Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > M222 > DF106 > DF104 > DF105 > DF85 > S673 > S668 > DF97 > ZZ36 > BY3343 > A4697

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
35V8X
13227442-A-G 11071766-A-G +
14292155-C-T 12171449-C-T Y+
4533573-T-C 4665532-T-C *
14967081-G-A 12855156-G-A YY*
2925874-A-G 3057833-A-G *
3048369-T-G 3180328-T-G *
22972979-C-G 20811093-C-G YY*
16088660-A-G 13976780-A-G Y*
22824792-C-T 20662906-C-T YY*
28166978-T-G 26020831-T-G P1_b4 *
19455544-A-G 17343664-A-G **
16717687-A-T 14605807-A-T **
4074955-G-C 4206914-G-C **
19386785-TA-T 17274905-TA-T **
7194686-C-A 7326645-C-A **
16863876-A-C 14751996-A-C **
6649700-T-C 6781659-T-C **
16446113-A-C 14334233-A-C **
13908941-G-A 11788235-G-A **
4983042-A-C 5115001-A-C **
13240412-C-T 11084736-C-T **
13908917-A-AC 11788211-A-AC **
7537182-T-G 7669141-T-G **
13398511-C-T 11242835-C-T **
13398457-A-C 11242781-A-C **
7572547-A-T 7704506-A-T **
28673232-A-G 26527085-A-G **
13273371-CT-C 11117695-CT-C 10×T**
28761723-T-G 26615576-T-G **
8109546-A-G 8241505-A-G **
13504682-A-C 11349006-A-C **
8533388-C-G 8665347-C-G **
8809553-G-A 8941512-G-A **
6641417-C-T 6773376-C-T **
13281800-C-T 11126124-C-T **
6598413-T-C 6730372-T-C **
18142006-T-C 16030126-T-C **
23972565-A-G 21826418-A-G **
19110864-T-G 16998984-T-G **
5350478-G-T 5482437-G-T **
19143124-A-G 17031244-A-G **
18631061-G-T 16519181-G-T **
19154175-T-C 17042295-T-C **
23560574-C-T 21398688-C-T **
5511066-C-T 5643025-C-T **
18390052-A-C 16278172-A-C P6_Gap **
5536017-A-G 5667976-A-G **
18172283-T-A 16060403-T-A **
5599208-T-C 5731167-T-C **
5793663-T-C 5925622-T-C **
18125399-T-C 16013519-T-C **
22120446-C-T 19958560-C-T **
13319444-A-G 11163768-A-G **
23542301-C-T 21380415-C-T **
13277303-G-A 11121627-G-A **
13326824-A-G 11171148-A-G **
23427365-T-C 21265479-T-C **
22989273-T-C 20827387-T-C **
17075036-A-G 14963156-A-G **
22931473-T-C 20769587-T-C **
17019057-A-G 14907177-A-G **
13325449-C-T 11169773-C-T **
16927640-C-A 14815760-C-A **
13839811-G-A 11719105-G-A **
16915226-T-C 14803346-T-C **
13239356-T-A 11083680-T-A **
4102972-T-C 4234931-T-C **
22039091-A-G 19877205-A-G **
13241544-T-G 11085868-T-G **
13280230-T-G 11124554-T-G **
10022401-C-A 10184792-C-A **
3175024-A-G 3306983-A-G **
14233850-A-G 12113144-A-G **
14180404-T-C 12059698-T-C **
13273005-G-A 11117329-G-A **
13375517-CAT-C 11219841-CAT-C **
14167072-A-G 12046366-A-G **
14134930-T-C 12014224-T-C **
13241173-G-C 11085497-G-C **
13241184-T-C 11085508-T-C **
13398413-T-A 11242737-T-A **
13277499-G-A 11121823-G-A **
3239947-T-C 3371906-T-C **
14505935-A-G 12394140-A-G **
13241502-T-A 11085826-T-A **
4450990-A-T 4582949-A-T **
21071785-T-C 18909899-T-C **
3551665-C-G 3683624-C-G **
13319424-C-T 11163748-C-T **
13321953-G-A 11166277-G-A **
3551700-G-C 3683659-G-C **
21054937-ATATAT-A 18893051-ATATAT-A **
13345159-T-A 11189483-T-A **
3585175-G-A 3717134-G-A **
4106218-C-T 4238177-C-T **
3899948-T-C 4031907-T-C **
3920353-T-G 4052312-T-G **
21236240-C-T 19074354-C-T **
13280369-TTA-T 11124693-TTA-T **
13242241-CTTTTTTT-C 11086565-CTTTTTTT-C 21×T**
15525607-G-C 13413727-G-C **
15908668-T-C 13796788-T-C **
13932140-CAT-C 11811434-CAT-C 13×AT**
15903316-G-A 13791436-G-A **
15840636-A-G 13728756-A-G **
9432533-T-C 9594924-T-C **
13273993-C-A 11118317-C-A **
9465581-T-C 9627972-T-C **
13273994-C-T 11118318-C-T **
2690837-C-A 2822796-C-A **
3969793-T-TA 4101752-T-TA 10×A**
13323494-CAAAAAAAAAA-C 11167818-CAAAAAAAAAA-C 24×A**
14685724-C-T 12573790-C-T **
21988352-A-G 19826466-A-G **
24458742-C-A 22312595-C-A **
14766822-C-A 12654891-C-A **
13271050-G-GAA 11115374-G-GAA **
21709079-T-C 19547193-T-C **
2856738-G-T 2988697-G-T **
2888944-G-T 3020903-G-T **
15110768-G-A 12998855-G-A **
21753002-A-G 19591116-A-G **
13350677-C-T 11195001-C-T **
13283696-C-T 11128020-C-T **
19187445-A-T 17075565-A-T ***
19539770-T-G 17427890-T-G ***
18806077-G-T 16694197-G-T ***
19515816-G-C 17403936-G-C ***
20392044-G-A 18230158-G-A P5_Dst ***
19847625-C-A 17735745-C-A P5_Prx ***
19518409-T-C 17406529-T-C ***
19515802-C-G 17403922-C-G ***
19847619-C-A 17735739-C-A P5_Prx ***
19453889-T-C 17342009-T-C ***
19515794-A-G 17403914-A-G ***
19346482-C-T 17234602-C-T ***
19515784-C-T 17403904-C-T ***
23471038-C-A 21309152-C-A 19×A***
18806064-G-T 16694184-G-T ***
14101678-T-C 11980972-T-C ***
15647078-A-G 13535198-A-G ***
15474845-C-A 13362965-C-A ***
15434609-C-A 13322729-C-A ***
15391678-A-C 13279798-A-C ***
15323633-C-T 13211751-C-T ***
15047435-T-C 12935526-T-C ***
14693680-G-A 12581746-G-A ***
14620374-T-C 12508572-T-C ***
14443637-G-A 12322910-G-A ***
14271141-T-C 12150435-T-C ***
14030679-G-A 11909973-G-A ***
16000952-G-A 13889072-G-A ***
14005419-C-G 11884713-C-G ***
13851982-G-T 11731276-G-T ***
13840318-T-G 11719612-T-G ***
13726647-A-T 11570971-A-T ***
13726626-T-G 11570950-T-G ***
13724140-A-C 11568464-A-C ***
13691189-G-A 11535513-G-A ***
13680026-G-A 11524350-G-A ***
13680006-G-A 11524330-G-A ***
13607482-C-G 11451806-C-G ***
15696669-G-C 13584789-G-C ***
16000966-T-C 13889086-T-C ***
18800768-G-A 16688888-G-A ***
17322990-G-T 15211110-G-T ***
18693048-G-T 16581168-G-T ***
18635240-C-A 16523360-C-A ***
18462897-A-C 16351017-A-C P6_Dst ***
18443003-C-T 16331123-C-T P6_Dst ***
17994787-G-C 15882907-G-C P7_Prx ***
17978741-C-A 15866861-C-A ***
17805763-T-G 15693883-T-G ***
17755346-C-A 15643466-C-A ***
17658247-C-G 15546367-C-G ***
17413886-G-A 15302006-G-A ***
17074941-C-T 14963061-C-T ***
16000975-A-G 13889095-A-G ***
17057076-T-C 14945196-T-C ***
16930205-A-C 14818325-A-C ***
16876427-A-T 14764547-A-T ***
16598968-C-A 14487088-C-A ***
16598963-C-A 14487083-C-A ***
16344569-C-T 14232689-C-T ***
16344563-C-T 14232683-C-T ***
16132948-C-T 14021068-C-T ***
16001088-A-G 13889208-A-G ***
16001068-A-G 13889188-A-G ***
16000984-A-T 13889104-A-T ***
16654866-T-G 14542986-T-G ***
22271223-C-G 20109337-C-G DYZ19 ***
20533367-C-A 18371481-C-A P5_Dst ***
6402126-TG-CT 6534085-TG-CT ***
10036105-TAT-CAC 10198496-TAT-CAC ***
10028213-T-CTGGC 10190604-T-CTGGC ***
10025577-AAGG-GAGA 10187968-AAGG-GAGA ***
7405010-ATGAT-A 7536969-ATGAT-A ***
6089764-GT-G 6221723-GT-G 31×T***
4650472-GATATATATATATATATAT-G 4782431-GATATATATATATATATAT-G 24×AT***
3809136-A-AT 3941095-A-AT 31×T***
3411690-C-CA 3543649-C-CA 30×A***
13292089-CCCC-T 11136413-CCCC-T ***
23293637-TATGA-T 21131751-TATGA-T ***
10028264-ATGTTTTTGAA-CTCTTTCGGAG 10190655-ATGTTTTTGAA-CTCTTTCGGAG ***
13253199-G-GT 11097523-G-GT 14×T***
21202094-C-CT 19040208-C-CT 15×T***
13273993-CC-AT 11118317-CC-AT ***
10037935-TGA-CGG 10200326-TGA-CGG ***
58913479-T-G 56677392-A-C ***
58885658-A-T 56705213-T-A ***
58879024-C-G 56711847-G-C ***
58875598-T-C 56715273-A-G ***
58859200-T-A 56731671-A-T ***
58846704-C-A 56744167-G-T ***
58829559-G-A 56761312-C-T ***
58824831-G-T 56766040-C-A ***
58821938-G-C 56768933-C-G ***
28691756-T-G 26545609-T-G ***
28639082-C-A 26492935-C-A ***
28632075-A-C 26485928-A-C ***
28315811-T-G 26169664-T-G P1_b4 ***
10037927-TTA-ATC 10200318-TTA-ATC ***
10037991-ACT-GCCG 10200382-ACT-GCCG ***
28022308-T-C 25876161-T-C P1_Y2 ***
13725749-TT-AC 11570073-TT-AC ***
28787292-TGC-AGG 26641145-TGC-AGG ***
28786378-CGG-TGA 26640231-CGG-TGA 5×GGAAT***
28786349-GGAG-AGAA 26640202-GGAG-AGAA ***
22509795-ATTAC-CTTAA 20347909-ATTAC-CTTAA DYZ19 ***
22446152-ACA-TCT 20284266-ACA-TCT DYZ19 ***
22366398-TG-AT 20204512-TG-AT DYZ19 ***
22019738-CA-TG 19857852-CA-TG ***
20804885-GTATATA-G 18642999-GTATATA-G P4_Gap 15×TA***
19515710-TGGG-CGGT 17403830-TGGG-CGGT ***
19514909-TTTAT-CTTAA 17403029-TTTAT-CTTAA ***
16001075-TGAA-CGAG 13889195-TGAA-CGAG ***
16000943-TGCAG-CACAA 13889063-TGCAG-CACAA ***
14493174-CCG-C 12381371-CCG-C ***
13719743-G-GTAGTT 11564067-G-GTAGTT ***
13196089-GTTA-ATTC 11040413-GTTA-ATTC ***
13719742-T-TGTAGA 11564066-T-TGTAGA ***
13699029-ATGGAG-A 11543353-ATGGAG-A ***
13694374-TTT-CTC 11538698-TTT-CTC ***
13680000-CT-TC 11524324-CT-TC ***
13679984-GTGTT-TTGTA 11524308-GTGTT-TTGTA ***
13679959-ATCA-TTCG 11524283-ATCA-TTCG ***
13351186-CAA-C 11195510-CAA-C 20×A***
13338436-GGT-TTG 11182760-GGT-TTG ***
13323318-TTAC-CTAT 11167642-TTAC-CTAT ***
13313174-ACCT-GCCC 11157498-ACCT-GCCC ***
13312442-CCTTT-ACTTC 11156766-CCTTT-ACTTC ***
13257289-ATTTTT-A 11101613-ATTTTT-A 18×T***
13257285-ATATATTTTT-A 11101609-ATATATTTTT-A ***
13257283-ATATATATTT-A 11101607-ATATATATTT-A ***
28146910-A-G 26000763-A-G P1_b4 ***
27842050-A-G 25695903-A-G P1_Y2 ***
20569613-T-C 18407727-T-C P5_Dst ***
22434020-G-T 20272134-G-T DYZ19 ***
24604228-C-T 22458081-C-T P3_t2 ***
24575283-G-C 22429136-G-C P3_t2 ***
24501343-A-G 22355196-A-G ***
24470998-C-G 22324851-C-G ***
24470993-G-A 22324846-G-A ***
24342603-T-C 22196456-T-C P3_t1 ***
24142446-G-C 21996299-G-C P3_b1 ***
23897290-C-A 21735404-C-A ***
23824707-G-T 21662821-G-T ***
23673938-A-G 21512052-A-G ***
23304769-A-C 21142883-A-C ***
22951146-G-T 20789260-G-T ***
22849569-C-A 20687683-C-A ***
22366398-T-A 20204512-T-A DYZ19 ***
24696260-G-T 22550113-G-T P3_b2 ***
22322780-A-C 20160894-A-C DYZ19 ***
22283386-A-T 20121500-A-T DYZ19 ***
22251135-G-A 20089249-G-A DYZ19 ***
22251108-G-C 20089222-G-C DYZ19 ***
22072493-T-C 19910607-T-C ***
21530082-C-G 19368196-C-G ***
21366892-G-A 19205006-G-A ***
21165935-T-G 19004049-T-G ***
20962418-C-A 18800532-C-A P4_Dst ***
20801450-C-A 18639564-C-A P4_Prx ***
20697134-G-C 18535248-G-C P4_Prx ***
20685243-C-A 18523357-C-A P4_Prx ***
20570104-A-C 18408218-A-C P5_Dst ***
24663058-T-C 22516911-T-C P3_b2 ***
24912112-C-T 22765965-C-T g1 ***
27715216-T-G 25569069-T-G P1_Y2 ***
26249713-C-T 24103566-C-T P1_Y1 ***
27714388-A-G 25568241-A-G P1_Y2 ***
27693226-A-C 25547079-A-C P1_Y2 ***
27693184-T-G 25547037-T-G P1_Y2 ***
27636205-C-T 25490058-C-T P1_Y2 ***
27001276-T-C 24855129-T-C P1_r4 ***
26956551-A-G 24810404-A-G P1_r3 ***
26922147-G-A 24776000-G-A P1_r3 ***
26538093-T-C 24391946-T-C P1_g2 ***
26529553-G-T 24383406-G-T P1_g2 ***
26529520-G-T 24383373-G-T P1_g2 ***
26416327-T-G 24270180-T-G P1_Y1 ***
26335295-T-C 24189148-T-C P1_Y1 ***
26335271-G-C 24189124-G-C P1_Y1 ***
26242714-A-C 24096567-A-C P1_Y1 ***
25026710-C-G 22880563-C-G g1 ***
26215207-G-T 24069060-G-T P1_Y1 ***
26178308-T-C 24032161-T-C P1_Y1 ***
26056358-G-C 23910211-G-C P1_Y1 ***
25709368-G-T 23563221-G-T P1_b3 ***
25546224-C-A 23400077-C-A P1_gr1 ***
25456464-C-A 23310317-C-A P2_r2 ***
25376621-T-G 23230474-T-G P2_r2 ***
25312560-C-A 23166413-C-A P2_r1 ***
25312536-C-A 23166389-C-A P2_r1 ***
25215989-T-G 23069842-T-G P2_r1 ***
25160694-G-T 23014547-G-T g1 ***
25106605-A-G 22960458-A-G g1 ***
25087870-A-G 22941723-A-G g1 ***
25037610-A-G 22891463-A-G g1 ***
13547351-T-C 11391675-T-C ***
9880192-G-T 10042583-G-T 8×T***
13483020-T-G 11327344-T-G ***
58975536-GCATTCCATTCGATTC-G 56829389-GCATTCCATTCGATTC-G ***
13724198-G-C 11568522-G-C ***
22251147-C-T 20089261-C-T DYZ19 ***
7518493-CA-C 7650452-CA-C 19×A***
28225582-G-T 26079435-G-T P1_b4 14×T***
16598981-C-A 14487101-C-A ***
17323414-A-G 15211534-A-G ***
13278150-C-T 11122474-C-T ***
13254978-C-T 11099302-C-T ***
13241673-G-A 11085997-G-A ***
9964353-A-C 10126744-A-C ***
4764839-GTA-G 4896798-GTA-G ***
13446527-CTCCAT-C 11290851-CTCCAT-C 16×TCCAT***
59027058-A-G 56880911-A-G ***
5130494-G-T 5262453-G-T ***
59027040-A-C 56880893-A-C ***
21940420-C-A 19778534-C-A ***
21446213-A-C 19284327-A-C ***
21153846-A-T 18991960-A-T S4585 S4636 ***
14445989-C-T 12325262-C-T CTS2724 ***
13506864-T-A 11351188-T-A ***
13319162-T-C 11163486-T-C ***
13315264-A-G 11159588-A-G ***
13284047-T-G 11128371-T-G ***
13273818-A-G 11118142-A-G ***
13273402-A-G 11117726-A-G ***
13257156-G-A 11101480-G-A ***
13256154-T-C 11100478-T-C ***
5241078-A-C 5373037-A-C ***
58846314-G-C 56744557-C-G ***
13245387-C-A 11089711-C-A ***
58912893-T-G 56677978-A-C ***
10022394-T-C 10184785-T-C ***
10028234-T-G 10190625-T-G ***
10025586-T-C 10187977-T-C ***
10025097-T-C 10187488-T-C ***
10025098-C-G 10187489-C-G ***
10025629-T-C 10188020-T-C ***
28802622-CGGA-TGGC 26656475-CGGA-TGGC ***
10037877-G-GC 10200268-G-GC ***
10037922-A-G 10200313-A-G ***
10025139-A-C 10187530-A-C ***
14420806-G-T 12300081-G-T ***
22366399-G-T 20204513-G-T DYZ19 ***
22503064-C-G 20341178-C-G DYZ19 ***
13255179-A-G 11099503-A-G ***
28784660-G-A 26638513-G-A ***
6092947-GCTTTTTT-G 6224906-GCTTTTTT-G ***
13688222-GCATGGAATGGAATGC-G 11532546-GCATGGAATGGAATGC-G ***
22503032-G-T 20341146-G-T DYZ19 ***
22264973-T-C 20103087-T-C DYZ19 ***
22503036-C-T 20341150-C-T DYZ19 ***
58844301-T-C 56746570-A-G ***
13353860-G-C 11198184-G-C FGC49070 ***
13256044-GTT-G 11100368-GTT-G 12×T***
10038028-ACA-GCG 10200419-ACA-GCG ***
17265029-A-C 15153149-A-C ***
10037547-A-G 10199938-A-G ***
13323488-C-G 11167812-C-G ***
13222373-G-C 11066697-G-C ***
13255013-G-C 11099337-G-C ***
13241934-A-G 11086258-A-G ***
22698943-G-T 20537057-G-T ***
58855014-C-T 56735857-G-A ***
10032021-T-C 10194412-T-C YSC0000100 ***
13725750-T-C 11570074-T-C ***
13251349-T-G 11095673-T-G ***
5814483-G-A 5946442-G-A ***
28802677-T-C 26656530-T-C ***
28802651-G-T 26656504-G-T ***
19528524-CA-C 17416644-CA-C 18×A***
28786357-T-G 26640210-T-G ***
28786336-A-T 26640189-A-T ***
7417603-G-T 7549562-G-T ***
13241584-T-C 11085908-T-C ***
58855027-C-A 56735844-G-T ***
13256068-G-T 11100392-G-T ***
10026810-T-A 10189201-T-A ***
17109091-AACACAC-A 14997211-AACACAC-A 25×AC***
58885556-G-C 56705315-C-G ***
13716314-A-T 11560638-A-T A3832 ***
5949106-G-C 6081065-G-C ***
58990316-AGC-CGT 56844169-AGC-CGT ***
9191038-A-G 9353429-A-G ***
14989246-G-A 12877331-G-A ***
13273545-C-T 11117869-C-T ***
19293800-G-A 17181920-G-A ***
13661280-C-G 11505604-C-G ***
27810273-AAAGG-A 25664126-AAAGG-A P1_Y2 16×AAGG***
13453199-G-C 11297523-G-C ***
10036156-G-C 10198547-G-C ***
10026812-T-C 10189203-T-C ***
10026800-C-T 10189191-C-T ***
13241388-C-T 11085712-C-T ***
13323493-ACAAAAAAAAAA-CC 11167817-ACAAAAAAAAAA-CC ***
13241331-G-T 11085655-G-T ***
13240296-C-T 11084620-C-T ***
13223062-T-G 11067386-T-G ***
9974102-T-A 10136493-T-A ***
5995474-T-A 6127433-T-A ***
5814488-G-A 5946447-G-A 18×A***
4346539-A-C 4478498-A-C FGC24477 ***
4269138-G-T 4401097-G-T ***
2967294-C-A 3099253-C-A ***
59024400-G-GCA 56878253-G-GCA 9×CA***
14443816-T-A 12323089-T-A CTS2721 ***
14443806-G-A 12323079-G-A CTS2720 ***
14443801-T-A 12323074-T-A CTS2719 ***
13292082-TCCC-T 11136406-TCCC-T 10×C***
13285136-T-C 11129460-T-C ***
10020698-GTC-TTG 10183089-GTC-TTG ***
58889081-G-C 56701790-C-G ***
18976645-A-G 16864765-A-G ***
13746639-G-T 11590963-G-T ***
13289791-G-A 11134115-G-A 8×A***
10026775-T-C 10189166-T-C ***
10026618-G-T 10189009-G-T A3311 ***
10036512-G-A 10198903-G-A ***
13273844-G-C 11118168-G-C ***
10026763-A-G 10189154-A-G ***
10026764-A-T 10189155-A-T ***
10026797-C-A 10189188-C-A ***
13289774-A-G 11134098-A-G ***
10028243-T-G 10190634-T-G ***
22502986-A-T 20341100-A-T DYZ19 ***
13455850-A-T 11300174-A-T ***
7572514-A-G 7704473-A-G ***
9538588-A-G 9700979-A-G IR3_Prx ***
9383185-C-A 9545576-C-A ***
9371450-G-A 9533841-G-A ***
9186854-G-C 9349245-G-C ***
9076312-T-C 9238703-T-C ***
9062082-G-T 9224473-G-T ***
8835280-C-T 8967239-C-T ***
8835276-C-T 8967235-C-T ***
8578525-T-G 8710484-T-G ***
8329258-C-A 8461217-C-A ***
8019947-C-G 8151906-C-G ***
7633256-A-C 7765215-A-C ***
7485316-C-T 7617275-C-T IR1_L ***
9627208-C-T 9789599-C-T IR3_Prx ***
7418073-C-A 7550032-C-A 22×A***
7417608-C-T 7549567-C-T ***
7417581-G-T 7549540-G-T ***
7269640-G-T 7401599-G-T ***
7215718-A-C 7347677-A-C ***
7025397-C-A 7157356-C-A ***
6573590-A-C 6705549-A-C ***
6529382-T-C 6661341-T-C ***
6527513-A-G 6659472-A-G ***
6523962-G-A 6655921-G-A ***
6523945-A-C 6655904-A-C ***
6523936-G-T 6655895-G-T ***
6523933-G-A 6655892-G-A ***
9610881-G-T 9773272-G-T IR3_Prx ***
9654342-A-G 9816733-A-G IR3_Prx ***
6489397-C-A 6621356-C-A ***
10037964-A-G 10200355-A-G ***
13453216-T-C 11297540-T-C ***
13453201-G-A 11297525-G-A ***
13383008-G-T 11227332-G-T ***
13382966-T-A 11227290-T-A ***
13375503-G-T 11219827-G-T ***
13338450-T-A 11182774-T-A ***
13319146-C-T 11163470-C-T ***
13281770-G-A 11126094-G-A ***
13251357-A-T 11095681-A-T ***
13251345-C-A 11095669-C-A ***
13241472-T-A 11085796-T-A ***
13238369-G-T 11082693-G-T ***
10037998-A-C 10200389-A-C ***
10036204-T-C 10198595-T-C ***
9689285-C-G 9851676-C-G IR3_Prx ***
10036171-A-G 10198562-A-G ***
10036132-T-C 10198523-T-C ***
10022202-A-C 10184593-A-C ***
10020707-T-C 10183098-T-C ***
9973458-A-C 10135849-A-C ***
9964348-C-T 10126739-C-T ***
9900200-T-G 10062591-T-G ***
9880201-G-T 10042592-G-T 10×T***
9880184-G-T 10042575-G-T ***
9880174-G-T 10042565-G-T 9×T***
9716169-T-C 9878560-T-C IR3_Prx ***
9715981-G-T 9878372-G-T IR3_Prx ***
9713573-G-A 9875964-G-A IR3_Prx ***
6523928-T-C 6655887-T-C ***
6479421-T-C 6611380-T-C ***
22502985-G-T 20341099-G-T DYZ19 ***
2834885-G-T 2966844-G-T ***
4065013-A-C 4196972-A-C ***
4027630-C-A 4159589-C-A ***
3949406-C-A 4081365-C-A 20×A***
3816710-A-C 3948669-A-C ***
3746306-T-C 3878265-T-C ***
3736842-T-G 3868801-T-G ***
3498088-G-C 3630047-G-C ***
3430280-C-A 3562239-C-A ***
3280704-T-C 3412663-T-C ***
3122620-T-C 3254579-T-C ***
3036720-A-G 3168679-A-G ***
2894517-C-T 3026476-C-T ***
2834890-G-T 2966849-G-T ***
2832715-T-G 2964674-T-G ***
4398965-A-C 4530924-A-C ***
13313228-A-G 11157552-A-G ***
6354642-C-T 6486601-C-T ***
22714233-C-G 20552347-C-G ***
13639141-G-C 11483465-G-C ***
13257161-A-G 11101485-A-G ***
10020686-C-G 10183077-C-G ***
13639155-T-A 11483479-T-A ***
13223082-A-G 11067406-A-G ***
9330944-G-A 9493335-G-A ***
58886362-G-C 56704509-C-G ***
10024305-T-C 10186696-T-C ***
13312576-G-T 11156900-G-T ***
10022385-A-G 10184776-A-G ***
4182897-T-C 4314856-T-C ***
4421826-G-T 4553785-G-T ***
6333205-C-A 6465164-C-A IR3_Dst ***
5315497-A-T 5447456-A-T ***
6205388-T-G 6337347-T-G IR3_Dst ***
6205342-A-G 6337301-A-G IR3_Dst ***
6103841-T-G 6235800-T-G ***
5995320-T-C 6127279-T-C ***
5949098-T-G 6081057-T-G ***
5870052-G-T 6002011-G-T ***
5579265-T-C 5711224-T-C ***
5525706-T-C 5657665-T-C ***
5506060-T-C 5638019-T-C ***
5488398-T-C 5620357-T-C ***
5475128-T-G 5607087-T-G ***
5474838-G-C 5606797-G-C ***
5315583-C-A 5447542-C-A ***
5288252-G-T 5420211-G-T ***
4484875-C-A 4616834-C-A ***
5204641-C-A 5336600-C-A 22×A***
5181522-G-A 5313481-G-A ***
5179467-A-G 5311426-A-G ***
5179462-A-G 5311421-A-G ***
5179457-C-G 5311416-C-G ***
5179452-C-T 5311411-C-T ***
5045963-T-G 5177922-T-G ***
4998799-C-G 5130758-C-G ***
4937839-C-A 5069798-C-A ***
4834660-G-A 4966619-G-A ***
4826445-C-T 4958404-C-T ***
4618886-C-G 4750845-C-G ***
4517256-C-T 4649215-C-T ***
28800087-GAAT-AAAA 26653940-GAAT-AAAA ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 35V8X21122277101513378100931
Used in age calculations21122277101513378100931
Counts of SNPs53
Variant counts last updated 2017-09-19 23:24:13.



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