Rauva
FTDNA: 408680, BigY2: 408680Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 408680 | BigY2 408680 |
---|---|---|---|---|---|---|---|---|---|
15555342-C-G | 13443462-C-G | Y68445 | Y | Y | + | + | |||
6177465-AT-A | 6309424-AT-A | IR3_Dst | 9×T | *** | * | ||||
11014466-C-G | * | ||||||||
17552175-C-A | 15440295-C-A | ** | |||||||
19377236-AAAAG-A | 17265356-AAAAG-A | 5×AAAG | ** | ||||||
23364108-G-A | 21202222-G-A | ** | |||||||
28605368-GAAT-G | 26459221-GAAT-G | ** | |||||||
17828086-G-GT | 15716206-G-GT | 12×T | ** | ||||||
9964210-A-T | 10126601-A-T | ** | |||||||
18050306-C-A | 15938426-C-A | ** | |||||||
58855340-T-C | 56735531-A-G | ** | |||||||
28781528-TA-T | 26635381-TA-T | 9×A | ** | ||||||
23050435-G-A | 20888549-G-A | ** | ** | ||||||
27499310-C-CA | 25353163-C-CA | P1_Y2 | 30×A | ** | |||||
10843724-T-TCTCCTCCACTC | ** | ||||||||
10935488-A-C | ** | ||||||||
21852356-C-A | 19690470-C-A | ** | |||||||
17074679-A-G | 14962799-A-G | ** | |||||||
13198113-C-A | 11042437-C-A | ** | |||||||
15700994-C-A | 13589114-C-A | ** | |||||||
10887928-T-C | ** | ||||||||
23034501-G-A | 20872615-G-A | ** | |||||||
26100553-A-T | 23954406-A-T | P1_Y1 | ** | ||||||
6874585-C-A | 7006544-C-A | ** | |||||||
14425625-C-A | 12304900-C-A | ** | |||||||
5335399-C-A | 5467358-C-A | ** | |||||||
23137501-C-A | 20975615-C-A | ** | |||||||
6642752-C-A | 6774711-C-A | ** | |||||||
28534554-C-CT | 26388407-C-CT | 9×T | ** | ||||||
10668935-T-A | ** | ||||||||
10757608-C-T | ** | ||||||||
4957033-C-A | 5088992-C-A | ** | |||||||
11030723-A-ATTCCATTCCT | ** | ||||||||
16702892-C-A | 14591012-C-A | ** | |||||||
21002539-C-CTT | 18840653-C-CTT | P4_Dst | ** | ||||||
17144012-C-G | 15032132-C-G | ** | |||||||
6816546-GAAAAA-G | 6948505-GAAAAA-G | 22×A | ** | ||||||
13860979-C-A | 11740273-C-A | ** | |||||||
10764879-G-T | ** | ||||||||
6096977-C-A | 6228936-C-A | ** | |||||||
21315050-C-A | 19153164-C-A | ** | |||||||
10797919-C-G | ** | ||||||||
10797976-A-T | ** | ||||||||
10797988-TCCACTCCATA-T | ** | ||||||||
28484943-C-A | 26338796-C-A | ** | |||||||
14230153-C-A | 12109447-C-A | ** | |||||||
10757210-A-G | ** | ||||||||
22211501-C-A | 20049615-C-A | ** | |||||||
4533712-C-A | 4665671-C-A | ** | |||||||
7318560-C-A | 7450519-C-A | ** | |||||||
14862939-ATT-A | 12751005-ATT-A | 12×T | ** | ||||||
18022348-C-A | 15910468-C-A | ** | |||||||
18361475-T-A | 16249595-T-A | P6_Prx | ** | ||||||
20050977-T-C | 17939097-T-C | P5_Prx | ** | ||||||
9952528-C-A | 10114919-C-A | ** | |||||||
15128140-A-T | 13016227-A-T | ** | |||||||
3544622-C-A | 3676581-C-A | ** | |||||||
21363037-C-A | 19201151-C-A | ** | |||||||
10969708-T-C | ** | ||||||||
16345033-C-A | 14233153-C-A | ** | |||||||
10805567-G-T | ** | ||||||||
26229944-T-TC | 24083797-T-TC | P1_Y1 | ** | ||||||
14181103-C-A | 12060397-C-A | ** | |||||||
5192970-G-T | 5324929-G-T | ** | |||||||
10919305-G-T | FT436535 | ** | |||||||
17143948-G-A | 15032068-G-A | ** | |||||||
17143970-G-A | 15032090-G-A | ** | |||||||
17144001-C-T | 15032121-C-T | ** | |||||||
17567527-C-A | 15455647-C-A | ** | |||||||
16045534-C-A | 13933654-C-A | ** | |||||||
17144011-C-T | 15032131-C-T | ** | |||||||
5409845-C-A | 5541804-C-A | ** | |||||||
16707593-G-T | 14595713-G-T | ** | |||||||
21315339-C-A | 19153453-C-A | ** | |||||||
6509935-C-A | 6641894-C-A | ** | |||||||
10988041-G-T | ** | ||||||||
19213555-C-A | 17101675-C-A | ** | |||||||
4542811-G-A | 4674770-G-A | ** | |||||||
27583246-G-T | 25437099-G-T | P1_Y2 | ** | ||||||
3284999-G-T | 3416958-G-T | ** | |||||||
11019324-C-A | ** | ||||||||
17306500-C-A | 15194620-C-A | ** | |||||||
7362127-C-A | 7494086-C-A | ** | |||||||
27583214-G-T | 25437067-G-T | P1_Y2 | 11×T | ** | |||||
7045715-C-A | 7177674-C-A | ** | |||||||
4460707-C-A | 4592666-C-A | ** | |||||||
10944327-C-A | ** | ||||||||
10783788-C-G | ** | ||||||||
56838123-G-T | ** | ||||||||
10996597-C-A | ** | ||||||||
17090820-C-A | 14978940-C-A | ** | |||||||
28480318-C-A | 26334171-C-A | ** | |||||||
17143977-C-T | 15032097-C-T | ** | |||||||
10683419-C-A | ** | ||||||||
9932737-C-A | 10095128-C-A | ** | |||||||
25990620-T-TTG | 23844473-T-TTG | P1_Y1 | ** | ||||||
10852669-G-T | ** | ||||||||
21457389-C-A | 19295503-C-A | ** | |||||||
2772886-C-A | 2904845-C-A | ** | |||||||
9077255-G-T | 9239646-G-T | ** | |||||||
13902127-C-A | 11781421-C-A | ** | |||||||
6699020-A-ATT | 6830979-A-ATT | 24×T | ** | ||||||
24070716-C-A | 21924569-C-A | P3_b1 | ** | ||||||
5211770-C-A | 5343729-C-A | ** | |||||||
10982333-C-A | ** | ||||||||
14472988-T-G | 12352257-T-G | ** | |||||||
13521451-C-A | 11365775-C-A | ** | |||||||
4567093-C-A | 4699052-C-A | ** | |||||||
19246674-C-A | 17134794-C-A | ** | |||||||
7013547-C-A | 7145506-C-A | ** | |||||||
5708483-C-A | 5840442-C-A | FT263448 | ** | ||||||
7141951-C-A | 7273910-C-A | ** | |||||||
14530535-C-A | 12418736-C-A | ** | |||||||
16071766-G-T | 13959886-G-T | ** | |||||||
3821688-C-A | 3953647-C-A | ** | |||||||
18625415-G-T | 16513535-G-T | ** | |||||||
10677051-T-C | ** | ||||||||
10677060-T-C | ** | ||||||||
10677067-CTCGG-C | ** | ||||||||
10677085-GT-A | ** | ||||||||
10677095-G-A | ** | ||||||||
10677109-CACAAA-C | ** | ||||||||
10677122-A-ATTTAT | ** | ||||||||
9499569-G-T | 9661960-G-T | ** | |||||||
15276579-C-A | 13164668-C-A | ** | |||||||
17770441-C-A | 15658561-C-A | ** | |||||||
13896974-C-A | 11776268-C-A | ** | |||||||
3275332-C-T | 3407291-C-T | ** | |||||||
22204475-G-T | 20042589-G-T | ** | |||||||
26045927-G-T | 23899780-G-T | P1_Y1 | ** | ||||||
10882024-C-A | ** | ||||||||
10882022-T-G | ** | ||||||||
24672685-G-T | 22526538-G-T | P3_b2 | ** | ||||||
26243447-AAG-A | 24097300-AAG-A | P1_Y1 | ** | ||||||
19304127-C-A | 17192247-C-A | ** | |||||||
9990191-C-A | 10152582-C-A | ** | |||||||
10995566-T-C | ** | ||||||||
10866008-A-G | ** | ||||||||
9941410-C-A | 10103801-C-A | ** | |||||||
24409327-G-T | 22263180-G-T | ** | |||||||
17014376-C-A | 14902496-C-A | ** | |||||||
10977071-T-TACACTCCACTGCACC | ** | ||||||||
15109667-C-A | 12997754-C-A | ** | |||||||
23395961-C-A | 21234075-C-A | ** | |||||||
10682667-G-T | ** | ||||||||
9117874-G-T | ** | ||||||||
19416847-C-A | 17304967-C-A | ** | |||||||
10761870-C-A | ** | ||||||||
16998993-C-A | 14887113-C-A | FT330200 | ** | ||||||
10761871-C-T | ** | ||||||||
13874916-C-A | 11754210-C-A | ** | |||||||
17224298-C-A | 15112418-C-A | ** | |||||||
3818028-C-A | 3949987-C-A | ** | |||||||
14239416-G-A | 12118710-G-A | ** | |||||||
8078656-A-G | 8210615-A-G | ** | |||||||
18186069-C-A | 16074189-C-A | ** | |||||||
2685634-C-A | 2817593-C-A | ** | |||||||
2759645-A-G | 2891604-A-G | ** | |||||||
2772993-C-A | 2904952-C-A | ** | |||||||
2976313-C-A | 3108272-C-A | ** | |||||||
3012907-A-G | 3144866-A-G | ** | |||||||
3022859-C-A | 3154818-C-A | ** | |||||||
3034047-C-A | 3166006-C-A | ** | |||||||
3195612-G-T | 3327571-G-T | ** | |||||||
3215453-G-T | 3347412-G-T | ** | |||||||
3222847-G-T | 3354806-G-T | ** | |||||||
3268261-G-A | 3400220-G-A | ** | |||||||
3269025-G-T | 3400984-G-T | ** | |||||||
3271404-A-G | 3403363-A-G | ** | |||||||
3293748-G-T | 3425707-G-T | ** | |||||||
3299043-G-T | 3431002-G-T | ** | |||||||
3331025-C-A | 3462984-C-A | ** | |||||||
3392074-A-G | 3524033-A-G | ** | |||||||
3560268-C-A | 3692227-C-A | ** | |||||||
3605797-C-A | 3737756-C-A | ** | |||||||
3612893-C-A | 3744852-C-A | ** | |||||||
3633655-C-A | 3765614-C-A | ** | |||||||
3633686-G-A | 3765645-G-A | ** | |||||||
3790670-C-A | 3922629-C-A | ** | |||||||
3846352-G-T | 3978311-G-T | ** | |||||||
3854114-T-C | 3986073-T-C | ** | |||||||
4000557-G-T | 4132516-G-T | ** | |||||||
4088678-C-T | 4220637-C-T | ** | |||||||
4095241-T-G | 4227200-T-G | ** | |||||||
4115914-A-C | 4247873-A-C | ** | |||||||
4154711-C-A | 4286670-C-A | ** | |||||||
4317828-C-A | 4449787-C-A | ** | |||||||
4443173-A-G | 4575132-A-G | ** | |||||||
4472432-T-G | 4604391-T-G | ** | |||||||
4563400-A-C | 4695359-A-C | ** | |||||||
4599847-G-T | 4731806-G-T | ** | |||||||
4665313-G-C | 4797272-G-C | ** | |||||||
4866295-C-A | 4998254-C-A | ** | |||||||
4898021-T-C | 5029980-T-C | ** | |||||||
4915246-A-G | 5047205-A-G | ** | |||||||
4957731-C-A | 5089690-C-A | ** | |||||||
4970298-G-T | 5102257-G-T | ** | |||||||
5073441-T-G | 5205400-T-G | ** | |||||||
5073446-T-A | 5205405-T-A | ** | |||||||
5081894-C-A | 5213853-C-A | ** | |||||||
5172337-C-A | 5304296-C-A | ** | |||||||
5192950-G-T | 5324909-G-T | ** | |||||||
5211873-C-A | 5343832-C-A | ** | |||||||
5213810-G-T | 5345769-G-T | ** | |||||||
5215738-T-A | 5347697-T-A | ** | |||||||
5246627-T-G | 5378586-T-G | ** | |||||||
5306394-C-A | 5438353-C-A | ** | |||||||
5318859-T-C | 5450818-T-C | ** | |||||||
5358107-C-A | 5490066-C-A | ** | |||||||
5358114-A-G | 5490073-A-G | ** | |||||||
5358504-A-G | 5490463-A-G | ** | |||||||
5392896-G-T | 5524855-G-T | ** | |||||||
5411900-T-A | 5543859-T-A | ** | |||||||
5446183-T-C | 5578142-T-C | ** | |||||||
5454591-C-A | 5586550-C-A | ** | |||||||
5455608-T-A | 5587567-T-A | ** | |||||||
5525435-G-T | 5657394-G-T | ** | |||||||
5565893-G-A | 5697852-G-A | ** | |||||||
5579757-G-T | 5711716-G-T | ** | |||||||
5711866-TA-T | 5843825-TA-T | ** | |||||||
5780236-G-T | 5912195-G-T | ** | |||||||
5803437-C-A | 5935396-C-A | ** | |||||||
5803544-G-A | 5935503-G-A | ** | |||||||
5841636-C-T | 5973595-C-T | ** | |||||||
5867489-C-A | 5999448-C-A | ** | |||||||
5867550-C-A | 5999509-C-A | ** | |||||||
5937481-C-G | 6069440-C-G | ** | |||||||
5937575-G-C | 6069534-G-C | ** | |||||||
5937590-G-A | 6069549-G-A | ** | |||||||
5937959-G-C | 6069918-G-C | ** | |||||||
6023457-T-C | 6155416-T-C | ** | |||||||
6024568-A-G | 6156527-A-G | FT166896 | ** | ||||||
6194358-T-A | 6326317-T-A | IR3_Dst | ** | ||||||
6461653-A-T | 6593612-A-T | ** | |||||||
6479365-C-A | 6611324-C-A | ** | |||||||
6688589-T-C | 6820548-T-C | ** | |||||||
6731095-C-A | 6863054-C-A | ** | |||||||
6731160-T-C | 6863119-T-C | FTB79531 | ** | ||||||
6916260-A-G | 7048219-A-G | ** | |||||||
7201300-A-T | 7333259-A-T | ** | |||||||
7248564-C-A | 7380523-C-A | ** | |||||||
7311917-C-A | 7443876-C-A | ** | |||||||
7345688-T-C | 7477647-T-C | ** | |||||||
7347248-T-G | 7479207-T-G | ** | |||||||
7347268-A-G | 7479227-A-G | ** | |||||||
7348647-C-A | 7480606-C-A | ** | |||||||
7754108-T-A | 7886067-T-A | ** | |||||||
7861667-CT-C | 7993626-CT-C | ** | |||||||
7897201-T-C | 8029160-T-C | ** | |||||||
8110705-C-T | 8242664-C-T | FT295187 | ** | ||||||
8281797-G-GA | 8413756-G-GA | ** | |||||||
8345737-G-A | 8477696-G-A | ** | |||||||
8712030-A-C | 8843989-A-C | ** | |||||||
8712156-A-T | 8844115-A-T | ** | |||||||
8855549-C-A | 8987508-C-A | Y4273 FGC12901 | ** | ||||||
8901070-CACACACATAT-C | 9033029-CACACACATAT-C | ** | |||||||
8911874-T-C | 9043833-T-C | ** | |||||||
9075213-T-G | 9237604-T-G | ** | |||||||
9442307-T-G | 9604698-T-G | ** | |||||||
9499015-C-A | 9661406-C-A | ** | |||||||
9666539-T-C | 9828930-T-C | IR3_Prx | ** | ||||||
9917251-T-A | 10079642-T-A | ** | |||||||
9939915-C-A | 10102306-C-A | ** | |||||||
9996187-A-C | 10158578-A-C | ** | |||||||
9996189-T-C | 10158580-T-C | ** | |||||||
9996190-C-G | 10158581-C-G | ** | |||||||
9996194-T-C | 10158585-T-C | ** | |||||||
10046207-A-C | 10208598-A-C | ** | |||||||
10060916-T-C | 10223307-T-C | ** | |||||||
10631432-C-A | ** | ||||||||
10646123-C-A | ** | ||||||||
10666599-A-G | FT48518 | ** | |||||||
10682962-T-G | ** | ||||||||
10688562-C-G | ** | ||||||||
10691495-C-A | ** | ||||||||
10751843-G-T | ** | ||||||||
10756279-C-A | ** | ||||||||
10759125-C-A | FT429959 | ** | |||||||
10761876-A-T | ** | ||||||||
10773302-A-T | ** | ||||||||
10776847-C-A | ** | ||||||||
10791923-T-G | ** | ||||||||
10791955-C-T | ** | ||||||||
10797626-C-A | ** | ||||||||
10807139-A-G | ** | ||||||||
10813649-C-CTGCA | ** | ||||||||
10813652-A-AT | ** | ||||||||
10822639-T-C | ** | ||||||||
10823483-C-A | ** | ||||||||
10825883-TTCCAC-T | ** | ||||||||
10845557-G-T | ** | ||||||||
10878921-C-A | ** | ||||||||
10882000-C-T | ** | ||||||||
10892629-T-G | ** | ||||||||
10895529-G-T | ** | ||||||||
10900634-A-C | ** | ||||||||
10902099-C-A | ** | ||||||||
10909889-T-C | ** | ||||||||
10912671-A-T | ** | ||||||||
10912672-A-G | ** | ||||||||
10912677-C-T | ** | ||||||||
10912678-C-T | ** | ||||||||
10914629-A-T | ** | ||||||||
10920955-C-A | ** | ||||||||
10926473-T-G | ** | ||||||||
10928044-G-C | FGC80008 | ** | |||||||
10940281-C-A | ** | ||||||||
10940964-G-GTCACT | ** | ||||||||
10940978-T-C | ** | ||||||||
10940993-C-G | ** | ||||||||
10940995-C-A | ** | ||||||||
10941459-C-A | ** | ||||||||
10951804-T-C | ** | ||||||||
10969635-C-A | ** | ||||||||
10974172-C-A | ** | ||||||||
10974685-T-G | ** | ||||||||
10986423-C-A | ** | ||||||||
10986626-C-A | ** | ||||||||
10997859-C-A | ** | ||||||||
11003896-T-A | ** | ||||||||
11006845-C-A | ** | ||||||||
11008815-C-A | ** | ||||||||
11015044-C-A | ** | ||||||||
11024670-C-A | ** | ||||||||
13213481-C-A | 11057805-C-A | ** | |||||||
13226880-T-A | 11071204-T-A | ** | |||||||
13236749-C-A | 11081073-C-A | ** | |||||||
13276344-C-A | 11120668-C-A | ** | |||||||
13285935-C-A | 11130259-C-A | ** | |||||||
13296914-T-C | 11141238-T-C | ** | |||||||
13296916-A-G | 11141240-A-G | ** | |||||||
13393272-C-A | 11237596-C-A | ** | |||||||
13409821-C-T | 11254145-C-T | ** | |||||||
13586034-C-A | 11430358-C-A | ** | |||||||
13612037-C-A | 11456361-C-A | ** | |||||||
13629228-C-G | 11473552-C-G | ** | |||||||
13708017-G-T | 11552341-G-T | ** | |||||||
11647959-T-A | ** | ||||||||
11663004-A-G | ** | ||||||||
11664120-C-A | ** | ||||||||
11669151-G-C | ** | ||||||||
11669161-A-C | ** | ||||||||
13804191-T-A | 11683485-T-A | ** | |||||||
13894354-C-A | 11773648-C-A | ** | |||||||
13908543-C-A | 11787837-C-A | ** | |||||||
13909980-C-A | 11789274-C-A | ** | |||||||
13941621-G-C | 11820915-G-C | ** | |||||||
13996470-C-A | 11875764-C-A | ** | |||||||
13999832-G-T | 11879126-G-T | ** | |||||||
14012145-C-A | 11891439-C-A | ** | |||||||
14065597-T-C | 11944891-T-C | ** | |||||||
14159836-C-A | 12039130-C-A | ** | |||||||
14180176-A-G | 12059470-A-G | ** | |||||||
14219531-T-A | 12098825-T-A | ** | |||||||
14278849-T-G | 12158143-T-G | ** | |||||||
14281058-G-C | 12160352-G-C | ** | |||||||
14283508-C-A | 12162802-C-A | ** | |||||||
14289570-G-T | 12168864-G-T | ** | |||||||
14300140-C-A | 12179434-C-A | ** | |||||||
14306349-A-G | 12185643-A-G | ** | |||||||
14371921-C-A | 12251217-C-A | ** | |||||||
14440467-G-T | 12319740-G-T | ** | |||||||
14472945-A-T | 12352214-A-T | ** | |||||||
14492694-C-A | 12380891-C-A | ** | |||||||
14524561-C-A | 12412762-C-A | ** | |||||||
14528456-C-A | 12416657-C-A | ** | |||||||
14539459-C-A | 12427660-C-A | ** | |||||||
14570077-A-G | 12458277-A-G | ** | |||||||
14721673-C-A | 12609741-C-A | ** | |||||||
14757896-C-A | 12645965-C-A | ** | |||||||
14803003-T-C | 12691074-T-C | ** | |||||||
14965172-G-C | 12853247-G-C | ** | |||||||
15106792-C-A | 12994879-C-A | ** | |||||||
15210883-G-A | 13098969-G-A | ** | |||||||
15221236-A-G | 13109322-A-G | ** | |||||||
15259216-T-C | 13147300-T-C | ** | |||||||
15533547-C-G | 13421667-C-G | ** | |||||||
15542048-C-G | 13430168-C-G | ** | |||||||
15542214-A-G | 13430334-A-G | ** | |||||||
15626647-TG-T | 13514767-TG-T | ** | |||||||
15626655-T-A | 13514775-T-A | ** | |||||||
15641705-T-A | 13529825-T-A | ** | |||||||
15745535-T-C | 13633655-T-C | ** | |||||||
15844786-T-G | 13732906-T-G | ** | |||||||
15893673-T-C | 13781793-T-C | ** | |||||||
15921924-G-A | 13810044-G-A | FT336468 | ** | ||||||
16003578-C-A | 13891698-C-A | ** | |||||||
16003690-C-T | 13891810-C-T | ** | |||||||
16003695-T-A | 13891815-T-A | ** | |||||||
16040919-C-A | 13929039-C-A | ** | |||||||
16071769-G-C | 13959889-G-C | ** | |||||||
16075182-CT-C | 13963302-CT-C | ** | |||||||
16181051-C-G | 14069171-C-G | ** | |||||||
16181070-A-T | 14069190-A-T | ** | |||||||
16345029-T-G | 14233149-T-G | ** | |||||||
16351861-G-T | 14239981-G-T | ** | |||||||
16354113-A-C | 14242233-A-C | ** | |||||||
16445676-C-A | 14333796-C-A | ** | |||||||
16445782-T-C | 14333902-T-C | ** | |||||||
16462732-A-G | 14350852-A-G | ** | |||||||
16515962-T-C | 14404082-T-C | ** | |||||||
16522785-T-A | 14410905-T-A | ** | |||||||
16531026-G-T | 14419146-G-T | ** | |||||||
16700346-C-A | 14588466-C-A | ** | |||||||
16729266-T-A | 14617386-T-A | ** | |||||||
16979601-G-T | 14867721-G-T | ** | |||||||
17029103-C-A | 14917223-C-A | ** | |||||||
17074669-TTTG-T | 14962789-TTTG-T | ** | |||||||
17095578-G-A | 14983698-G-A | ** | |||||||
17143941-C-T | 15032061-C-T | ** | |||||||
17143954-G-A | 15032074-G-A | ** | |||||||
17143966-T-C | 15032086-T-C | ** | |||||||
17143967-G-A | 15032087-G-A | ** | |||||||
17144005-T-C | 15032125-T-C | ** | |||||||
17297325-G-A | 15185445-G-A | ** | |||||||
17317595-C-A | 15205715-C-A | ** | |||||||
17367608-T-A | 15255728-T-A | ** | |||||||
17537926-T-C | 15426046-T-C | ** | |||||||
17622409-TC-T | 15510529-TC-T | ** | |||||||
17638409-T-C | 15526529-T-C | ** | |||||||
17717134-T-G | 15605254-T-G | ** | |||||||
17933885-C-A | 15822005-C-A | ** | |||||||
18042746-C-A | 15930866-C-A | ** | |||||||
18053547-A-T | 15941667-A-T | ** | |||||||
18101968-G-T | 15990088-G-T | ** | |||||||
18191724-A-G | 16079844-A-G | ** | |||||||
18618297-T-C | 16506417-T-C | ** | |||||||
18625396-T-C | 16513516-T-C | ** | |||||||
18627430-T-C | 16515550-T-C | ** | |||||||
18749625-T-C | 16637745-T-C | ** | |||||||
18789649-C-A | 16677769-C-A | ** | |||||||
18905289-T-A | 16793409-T-A | ** | |||||||
18987998-G-T | 16876118-G-T | ** | |||||||
18993329-G-T | 16881449-G-T | ** | |||||||
19014459-G-A | 16902579-G-A | ** | |||||||
19065263-T-A | 16953383-T-A | ** | |||||||
19097130-C-A | 16985250-C-A | ** | |||||||
19300409-A-T | 17188529-A-T | ** | |||||||
19318211-A-G | 17206331-A-G | ** | |||||||
19356230-C-A | 17244350-C-A | ** | |||||||
19418427-G-T | 17306547-G-T | ** | |||||||
19464885-C-A | 17353005-C-A | ** | |||||||
19809600-A-AG | 17697720-A-AG | P5_Prx | ** | ||||||
19853722-G-C | 17741842-G-C | P5_Prx | ** | ||||||
19992597-G-A | 17880717-G-A | P5_Prx | ** | ||||||
20420690-G-A | 18258804-G-A | P5_Dst | ** | ||||||
20631043-GC-G | 18469157-GC-G | P4_Prx | ** | ||||||
21109519-A-G | 18947633-A-G | ** | |||||||
21109581-C-A | 18947695-C-A | ** | |||||||
21141216-A-T | 18979330-A-T | ** | |||||||
21141229-C-A | 18979343-C-A | ** | |||||||
21162932-A-G | 19001046-A-G | ** | |||||||
21246199-C-T | 19084313-C-T | ** | |||||||
21283221-C-G | 19121335-C-G | ** | |||||||
21544758-T-G | 19382872-T-G | ** | |||||||
21586287-G-T | 19424401-G-T | ** | |||||||
21827917-C-A | 19666031-C-A | ** | |||||||
21832644-G-T | 19670758-G-T | ** | |||||||
22001462-C-A | 19839576-C-A | ** | |||||||
22013144-A-G | 19851258-A-G | ** | |||||||
22060371-C-T | 19898485-C-T | ** | |||||||
22464699-A-T | 20302813-A-T | BY221383 | DYZ19 | ** | |||||
22640512-A-G | 20478626-A-G | ** | |||||||
22662362-C-A | 20500476-C-A | FT250148 | ** | ||||||
22714867-G-T | 20552981-G-T | ** | |||||||
22768128-C-A | 20606242-C-A | ** | |||||||
23206558-A-G | 21044672-A-G | ** | |||||||
23289075-T-C | 21127189-T-C | ** | |||||||
23289103-G-C | 21127217-G-C | ** | |||||||
23364127-G-A | 21202241-G-A | FT88153 | ** | ||||||
23442744-C-T | 21280858-C-T | ** | |||||||
23464710-A-C | 21302824-A-C | ** | |||||||
23777751-A-T | 21615865-A-T | ** | |||||||
24127478-T-C | 21981331-T-C | P3_b1 | ** | ||||||
24148956-G-C | 22002809-G-C | P3_b1 | ** | ||||||
24296200-T-C | 22150053-T-C | P3_t1 | ** | ||||||
24409258-C-A | 22263111-C-A | ** | |||||||
24512842-G-T | 22366695-G-T | ** | |||||||
25954344-T-C | 23808197-T-C | P1_Y1 | ** | ||||||
25954413-CT-C | 23808266-CT-C | P1_Y1 | ** | ||||||
25954454-T-C | 23808307-T-C | P1_Y1 | ** | ||||||
25954474-T-C | 23808327-T-C | P1_Y1 | ** | ||||||
27232180-T-C | 25086033-T-C | P1_g3 | ** | ||||||
27595902-C-A | 25449755-C-A | P1_Y2 | ** | ||||||
27595976-C-A | 25449829-C-A | P1_Y2 | ** | ||||||
27952102-TATATA-T | 25805955-TATATA-T | P1_Y2 | ** | ||||||
28468399-C-A | 26322252-C-A | ** | |||||||
28471000-C-A | 26324853-C-A | ** | |||||||
28483524-C-A | 26337377-C-A | FT51710 | ** | ||||||
28484538-C-A | 26338391-C-A | ** | |||||||
28510102-C-A | 26363955-C-A | ** | |||||||
28518904-C-A | 26372757-C-A | ** | |||||||
28560041-A-G | 26413894-A-G | ** | |||||||
28607709-T-G | 26461562-T-G | ** | |||||||
28613375-C-A | 26467228-C-A | ** | |||||||
28704237-C-T | 26558090-C-T | ** | |||||||
28732080-G-A | 26585933-G-A | ** | |||||||
28738894-G-T | 26592747-G-T | ** | |||||||
28757025-T-C | 26610878-T-C | ** | |||||||
28761777-G-T | 26615630-G-T | ** | |||||||
56735531-A-ATTCAG | ** | ||||||||
56735540-A-C | ** | ||||||||
56735544-G-A | ** | ||||||||
56735562-T-A | ** | ||||||||
56735572-T-TGGATC | ** | ||||||||
56824655-G-C | ** | ||||||||
56845920-C-A | ** | ||||||||
56849028-CT-C | ** | ||||||||
56860174-TA-T | ** | ||||||||
7051-T-A | ** | ||||||||
27492-G-T | ** | ||||||||
28650882-C-A | 26504735-C-A | *** | |||||||
13720564-T-C | 11564888-T-C | *** | |||||||
22456580-C-A | 20294694-C-A | DYZ19 | *** | ||||||
22456603-T-A | 20294717-T-A | DYZ19 | *** | ||||||
10012816-C-T | 10175207-C-T | *** | |||||||
58981722-T-A | 56835575-T-A | *** | |||||||
58985830-A-G | 56839683-A-G | *** | |||||||
13845459-GAAA-G | 11724753-GAAA-G | 9×A | *** | ||||||
13465193-G-A | 11309517-G-A | *** | |||||||
24317021-A-G | 22170874-A-G | P3_t1 | *** | ||||||
58981691-T-C | 56835544-T-C | *** | |||||||
13838447-G-A | 11717741-G-A | *** | |||||||
10797912-T-G | *** | ||||||||
7166837-C-A | 7298796-C-A | *** | |||||||
10982300-C-T | *** | ||||||||
19071531-C-A | 16959651-C-A | *** | |||||||
7649100-C-A | 7781059-C-A | *** | |||||||
3272794-C-A | 3404753-C-A | *** | |||||||
56839654-G-T | *** | ||||||||
10850274-G-T | *** | ||||||||
27216723-C-A | 25070576-C-A | P1_g3 | *** | ||||||
15070614-CAAAAAAAA-C | 12958705-CAAAAAAAA-C | 20×A | *** | ||||||
2888231-ATT-A | 3020190-ATT-A | 12×T | *** | ||||||
3015704-G-T | 3147663-G-T | *** | |||||||
3395505-G-T | 3527464-G-T | *** | |||||||
3790878-GTATATATATA-G,GTA | 3922837-GTATATATATA-G,GTA | 21×TA | *** | ||||||
3790976-C-A | 3922935-C-A | *** | |||||||
7019081-G-T | 7151040-G-T | *** | |||||||
8568465-GTTTTT-G,GTTT | 8700424-GTTTTT-G,GTTT | 22×T | *** | ||||||
9220262-C-A | 9382653-C-A | *** | |||||||
9462035-C-A | 9624426-C-A | *** | |||||||
9979130-A-T | 10141521-A-T | *** | |||||||
10686196-C-A | *** | ||||||||
10841988-C-T | *** | ||||||||
10938681-C-A | *** | ||||||||
11022102-ATTCCA-A,ATTCCC | *** | ||||||||
13643345-C-A | 11487669-C-A | *** | |||||||
14429387-AT-A | 12308662-AT-A | *** | |||||||
14458197-G-T | 12337470-G-T | *** | |||||||
14502064-C-A | 12390269-C-A | *** | |||||||
15758666-G-T | 13646786-G-T | *** | |||||||
15928371-CTTTTTT-C | 13816491-CTTTTTT-C | 26×T | *** | ||||||
21858280-AG-A | 19696394-AG-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.