T-G 19413730-T-G ***
21599252-G-A 19437366-G-A 11×A***
21862032-A-T 19700146-A-T ***
21943231-T-A 19781345-T-A ***
20783000-C-A 18621114-C-A P4_Prx ***
20749242-A-G 18587356-A-G P4_Prx ***
21945088-C-T 19783202-C-T ***
20062604-G-A 17950724-G-A P5_Prx ***
19433893-A-G 17322013-A-G ***
19436824-A-G 17324944-A-G ***
19562378-G-T 17450498-G-T ***
19624751-C-A 17512871-C-A P5_Prx ***
19721469-G-A 17609589-G-A P5_Prx ***
19847771-T-C 17735891-T-C P5_Prx ***
20001591-G-A 17889711-G-A P5_Prx ***
20434152-G-T 18272266-G-T P5_Dst ***
20631540-G-A 18469654-G-A P4_Prx ***
20434220-T-A 18272334-T-A P5_Dst ***
20434228-G-A 18272342-G-A P5_Dst ***
20434249-T-A 18272363-T-A P5_Dst ***
20434258-C-A 18272372-C-A P5_Dst ***
20501676-C-A 18339790-C-A P5_Dst ***
20533184-C-T 18371298-C-T P5_Dst ***
20613651-G-T 18451765-G-T P4_Prx ***
21943328-C-A 19781442-C-A ***
22151007-A-G 19989121-A-G ***
22446739-T-C 20284853-T-C DYZ19 ***
22345610-A-T 20183724-A-T DYZ19 ***
22317910-A-G 20156024-A-G DYZ19 ***
22328855-C-G 20166969-C-G DYZ19 ***
22335946-T-G 20174060-T-G DYZ19 ***
22335973-T-C 20174087-T-C DYZ19 ***
22338840-T-G 20176954-T-G DYZ19 ***
22338856-A-C 20176970-A-C DYZ19 ***
22348119-G-C 20186233-G-C DYZ19 ***
22302777-A-T 20140891-A-T ZS8743 DYZ19 ***
22358737-A-G 20196851-A-G DYZ19 ***
22366449-G-T 20204563-G-T DYZ19 ***
22430701-C-T 20268815-C-T DYZ19 ***
22433064-A-G 20271178-A-G DYZ19 ***
22433366-A-T 20271480-A-T DYZ19 ***
22433434-C-A 20271548-C-A DYZ19 ***
22446481-C-G 20284595-C-G BY30540 DYZ19 ***
22304462-C-T 20142576-C-T DYZ19 ***
22274954-A-G 20113068-A-G DYZ19 ***
22151091-T-A 19989205-T-A ***
22240702-T-G 20078816-T-G DYZ19 ***
22217436-G-T 20055550-G-T DYZ19 ***
22229579-T-A 20067693-T-A DYZ19 ***
22229585-T-A 20067699-T-A DYZ19 ***
22229606-T-C 20067720-T-C DYZ19 ***
22229616-A-G 20067730-A-G DYZ19 ***
22229619-G-C 20067733-G-C DYZ19 ***
22229637-G-C 20067751-G-C DYZ19 ***
22240901-T-G 20079015-T-G DYZ19 ***
22262771-A-T 20100885-A-T DYZ19 ***
22240947-T-A 20079061-T-A DYZ19 ***
22246890-G-T 20085004-G-T DYZ19 ***
22246983-T-G 20085097-T-G DYZ19 ***
22246988-G-A 20085102-G-A DYZ19 ***
24769636-C-G 22623489-C-G P3_b2 ***
22250194-G-A 20088308-G-A DYZ19 ***
22252340-C-A 20090454-C-A DYZ19 ***
22246999-A-T 20085113-A-T DYZ19 ***
25980886-A-T 23834739-A-T P1_Y1 ***
24901954-G-T 22755807-G-T g1 ***
13448846-TTCCACTACAG-CTCCTCTCCAC 11293170-TTCCACTACAG-CTCCTCTCCAC ***
6780870-CAAAAAAAAAAAA-C 6912829-CAAAAAAAAAAAA-C 26×A***
8566855-C-CG 8698814-C-CG ***
8631383-CTTTTTTTT-C 8763342-CTTTTTTTT-C 26×T***
9403521-GTTTTTTT-G 9565912-GTTTTTTT-G 21×T***
13109577-ATT-TGC 10599063-ATT-TGC ***
13141990-CA-AC 10631476-CA-AC ***
13256858-GTTTTTT-G 11101182-GTTTTTT-G 18×T***
13329879-AATATATATATATATATATATATATATATAT-A 11174203-AATATATATATATATATATATATATATATAT-A 25×AT***
13449968-CATTCCA-C 11294292-CATTCCA-C ***
6099384-CAAAAAA-C 6231343-CAAAAAA-C 17×A***
13478257-GAGT-ATGC 11322581-GAGT-ATGC ***
13479142-ACT-CCC 11323466-ACT-CCC ***
13486591-TAG-CAC 11330915-TAG-CAC ***
13535727-G-GTA 11380051-G-GTA ***
13620460-AAAT-A 11464784-AAAT-A ***
13695553-CCGGAATGGT-ACGGAATGGA 11539877-CCGGAATGGT-ACGGAATGGA ***
13695597-GA-TT 11539921-GA-TT ***
13709364-TGGA-AGGG 11553688-TGGA-AGGG ***
6226090-T-TCTTTCTTTCTTA 6358049-T-TCTTTCTTTCTTA IR3_Dst ***
5671363-GC-AA 5803322-GC-AA ***
13829461-A-AATGGT 11708755-A-AATGGT ***
59025484-G-T 56879337-G-T ***
58996467-T-G 56850320-T-G ***
58996548-C-T 56850401-C-T ***
58996554-A-G 56850407-A-G ***
58996590-C-T 56850443-C-T ***
58996593-A-C 56850446-A-C ***
58996595-T-A 56850448-T-A ***
58996600-T-G 56850453-T-G ***
59016469-G-A 56870322-G-A ***
13466543-CCC-GCT 11310867-CCC-GCT ***
4763687-AT-A 4895646-AT-A 24×T***
9201881-A-AT 9364272-A-AT ***
22015024-CA-C 19853138-CA-C 13×A***
4275258-C-CA 4407217-C-CA 21×A***
3403730-G-GAAAA 3535689-G-GAAAA 10×A***
13869680-GA-AT 11748974-GA-AT ***
3192111-AT-A 3324070-AT-A ***
3192112-TT-C 3324071-TT-C ***
3822962-G-GATATATATAT 3954921-G-GATATATATAT 26×AT***
4650514-TATATATAC-T 4782473-TATATATAC-T ***
13829458-T-TGGAAG 11708752-T-TGGAAG ***
13866440-CATTG-GATCA 11745734-CATTG-GATCA ***
58996433-G-T 56850286-G-T ***
58912904-TTTG-ATTC 56677964-CAAA-GAAT ***
22511402-TT-AC 20349516-TT-AC DYZ19 ***
23293592-GTGTGTGTATATA-G 21131706-GTGTGTGTATATA-G ***
26455900-CT-C 24309753-CT-C P1_Y1 22×T***
26906643-CAAAG-AAAAA 24760496-CAAAG-AAAAA P1_r3 ***
27127657-T-TCTTC 24981510-T-TCTTC P1_g3 7×CTTC***
28553992-CAAAAAAAAAAAA-C 26407845-CAAAAAAAAAAAA-C 28×A***
28818236-CA-TG 26672089-CA-TG ***
58912889-ATTCT-GTTCG 56677978-AGAAT-CGAAC ***
58972817-GTCCA-G 56826670-GTCCA-G ***
22447410-TG-AT 20285524-TG-AT DYZ19 ***
58979972-C-CATTCA 56833825-C-CATTCA ***
58982047-A-ACCCCT 56835900-A-ACCCCT ***
58982088-CTCCAC-TTACAT 56835941-CTCCAC-TTACAT ***
58982110-GCAC-ACAT 56835963-GCAC-ACAT ***
58985009-GGGGG-TGGGA 56838862-GGGGG-TGGGA ***
58996381-CACATA-GACCTC 56850234-CACATA-GACCTC ***
58996420-GAGGA-AGGGC 56850273-GAGGA-AGGGC ***
58996432-TGTAA-CTTAT 56850285-TGTAA-CTTAT ***
59000268-G-GA 56854121-G-GA 8×A***
22486861-CAGG-GAGA 20324975-CAGG-GAGA DYZ19 ***
22446447-GA-CT 20284561-GA-CT DYZ19 ***
13866610-AAATGAAATCGTG-GAATAGAATGGAC 11745904-AAATGAAATCGTG-GAATAGAATGGAC ***
15557122-ATAATAT-A 13445242-ATAATAT-A ***
13869114-GGACTGGAG-TGATTTCAA 11748408-GGACTGGAG-TGATTTCAA ***
14097969-G-TT 11977263-G-TT ***
14385544-AT-A 12264840-AT-A ***
14396417-CA-C 12275713-CA-C 13×A***
14704580-GTATAA-G 12592646-GTATAA-G ***
14709281-A-AG 12597348-A-AG ***
15047302-T-TG 12935393-T-TG ***
15076180-CTTTTT-C 12964270-CTTTTT-C 16×T***
16344455-TCTG-T 14232575-TCTG-T ***
22446350-TCG-ACC 20284464-TCG-ACC DYZ19 ***
17196756-AA-GT 15084876-AA-GT ***
18263852-GTC-G 16151972-GTC-G ***
21346996-T-TTTTA 19185110-T-TTTTA ***
21504260-T-TA 19342374-T-TA ***
21575408-AT-A 19413522-AT-A 8×T***
22229616-ATTG-GGTC 20067730-ATTG-GGTC DYZ19 ***
22229637-GC-CT 20067751-GC-CT DYZ19 ***
22246950-GCTGC-ACTGT 20085064-GCTGC-ACTGT DYZ19 ***
22293415-TA-CG 20131529-TA-CG DYZ19 ***
58996466-T-A 56850319-T-A ***
58996424-A-C 56850277-A-C ***
24914379-C-A 22768232-C-A g1 ***
27713157-T-C 25567010-T-C P1_Y2 ***
26713775-C-T 24567628-C-T P1_g2 ***
26970584-C-T 24824437-C-T P1_r4 ***
26995087-T-G 24848940-T-G P1_r4 ***
27022651-G-T 24876504-G-T P1_r4 ***
27131832-T-C 24985685-T-C P1_g3 ***
27482161-G-T 25336014-G-T P1_Y2 ***
27523484-G-A 25377337-G-A P1_Y2 ***
27558055-G-T 25411908-G-T P1_Y2 ***
27715577-A-T 25569430-A-T P1_Y2 ***
26543890-C-A 24397743-C-A P1_g2 ***
27813568-A-G 25667421-A-G P1_Y2 ***
27863178-A-T 25717031-A-T P1_Y2 ***
27906510-A-C 25760363-A-C P1_Y2 ***
27936402-C-A 25790255-C-A P1_Y2 ***
27938119-A-C 25791972-A-C P1_Y2 ***
28006201-A-T 25860054-A-T P1_Y2 ***
28148051-C-A 26001904-C-A P1_b4 ***
28148871-A-T 26002724-A-T P1_b4 ***
26599220-G-T 24453073-G-T P1_g2 ***
26516858-C-T 24370711-C-T P1_Y1 ***
28190967-C-G 26044820-C-G P1_b4 ***
25652037-T-C 23505890-T-C P1_b3 ***
24922426-T-A 22776279-T-A g1 ***
25113281-C-A 22967134-C-A g1 ***
25200639-A-T 23054492-A-T g1 ***
25358463-C-A 23212316-C-A P2_r2 ***
25396514-T-A 23250367-T-A P2_r2 ***
25496844-T-C 23350697-T-C P2_r2 ***
25524489-A-T 23378342-A-T P1_gr1 ***
25524691-T-G 23378544-T-G P1_gr1 ***
25760939-A-C 23614792-A-C P1_b3 ***
26391318-G-A 24245171-G-A P1_Y1 ***
25971999-C-A 23825852-C-A P1_Y1 ***
26045761-G-A 23899614-G-A P1_Y1 ***
26048094-T-C 23901947-T-C P1_Y1 ***
26121699-T-C 23975552-T-C P1_Y1 ***
26148899-T-C 24002752-T-C P1_Y1 ***
26170270-G-A 24024123-G-A P1_Y1 ***
26299273-C-T 24153126-C-T P1_Y1 ***
26335441-T-C 24189294-T-C P1_Y1 ***
26343360-C-T 24197213-C-T P1_Y1 ***
28181904-C-T 26035757-C-T P1_b4 ***
28210350-C-A 26064203-C-A P1_b4 ***
58996420-G-A 56850273-G-A ***
58982110-G-A 56835963-G-A ***
58979689-C-A 56833542-C-A ***
58979733-C-T 56833586-C-T ***
58979764-C-T 56833617-C-T ***
58979785-C-T 56833638-C-T ***
58979790-C-T 56833643-C-T ***
58979801-A-G 56833654-A-G ***
58982073-C-T 56835926-C-T ***
58982090-C-A 56835943-C-A ***
58982182-T-A 56836035-T-A ***
58912889-A-G 56677982-T-C ***
58983714-T-A 56837567-T-A ***
58985083-G-T 56838936-G-T ***
58985108-A-G 56838961-A-G ***
58985120-T-A 56838973-T-A ***
58985143-A-T 56838996-A-T ***
58996364-C-T 56850217-C-T ***
58996381-C-G 56850234-C-G ***
58996386-A-C 56850239-A-C ***
58996392-T-C 56850245-T-C ***
58979681-A-T 56833534-A-T ***
58912884-A-C 56677987-T-G ***
28239658-G-A 26093511-G-A P1_b4 ***
58827758-A-C 56763113-T-G ***
28306614-T-G 26160467-T-G P1_b4 ***
28554907-A-G 26408760-A-G ***
28556243-A-G 26410096-A-G ***
28556435-T-G 26410288-T-G ***
28556442-G-T 26410295-G-T ***
28578872-T-G 26432725-T-G ***
28802566-G-T 26656419-G-T ***
58819541-T-A 56771330-A-T ***
58830172-T-C 56760699-A-G ***
58885216-T-C 56705655-A-G ***
58837067-C-T 56753804-G-A ***
58842468-G-A 56748403-C-T ***
58842566-C-A 56748305-G-T ***
58859026-C-T 56731845-G-A ***
58869371-G-T 56721500-C-A ***
58869382-A-G 56721489-T-C ***
58869455-C-T 56721416-G-A ***
58880401-C-A 56710470-G-T ***
58884468-A-G 56706403-T-C ***
18966181-T-C 16854301-T-C ***
15890305-T-A 13778425-T-A ***
18902217-G-A 16790337-G-A ***
13471993-CCTGC-GCTGT 11316317-CCTGC-GCTGT ***
13489635-AC-CA 11333959-AC-CA ***
13471993-C-G 11316317-C-G ***
13471997-C-T 11316321-C-T ***
13472005-G-A 11316329-G-A ***
58913899-A-G 56676972-T-C ***
58913913-G-T 56676958-C-A ***
13471944-GGGC-CGGT 11316268-GGGC-CGGT ***
13472003-TGG-AGA 11316327-TGG-AGA ***
13737187-C-G 11581511-C-G ***
58867548-G-T 56723323-C-A ***
58867544-CCAAG-TCAAT 56723323-CTTGG-ATTGA ***
5797434-G-GATAT 5929393-G-GATAT 21×AT***
13730781-C-G 11575105-C-G ***
22472228-C-T 20310342-C-T DYZ19 ***
23223346-G-C 21061460-G-C ***
58979135-GATCTCACTCTGTCAC-TATCCCATTCTATCAA 56832988-GATCTCACTCTGTCAC-TATCCCATTCTATCAA ***
9917399-T-A 10079790-T-A ***
13936208-G-GAAAA 11815502-G-GAAAA ***
58836198-G-A 56754673-C-T ***
22246978-A-G 20085092-A-G DYZ19 ***
59017911-A-C 56871764-A-C ***
59018698-C-T 56872551-C-T ***
59018716-G-A 56872569-G-A ***
59020611-C-T 56874464-C-T ***
13471853-G-C 11316177-G-C ***
13461130-A-T 11305454-A-T ***
26906688-G-T 24760541-G-T P1_r3 ***
22476799-A-G 20314913-A-G BY25201 DYZ19 ***
26170527-GGAA-G 24024380-GGAA-G P1_Y1 23×GAA***
9323031-T-C 9485422-T-C ***
17998681-GAC-CAA 15886801-GAC-CAA P7_Gap ***
58912983-C-G 56677888-G-C ***
58836974-T-C 56753897-A-G ***
4826400-T-TTA 4958359-T-TTA 22×TA***
13140505-T-C 10629991-T-C ***
58833554-G-A 56757317-C-T ***
58829858-C-T 56761013-G-A ***
58836197-C-A 56754674-G-T ***
58836270-T-A 56754601-A-T ***
59014835-T-C 56868688-T-C ***
58984804-AGGGGCTTTT-GGGGTCTCTG 56838657-AGGGGCTTTT-GGGGTCTCTG ***
59024400-G-A 56878253-G-A 9×CA***
13480261-C-G 11324585-C-G ***
13480300-A-G 11324624-A-G ***
13194643-T-TA 11038967-T-TA ***
13480296-CTGTAGGC-TTGTGGGG 11324620-CTGTAGGC-TTGTGGGG ***
59024398-G-GCACACACACACA 56878251-G-GCACACACACACA ***
58984759-ACTGATC-CATGCTT 56838612-ACTGATC-CATGCTT ***
58982194-AGCTG-TGCTC 56836047-AGCTG-TGCTC ***
13737578-G-C 11581902-G-C ***
58990019-C-A 56843872-C-A ***
13471840-ACT-GCC 11316164-ACT-GCC ***
59024399-TG-CA 56878252-TG-CA ***
21599245-G-A 19437359-G-A ***
58869256-C-T 56721615-G-A ***
14986717-TGC-T 12874786-G-A ***
58884687-T-C 56706184-A-G ***
58912899-A-C 56677972-T-G ***
18518347-G-T 16406467-G-T P6_Dst ***
58996610-G-C 56850463-G-C ***
25628511-G-T 23482364-G-T P1_b3 ***
58984647-AATTG-TATTT 56838500-AATTG-TATTT ***
13262767-CCTG-GCCA 11107091-CCTG-GCCA ***
58984791-G-C 56838644-G-C ***
58984808-G-T 56838661-G-T ***
58982217-C-T 56836070-C-T ***
58984751-A-T 56838604-A-T ***
58984811-T-C 56838664-T-C ***
58984823-T-A 56838676-T-A ***
58984673-GT-G 56838526-GT-G ***
58996466-TT-AG 56850319-TT-AG ***
18626835-C-A 16514955-C-A ***
58996520-C-T 56850373-C-T ***
58996443-A-G 56850296-A-G ***
13485671-TATATGTC-GACGTGTA 11329995-TATATGTC-GACGTGTA ***
13697222-CA-TT 11541546-CA-TT ***
22476734-CAGT-GAGA 20314848-CAGT-GAGA DYZ19 ***
58979750-CACT-AATG 56833603-CACT-AATG ***
58979801-ATCCT-GTCCC 56833654-ATCCT-GTCCC ***
59017817-C-T 56871670-C-T ***
58984770-C-T 56838623-C-T ***
22366369-G-C 20204483-G-C DYZ19 ***
13471969-CACTG-AACCA 11316293-CACTG-AACCA ***
58872916-T-C 56717955-A-G ***
4819107-C-A 4951066-C-A ***
13519160-A-T 11363484-A-T ***
4503511-AT-A 4635470-AT-A 14×T***
58990037-T-G 56843890-T-G ***
13726504-A-G 11570828-A-G ***
13471960-CGCC-TGCT 11316284-CGCC-TGCT ***
22737231-CAAAAAA-C 20575345-CAAAAAA-C 18×A***
58909239-T-C 56681632-A-G ***
22249670-C-A 20087784-C-A DYZ19 ***
22477509-C-T 20315623-C-T DYZ19 ***
13726484-G-T 11570808-G-T ***
59001647-G-A 56855500-G-A ***
28818231-G-A 26672084-G-A ***
3205874-C-A 3337833-C-A 11×A***
3612442-G-A 3744401-G-A ***
13256632-G-A 11100956-G-A ***
22476587-T-A 20314701-T-A DYZ19 ***
17998520-G-A 15886640-G-A P7_Gap ***
13262769-T-C 11107093-T-C ***
13706783-G-T 11551107-G-T ***
22486876-C-T 20324990-C-T DYZ19 ***
5471896-A-AAAAGAAAG 5603855-A-AAAAGAAAG 17×AAAG***
22426248-A-G 20264362-A-G DYZ19 ***
22446447-G-C 20284561-G-C DYZ19 ***
22445023-A-T 20283137-A-T BY2018 DYZ19 ***
13688036-G-A 11532360-G-A ***
8426377-G-GCTTCTTCTTCTT 8558336-G-GCTTCTTCTTCTT 22×CTT***
22443109-A-C 20281223-A-C ZS3149 FGC21891 DYZ19 ***
28721499-CA-C 26575352-CA-C 18×A***
58916211-GCATTC-G 56674630-AAATGG-A 5×CATTC***
13205595-AAT-A 11049919-AAT-A 9×AT***
27127602-A-ATTTC 24981455-A-ATTTC P1_g3 14×TTTC***
13262747-A-G 11107071-A-G ***
13262752-C-A 11107076-C-A ***
13971479-A-G 11850773-A-G ***
13971462-A-G 11850756-A-G ***
59016927-CA-TG 56870780-CA-TG ***
13262767-C-G 11107091-C-G ***
13263735-C-G 11108059-C-G ***
58869132-T-C 56721739-A-G ***
13347482-C-T 11191806-C-T FGC54171 ***
58893785-G-C 56697086-C-G ***
59014716-A-C 56868569-A-C ***
22234267-AAGAAAT-TAGTAAC 20072381-AAGAAAT-TAGTAAC DYZ19 ***
5114698-A-G 5246657-A-G FGC50536 ***
9911366-G-A 10073757-G-A ***
10042485-A-T 10204876-A-T ***
13142973-C-G 10632459-C-G ***
13466560-A-G 11310884-A-G ***
59017756-GGCT-AGCC 56871609-GGCT-AGCC ***
13529708-A-G 11374032-A-G ***
13705964-G-C 11550288-G-C ***
13711644-G-C 11555968-G-C ***
13971449-C-T 11850743-C-T ***
17126467-T-C 15014587-T-C ***
21575572-C-G 19413686-C-G ***
22446476-A-C 20284590-A-C DYZ19 ***
24387386-CAT-C 22241239-CAT-C ***
58982267-C-A 56836120-C-A ***
13876494-C-G 11755788-C-G ***
13268077-C-A 11112401-C-A ***
17998689-C-T 15886809-C-T P7_Gap ***
13480303-C-G 11324627-C-G ***
13518879-C-G 11363203-C-G ***
13726488-AAGAATGGAAT-A 11570812-AAGAATGGAAT-A ***
13971440-C-T 11850734-C-T ***
14334340-G-GT 12213635-G-GT ***
17998681-G-C 15886801-G-C P7_Gap ***
17998683-C-A 15886803-C-A P7_Gap ***
19387017-A-ATGTAT 17275137-A-ATGTAT ***
13743379-GG-TT 11587703-GG-TT ***
19622109-TGC-T 17510229-TGC-T P5_Prx ***
22261446-A-G 20099560-A-G DYZ19 ***
28802591-G-T 26656444-G-T ***
58820079-A-C 56770792-T-G ***
58890116-C-G 56700755-G-C ***
59001391-AG-A 56855244-AG-A ***
59018842-C-A 56872695-C-A ***
22229638-C-T 20067752-C-T DYZ19 ***
58980034-C-CTCCACTCCATTCCAG 56833887-C-CTCCACTCCATTCCAG ***
22269313-AAC-CAG 20107427-AAC-CAG DYZ19 ***
18653218-A-T 16541338-A-T ***
13582335-A-T 11426659-A-T ***
13478459-C-T 11322783-C-T ***
13486454-C-A 11330778-C-A ***
13486591-T-C 11330915-T-C ***
13486943-C-A 11331267-C-A ***
13489393-T-C 11333717-T-C ***
13489394-G-C 11333718-G-C ***
13576927-A-G 11421251-A-G ***
13588271-A-G 11432595-A-G ***
13478439-G-A 11322763-G-A ***
13606765-G-A 11451089-G-A ***
13692273-A-G 11536597-A-G ***
13697233-G-A 11541557-G-A ***
13706793-G-A 11551117-G-A ***
13713253-C-G 11557577-C-G ***
13715519-C-T 11559843-C-T ***
13737068-G-A 11581392-G-A ***
13478455-G-T 11322779-G-T ***
13478413-C-T 11322737-C-T ***
13737516-C-T 11581840-C-T ***
13454276-C-A 11298600-C-A ***
13109441-G-A 10598927-G-A ***
13141054-A-G 10630540-A-G ***
13326315-A-G 11170639-A-G ***
13351776-T-C 11196100-T-C ***
13360646-A-G 11204970-A-G FGC26026 ***
13448820-A-T 11293144-A-T ***
13453255-A-T 11297579-A-T ***
13455524-C-T 11299848-C-T ***
13478407-G-A 11322731-G-A ***
13461109-G-C 11305433-G-C ***
13466545-C-T 11310869-C-T ***
13468463-C-T 11312787-C-T ***
13468489-T-A 11312813-T-A ***
13469633-A-C 11313957-A-C ***
13474293-G-C 11318617-G-C ***
13474299-T-G 11318623-T-G ***
13478362-G-C 11322686-G-C ***
13737157-C-T 11581481-C-T ***
13739677-A-G 11584001-A-G ***
10064181-T-C 10226572-T-C ***
17855005-C-G 15743125-C-G ***
16674521-T-C 14562641-T-C ***
16701803-T-A 14589923-T-A ***
17182070-T-C 15070190-T-C ***
17183269-T-C 15071389-T-C ***
17542493-C-T 15430613-C-T ***
17636465-A-T 15524585-A-T ***
17787097-G-A 15675217-G-A ***
17855049-C-T 15743169-C-T ***
16658494-C-T 14546614-C-T ***
17855067-A-G 15743187-A-G ***
17855071-C-T 15743191-C-T ***
17855098-G-A 15743218-G-A ***
18094184-A-T 15982304-A-T ***
18340302-C-G 16228422-C-G P6_Prx ***
18442174-G-T 16330294-G-T P6_Dst ***
18478800-C-G 16366920-C-G P6_Dst ***
18480043-G-A 16368163-G-A P6_Dst 17×A***
16658498-G-T 14546618-G-T ***
16658484-T-G 14546604-T-G ***
13798608-G-T 11677902-G-T ***
14610535-T-C 12498737-T-C ***
13856063-T-G 11735357-T-G ***
13857005-T-A 11736299-T-A ***
13866087-A-G 11745381-A-G ***
14153722-T-C 12033016-T-C ***
14183362-T-C 12062656-T-C ***
14247269-C-A 12126563-C-A ***
14574954-C-A 12463154-C-A ***
15101036-G-T 12989124-G-T ***
16623248-A-T 14511368-A-T ***
15189508-A-G 13077594-A-G ***
15233770-C-G 13121856-C-G ***
15378979-G-T 13267099-G-T ***
15629813-T-C 13517933-T-C ***
15792971-C-A 13681091-C-A ***
13473835-T-A 11318159-T-A ***
16009495-A-G 13897615-A-G ***
16397377-A-G 14285497-A-G ***
10081826-T-C 10244217-T-C ***
10052316-G-A 10214707-G-A ***
13489698-T-A 11334022-T-A ***
3604661-A-G 3736620-A-G ***
2895662-T-C 3027621-T-C ***
2955402-A-G 3087361-A-G ***
3032989-A-G 3164948-A-G ***
3192113-T-C 3324072-T-C ***
3204137-C-G 3336096-C-G ***
3461610-G-A 3593569-G-A ***
3534396-G-A 3666355-G-A ***
3612437-A-G 3744396-A-G ***
2740552-T-C 2872511-T-C ***
3612445-A-C 3744404-A-C ***
3612466-T-C 3744425-T-C ***
3612482-A-G 3744441-A-G ***
3635937-T-A 3767896-T-A ***
3650773-G-A 3782732-G-A ***
3809468-G-T 3941427-G-T ***
3943406-C-T 4075365-C-T ***
4192664-A-G 4324623-A-G ***
2856773-G-T 2988732-G-T ***
13486465-G-T 11330789-G-T ***
4292229-T-G 4424188-T-G ***
24283305-T-A 22137158-T-A P3_t1 ***
13697149-AGCTCC-GGCTCG 11541473-AGCTCC-GGCTCG ***
58981316-AT-CG 56835169-AT-CG ***
58982194-A-T 56836047-A-T ***
13468395-C-T 11312719-C-T ***
13194668-CCAGCTTGAAGC-TCCGGGTGGAGT 11038992-CCAGCTTGAAGC-TCCGGGTGGAGT ***
22438024-AGT-TGG 20276138-AGT-TGG DYZ19 ***
22311910-G-T 20150024-G-T BY19545 DYZ19 ***
58996432-T-C 56850285-T-C ***
58996315-T-C 56850168-T-C ***
22508403-C-A 20346517-C-A DYZ19 ***
15120443-T-C 13008530-T-C ***
58996421-A-G 56850274-A-G ***
58996591-T-G 56850444-T-G ***
5009336-G-A 5141295-G-A ***
22229595-G-T 20067709-G-T DYZ19 ***
22468467-T-A 20306581-T-A DYZ19 ***
13474363-C-A 11318687-C-A ***
4214997-G-A 4346956-G-A ***
4539153-G-A 4671112-G-A ***
10051354-C-A 10213745-C-A ***
9576192-G-T 9738583-G-T IR3_Prx ***
8279623-A-G 8411582-A-G ***
9224278-G-C 9386669-G-C ***
9236774-T-G 9399165-T-G ***
9322713-A-T 9485104-A-T ***
9408747-G-T 9571138-G-T ***
9539961-G-T 9702352-G-T IR3_Prx ***
9555851-C-T 9718242-C-T IR3_Prx ***
9611062-C-T 9773453-C-T IR3_Prx ***
7712228-T-C 7844187-T-C ***
9651451-G-A 9813842-G-A IR3_Prx ***
9722988-C-A 9885379-C-A IR3_Prx ***
9782832-G-A 9945223-G-A ***
9800003-C-T 9962394-C-T ***
9911370-T-A 10073761-T-A ***
9923879-T-C 10086270-T-C ***
9998044-G-T 10160435-G-T ***
10003247-T-C 10165638-T-C ***
8044315-C-A 8176274-C-A ***
7578599-T-C 7710558-T-C ***
4650248-A-G 4782207-A-G ***
6333609-A-G 6465568-A-G IR3_Dst ***
4734813-G-A 4866772-G-A ***
4740159-T-G 4872118-T-G ***
5404235-G-A 5536194-G-A ***
5490553-T-A 5622512-T-A ***
5684140-G-T 5816099-G-T ***
5932109-A-G 6064068-A-G ***
6174375-G-A 6306334-G-A IR3_Dst ***
6556912-T-A 6688871-T-A ***
7536060-A-G 7668019-A-G ***
6617997-A-T 6749956-A-T ***
6713765-A-T 6845724-A-T ***
6901473-G-A 7033432-G-A ***
6999386-A-C 7131345-A-C ***
7021739-C-T 7153698-C-T ***
7021747-T-C 7153706-T-C ***
7021748-G-A 7153707-G-A ***
7132437-G-T 7264396-G-T ***
59017324-ACACA-TCACG 56871177-ACACA-TCACG ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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