Tree Position

R-P312/S116 > Z40481 > ZZ11 > U152/S28 > L2/S139 > Z367/S255 > Z34/S368 > Z33/S212 > b38:24139911C>G > BY3604 > 6865764-G-A

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
36943
BigY2
36943
22289710-T-C 20127824-T-C DYZ19 ***A*
13687343-A-G 11531667-A-G A*
23024428-G-GA 20862542-G-GA 10×AA*
23771877-G-GT 21609991-G-GT 10×TA*
23241342-G-A 21079456-G-A Y++
23964085-TAAAC-T 21817938-TAAAC-T ++
22469692-G-C 20307806-G-C BY31346 DYZ19 ++
22442839-T-C 20280953-T-C DYZ19 +
28783031-T-C 26636884-T-C +
9693302-A-T 9855693-A-T IR3_Prx +
17936783-C-T 15824903-C-T YY+
15991851-C-T 13879971-C-T YY++
15727850-C-T 13615970-C-T YY+**
14364680-A-G 12243975-A-G CTS2557 YY*
22299606-T-G 20137720-T-G DYZ19 ****
14581022-G-A 12469222-G-A **
14581018-G-A 12469218-G-A **
14581015-C-T 12469215-C-T **
14589918-A-G 12478118-A-G **
10984476-G-C **
14649456-C-A 12537521-C-A **
14607988-T-TG 12496190-T-TG **
14570753-AAC-A 12458953-AAC-A **
23779805-G-A 21617919-G-A **
14701228-G-A 12589294-G-A **
14701232-A-T 12589298-A-T **
14701272-G-T 12589338-G-T **
14701276-A-T 12589342-A-T **
14701279-A-C 12589345-A-C **
14701281-T-A 12589347-T-A **
14579457-C-A 12467657-C-A **
14544120-T-C 12432321-T-C **
14552312-T-C 12440513-T-C **
14136134-T-A 12015428-T-A **
13887434-G-C 11766728-G-C **
13930546-G-C 11809840-G-C **
13930555-A-C 11809849-A-C **
13937141-C-A 11816435-C-A **
13976391-C-T 11855685-C-T **
14008788-A-C 11888082-A-C **
23808039-A-C 21646153-A-C **
14050022-C-A 11929316-C-A **
14053637-A-G 11932931-A-G **
14136113-G-A 12015407-G-A **
14136115-G-A 12015409-G-A **
14136181-G-A 12015475-G-A **
14701299-T-C 12589365-T-C **
14136182-T-C 12015476-T-C **
14379334-G-T 12258630-G-T **
14430626-C-T 12309899-C-T **
14431155-C-T 12310428-C-T **
14431192-C-G 12310465-C-G **
14452808-T-A 12332081-T-A **
14465355-T-A 12344628-T-A **
14516791-C-A 12404992-C-A **
14518381-T-A 12406582-T-A **
14527537-C-A 12415738-C-A **
14544094-C-T 12432295-C-T **
14544097-A-T 12432298-A-T **
14701295-A-C 12589361-A-C **
23315982-G-A 21154096-G-A **
14727355-G-T 12615423-G-T **
16342583-G-T 14230703-G-T **
16146486-A-C 14034606-A-C P8_Dst **
16146545-C-A 14034665-C-A P8_Dst **
16146548-T-G 14034668-T-G P8_Dst **
16146549-A-C 14034669-A-C P8_Dst **
16164475-A-T 14052595-A-T P8_Dst **
16164476-A-ATAC 14052596-A-ATAC P8_Dst **
16179732-C-A 14067852-C-A **
16270423-G-A 14158543-G-A **
16272211-A-G 14160331-A-G **
16342584-G-A 14230704-G-A **
16101995-T-G 13990115-T-G P8_Prx **
16344590-T-G 14232710-T-G **
16382296-C-A 14270416-C-A **
16466585-G-T 14354705-G-T **
16508751-C-A 14396871-C-A **
16554771-C-G 14442891-C-G **
16560009-T-A 14448129-T-A **
16623940-C-G 14512060-C-G **
16623968-T-C 14512088-T-C **
23205013-T-G 21043127-T-G **
16101998-T-TA 13990118-T-TA P8_Prx **
16044930-T-G 13933050-T-G **
14743507-C-A 12631576-C-A **
15424339-C-G 13312459-C-G **
14755633-A-T 12643702-A-T **
14888160-C-G 12776226-C-G **
23442720-A-G 21280834-A-G **
15102437-G-T 12990525-G-T **
13887426-T-G 11766720-T-G **
15193655-C-A 13081741-C-A **
15202331-ATT-A 13090417-ATT-A 10×T**
15262452-T-A 13150536-T-A **
15280188-C-A 13168287-C-A **
15469221-A-G 13357341-A-G **
16044761-A-T 13932881-A-T **
15566788-C-A 13454908-C-A **
15744008-C-A 13632128-C-A **
15775869-G-A 13663989-G-A **
15775873-T-G 13663993-T-G **
15775887-C-A 13664007-C-A **
15786496-G-A 13674616-G-A **
15858359-C-A 13746479-C-A **
15942958-A-C 13831078-A-C **
15985546-C-A 13873666-C-A **
16007174-A-T 13895294-A-T **
13887428-T-G 11766722-T-G **
13855714-G-C 11735008-G-C **
13887412-A-T 11766706-A-T **
11013203-C-T **
10973597-C-G **
10975410-C-T **
10977222-C-A **
10978853-C-A **
24485797-A-C 22339650-A-C **
10986589-G-A **
10994370-T-C **
10997744-C-CGGAAG **
10997770-A-T **
11013249-A-G **
10949768-C-A **
11018721-C-A **
11019118-C-A **
11021588-A-C **
11024864-T-A **
11024866-T-G **
11024868-C-G **
11024881-T-C **
11024882-T-A **
11024887-T-A **
10971215-G-C **
10944936-C-T **
11024891-T-G **
10929564-C-A **
10912266-G-T **
10912282-C-T **
10912284-T-A **
10912300-C-T **
10912308-T-C **
10912323-T-A **
10912334-GC-G **
10916143-C-A **
10926719-A-C **
10930564-T-C **
10944784-C-A **
10937687-C-A **
10937704-C-A **
10938624-C-A **
10938754-C-A **
10940306-C-A **
10942633-A-T **
10943358-C-T **
10943369-T-A **
10943396-CATTCT-C **
11024890-T-C **
11025875-C-A **
13887410-T-C 11766704-T-C **
11654167-T-C **
13587856-G-A 11432180-G-A **
13637470-T-C 11481794-T-C **
13643505-C-A 11487829-C-A **
13643773-T-C 11488097-T-C **
13698493-G-T 11542817-G-T **
13698499-A-C 11542823-A-C **
11647871-G-T **
11647919-T-G **
11650687-G-C **
11664072-A-G **
13555641-C-A 11399965-C-A **
13848218-C-T 11727512-C-T **
13855647-A-T 11734941-A-T **
13855695-G-T 11734989-G-T **
16847499-C-A 14735619-C-A **
13855716-A-T 11735010-A-T **
13870658-A-G 11749952-A-G **
13885412-A-T 11764706-A-T **
13885415-C-G 11764709-C-G **
13885421-G-A 11764715-G-A Y36999 **
13567161-T-A 11411485-T-A **
13555624-T-G 11399948-T-G **
13198819-A-T 11043143-A-T **
13295059-C-A 11139383-C-A **
13199340-C-T 11043664-C-T **
13216627-A-T 11060951-A-T **
24458682-G-T 22312535-G-T **
13234449-G-A 11078773-G-A **
13235590-G-C 11079914-G-C **
13235593-A-T 11079917-A-T **
13253515-C-A 11097839-C-A **
13253517-A-T 11097841-A-T **
13258675-C-A 11102999-C-A **
13321883-A-G 11166207-A-G **
13555621-T-A 11399945-T-A **
13457576-C-T 11301900-C-T **
13465541-C-A 11309865-C-A **
13466062-C-A 11310386-C-A **
24210552-C-A 22064405-C-A P3_b1 **
13484514-C-T 11328838-C-T **
13487719-C-T 11332043-C-T **
13551309-T-C 11395633-T-C **
13555598-C-A 11399922-C-A **
13555602-A-C 11399926-A-C **
16706811-G-T 14594931-G-T **
17165254-A-C 15053374-A-C F21446 **
16847653-T-C 14735773-T-C **
22997877-T-G 20835991-T-G **
21002533-C-G 18840647-C-G P4_Dst **
21002538-T-TTA 18840652-T-TTA P4_Dst **
21009156-C-T 18847270-C-T P4_Dst **
21009157-G-C 18847271-G-C P4_Dst **
21009161-G-T 18847275-G-T P4_Dst **
21009172-A-ATC 18847286-A-ATC P4_Dst **
21134296-C-T 18972410-C-T **
21140049-A-G 18978163-A-G **
23009414-T-C 20847528-T-C **
22775215-A-T 20613329-A-T **
20993598-C-A 18831712-C-A P4_Dst 17×A**
21189594-C-A 19027708-C-A **
21224871-C-A 19062985-C-A **
21234692-C-T 19072806-C-T **
21234697-A-C 19072811-A-C **
21283319-G-A 19121433-G-A **
21283334-T-A 19121448-T-A **
21283340-T-A 19121454-T-A **
21283343-C-G 19121457-C-G **
21283384-A-G 19121498-A-G **
20995546-T-TCTTAC 18833660-T-TCTTAC P4_Dst 11×CTTTC**
20993596-T-G 18831710-T-G P4_Dst **
21328677-G-C 19166791-G-C **
20567644-A-T 18405758-A-T P5_Dst **
20248137-T-TTA 18086251-T-TTA P5_Dst **
20312724-T-A 18150838-T-A P5_Dst **
20312738-C-A 18150852-C-A P5_Dst **
20312743-A-T 18150857-A-T P5_Dst **
20312746-A-T 18150860-A-T P5_Dst **
20312787-C-G 18150901-C-G P5_Dst 16×T**
20312789-T-TAG 18150903-T-TAG P5_Dst **
20567640-A-G 18405754-A-G P5_Dst **
20567642-G-A 18405756-G-A P5_Dst **
20567657-T-A 18405771-T-A P5_Dst **
20993582-C-T 18831696-C-T P4_Dst **
20567660-T-A 18405774-T-A P5_Dst **
20567663-A-T 18405777-A-T P5_Dst **
20567666-A-T 18405780-A-T P5_Dst **
20567704-T-TATG 18405818-T-TATG P5_Dst **
20579347-C-CAGAAAA 18417461-C-CAGAAAA P5_Dst **
20741917-T-A 18580031-T-A P4_Prx **
20966520-A-G 18804634-A-G P4_Dst **
20966527-T-A 18804641-T-A P4_Dst **
20993580-C-G 18831694-C-G P4_Dst **
21283388-A-C 19121502-A-C **
21371524-T-C 19209638-T-C **
20248130-T-A 18086244-T-A P5_Dst **
22260544-G-T 20098658-G-T DYZ19 **
22155661-C-G 19993775-C-G **
22165077-G-T 20003191-G-T **
22165192-G-T 20003306-G-T **
22167354-C-A 20005468-C-A **
22774955-T-A 20613069-T-A **
22244141-A-C 20082255-A-C DYZ19 **
22244147-C-A 20082261-C-A DYZ19 **
22244159-A-T 20082273-A-T DYZ19 **
22244160-C-A 20082274-C-A DYZ19 **
22277799-C-T 20115913-C-T DYZ19 **
21984053-C-T 19822167-C-T **
22277802-A-T 20115916-A-T DYZ19 **
22319289-A-AAAAC 20157403-A-AAAAC DYZ19 **
22319290-GTCCTT-G 20157404-GTCCTT-G DYZ19 **
22442925-C-T 20281039-C-T DYZ19 **
22489069-C-T 20327183-C-T DYZ19 **
22774933-C-T 20613047-C-T **
22529579-T-G 20367693-T-G **
22529595-C-T 20367709-C-T **
22548383-C-T 20386497-C-T **
22067628-T-C 19905742-T-C **
21915693-A-G 19753807-A-G **
21394581-T-C 19232695-T-C **
21697175-C-A 19535289-C-A **
21419420-G-A 19257534-G-A **
21419443-C-A 19257557-C-A **
21457698-A-C 19295812-A-C **
21457712-T-C 19295826-T-C **
21457716-A-T 19295830-A-T **
21514027-GC-G 19352141-GC-G **
21526929-A-G 19365043-A-G **
22774959-A-T 20613073-A-T **
21617740-C-A 19455854-C-A **
21708315-T-G 19546429-T-G **
21915690-T-A 19753804-T-A **
21713465-T-C 19551579-T-C **
21713477-T-G 19551591-T-G **
21902139-T-C 19740253-T-C **
21902187-G-C 19740301-G-C **
21902193-G-C 19740307-G-C **
21902206-A-C 19740320-A-C **
21915667-A-G 19753781-A-G **
21915669-A-G 19753783-A-G **
21915684-C-G 19753798-C-G **
20248132-T-A 18086246-T-A P5_Dst **
20248116-C-G 18086230-C-G P5_Dst **
16922184-A-C 14810304-A-C **
17715455-C-A 15603575-C-A **
17552010-G-T 15440130-G-T **
17560645-C-A 15448765-C-A **
17617034-C-A 15505154-C-A **
17617293-C-A 15505413-C-A **
17618381-G-T 15506501-G-T **
17629818-C-A 15517938-C-A **
17652135-G-T 15540255-G-T **
17654904-C-A 15543024-C-A **
17707383-A-AGAG 15595503-A-AGAG **
17782546-T-A 15670666-T-A **
17552001-T-G 15440121-T-G **
17782547-G-C 15670667-G-C **
17782550-A-T 15670670-A-T **
17782553-T-C 15670673-T-C **
17782569-G-A 15670689-G-A **
17782573-T-G 15670693-T-G **
23011057-A-C 20849171-A-C **
17963688-T-C 15851808-T-C **
23011055-T-G 20849169-T-G **
18130531-C-A 16018651-C-A **
17552005-A-C 15440125-A-C **
17543732-G-T 15431852-G-T **
18184821-G-T 16072941-G-T **
17244324-A-C 15132444-A-C **
16938473-C-A 14826593-C-A **
17013048-A-T 14901168-A-T **
17165201-G-C 15053321-G-C **
17165245-G-T 15053365-G-T **
10880442-C-A **
17165272-A-G 15053392-A-G **
23127634-C-A 20965748-C-A **
23048363-C-A 20886477-C-A **
17231356-G-T 15119476-G-T **
17246869-A-G 15134989-A-G **
17514038-A-G 15402158-A-G **
17246875-A-C 15134995-A-C **
17246917-C-T 15135037-C-T **
17246922-T-G 15135042-T-G **
17246923-C-T 15135043-C-T **
17246936-G-T 15135056-G-T **
17297092-T-C 15185212-T-C **
17297093-C-T 15185213-C-T **
17374556-T-G 15262676-T-G **
17402550-G-T 15290670-G-T **
18183230-T-A 16071350-T-A **
18283642-C-A 16171762-C-A P6_Prx **
20248114-C-A 18086228-C-A P5_Dst **
19719329-A-AGAG 17607449-A-AGAG P5_Prx **
19464147-T-C 17352267-T-C **
19507137-T-G 17395257-T-G **
19528409-C-A 17416529-C-A **
23011053-C-T 20849167-C-T **
19610347-C-T 17498467-C-T P5_Prx **
19647586-T-C 17535706-T-C P5_Prx **
19647588-G-T 17535708-G-T P5_Prx **
19719312-A-C 17607432-A-C P5_Prx **
19719314-A-G 17607434-A-G P5_Prx **
19719334-A-AGT 17607454-A-AGT P5_Prx **
19429540-C-G 17317660-C-G **
19788237-C-G 17676357-C-G P5_Prx **
19788263-T-A 17676383-T-A P5_Prx **
19788264-G-A 17676384-G-A P5_Prx **
19788304-C-A 17676424-C-A P5_Prx **
19788307-A-AG 17676427-A-AG P5_Prx **
19795142-A-T 17683262-A-T P5_Prx **
20027907-G-A 17916027-G-A P5_Prx **
20231658-G-T 18069772-G-T P5_Dst **
20248112-T-A 18086226-T-A P5_Dst **
19444201-C-A 17332321-C-A **
19394118-G-T 17282238-G-T **
18406880-T-A 16295000-T-A P6_Gap **
18672567-G-A 16560687-G-A **
18410556-A-C 16298676-A-C P6_Gap **
18410559-A-C 16298679-A-C P6_Gap **
18410578-T-C 16298698-T-C P6_Gap **
18578019-G-C 16466139-G-C **
18578021-T-A 16466141-T-A **
18628282-T-C 16516402-T-C **
18672473-C-A 16560593-C-A **
18672560-T-G 16560680-T-G **
18672566-T-G 16560686-T-G **
18728822-G-A 16616942-G-A **
19379619-C-A 17267739-C-A **
18736165-C-A 16624285-C-A **
18838819-G-C 16726939-G-C **
18864568-C-A 16752688-C-A **
18891011-G-T 16779131-G-T **
18966041-G-T 16854161-G-T **
19040806-A-G 16928926-A-G **
19065522-G-T 16953642-G-T **
19107372-C-A 16995492-C-A **
19107398-A-T 16995518-A-T **
19299519-C-A 17187639-C-A **
10898492-C-A **
10847506-C-A **
10875911-C-A **
28560751-C-A 26414604-C-A **
10010596-G-T 10172987-G-T **
13473745-G-A 11318069-G-A **
21153239-C-A 18991353-C-A **
20312785-A-T 18150899-A-T P5_Dst **
15262456-C-A 13150540-C-A **
11013198-T-C **
26478014-G-C 24331867-G-C P1_Y1 **
16424843-G-T 14312963-G-T **
26328701-C-A 24182554-C-A P1_Y1 **
14711802-C-A 12599869-C-A **
23360573-C-A 21198687-C-A **
19529372-C-A 17417492-C-A **
15732952-C-A 13621072-C-A **
10943335-C-A **
24671177-T-A 22525030-T-A P3_b2 **
22542481-C-A 20380595-C-A **
10919202-G-T **
15424328-C-A 13312448-C-A **
15477277-G-A 13365397-G-A **
13474093-ACT-C 11318417-ACT-C **
7225386-T-C 7357345-T-C **
26740610-C-A 24594463-C-A P1_g2 **
27423944-C-T 25277797-C-T P1_g3 **
23128001-C-A 20966115-C-A **
16860748-G-A 14748868-G-A **
15477278-C-A 13365398-C-A **
10663792-C-A **
13255186-C-A 11099510-C-A **
10755389-CTCATCTCTGT-C **
10755418-A-ACTCCT **
21972205-C-A 19810319-C-A **
4666013-C-A 4797972-C-A **
27423940-C-A 25277793-C-A P1_g3 **
11021594-T-C **
15717804-C-A 13605924-C-A **
17297119-G-T 15185239-G-T **
20689836-T-C 18527950-T-C P4_Prx **
26740612-C-G 24594465-C-G P1_g2 **
7033435-C-A 7165394-C-A **
27916471-G-A 25770324-G-A P1_Y2 **
18539045-G-A 16427165-G-A **
10780592-C-G **
27920-T-G **
13253520-C-G 11097844-C-G **
26248377-C-CGG 24102230-C-CGG P1_Y1 **
13698517-G-T 11542841-G-T **
20662680-G-T 18500794-G-T P4_Prx **
17950775-C-A 15838895-C-A **
3229117-C-A 3361076-C-A **
18672558-A-C 16560678-A-C **
20334790-G-T 18172904-G-T P5_Dst **
19967075-A-T 17855195-A-T P5_Prx **
16581-G-A **
21360323-C-A 19198437-C-A **
13466075-C-G 11310399-C-G **
11013212-C-T **
4326426-C-A 4458385-C-A **
2810420-T-C 2942379-T-C **
8481059-A-T 8613018-A-T YFS032927 **
2847242-C-A 2979201-C-A **
2930299-A-C 3062258-A-C **
2930312-A-T 3062271-A-T **
2930317-A-G 3062276-A-G **
26129761-TTTT-C 23983614-TTTT-C P1_Y1 **
3086516-C-A 3218475-C-A **
3111261-G-C 3243220-G-C **
3158009-G-T 3289968-G-T **
3340691-C-A 3472650-C-A **
10912302-T-G **
13316100-C-A 11160424-C-A **
19795145-A-AT 17683265-A-AT P5_Prx **
16101997-T-C 13990117-T-C P8_Prx **
10943353-C-A **
15402925-C-A 13291045-C-A **
15790423-C-A 13678543-C-A **
10899228-C-A **
14516800-C-A 12405001-C-A **
6886918-C-A 7018877-C-A **
11021599-G-C **
9056901-G-T **
17370804-C-A 15258924-C-A **
26154430-A-AG 24008283-A-AG P1_Y1 **
23420610-A-C 21258724-A-C **
15358675-T-A 13246794-T-A **
6096363-C-A 6228322-C-A **
25970738-C-CTA 23824591-C-CTA P1_Y1 **
10759983-T-C **
13698519-A-C 11542843-A-C **
17165268-C-T 15053388-C-T **
10824019-C-A **
6996660-C-A 7128619-C-A **
10926699-A-ACTCCACTC **
10926702-C-CTG **
20248129-T-C 18086243-T-C P5_Dst **
28760171-C-A 26614024-C-A **
10873212-C-A **
28570413-A-G 26424266-A-G **
28706368-T-G 26560221-T-G **
28706347-T-G 26560200-T-G **
28706345-T-G 26560198-T-G **
28656921-C-A 26510774-C-A **
28633652-C-A 26487505-C-A **
28627177-G-C 26481030-G-C **
28627168-A-T 26481021-A-T **
28598466-A-T 26452319-A-T **
28575217-G-T 26429070-G-T **
28547340-A-T 26401193-A-T **
28726021-G-A 26579874-G-A **
28547338-A-T 26401191-A-T **
28547325-A-C 26401178-A-C **
28547319-A-C 26401172-A-C **
13462244-C-T 11306568-C-T **
19293769-TCAA-T 17181889-TCAA-T **
7225502-C-A 7357461-C-A **
5675507-G-T 5807466-G-T **
10762883-C-A **
28520617-G-T 26374470-G-T **
28706371-T-A 26560224-T-A **
16045738-C-A 13933858-C-A **
6827035-G-T 6958994-G-T **
9852807-C-T 10015198-C-T Z13054 **
13143139-T-C 10632625-T-C **
56850429-T-A **
6435200-G-T 6567159-G-T **
56844889-A-T **
56839402-G-C **
6037524-C-T 6169483-C-T PF169 **
56834899-G-T **
8481060-T-A 8613019-T-A YFS032928 **
4700900-C-A 4832859-C-A **
7645155-G-A 7777114-G-A **
18972172-TAATAAATA-T 16860292-TAATAAATA-T 9×AATA**
56830441-G-T **
56763476-G-T **
22023233-T-C 19861347-T-C Z27546 **
56756845-A-C **
25395853-T-A 23249706-T-A P2_r2 **
14452734-T-G 12332007-T-G Y26615 **
28767283-G-A 26621136-G-A **
28728497-T-C 26582350-T-C **
28727714-C-A 26581567-C-A **
56763489-AT-A **
10892121-T-C **
10759964-C-T **
13225830-C-A 11070154-C-A **
28464901-CTT-C 26318754-CTT-C 15×T**
17165270-A-C 15053390-A-C **
13698515-G-T 11542839-G-T **
10755427-C-T **
10892118-A-T **
22427997-A-T 20266111-A-T DYZ19 **
10884494-ATCCAC-A **
17014351-C-A 14902471-C-A **
10813038-G-GCAAAC **
17884803-C-A 15772923-C-A **
10912301-T-A **
27971847-C-A 25825700-C-A P1_Y2 **
10883396-G-T **
17552011-C-A 15440131-C-A **
23848084-G-T 21686198-G-T **
15677461-G-T 13565581-G-T **
15305801-C-A 13193900-C-A **
21677010-C-A 19515124-C-A **
28627175-T-C 26481028-T-C **
27937651-C-G 25791504-C-G P1_Y2 **
17716727-G-A 15604847-G-A **
21915638-C-A 19753752-C-A **
4002992-C-A 4134951-C-A **
14224142-C-A 12103436-C-A **
17552008-A-T 15440128-A-T **
10882157-G-T **
10967537-C-A **
10912286-C-T **
15866082-T-A 13754202-T-A **
10851155-G-C **
13937166-C-A 11816460-C-A **
22629704-C-A 20467818-C-A **
19415357-C-A 17303477-C-A **
28725991-A-T 26579844-A-T **
28485892-C-A 26339745-C-A **
13953214-T-C 11832508-T-C **
22871357-C-A 20709471-C-A **
10892101-T-C **
10892105-C-G **
7270306-C-A 7402265-C-A **
10912265-G-C **
3334644-G-T 3466603-G-T **
23145383-C-A 20983497-C-A **
20447356-G-A 18285470-G-A P5_Dst **
56850415-TA-T **
3389387-T-A 3521346-T-A **
3397729-C-A 3529688-C-A **
3467197-C-A 3599156-C-A **
9056904-T-A **
8384747-G-T 8516706-G-T **
26098003-A-ATAG 23951856-A-ATAG P1_Y1 **
8669788-C-A 8801747-C-A **
8699775-T-C 8831734-T-C **
8790497-T-A 8922456-T-A **
8790498-C-G 8922457-C-G **
8849730-C-A 8981689-C-A **
9056878-T-G **
9056896-T-A **
9131307-T-A 9293698-T-A **
8238281-T-C 8370240-T-C **
9437358-C-A 9599749-C-A **
9442228-A-G 9604619-A-G **
9675342-T-C 9837733-T-C IR3_Prx **
26059256-A-G 23913109-A-G P1_Y1 **
25995575-G-A 23849428-G-A P1_Y1 **
25395896-T-A 23249749-T-A P2_r2 **
9962560-T-A 10124951-T-A **
9962564-G-T 10124955-G-T **
9979138-G-A 10141529-G-A **
8321672-C-A 8453631-C-A **
8159655-T-C 8291614-T-C **
9979142-T-A 10141533-T-A **
7294434-G-C 7426393-G-C **
26129753-T-TCG 23983606-T-TCG P1_Y1 **
7196481-C-A 7328440-C-A **
7225391-C-A 7357350-C-A **
7240809-A-T 7372768-A-T **
7240818-C-G 7372777-C-G **
7240819-A-C 7372778-A-C **
7240832-A-T 7372791-A-T **
7257795-A-C 7389754-A-C **
7258022-C-A 7389981-C-A **
7320416-C-G 7452375-C-G **
8052448-T-G 8184407-T-G **
7331226-G-C 7463185-G-C **
26129741-T-G 23983594-T-G P1_Y1 **
7420770-C-A 7552729-C-A **
7662711-C-A 7794670-C-A **
7705589-T-G 7837548-T-G **
7717889-G-T 7849848-G-T **
8052425-C-G 8184384-C-G **
8052429-G-A 8184388-G-A **
8052443-T-G 8184402-T-G **
9979140-T-G 10141531-T-G **
9979156-C-G 10141547-C-G **
3501005-C-A 3632964-C-A **
10823993-A-G **
10781561-C-A **
10789472-G-A **
10791055-G-T **
10796643-A-AATTGT **
10796661-C-CCGTA **
10798225-G-T **
10802400-C-T **
25395828-C-A 23249681-C-A P2_r2 **
10817418-C-T **
10823997-C-G **
10763216-C-A **
10824011-C-A **
10824016-C-G **
10837374-C-A **
10845619-A-T **
22696468-G-A 20534582-G-A **
10847527-C-A **
10867369-C-T **
10867856-A-T **
10869327-C-A **
10773038-A-T **
10755415-T-TGCCACA **
9979158-G-A 10141549-G-A **
10682671-C-T **
9979165-T-A 10141556-T-A **
9979205-C-A 10141596-C-A **
25395893-C-T 23249746-C-T P2_r2 **
10026770-G-T 10189161-G-T **
10050756-T-A 10213147-T-A **
10060918-C-A 10223309-C-A **
10625796-C-G **
10655853-T-C **
10673784-T-G **
10683625-C-A **
10755411-C-CGATT **
10691985-A-G **
10691991-G-A **
10692007-T-A **
10692009-T-G **
25395852-T-G 23249705-T-G P2_r2 **
25395843-C-A 23249696-C-A P2_r2 **
10748017-A-G **
10748021-C-CACTTGGGGTTG **
10748032-A-ATCTG **
10748043-T-G **
7186257-A-T 7318216-A-T **
7186238-A-G 7318197-A-G **
7186235-A-C 7318194-A-C **
5294001-T-G 5425960-T-G **
5186690-C-A 5318649-C-A **
5250436-G-T 5382395-G-T **
5250441-T-A 5382400-T-A **
5267076-C-A 5399035-C-A **
5283893-C-T 5415852-C-T **
5283914-A-T 5415873-A-T **
5293983-C-G 5425942-C-G **
5293985-C-G 5425944-C-G **
5293999-A-G 5425958-A-G **
5294513-G-A 5426472-G-A **
4968345-C-A 5100304-C-A **
5393277-A-G 5525236-A-G **
5412381-C-A 5544340-C-A **
5442135-C-A 5574094-C-A **
5442187-C-A 5574146-C-A **
5458603-T-A 5590562-T-A **
5524336-C-A 5656295-C-A **
5645254-G-A 5777213-G-A **
5697810-C-A 5829769-C-A **
5806364-A-C 5938323-A-C **
4999827-C-A 5131786-C-A **
4931066-T-A 5063025-T-A **
5926914-A-G 6058873-A-G **
4133351-G-A 4265310-G-A **
3651320-C-T 3783279-C-T **
3651331-T-A 3783290-T-A **
3695984-A-C 3827943-A-C **
3695986-C-T 3827945-C-T **
3696001-A-G 3827960-A-G **
3696010-T-A 3827969-T-A **
4002424-T-A 4134383-T-A **
4002426-G-A 4134385-G-A **
4049609-T-G 4181568-T-G **
4159867-A-G 4291826-A-G **
4920876-G-T 5052835-G-T **
4241292-C-G 4373251-C-G **
4282001-T-A 4413960-T-A **
4626362-C-A 4758321-C-A **
4703794-A-T 4835753-A-T **
4781107-T-C 4913066-T-C **
4863324-G-A 4995283-G-A **
4871799-T-G 5003758-T-G **
4888173-C-A 5020132-C-A **
4900928-G-T 5032887-G-T **
5907670-G-T 6039629-G-T **
5969717-T-C 6101676-T-C **
7185535-G-T 7317494-G-T **
7028863-C-A 7160822-C-A **
6881467-A-G 7013426-A-G **
6882581-T-C 7014540-T-C **
6934802-G-T 7066761-G-T **
6944942-T-A 7076901-T-A **
6944944-A-G 7076903-A-G **
6954790-C-T 7086749-C-T **
6954801-G-T 7086760-G-T **
7013597-C-A 7145556-C-A **
7028580-G-A 7160539-G-A **
7050147-A-G 7182106-A-G **
6776248-C-G 6908207-C-G **
7058276-T-C 7190235-T-C **
7127268-C-A 7259227-C-A **
7128256-G-T 7260215-G-T **
7131348-T-C 7263307-T-C **
7131364-T-A 7263323-T-A **
7131366-C-A 7263325-C-A **
7131373-T-A 7263332-T-A **
7140578-C-G 7272537-C-G **
7149471-A-G 7281430-A-G **
7159105-C-G 7291064-C-G **
6829551-A-G 6961510-A-G **
6770989-T-G 6902948-T-G **
5982476-G-T 6114435-G-T **
6646864-C-A 6778823-C-A **
6279322-T-G 6411281-T-G IR3_Dst **
6279326-T-G 6411285-T-G IR3_Dst **
6392545-G-T 6524504-G-T **
6444816-A-C 6576775-A-C **
6516678-A-C 6648637-A-C **
6516725-A-T 6648684-A-T **
6516731-G-T 6648690-G-T **
6516744-T-C 6648703-T-C **
6516746-A-C 6648705-A-C **
22564715-C-A 20402829-C-A **
6770988-C-G 6902947-C-G **
6732593-C-A 6864552-C-A **
6749001-G-T 6880960-G-T **
26129754-T-TG 23983607-T-TG P1_Y1 **
6762853-A-G 6894812-A-G **
6765913-C-A 6897872-C-A **
6767840-C-T 6899799-C-T **
6769874-C-A 6901833-C-A **
6770980-C-G 6902939-C-G **
6770982-C-A 6902941-C-A **
23009552-C-A 20847666-C-A ***
23274739-CTTTT-C,CTTT 21112853-CTTTT-C,CTTT 18×T***
22439962-C-G 20278076-C-G BY31883 DYZ19 ***
22489071-TA-T 20327185-TA-T DYZ19 ***
27791944-T-TCTTCTTCTTCTG 25645797-T-TCTTCTTCTTCTG P1_Y2 ***
19975699-G-C 17863819-G-C P5_Prx ***
20680973-G-C 18519087-G-C P4_Prx ***
22240195-C-T 20078309-C-T DYZ19 ***
22868285-T-A,TA 20706399-T-A,TA 27×A***
24202575-GT-G 22056428-GT-G P3_b1 ***
26060220-AT-A 23914073-AT-A P1_Y1 ***
10023813-C-A 10186204-C-A ***
13842206-G-C 11721500-G-C ***
10988779-C-A ***
3994846-A-G 4126805-A-G ***
10023775-C-A 10186166-C-A ***
13456627-C-T 11300951-C-T ***
21153396-T-C 18991510-T-C ***
7422126-C-A 7554085-C-A ***
13843762-ATGGAG-A 11723056-ATGGAG-A ***
13826121-C-A 11705415-C-A ***
11014374-TTCCAC-T ***
17503936-C-A 15392056-C-A ***
13734236-C-T 11578560-C-T ***
7269597-C-T 7401556-C-T ***
19048392-TAG-T 16936512-TAG-T 9×AG***
13450153-A-T 11294477-A-T ***
14747948-C-T 12636017-C-T ***
18573708-TTA-T 16461828-TTA-T ***
22300737-A-G 20138851-A-G DYZ19 ***
13826120-A-G 11705414-A-G ***
13857411-G-GAATGA 11736705-G-GAATGA ***
13696381-ATGGAATCCAT-A 11540705-ATGGAATCCAT-A ***
9845161-G-GA 10007552-G-GA 10×A***
15364059-CAAA-C 13252179-CAAA-C 21×A***
8703052-T-A 8835011-T-A ***
13458001-C-T 11302325-C-T ***
13664672-TGGAAC-T 11508996-TGGAAC-T ***
10873133-C-T ***
16282390-C-A 14170510-C-A ***
22170520-G-T 20008634-G-T ***
17821804-C-A 15709924-C-A ***
12865784-CTTTT-C,CTTT ***
15107523-G-T 12995610-G-T ***
15468716-G-T 13356836-G-T ***
16629371-G-A 14517491-G-A ***
17167948-G-A 15056068-G-A ***
17170167-CTTTT-C,CTT 15058287-CTTTT-C,CTT 21×T***
18060351-T-A 15948471-T-A ***
14023621-A-G 11902915-A-G ***
19547815-T-A 17435935-T-A 16×A***
21084375-G-GTA 18922489-G-GTA ***
21153418-C-G 18991532-C-G ***
21153421-T-A 18991535-T-A ***
21153425-G-A 18991539-G-A ***
21528325-G-T 19366439-G-T ***
14701015-C-A 12589081-C-A ***
13482594-C-A 11326918-C-A ***
17864994-C-A 15753114-C-A ***
8649790-A-G 8781749-A-G ***
16050909-CCTTTCTTT-C,CCTTT 13939029-CCTTTCTTT-C,CCTTT 11×CTTT***
17408355-C-A 15296475-C-A ***
3012825-A-G 3144784-A-G ***
6757079-C-A 6889038-C-A ***
7195307-CAA-C,CA 7327266-CAA-C,CA 16×A***
7387432-G-T 7519391-G-T ***
9771054-ATTT-A,AT 9933445-ATTT-A,AT 16×T***
13224432-C-A 11068756-C-A ***
9811082-G-T 9973473-G-T ***
9935290-C-A 10097681-C-A ***
10012940-CCT-C 10175331-CCT-C ***
10746942-C-T ***
10746958-C-T ***
10807082-G-C,T ***
10018686-A-G 10181077-A-G ***
16514-G-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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