Tree Position

R-P312/S116 > Z40481 > ZZ11 > U152/S28 > L2/S139 > Z41150 > DF90 > FGC14641 > ~22237861-G-A > b38:8510480-A-T > b38:2851249-G-A > 7147233-C-G

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
W4ZLR
6413909-T-C 6545868-T-C +
22829042-T-C 20667156-T-C YY+
6677025-A-G 6808984-A-G YY+
17621055-A-G 15509175-A-G Y+
17328505-G-A 15216625-G-A YY+
23428938-G-A 21267052-G-A YY+
13434766-T-A 11279090-T-A +
5778385-T-G 5910344-T-G +
5753194-G-A 5885153-G-A +
22088136-T-C 19926250-T-C YY+
5091817-A-G 5223776-A-G +
13269017-A-G 11113341-A-G +
5017026-A-C 5148985-A-C +
4306981-G-T 4438940-G-T +
19156853-C-A 17044973-C-A YY+
4742744-G-A 4874703-G-A +
18207253-G-A 16095373-G-A F2735 YY+
9889609-G-A 10052000-G-A Y+
3318670-A-G 3450629-A-G +
3839592-T-C 3971551-T-C +
15000393-G-T 12888478-G-T YY+
4359449-C-T 4491408-C-T *
22216941-G-A 20055055-G-A DYZ19 *
15185226-A-T 13073312-A-T **
13468733-G-T 11313057-G-T **
28675884-C-A 26529737-C-A **
13274622-CT-C 11118946-CT-C 9×T**
28750708-C-T 26604561-C-T **
14129095-T-C 12008389-T-C **
23564039-C-A 21402153-C-A **
13468237-T-G 11312561-T-G **
13469057-A-G 11313381-A-G **
27262683-A-G 25116536-A-G P1_g3 **
13474399-T-A 11318723-T-A **
13474408-G-A 11318732-G-A **
13474467-T-A 11318791-T-A **
3462774-G-T 3594733-G-T **
3960352-A-ATGTG 4092311-A-ATGTG 16×TG**
3838601-CTTTTTTTTTTTTTTTTT-C 3970560-CTTTTTTTTTTTTTTTTT-C 31×T**
13714850-T-G 11559174-T-G **
4285741-G-T 4417700-G-T **
58974152-A-T 56828005-A-T **
13717749-C-G 11562073-C-G **
23105243-T-C 20943357-T-C **
13687611-G-T 11531935-G-T **
3542934-G-T 3674893-G-T **
4753370-C-T 4885329-C-T **
23094139-C-A 20932253-C-A **
58856446-T-A 56734425-A-T **
3249466-TTGTG-T 3381425-TTGTG-T 17×TG**
14740046-C-T 12628114-C-T **
5024203-AGTGT-A 5156162-AGTGT-A 13×GT**
58856427-A-G 56734444-T-C **
58848164-C-A 56742707-G-T **
14634718-T-C 12522787-T-C **
22465379-A-T 20303493-A-T DYZ19 **
15291270-G-T 13179369-G-T **
22293590-A-T 20131704-A-T DYZ19 **
27232179-C-CTTTCT 25086032-C-CTTTCT P1_g3 **
18059262-C-A 15947382-C-A **
59019562-G-A 56873415-G-A **
21408526-A-G 19246640-A-G **
10063763-G-A 10226154-G-A **
59010417-A-G 56864270-A-G **
19386617-A-T 17274737-A-T **
10089950-C-A 10252341-C-A **
21848034-A-T 19686148-A-T **
8322864-C-A 8454823-C-A **
17071190-C-CGAAAGAAA 14959310-C-CGAAAGAAA 6×GAAA**
7345460-G-A 7477419-G-A **
7347650-G-T 7479609-G-T **
59018657-GCTGT-G 56872510-GCTGT-G **
17966565-G-A 15854685-G-A **
9799293-G-A 9961684-G-A **
20105991-G-T 17994111-G-T P5_Dst **
7115993-C-A 7247952-C-A **
17797217-G-T 15685337-G-T **
13862113-ATGGAATGGAATGGAG-A 11741407-ATGGAATGGAATGGAG-A **
18002807-T-C 15890927-T-C P7_Gap **
18974961-G-T 16863081-G-T **
24858755-A-G 22712608-A-G P3_b2 ***
24768612-A-T 22622465-A-T P3_b2 ***
24750672-A-G 22604525-A-G P3_b2 ***
24973202-T-A 22827055-T-A g1 ***
23036722-A-G 20874836-A-G ***
24578505-A-C 22432358-A-C P3_t2 ***
24705991-A-T 22559844-A-T P3_b2 ***
24662713-C-A 22516566-C-A P3_b2 ***
24870382-A-C 22724235-A-C P3_b2 ***
24895776-T-A 22749629-T-A g1 ***
25126789-A-T 22980642-A-T g1 ***
24653085-T-C 22506938-T-C P3_b2 ***
25126893-A-T 22980746-A-T g1 ***
24650827-A-C 22504680-A-C P3_b2 ***
23357855-A-G 21195969-A-G ***
24539829-T-G 22393682-T-G P3_t2 ***
23357892-T-C 21196006-T-C ***
24026730-T-C 21880583-T-C ***
24081923-A-C 21935776-A-C P3_b1 ***
24142208-C-T 21996061-C-T P3_b1 ***
24175020-A-C 22028873-A-C P3_b1 ***
24277837-G-T 22131690-G-T P3_b1 ***
23363928-T-G 21202042-T-G ***
23357895-G-C 21196009-G-C ***
24302811-G-C 22156664-G-C P3_t1 ***
24303890-C-T 22157743-C-T P3_t1 ***
24539348-A-T 22393201-A-T P3_t2 ***
23357877-T-C 21195991-T-C ***
24385958-G-T 22239811-G-T ***
23357872-C-G 21195986-C-G ***
24489699-G-T 22343552-G-T ***
23357867-A-G 21195981-A-G ***
23357859-A-T 21195973-A-T ***
23569360-G-A 21407474-G-A ***
23357519-G-T 21195633-G-T ***
23317973-G-T 21156087-G-T ***
23029741-C-T 20867855-C-T ***
13484023-G-A 11328347-G-A ***
22986506-A-G 20824620-A-G ***
22225228-T-G 20063342-T-G DYZ19 ***
21598681-A-C 19436795-A-C ***
21830020-C-A 19668134-C-A ***
21830105-G-A 19668219-G-A ***
22000837-G-T 19838951-G-T ***
22219673-A-T 20057787-A-T DYZ19 ***
22225227-C-T 20063341-C-T DYZ19 ***
22225247-C-T 20063361-C-T DYZ19 ***
21386583-G-A 19224697-G-A ***
22226714-A-T 20064828-A-T DYZ19 ***
22236046-G-C 20074160-G-C DYZ19 ***
22238633-T-A 20076747-T-A DYZ19 ***
22239163-G-A 20077277-G-A DYZ19 ***
22264193-C-A 20102307-C-A DYZ19 ***
22267580-A-C 20105694-A-C DYZ19 ***
21408620-T-G 19246734-T-G ***
21386436-A-G 19224550-A-G ***
22278954-A-T 20117068-A-T DYZ19 ***
21337782-C-T 19175896-C-T ***
20684343-T-A 18522457-T-A P4_Prx ***
20686277-A-G 18524391-A-G P4_Prx ***
20739506-A-T 18577620-A-T P4_Prx ***
20865353-G-A 18703467-G-A P4_Dst ***
21028782-T-G 18866896-T-G P4_Dst ***
21337428-G-C 19175542-G-C ***
21337784-A-G 19175898-A-G ***
21352100-T-G 19190214-T-G ***
21337785-G-A 19175899-G-A ***
21337787-T-G 19175901-T-G ***
21337790-G-A 19175904-G-A ***
21337800-A-T 19175914-A-T ***
21337812-G-A 19175926-G-A ***
21337813-C-T 19175927-C-T ***
21337826-C-T 19175940-C-T ***
22276791-T-A 20114905-T-A DYZ19 ***
22286361-T-G 20124475-T-G DYZ19 ***
22986448-T-G 20824562-T-G ***
22535658-C-A 20373772-C-A ***
22506408-T-C 20344522-T-C DYZ19 ***
22508077-T-A 20346191-T-A DYZ19 ***
22508135-G-A 20346249-G-A DYZ19 ***
22511092-G-C 20349206-G-C DYZ19 ***
22512580-T-A 20350694-T-A DYZ19 ***
22518339-T-G 20356453-T-G ***
22546043-T-A 20384157-T-A ***
22490563-A-T 20328677-A-T DYZ19 ***
25566689-T-C 23420542-T-C P1_gr1 ***
22634960-G-T 20473074-G-T ***
22696358-A-C 20534472-A-C ***
22883176-T-C 20721290-T-C ***
22962054-G-T 20800168-G-T ***
22962057-G-C 20800171-G-C ***
22490683-G-T 20328797-G-T DYZ19 ***
22475886-A-C 20314000-A-C DYZ19 ***
22325302-A-G 20163416-A-G DYZ19 ***
22426932-A-G 20265046-A-G DYZ19 ***
22325352-A-G 20163466-A-G DYZ19 ***
22328145-A-C 20166259-A-C DYZ19 ***
22328214-C-T 20166328-C-T DYZ19 ***
22334529-C-G 20172643-C-G DYZ19 ***
22335258-G-A 20173372-G-A DYZ19 ***
22345085-A-G 20183199-A-G DYZ19 ***
22430054-G-T 20268168-G-T DYZ19 ***
22475871-C-T 20313985-C-T DYZ19 ***
22431085-G-C 20269199-G-C DYZ19 ***
22433411-A-G 20271525-A-G DYZ19 ***
22447475-A-T 20285589-A-T DYZ19 ***
22449340-T-C 20287454-T-C DYZ19 ***
22475791-C-A 20313905-C-A DYZ19 ***
22475863-A-G 20313977-A-G DYZ19 ***
22475870-T-G 20313984-T-G DYZ19 ***
25524781-C-A 23378634-C-A P1_gr1 ***
26329011-C-T 24182864-C-T P1_Y1 ***
25626775-T-G 23480628-T-G P1_b3 ***
13454199-ATCCAT-A 11298523-ATCCAT-A ***
10089950-CATC-AATCAGAA 10252341-CATC-AATCAGAA ***
10089953-C-CAGAA 10252344-C-CAGAA ***
13142212-CCTT-TCTC 10631698-CCTT-TCTC ***
13448897-T-TCCACC 11293221-T-TCCACC ***
13453675-TT-AC 11297999-TT-AC ***
13453695-TTCC-CTCG 11298019-TTCC-CTCG ***
13484002-AAACAC-TAAGAA 11328326-AAACAC-TAAGAA ***
9295987-CCACC-TCGCT 9458378-CCACC-TCGCT ***
13484043-GTG-ATT 11328367-GTG-ATT ***
13488813-CCC-TCA 11333137-CCC-TCA ***
13489281-GG-AA 11333605-GG-AA ***
13489601-ACCCC-TCCCA 11333925-ACCCC-TCCCA ***
13707540-TGGGAACA-AGGGAACG 11551864-TGGGAACA-AGGGAACG ***
13723574-TTC-CTG 11567898-TTC-CTG ***
13868024-TGGAA-AGGAT 11747318-TGGAA-AGGAT ***
9916395-CATTCATCTC-TCCTCAACTG 10078786-CATTCATCTC-TCCTCAACTG ***
7418072-TCA-T 7550031-TCA-T ***
14031722-C-CTTTT 11911016-C-CTTTT ***
13450790-TGG-CAT 11295114-TGG-CAT ***
58903126-G-C 56687745-C-G ***
58906835-A-T 56684036-T-A ***
58906885-A-T 56683986-T-A ***
58916341-C-G 56674530-G-C ***
58979669-C-T 56833522-C-T ***
59013435-G-T 56867288-G-T ***
22048695-AAAT-A 19886809-AAAT-A 9×AAT***
7361962-TTG-T 7493921-TTG-T ***
5776576-GA-G 5908535-GA-G 13×A***
3428687-G-GATATAT 3560646-G-GATATAT 22×AT***
3641037-C-CTTTCCTTTCT 3772996-C-CTTTCCTTTCT ***
5308778-CTATA-C 5440737-CTATA-C 11×TA***
5344469-CTTAAA-TTT 5476428-CTTAAA-TTT ***
6347741-A-AGACAGAAGGAAGGAAG 6479700-A-AGACAGAAGGAAGGAAG 9×GAAG***
7361961-GTTGT-G 7493920-GTTGT-G ***
13868050-GG-AC 11747344-GG-AC ***
14031732-T-TTCTA 11911026-T-TTCTA ***
58891018-T-C 56699853-A-G ***
28785760-CGGAATGGAGTGGAG-ACGAA 26639613-CGGAATGGAGTGGAG-ACGAA ***
22511238-CTT-GTA 20349352-CTT-GTA DYZ19 ***
22511545-ATTAC-CTTAA 20349659-ATTAC-CTTAA DYZ19 ***
22594754-A-ATG 20432868-A-ATG ***
22888403-C-CAAAAA 20726517-C-CAAAAA ***
25200847-CAAAGAAAGAAAG-GAAAGAAAGAAAGAC 23054700-CAAAGAAAGAAAG-GAAAGAAAGAAAGAC g1 15×AAAG***
27232188-C-CTTTTT 25086041-C-CTTTTT P1_g3 ***
28785854-GGGAATT-TGGAGTC 26639707-GGGAATT-TGGAGTC ***
22476625-GCAGG-ACAGC 20314739-GCAGG-ACAGC DYZ19 ***
58823383-CTCTATCT-TTACATTC 56767481-AGATAGAG-GAATGTAA ***
58830542-TCCA-ACCT 56760326-TGGA-AGGT ***
58856239-TCA-CCG 56734630-TGA-CGG ***
58980009-C-CTCTGT 56833862-C-CTCTGT ***
58980457-CTCCAG-C 56834310-CTCCAG-C ***
58980737-TTGCAT-CTCCAC 56834590-TTGCAT-CTCCAC ***
58982251-TGTA-GCTT 56836104-TGTA-GCTT ***
22511089-GTTG-TTTC 20349203-GTTG-TTTC DYZ19 ***
22476579-GTCCA-ATCCC 20314693-GTCCA-ATCCC DYZ19 ***
14080035-G-GATATATATAT 11959329-G-GATATATATAT 29×AT***
17454675-CA-TG 15342795-CA-TG ***
14496330-T-TGGATGGAG 12384535-T-TGGATGGAG ***
15305855-T-TAATAAA 13193957-T-TAATAAA ***
15683628-C-CA 13571748-C-CA 24×A***
15815336-CAAAAAAAAAAAAAAAAAAAAAAAAAAA-C 13703456-CAAAAAAAAAAAAAAAAAAAAAAAAAAA-C 57×A***
17275758-A-AAAGGGAAGGGAAGGG 15163878-A-AAAGGGAAGGGAAGGG 10×AAGGG***
17319971-G-GAGAAAGAAAGAAAGAA 15208091-G-GAGAAAGAAAGAAAGAA 13×AGAA***
17454649-CT-C 15342769-CT-C ***
18872169-T-TTTCG 16760289-T-TTTCG ***
22475870-TC-GT 20313984-TC-GT DYZ19 ***
19438450-A-AAAGAACGC 17326570-A-AAAGAACGC ***
20865352-T-TATCA 18703466-T-TATCA P4_Dst ***
21251812-C-CT 19089926-C-CT ***
21337768-TAA-T 19175882-TAA-T ***
21337782-CAAGATAAG-TAGAAGAAA 19175896-CAAGATAAG-TAGAAGAAA ***
21337812-GC-AT 19175926-GC-AT ***
22475843-TTTCCT-GTTTCC 20313957-TTTCCT-GTTTCC DYZ19 ***
58901508-G-T 56689363-C-A ***
58890725-G-C 56700146-C-G ***
25626811-T-A 23480664-T-A P1_b3 ***
26563205-C-T 24417058-C-T P1_g2 ***
26386630-A-C 24240483-A-C P1_Y1 ***
26397050-C-G 24250903-C-G P1_Y1 ***
26410453-C-T 24264306-C-T P1_Y1 ***
26543790-C-A 24397643-C-A P1_g2 ***
26547441-T-C 24401294-T-C P1_g2 ***
26548024-T-G 24401877-T-G P1_g2 ***
26563960-C-A 24417813-C-A P1_g2 ***
20616736-A-C 18454850-A-C P4_Prx ***
26598363-C-T 24452216-C-T P1_g2 ***
26659497-G-T 24513350-G-T P1_g2 ***
26671212-T-C 24525065-T-C P1_g2 ***
26676545-C-T 24530398-C-T P1_g2 ***
26777604-G-T 24631457-G-T P1_g2 ***
26938367-C-A 24792220-C-A P1_r3 ***
27021435-G-C 24875288-G-C P1_r4 ***
26344453-A-T 24198306-A-T P1_Y1 ***
26262233-A-T 24116086-A-T P1_Y1 ***
27272247-G-T 25126100-G-T P1_g3 ***
25851261-C-A 23705114-C-A P1_Y1 ***
25648634-C-A 23502487-C-A P1_b3 ***
25709867-C-T 23563720-C-T P1_b3 ***
25717318-G-A 23571171-G-A P1_b3 ***
25717374-C-A 23571227-C-A P1_b3 ***
25734029-T-G 23587882-T-G P1_b3 ***
25805440-T-G 23659293-T-G P1_b3 ***
25955297-T-C 23809150-T-C P1_Y1 ***
26250289-T-A 24104142-T-A P1_Y1 ***
25965147-G-T 23819000-G-T P1_Y1 ***
26010543-C-T 23864396-C-T P1_Y1 ***
26024264-C-A 23878117-C-A P1_Y1 ***
26024288-T-A 23878141-T-A P1_Y1 ***
26093501-G-T 23947354-G-T P1_Y1 ***
26098303-T-C 23952156-T-C P1_Y1 ***
26121551-T-C 23975404-T-C P1_Y1 ***
27248477-G-A 25102330-G-A P1_g3 ***
27304551-C-A 25158404-C-A P1_g3 ***
58890723-C-T 56700148-G-A ***
58823547-A-T 56767324-T-A ***
58823363-C-T 56767508-G-A ***
58823375-A-C 56767496-T-G ***
58823379-T-G 56767492-A-C ***
58823417-A-C 56767454-T-G ***
58823422-A-T 56767449-T-A ***
58823488-G-C 56767383-C-G ***
58827168-T-C 56763703-A-G ***
28522710-A-T 26376563-A-T ***
58841131-C-A 56749740-G-T ***
58854646-T-C 56736225-A-G ***
58858983-A-G 56731888-T-C ***
58884448-G-A 56706423-C-T ***
58890613-C-G 56700258-G-C ***
58890658-A-C 56700213-T-G ***
58890697-C-T 56700174-G-A ***
28785786-G-T 26639639-G-T ***
28442639-G-T 26296492-G-T P1_gr2 ***
27378489-T-C 25232342-T-C P1_g3 ***
28017052-C-T 25870905-C-T P1_Y2 ***
27384577-T-C 25238430-T-C P1_g3 ***
27394834-T-G 25248687-T-G P1_g3 ***
27462168-T-A 25316021-T-A P1_Y2 ***
27462376-T-A 25316229-T-A P1_Y2 ***
27500026-C-A 25353879-C-A P1_Y2 ***
27522156-T-C 25376009-T-C P1_Y2 ***
27715478-C-A 25569331-C-A P1_Y2 ***
28023584-G-T 25877437-G-T P1_Y2 ***
28390331-C-A 26244184-C-A P1_gr2 ***
28034387-A-G 25888240-A-G P1_Y2 ***
28098853-T-C 25952706-T-C P1_Y2 ***
28207101-A-C 26060954-A-C P1_b4 ***
28244992-G-T 26098845-G-T P1_b4 ***
28245038-T-A 26098891-T-A P1_b4 ***
28369169-C-A 26223022-C-A P1_gr2 ***
28370507-G-T 26224360-G-T P1_gr2 ***
20656561-A-T 18494675-A-T P4_Prx ***
18455222-T-G 16343342-T-G P6_Dst ***
20574978-C-T 18413092-C-T P5_Dst ***
13474498-C-G 11318822-C-G ***
13340745-AA-CC 11185069-AA-CC ***
58914043-C-T 56676828-G-A ***
13453662-C-A 11297986-C-A ***
15479976-C-T 13368096-C-T ***
58914044-A-G 56676827-T-C ***
13140034-A-T 10629520-A-T ***
27482970-A-G 25336823-A-G P1_Y2 ***
13340746-A-C 11185070-A-C ***
13453685-T-C 11298009-T-C ***
2955378-C-T 3087337-C-T 9×AT***
3089747-G-T 3221706-G-T ***
3205334-T-A 3337293-T-A ***
3490527-A-C 3622486-A-C ***
3499155-A-T 3631114-A-T ***
13340752-T-G 11185076-T-G ***
22490569-CTTT-ATTA 20328683-CTTT-ATTA DYZ19 ***
3534495-C-T 3666454-C-T ***
58996381-CACATA-GACCTC 56850234-CACATA-GACCTC ***
58996364-C-T 56850217-C-T ***
58996381-C-G 56850234-C-G ***
58996386-A-C 56850239-A-C ***
58996392-T-C 56850245-T-C ***
13866440-CATTG-GATCA 11745734-CATTG-GATCA ***
58982110-GCAC-ACAT 56835963-GCAC-ACAT ***
17281940-ATGAT-A 15170060-ATGAT-A ***
22490569-C-A 20328683-C-A DYZ19 ***
13485744-T-A 11330068-T-A ***
13486968-A-C 11331292-A-C ***
58872822-A-T 56718049-T-A ***
13692748-TCGC-ACGA 11537072-TCGC-ACGA ***
22510174-CTGG-GTAT 20348288-CTGG-GTAT DYZ19 ***
22490551-C-G 20328665-C-G DYZ19 ***
3534494-T-G 3666453-T-G ***
3548568-T-G 3680527-T-G ***
58979785-C-T 56833638-C-T ***
6727585-A-G 6859544-A-G ***
6167643-T-C 6299602-T-C IR3_Dst ***
6171008-A-T 6302967-A-T IR3_Dst ***
6232300-G-T 6364259-G-T IR3_Dst ***
6330339-C-T 6462298-C-T IR3_Dst ***
6342698-A-C 6474657-A-C ***
6568976-A-G 6700935-A-G ***
6747496-A-C 6879455-A-C ***
6116538-G-T 6248497-G-T ***
6795181-G-A 6927140-G-A ***
7076218-C-A 7208177-C-A ***
7118102-G-T 7250061-G-T ***
7296952-G-A 7428911-G-A ***
7311500-A-C 7443459-A-C ***
7379753-C-T 7511712-C-T ***
6151779-G-A 6283738-G-A IR3_Dst ***
6116534-G-T 6248493-G-T ***
3786768-T-G 3918727-T-G ***
4620672-A-T 4752631-A-T ***
4076603-T-A 4208562-T-A ***
4089522-G-T 4221481-G-T ***
4167635-C-T 4299594-C-T ***
4236471-C-G 4368430-C-G 17×A***
4437757-A-G 4569716-A-G ***
4439660-A-G 4571619-A-G ***
4773763-C-A 4905722-C-A ***
6007607-G-T 6139566-G-T ***
4914674-G-A 5046633-G-A ***
4949975-C-T 5081934-C-T ***
5148972-C-T 5280931-C-T ***
5261695-C-A 5393654-C-A ***
5780764-T-G 5912723-T-G ***
5885537-A-C 6017496-A-C ***
58979801-A-G 56833654-A-G ***
58979764-C-T 56833617-C-T ***
7711451-C-A 7843410-C-A ***
13489374-C-T 11333698-C-T ***
59016539-G-A 56870392-G-A ***
59017417-A-C 56871270-A-C ***
59017912-A-T 56871765-A-T ***
59017917-T-G 56871770-T-G ***
59024972-A-G 56878825-A-G ***
13488827-GTGACA-ACGACG 11333151-GTGACA-ACGACG ***
13474487-C-A 11318811-C-A ***
59015230-A-T 56869083-A-T ***
27838010-T-G 25691863-T-G P1_Y2 ***
9190853-G-A 9353244-G-A ***
10032317-A-C 10194708-A-C ***
58843054-C-T 56747817-G-A ***
58844979-TCCATTTGATGCCATC-T 56745872-CATGGGATGGCATCAA-C ***
28686556-TA-T 26540409-TA-T 13×A***
59016103-T-C 56869956-T-C ***
59011617-TTATC-T 56865470-TTATC-T ***
22236045-T-A 20074159-T-A DYZ19 ***
13489300-ATCG-CTCA 11333624-ATCG-CTCA ***
3930604-T-C 4062563-T-C ***
58826885-C-A 56763986-G-T ***
5240980-T-C 5372939-T-C ***
22511564-G-C 20349678-G-C DYZ19 ***
13971537-A-AAAG 11850831-A-AAAG ***
24326616-G-A 22180469-G-A P3_t1 ***
5739062-G-T 5871021-G-T FGC7516 10×T***
59010280-A-G 56864133-A-G ***
13262097-A-G 11106421-A-G ***
13383095-T-G 11227419-T-G ***
13486977-C-T 11331301-C-T ***
16729233-A-T 14617353-A-T ***
21580755-C-T 19418869-C-T Z12512 ***
58980512-C-T 56834365-C-T ***
58844564-A-C 56746307-T-G ***
22366448-A-T 20204562-A-T DYZ19 ***
58979733-C-T 56833586-C-T ***
13971571-AG-GA 11850865-AG-GA ***
22510062-T-A 20348176-T-A A4430 DYZ19 ***
58890696-G-C 56700175-C-G ***
58883182-A-C 56707689-T-G ***
13971541-G-GA 11850835-G-GA ***
22436027-T-G 20274141-T-G DYZ19 ***
13383111-A-C 11227435-A-C ***
19709699-G-A 17597819-G-A P5_Prx ***
14031746-C-CTTTT 11911040-C-CTTTT ***
13194767-GTCCT-CTCCA 11039091-GTCCT-CTCCA ***
17951299-ATTTTTTTTT-A 15839419-ATTTTTTTTT-A 25×T***
13713253-C-G 11557577-C-G ***
58859026-C-T 56731845-G-A ***
58979681-A-T 56833534-A-T ***
58979689-C-A 56833542-C-A ***
7106982-G-GCTCT 7238941-G-GCTCT 15×CT***
14031742-C-CTTTT 11911036-C-CTTTT ***
22981895-T-G 20820009-T-G ***
58979834-C-G 56833687-C-G ***
5180585-TATATATATAAGAA-T 5312544-TATATATATAAGAA-T ***
15263360-A-ATTTAAC 13151450-A-ATTTAAC ***
21829998-T-A 19668112-T-A ***
58853548-A-G 56737323-T-C ***
6347737-AGAAA-GGAAG 6479696-AGAAA-GGAAG ***
58979810-C-T 56833663-C-T ***
58996443-A-G 56850296-A-G ***
13465130-A-C 11309454-A-C ***
13866460-GAATG-TAATA 11745754-GAATG-TAATA ***
58979750-CACT-AATG 56833603-CACT-AATG ***
58979854-C-CTTCTCCAGCA 56833707-C-CTTCTCCAGCA ***
13730459-T-A 11574783-T-A ***
13449070-CTT-TTC 11293394-CTT-TTC ***
13450399-AAC-CAA 11294723-AAC-CAA ***
58982194-AGCTG-TGCTC 56836047-AGCTG-TGCTC ***
7490926-G-T 7622885-G-T IR1_L ***
7711456-G-A 7843415-G-A ***
20434236-C-A 18272350-C-A P5_Dst ***
16987498-G-T 14875618-G-T ***
16884320-G-A 14772440-G-A ***
16884323-A-C 14772443-A-C ***
16884329-T-C 14772449-T-C ***
16884333-G-A 14772453-G-A ***
16884345-T-C 14772465-T-C ***
16975614-G-T 14863734-G-T ***
17027218-T-C 14915338-T-C ***
16687964-G-C 14576084-G-C ***
17226408-T-A 15114528-T-A ***
17430094-G-A 15318214-G-A ***
17454658-T-A 15342778-T-A ***
17454668-G-C 15342788-G-C ***
17485052-A-T 15373172-A-T ***
17543498-T-A 15431618-T-A ***
16701022-C-A 14589142-C-A ***
16422218-T-C 14310338-T-C ***
17642058-G-T 15530178-G-T ***
16266221-T-C 14154341-T-C ***
15803920-T-C 13692040-T-C ***
15882970-A-T 13771090-A-T ***
15958271-T-G 13846391-T-G ***
16034931-A-G 13923051-A-G ***
16051171-C-T 13939291-C-T ***
16079462-C-T 13967582-C-T ***
16266227-A-T 14154347-A-T ***
16266463-G-A 14154583-G-A ***
16266240-C-G 14154360-C-G ***
16266261-G-T 14154381-G-T ***
16266275-G-A 14154395-G-A ***
16266306-C-T 14154426-C-T ***
16266330-T-C 14154450-T-C ***
16266336-G-A 14154456-G-A ***
17642006-C-T 15530126-C-T ***
17700717-C-T 15588837-C-T ***
15242659-C-A 13130745-C-A ***
19770666-C-T 17658786-C-T P5_Prx ***
19377188-G-A 17265308-G-A ***
19377205-A-G 17265325-A-G ***
19377214-G-A 17265334-G-A ***
19552130-T-A 17440250-T-A ***
19552400-G-T 17440520-G-T ***
19692158-A-G 17580278-A-G P5_Prx ***
19936699-G-T 17824819-G-T P5_Prx ***
19340182-G-T 17228302-G-T ***
19967460-A-T 17855580-A-T P5_Prx 16×T***
19986720-A-G 17874840-A-G P5_Prx ***
20000880-A-C 17889000-A-C P5_Prx ***
20131269-G-T 18019389-G-T P5_Dst ***
20242763-G-T 18080877-G-T P5_Dst ***
20359223-G-T 18197337-G-T P5_Dst ***
19340201-G-T 17228321-G-T ***
19155595-G-A 17043715-G-A ***
17775056-T-C 15663176-T-C ***
18293166-G-T 16181286-G-T P6_Prx ***
17876475-G-T 15764595-G-T ***
18119783-T-C 16007903-T-C ***
18135850-G-T 16023970-G-T ***
18158394-C-T 16046514-C-T ***
18280458-A-T 16168578-A-T P6_Prx ***
18292369-G-T 16180489-G-T P6_Prx ***
18293336-G-A 16181456-G-A P6_Prx ***
19155382-A-G 17043502-A-G ***
18293362-T-G 16181482-T-G P6_Prx ***
18293372-A-G 16181492-A-G P6_Prx ***
18293391-A-G 16181511-A-G P6_Prx ***
17616914-C-A 15505034-C-A ***
18456155-T-C 16344275-T-C P6_Dst ***
18456170-A-C 16344290-A-C P6_Dst ***
18861681-T-C 16749801-T-C ***
15733730-T-A 13621850-T-A ***
15214822-T-A 13102908-T-A ***
7711466-A-C 7843425-A-C ***
9754044-C-A 9916435-C-A ***
9351943-C-A 9514334-C-A ***
9429359-T-C 9591750-T-C ***
9576236-A-G 9738627-A-G IR3_Prx ***
9670459-T-A 9832850-T-A IR3_Prx ***
9679553-C-G 9841944-C-G IR3_Prx ***
9754041-G-A 9916432-G-A ***
9916395-C-T 10078786-C-T ***
9308579-T-C 9470970-T-C ***
9916396-A-C 10078787-A-C ***
9916397-T-C 10078788-T-C ***
9916401-T-A 10078792-T-A ***
9916404-C-G 10078795-C-G ***
9916413-A-G 10078804-A-G ***
9916428-T-G 10078819-T-G ***
9332166-C-T 9494557-C-T ***
9295991-C-T 9458382-C-T ***
10030914-A-C 10193305-A-C ***
7711542-T-G 7843501-T-G ***
7711471-C-A 7843430-C-A ***
7711474-A-C 7843433-A-C ***
7711477-C-G 7843436-C-G ***
7711487-G-A 7843446-G-A ***
7711492-G-A 7843451-G-A ***
7711522-G-A 7843481-G-A ***
7917528-T-G 8049487-T-G ***
9295966-T-C 9458357-T-C ***
8786396-C-A 8918355-C-A ***
8824898-G-T 8956857-G-T ***
9185244-G-A 9347635-G-A ***
9194997-C-A 9357388-C-A ***
9215552-T-G 9377943-T-G ***
9240067-T-G 9402458-T-G ***
9946277-A-G 10108668-A-G ***
10050074-C-G 10212465-C-G ***
15185967-G-A 13074053-G-A 10×A***
13733420-A-G 11577744-A-G ***
13489355-G-C 11333679-G-C ***
13489368-C-A 11333692-C-A ***
13489380-C-A 11333704-C-A ***
13645294-A-T 11489618-A-T ***
13699570-C-A 11543894-C-A ***
13707882-G-A 11552206-G-A ***
13798954-T-G 11678248-T-G ***
13487772-C-A 11332096-C-A ***
14019970-G-T 11899264-G-T ***
14128497-C-T 12007791-C-T ***
14624558-C-A 12512758-C-A ***
14721979-A-G 12610047-A-G ***
15115493-C-G 13003580-C-G ***
15115617-G-A 13003704-G-A ***
13487808-C-A 11332132-C-A ***
13487046-G-C 11331370-G-C ***
10050084-A-C 10212475-A-C ***
13453654-A-C 11297978-A-C ***
10051452-A-C 10213843-A-C ***
10056912-C-T 10219303-C-T ***
10081504-T-A 10243895-T-A ***
13348206-T-C 11192530-T-C ***
13428355-C-A 11272679-C-A ***
13441234-C-A 11285558-C-A ***
13455869-G-T 11300193-G-T ***
13484091-G-C 11328415-G-C ***
13461093-C-T 11305417-C-T ***
13465025-T-C 11309349-T-C ***
13465053-A-T 11309377-A-T ***
13465068-C-A 11309392-C-A ***
13465073-G-T 11309397-G-T ***
13483981-T-A 11328305-T-A ***
13484043-G-A 11328367-G-A ***
59019857-TGTGC-CGTGT 56873710-TGTGC-CGTGT ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: W4ZLR1615790696389238427439
Used in age calculations1615790696389238427439
Counts of SNPs108
Variant counts last updated 2018-01-19 20:59:10.



Big Tree Main Page