Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > ZZ12 > ZZ19 > Z31644 > FGC13109 > FGC13113 > FGC31444 > FGC39925 > 2894082-C-A

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
K4UVH
5311150-T-C 5443109-T-C FGC52923 +
7652665-A-G 7784624-A-G FGC52926 YY+
15533470-A-T 13421590-A-T FGC52927 YY*
59013975-C-CTT 56867828-C-CTT 11×T**
5659705-ATG-A 5791664-ATG-A **
4020003-C-T 4151962-C-T **
3872052-T-C 4004011-T-C **
14566032-G-A 12454232-G-A **
13535727-G-GTA 11380051-G-GTA **
58884468-A-G 56706403-T-C **
14726795-C-G 12614863-C-G **
22445739-G-A 20283853-G-A FGC19896 DYZ19 **
14726964-C-A 12615032-C-A **
58833385-T-C 56757486-A-G **
6931534-A-AAATCGGAATGAGTCAGGATGGAGTAGGT 7063493-A-AAATCGGAATGAGTCAGGATGGAGTAGGT **
15149411-G-A 13037498-G-A **
15184534-G-T 13072620-G-T **
15231638-G-A 13119724-G-A **
15598053-A-T 13486173-A-T **
22252029-C-T 20090143-C-T DYZ19 **
15627068-C-G 13515188-C-G **
13581082-G-A 11425406-G-A **
13520002-G-A 11364326-G-A **
13520014-T-C 11364338-T-C **
6750008-C-A 6881967-C-A **
18543910-T-C 16432030-T-C **
8824320-C-T 8956279-C-T **
8236818-A-G 8368777-A-G **
8176194-T-C 8308153-T-C **
7970133-A-T 8102092-A-T **
7275566-T-A 7407525-T-A **
13339405-G-A 11183729-G-A **
6724606-A-T 6856565-A-T **
22225648-C-G 20063762-C-G DYZ19 **
13423794-A-G 11268118-A-G **
5666413-G-C 5798372-G-C **
5554970-T-C 5686929-T-C **
22534767-T-C 20372881-T-C **
22534604-T-C 20372718-T-C **
13469900-A-G 11314224-A-G **
5346956-C-A 5478915-C-A **
13520001-A-C 11364325-A-C **
15673049-G-A 13561169-G-A **
9722247-T-C 9884638-T-C IR3_Prx **
21056137-G-A 18894251-G-A Z25248 **
17026808-T-C 14914928-T-C **
19331389-T-G 17219509-T-G **
16675510-T-C 14563630-T-C **
16618256-C-T 14506376-C-T **
21056130-C-A 18894244-C-A **
19310681-C-T 17198801-C-T **
18411593-T-C 16299713-T-C P6_Gap **
27982169-C-CATT 25836022-C-CATT P1_Y2 10×ATT**
16976508-G-C 14864628-G-C **
18132056-A-T 16020176-A-T **
18132054-C-T 16020174-C-T **
16065194-A-G 13953314-A-G **
21743982-A-T 19582096-A-T **
4682980-G-T 4814939-G-T **
59011654-C-G 56865507-C-G **
22215217-CTTTTTT-C 20053331-CTTTTTT-C 17×T**
18132099-C-T 16020219-C-T **
23049462-T-C 20887576-T-C ***
23028925-G-A 20867039-G-A ***
24163719-C-T 22017572-C-T P3_b1 ***
23521462-A-T 21359576-A-T ***
24080624-G-T 21934477-G-T P3_b1 ***
23111312-C-T 20949426-C-T ***
23181435-C-A 21019549-C-A ***
24096307-T-A 21950160-T-A P3_b1 ***
22883551-A-G 20721665-A-G ***
22840611-C-A 20678725-C-A ***
24096309-G-A 21950162-G-A P3_b1 ***
22541790-C-T 20379904-C-T ***
24096745-A-G 21950598-A-G P3_b1 ***
19436696-G-A 17324816-G-A ***
24115421-C-T 21969274-C-T P3_b1 ***
21966837-A-G 19804951-A-G ***
24182359-T-C 22036212-T-C P3_b1 ***
18795987-C-A 16684107-C-A ***
25065839-C-A 22919692-C-A g1 ***
24998192-T-C 22852045-T-C g1 ***
24996199-G-T 22850052-G-T g1 ***
24911967-T-A 22765820-T-A g1 ***
24837217-C-T 22691070-C-T P3_b2 ***
24759433-C-A 22613286-C-A P3_b2 ***
24605148-G-T 22459001-G-T P3_t2 ***
24599785-C-A 22453638-C-A P3_t2 ***
24578753-T-C 22432606-T-C P3_t2 ***
24578748-C-A 22432601-C-A P3_t2 ***
24578746-C-T 22432599-C-T P3_t2 ***
24182425-T-A 22036278-T-A P3_b1 ***
24578730-T-A 22432583-T-A P3_t2 ***
24578728-T-C 22432581-T-C P3_t2 ***
19026775-T-A 16914895-T-A ***
24385190-G-A 22239043-G-A ***
24354434-G-C 22208287-G-C P3_t1 ***
24329594-C-G 22183447-C-G P3_t1 ***
24311022-C-T 22164875-C-T P3_t1 ***
24257786-G-T 22111639-G-T P3_b1 ***
19555765-G-T 17443885-G-T ***
19436692-G-A 17324812-G-A ***
24244923-G-A 22098776-G-A P3_b1 ***
22534089-C-T 20372203-C-T ***
19582836-A-T 17470956-A-T P5_Prx ***
22267564-T-G 20105678-T-G DYZ19 ***
21056148-T-C 18894262-T-C ***
21078507-C-A 18916621-C-A ***
21171039-G-C 19009153-G-C ***
22338825-T-G 20176939-T-G DYZ19 ***
22296316-A-G 20134430-A-G DYZ19 ***
22276808-G-A 20114922-G-A DYZ19 ***
21240609-C-A 19078723-C-A ***
21347719-T-C 19185833-T-C ***
21420738-T-A 19258852-T-A ***
21448157-A-T 19286271-A-T ***
20842373-A-G 18680487-A-G P4_Dst ***
21449690-A-G 19287804-A-G ***
22255897-T-C 20094011-T-C DYZ19 ***
21449859-G-A 19287973-G-A ***
22249713-A-G 20087827-A-G DYZ19 ***
22242312-T-C 20080426-T-C DYZ19 ***
21830005-A-G 19668119-A-G ***
22222155-C-A 20060269-C-A DYZ19 ***
22195216-A-G 20033330-A-G ***
22051364-A-T 19889478-A-T ***
22017025-T-G 19855139-T-G ***
22448795-G-A 20286909-G-A DYZ19 ***
22449198-G-C 20287312-G-C DYZ19 ***
19800078-T-C 17688198-T-C P5_Prx ***
22508036-G-T 20346150-G-T DYZ19 ***
19800212-T-C 17688332-T-C P5_Prx ***
19874098-G-A 17762218-G-A P5_Prx ***
21999720-A-C 19837834-A-C ***
20252676-A-C 18090790-A-C P5_Dst ***
20558039-T-C 18396153-T-C P5_Dst ***
22533819-G-A 20371933-G-A ***
22511153-A-T 20349267-A-T DYZ19 ***
22511106-G-C 20349220-G-C DYZ19 ***
20558060-A-G 18396174-A-G P5_Dst ***
22486881-A-T 20324995-A-T DYZ19 ***
20615366-G-A 18453480-G-A P4_Prx ***
22485326-T-C 20323440-T-C DYZ19 ***
22483231-G-C 20321345-G-C DYZ19 ***
22483225-T-C 20321339-T-C DYZ19 ***
22479605-C-A 20317719-C-A DYZ19 ***
22471121-G-A 20309235-G-A DYZ19 ***
22461244-A-G 20299358-A-G DYZ19 ***
22460871-T-G 20298985-T-G DYZ19 ***
22449381-G-T 20287495-G-T DYZ19 ***
22449356-A-C 20287470-A-C DYZ19 ***
25089120-C-T 22942973-C-T g1 ***
22449313-G-T 20287427-G-T DYZ19 ***
26132790-A-G 23986643-A-G P1_Y1 ***
25100402-C-T 22954255-C-T g1 ***
13141110-TTCCATTCC-CTTCAATCG 10630596-TTCCATTCC-CTTCAATCG ***
13838873-AACT-GTCA 11718167-AACT-GTCA ***
13694634-CTGG-ATGA 11538958-CTGG-ATGA ***
13520001-AG-CA 11364325-AG-CA ***
13489728-TCTGGCC-ACCGGCG 11334052-TCTGGCC-ACCGGCG ***
13489701-CCGCA-TCGCG 11334025-CCGCA-TCGCG ***
13489614-CACC-AA 11333938-CACC-AA ***
13489120-CTGG-ATGA 11333444-CTGG-ATGA ***
13468105-AAGCCCCC-CAGACCCG 11312429-AAGCCCCC-CAGACCCG ***
13466899-CAAGA-AAAGT 11311223-CAAGA-AAAGT ***
13453222-TCCAA-CCGAT 11297546-TCCAA-CCGAT ***
13450318-TA-GC 11294642-TA-GC ***
13364145-TCA-T 11208469-TCA-T ***
13273750-TGAT-GGAA 11118074-TGAT-GGAA ***
13141093-CGTTTTGTTCCAT-TATTCTAC 10630579-CGTTTTGTTCCAT-TATTCTAC ***
14496303-G-GGATGGATA 12384508-G-GGATGGATA ***
13141080-TTCCGTT-CTCCTCC 10630566-TTCCGTT-CTCCTCC ***
13141003-CT-TG 10630489-CT-TG ***
9910057-AATTCTG-CAATCTC 10072448-AATTCTG-CAATCTC ***
9910036-CA-TC 10072427-CA-TC ***
9127506-CTTTTTTTTT-C 9289897-CTTTTTTTTT-C 22×T***
8221228-CTTTT-C 8353187-CTTTT-C 16×T***
8125086-G-GAAGAGAAGAA 8257045-G-GAAGAGAAGAA ***
8125077-A-AAGAGAAGAGC 8257036-A-AAGAGAAGAGC ***
8125074-G-GAGAAGAGAAA 8257033-G-GAGAAGAGAAA ***
7418073-CAAAAAA-C 7550032-CAAAAAA-C 22×A***
7002995-GAGGGTCC-CAGTGTCT 7134954-GAGGGTCC-CAGTGTCT ***
6931560-G-GGTAATCGGAATGAGTCAGGATGGAGTAC 7063519-G-GGTAATCGGAATGAGTCAGGATGGAGTAC ***
6915796-ATTTTTTTT-A 7047755-ATTTTTTTT-A 22×T***
13868599-ACG-CAT 11747893-ACG-CAT ***
14496310-T-TGGATGGAG 12384515-T-TGGATGGAG ***
5659701-GTGTA-G 5791660-GTGTA-G ***
22237665-TGT-AGG 20075779-TGT-AGG DYZ19 ***
59007958-TCAAAAAAA-T 56861811-TCAAAAAAA-T ***
58992638-GG-TT 56846491-GG-TT ***
58979727-CTCCATC-TTCCATT 56833580-CTCCATC-TTCCATT ***
58979304-AC-TA 56833157-AC-TA ***
58979276-CCCAT-TCCAC 56833129-CCCAT-TCCAC ***
28791279-CACGG-TATGC 26645132-CACGG-TATGC ***
28628484-TTA-T 26482337-TTA-T 11×TA***
24425334-C-CTCAT 22279187-C-CTCAT ***
23389531-CTTTTT-C 21227645-CTTTTT-C 18×T***
22745184-C-CA 20583298-C-CA ***
22511234-CAGTC-TAGGG 20349348-CAGTC-TAGGG DYZ19 ***
22508009-GATT-CATG 20346123-GATT-CATG DYZ19 ***
22449309-GGCAG-TGCAT 20287423-GGCAG-TGCAT DYZ19 ***
22237644-AGG-GGA 20075758-AGG-GGA DYZ19 ***
14496322-T-TGGATGGAG 12384527-T-TGGATGGAG ***
21553403-CTTT-C 19391517-CTTT-C 31×T***
19126435-C-CTACAAAAAAA 17014555-C-CTACAAAAAAA ***
18861371-CT-C 16749491-CT-C 11×T***
18132054-CTA-TTT 16020174-CTA-TTT ***
16063204-TTTC-T 13951324-TTTC-T ***
15931902-TGAT-CGAC 13820022-TGAT-CGAC ***
15931894-CAG-C 13820014-CAG-C ***
15931852-CG-C 13819972-CG-C ***
15931820-TGTA-ATC 13819940-TGTA-ATC ***
15931770-TGCTGATTA-CGCTTATTG 13819890-TGCTGATTA-CGCTTATTG ***
15263361-T-TTTAAAC 13151451-T-TTTAAAC ***
14937870-T-TTTCTTTTCTA 12825945-T-TTTCTTTTCTA ***
14612277-A-ATAGATAGC 12500483-A-ATAGATAGC ***
5828981-ACAC-A 5960940-ACAC-A ***
5346287-TTA-ATC 5478246-TTA-ATC ***
25147157-C-T 23001010-C-T g1 ***
26433123-G-T 24286976-G-T P1_Y1 ***
27248504-T-C 25102357-T-C P1_g3 ***
27202292-C-T 25056145-C-T P1_g3 ***
27001829-C-G 24855682-C-G P1_r4 ***
27001810-C-T 24855663-C-T P1_r4 ***
26971219-T-C 24825072-T-C P1_r4 ***
26954343-C-A 24808196-C-A P1_r3 ***
26835358-C-T 24689211-C-T P1_g2 ***
26665104-C-A 24518957-C-A P1_g2 ***
26606261-G-A 24460114-G-A P1_g2 ***
26574157-A-G 24428010-A-G P1_g2 ***
26560812-C-G 24414665-C-G P1_g2 ***
26536130-T-C 24389983-T-C P1_g2 ***
26516597-G-C 24370450-G-C P1_Y1 ***
26354455-C-T 24208308-C-T P1_Y1 ***
27302653-C-A 25156506-C-A P1_g3 ***
26321276-C-T 24175129-C-T P1_Y1 ***
26205991-G-T 24059844-G-T P1_Y1 ***
26134383-T-C 23988236-T-C P1_Y1 ***
26079102-G-T 23932955-G-T P1_Y1 ***
26043527-A-G 23897380-A-G P1_Y1 ***
25900155-C-T 23754008-C-T P1_Y1 ***
25885662-G-A 23739515-G-A P1_Y1 ***
25812996-C-A 23666849-C-A P1_b3 ***
25804633-G-A 23658486-G-A P1_b3 ***
25652117-C-A 23505970-C-A P1_b3 ***
25552284-G-A 23406137-G-A P1_gr1 ***
25357072-T-A 23210925-T-A P2_r2 ***
25323076-A-T 23176929-A-T P2_r1 ***
27267014-G-T 25120867-G-T P1_g3 ***
27304406-A-C 25158259-A-C P1_g3 ***
4983777-CTTTTT-C 5115736-CTTTTT-C 22×T***
58875716-A-T 56715155-T-A ***
4650472-G-GATATATATAT 4782431-G-GATATATATAT 24×AT***
2856782-CT-C 2988741-CT-C 24×T***
2789923-G-GT 2921882-G-GT 9×T***
58979288-GAC-CAT 56833141-GAC-CAT ***
7005821-C-CA 7137780-C-CA 9×A***
58992638-G-T 56846491-G-T ***
58979317-C-T 56833170-C-T ***
58909460-A-C 56681411-T-G ***
58895193-G-T 56695678-C-A ***
58892384-A-T 56698487-T-A ***
58891434-T-C 56699437-A-G ***
58890296-C-T 56700575-G-A ***
58883115-G-A 56707756-C-T ***
58860251-A-G 56730620-T-C ***
27340337-G-T 25194190-G-T P1_g3 ***
58840760-C-T 56750111-G-A ***
58838120-A-G 56752751-T-C ***
58829206-T-A 56761665-A-T ***
58823632-A-T 56767239-T-A ***
28332919-C-A 26186772-C-A P1_b4 ***
28332866-G-T 26186719-G-T P1_b4 ***
28302773-T-A 26156626-T-A P1_b4 ***
28239689-C-G 26093542-C-G P1_b4 ***
28120393-C-T 25974246-C-T P1_b4 ***
27988625-G-T 25842478-G-T P1_Y2 ***
27852291-C-G 25706144-C-G P1_Y2 ***
27496730-A-T 25350583-A-T P1_Y2 ***
27483079-T-A 25336932-T-A P1_Y2 ***
27474724-G-T 25328577-G-T P1_Y2 ***
18580016-G-C 16468136-G-C ***
22449418-A-T 20287532-A-T DYZ19 ***
18541970-A-G 16430090-A-G ***
2675216-T-A 2807175-T-A ***
4819598-T-G 4951557-T-G ***
4753880-T-A 4885839-T-A ***
4439534-G-A 4571493-G-A ***
3913830-G-T 4045789-G-T ***
3692720-T-C 3824679-T-C ***
3534482-G-T 3666441-G-T ***
3333484-A-C 3465443-A-C ***
2899839-C-A 3031798-C-A ***
2775124-A-T 2907083-A-T 14×T***
2775081-A-C 2907040-A-C ***
2699298-C-A 2831257-C-A ***
22465785-A-G 20303899-A-G DYZ19 ***
5047475-G-A 5179434-G-A ***
13466624-G-A 11310948-G-A ***
13466903-A-T 11311227-A-T ***
13466913-C-G 11311237-C-G ***
13869114-GGACTGGAG-TGATTTCAA 11748408-GGACTGGAG-TGATTTCAA ***
23076552-G-A 20914666-G-A ***
13141054-A-G 10630540-A-G ***
58979168-ATC-GGT 56833021-ATC-GGT ***
13468493-C-T 11312817-C-T ***
13141084-G-T 10630570-G-T ***
22366323-AG-CT 20204437-AG-CT DYZ19 ***
13141103-C-T 10630589-C-T ***
13448576-CTCTAT-TTCCAC 11292900-CTCTAT-TTCCAC ***
4843581-A-G 4975540-A-G ***
5130584-C-G 5262543-C-G ***
22269313-AAC-CAG 20107427-AAC-CAG DYZ19 ***
7002885-G-T 7134844-G-T ***
8174388-C-G 8306347-C-G ***
8110869-A-T 8242828-A-T ***
8005539-C-A 8137498-C-A ***
7476198-A-T 7608157-A-T IR1_L ***
7474963-T-A 7606922-T-A IR1_L ***
7344544-T-C 7476503-T-C ***
7122417-C-T 7254376-C-T ***
7122350-T-G 7254309-T-G ***
7122341-A-G 7254300-A-G ***
7002904-G-A 7134863-G-A ***
7002903-T-G 7134862-T-G ***
7002896-T-A 7134855-T-A ***
6720739-G-T 6852698-G-T ***
5130602-C-T 5262561-C-T ***
6712939-A-G 6844898-A-G Z41917 ***
6710576-T-A 6842535-T-A ***
6247764-T-A 6379723-T-A IR3_Dst ***
6204807-A-C 6336766-A-C IR3_Dst ***
6179665-C-A 6311624-C-A IR3_Dst ***
5885955-C-A 6017914-C-A ***
5883947-G-A 6015906-G-A ***
5479847-T-C 5611806-T-C ***
5476031-A-T 5607990-A-T ***
5475000-A-G 5606959-A-G ***
5197254-A-G 5329213-A-G ***
5197237-G-T 5329196-G-T ***
13448786-CA-TT 11293110-CA-TT ***
13456022-T-TCCATA 11300346-T-TCCATA ***
8807180-T-C 8939139-T-C ***
22301823-A-T 20139937-A-T DYZ19 ***
5240978-C-CCCTT 5372937-C-CCCTT 5×CTTT***
13709781-T-G 11554105-T-G ***
13709774-G-C 11554098-G-C ***
14101215-C-T 11980509-C-T ***
59023288-A-C 56877141-A-C ***
59018426-A-T 56872279-A-T ***
59018408-T-A 56872261-T-A ***
59018289-A-C 56872142-A-C ***
59018121-T-C 56871974-T-C ***
59010023-A-C 56863876-A-C ***
22474107-T-G 20312221-T-G DYZ19 ***
13329879-AATAT-A 11174203-AATAT-A 25×AT***
25628522-C-A 23482375-C-A P1_b3 ***
9910104-C-G 10072495-C-G ***
59019545-CACACACAA-C 56873398-CACACACAA-C ***
59018847-C-G 56872700-C-G ***
13518920-G-A 11363244-G-A ***
13518902-T-C 11363226-T-C ***
13518879-C-G 11363203-C-G ***
13233319-GAAAA-G 11077643-GAAAA-G 17×A***
13535639-GTATATA-G 11379963-GTATATA-G 21×TA***
13480582-CCA-GCG 11324906-CCA-GCG ***
23234708-C-CT 21072822-C-CT 17×TTCT***
58858773-A-T 56732098-T-A ***
13869807-T-A 11749101-T-A ***
13713645-T-A 11557969-T-A ***
13448162-TTCCAG-CTCCAC 11292486-TTCCAG-CTCCAC ***
22315084-T-G 20153198-T-G DYZ19 ***
13459323-T-G 11303647-T-G ***
7002914-A-G 7134873-A-G ***
13868585-GA-CG 11747879-GA-CG ***
58823356-C-T 56767515-G-A ***
58823244-G-C 56767627-C-G ***
58874792-T-C 56716079-A-G ***
22446611-TT-GA 20284725-TT-GA DYZ19 ***
58875819-C-G 56715052-G-C ***
13468498-C-T 11312822-C-T ***
58909404-T-A 56681467-A-T ***
13489207-GAAGA-TAAGG 11333531-GAAGA-TAAGG ***
22509606-T-G 20347720-T-G DYZ19 ***
26906666-T-A 24760519-T-A P1_r3 ***
5813113-C-T 5945072-C-T ***
13459332-A-T 11303656-A-T ***
58853726-T-A 56737145-A-T ***
13486612-AG-GT 11330936-AG-GT ***
13471944-GGGC-CGGT 11316268-GGGC-CGGT ***
13472014-C-T 11316338-C-T ***
13472005-G-A 11316329-G-A ***
26713740-C-T 24567593-C-T P1_g2 ***
58859378-C-A 56731493-G-T ***
58916072-G-C 56674799-C-G ***
9910872-T-G 10073263-T-G ***
58874703-G-T 56716168-C-A ***
26906632-T-A 24760485-T-A P1_r3 ***
13459337-A-T 11303661-A-T ***
8785943-C-T 8917902-C-T ***
8811523-A-C 8943482-A-C ***
18492176-T-G 16380296-T-G P6_Dst ***
15117794-T-A 13005881-T-A ***
15931947-T-C 13820067-T-C ***
15931925-A-G 13820045-A-G ***
15931905-T-C 13820025-T-C ***
15931902-T-C 13820022-T-C ***
15921468-A-G 13809588-A-G ***
15643496-A-T 13531616-A-T ***
15626844-A-C 13514964-A-C ***
15626835-G-T 13514955-G-T ***
15298679-C-T 13186778-C-T ***
15147320-C-A 13035407-C-A ***
15120502-A-C 13008589-A-C ***
14961041-T-C 12849116-T-C ***
15931978-G-A 13820098-G-A ***
14696075-T-A 12584141-T-A 9×A***
14687332-G-T 12575398-G-T ***
14101242-C-T 11980536-C-T ***
13857379-T-G 11736673-T-G ***
13838886-G-C 11718180-G-C ***
13737096-T-G 11581420-T-G ***
13737052-G-A 11581376-G-A ***
13728503-T-A 11572827-T-A ***
13714778-T-C 11559102-T-C ***
13707627-C-G 11551951-C-G ***
13705956-A-C 11550280-A-C ***
13705954-G-A 11550278-G-A ***
15931953-A-G 13820073-A-G ***
16000404-T-G 13888524-T-G ***
13704183-G-T 11548507-G-T ***
16994390-A-C 14882510-A-C ***
18411596-T-C 16299716-T-C P6_Gap ***
18317848-G-T 16205968-G-T P6_Prx ***
18277294-T-G 16165414-T-G P6_Prx ***
18274462-A-T 16162582-A-T P6_Prx ***
18057907-A-G 15946027-A-G ***
17965829-T-C 15853949-T-C ***
17858961-G-T 15747081-G-T ***
17700159-C-A 15588279-C-A ***
17617791-T-A 15505911-T-A ***
17323536-T-A 15211656-T-A ***
17258171-T-C 15146291-T-C ***
17127253-A-C 15015373-A-C ***
16785148-C-T 14673268-C-T ***
16002751-A-C 13890871-A-C ***
13703661-G-C 11547985-G-C ***
16540109-C-T 14428229-C-T ***
16430485-T-C 14318605-T-C ***
16421852-C-G 14309972-C-G ***
16356191-T-A 14244311-T-A ***
16321957-A-T 14210077-A-T ***
16169619-T-G 14057739-T-G ***
16135538-A-G 14023658-A-G P8_Dst ***
16135482-G-T 14023602-G-T P8_Dst ***
16135467-G-C 14023587-G-C P8_Dst ***
16026258-G-A 13914378-G-A ***
16026243-G-C 13914363-G-C ***
13705944-G-A 11550268-G-A ***
13704098-T-A 11548422-T-A ***
9034070-T-A 9196461-T-A ***
9910036-C-T 10072427-C-T ***
9910107-T-A 10072498-T-A ***
9910103-T-G 10072494-T-G ***
9910098-A-C 10072489-A-C ***
9910092-T-A 10072483-T-A ***
9910083-G-C 10072474-G-C ***
9910071-T-C 10072462-T-C ***
9910063-G-C 10072454-G-C ***
9910059-T-A 10072450-T-A ***
9910057-A-C 10072448-A-C ***
9910045-A-G 10072436-A-G ***
9910037-A-C 10072428-A-C ***
9706050-T-A 9868441-T-A IR3_Prx ***
9910120-T-A 10072511-T-A ***
9696618-C-T 9859009-C-T IR3_Prx ***
9692653-G-A 9855044-G-A IR3_Prx ***
9622437-T-A 9784828-T-A IR3_Prx ***
9596360-C-A 9758751-C-A IR3_Prx ***
9576324-A-C 9738715-A-C IR3_Prx ***
9555588-A-C 9717979-A-C IR3_Prx ***
9541589-A-G 9703980-A-G IR3_Prx ***
9431249-G-T 9593640-G-T ***
9412804-C-A 9575195-C-A ***
9232474-G-A 9394865-G-A ***
9207487-G-A 9369878-G-A ***
9202674-C-T 9365065-C-T ***
9910114-T-C 10072505-T-C ***
9910143-T-C 10072534-T-C ***
13700298-A-G 11544622-A-G ***
13141159-A-C 10630645-A-C ***
13697430-A-G 11541754-A-G ***
13489718-C-A 11334042-C-A ***
13469141-A-C 11313465-A-C ***
13469125-A-G 11313449-A-G ***
13468046-T-C 11312370-T-C ***
13466927-G-A 11311251-G-A ***
13463310-G-C 11307634-G-C ***
13452200-A-C 11296524-A-C ***
13448803-C-T 11293127-C-T ***
13441444-A-G 11285768-A-G ***
13347948-C-T 11192272-C-T ***
13254344-C-T 11098668-C-T ***
13141149-A-T 10630635-A-T ***
9910153-T-A 10072544-T-A ***
13141144-A-T 10630630-A-T ***
13141110-T-C 10630596-T-C ***
13141086-T-C 10630572-T-C ***
13141085-T-C 10630571-T-C ***
13141080-T-C 10630566-T-C ***
13141004-T-G 10630490-T-G ***
13141003-C-T 10630489-C-T ***
13140990-T-A 10630476-T-A ***
10080090-G-T 10242481-G-T ***
10070537-G-A 10232928-G-A ***
10021173-A-C 10183564-A-C ***
9971500-C-A 10133891-C-A ***
16675677-T-G 14563797-T-G ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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