Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > Z251/S470 > Z16943 > A4257 > BY3972 > 13946523-G-A

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
WCUN5
14285680-A-G 12164974-A-G YY+
24511557-A-G 22365410-A-G +
17536611-C-A 15424731-C-A YY+
23322137-T-C 21160251-T-C YY+
24076233-T-C 21930086-T-C P3_b1 +
16934716-G-A 14822836-G-A YY+
16426025-T-C 14314145-T-C Y+
16186463-A-C 14074583-A-C Y+
22263271-C-T 20101385-C-T DYZ19 +
7681658-C-T 7813617-C-T YY+
14546396-C-G 12434597-C-G YY+
6633083-C-T 6765042-C-T YY+
8315605-C-T 8447564-C-T YY+
14344772-T-A 12224067-T-A Y+
14230983-T-G 12110277-T-G YY+
14000082-G-T 11879376-G-T Y+
13905881-A-C 11785175-A-C Y+
8793805-A-G 8925764-A-G YY+
9400212-C-A 9562603-C-A YY+
9496291-C-T 9658682-C-T +
23039231-C-A 20877345-C-A Y+
17367998-C-A 15256118-C-A YY+
6352716-C-T 6484675-C-T +
4308253-T-A 4440212-T-A +
22051011-C-T 19889125-C-T Y+
3479991-G-A 3611950-G-A +
28748660-C-T 26602513-C-T +
3823389-G-A 3955348-G-A +
19167921-C-T 17056041-C-T Y+
5751373-A-G 5883332-A-G +
4203575-T-A 4335534-T-A +
18983429-G-T 16871549-G-T YY+
28621570-A-G 26475423-A-G Y+
4479036-G-T 4610995-G-T +
5305184-G-A 5437143-G-A +
5633468-C-A 5765427-C-A +
26242498-G-A 24096351-G-A P1_Y1 +
21245500-C-G 19083614-C-G Y*
13457212-T-G 11301536-T-G *
26454995-T-C 24308848-T-C P1_Y1 *
58997781-G-A 56851634-G-A *
6903199-C-A 7035158-C-A **
58868381-G-T 56722490-C-A **
7481186-A-T 7613145-A-T IR1_L **
3209333-C-T 3341292-C-T **
8712971-A-G 8844930-A-G **
3452060-C-T 3584019-C-T **
6999747-G-A 7131706-G-A **
4620436-C-T 4752395-C-T **
7122212-A-T 7254171-A-T **
3633980-G-A 3765939-G-A **
8007778-G-A 8139737-G-A **
8007736-G-C 8139695-G-C **
6858625-A-G 6990584-A-G **
28157944-C-A 26011797-C-A P1_b4 **
59024398-G-GCACACACACACACACA 56878251-G-GCACACACACACACACA **
26376465-C-A 24230318-C-A P1_Y1 **
22448602-C-A 20286716-C-A DYZ19 **
17966002-C-T 15854122-C-T **
18768018-A-G 16656138-A-G **
18796609-A-T 16684729-A-T **
18968997-C-T 16857117-C-T **
22458452-T-A 20296566-T-A DYZ19 **
22448617-T-A 20286731-T-A DYZ19 **
19176329-A-T 17064449-A-T **
17785546-T-C 15673666-T-C **
22447231-C-G 20285345-C-G DYZ19 **
22447223-A-C 20285337-A-C DYZ19 **
22426199-T-C 20264313-T-C DYZ19 **
21577840-A-G 19415954-A-G **
22366554-C-T 20204668-C-T DYZ19 **
22153547-G-T 19991661-G-T **
17933382-A-G 15821502-A-G **
22691214-A-G 20529328-A-G **
9784398-A-T 9946789-A-T **
15762224-C-A 13650344-C-A **
10048686-A-G 10211077-A-G **
25604447-C-T 23458300-C-T P1_gr1 **
13482463-A-T 11326787-A-T **
13489511-G-T 11333835-G-T **
14390828-G-T 12270124-G-T **
15595963-C-G 13484083-C-G **
16000904-G-T 13889024-G-T **
17702386-T-G 15590506-T-G **
24486803-G-T 22340656-G-T **
24486781-A-T 22340634-A-T **
16241003-C-T 14129123-C-T **
16710676-T-C 14598796-T-C **
16815103-T-C 14703223-T-C **
17161481-T-C 15049601-T-C **
58890978-T-A 56699893-A-T **
22269749-G-C 20107863-G-C DYZ19 **
59024109-A-G 56877962-A-G **
59022708-A-G 56876561-A-G **
13489490-C-T 11333814-C-T **
18395723-T-TTA 16283843-T-TTA P6_Gap 27×TA**
59011613-C-T 56865466-C-T **
59011617-TTATC-T 56865470-TTATC-T **
59011022-T-A 56864875-T-A **
59022705-C-G 56876558-C-G **
6646237-A-AT 6778196-A-AT 9×T**
59011244-G-A 56865097-G-A **
21472768-C-CCTATAGTT 19310882-C-CCTATAGTT **
59024202-A-C 56878055-A-C **
28708401-C-T 26562254-C-T **
23230805-G-C 21068919-G-C Z14531 FGC23646 **
22458453-C-T 20296567-C-T Z24040 DYZ19 **
22447226-C-A 20285340-C-A DYZ19 **
10079478-TA-T 10241869-TA-T **
14075599-GAAAAAAAAAAAAAAAAAAAAAA-G 11954893-GAAAAAAAAAAAAAAAAAAAAAA-G 38×A**
16783412-TA-T 14671532-TA-T 13×A***
16363514-AT-A 14251634-AT-A 8×T**
58855913-A-T 56734958-T-A **
59020532-TA-T 56874385-TA-T **
59022103-G-A 56875956-G-A **
58855842-T-A 56735029-A-T **
58855843-G-T 56735028-C-A **
21474737-G-GT 19312851-G-GT **
24919967-C-T 22773820-C-T g1 ***
23695843-AC-A 21533957-AC-A ***
25058554-A-T 22912407-A-T g1 ***
25065169-C-A 22919022-C-A g1 ***
24274848-G-T 22128701-G-T P3_b1 ***
24258819-G-A 22112672-G-A P3_b1 ***
25207648-C-A 23061501-C-A P2_r1 ***
25288389-A-C 23142242-A-C P2_r1 ***
24257672-C-A 22111525-C-A P3_b1 ***
24447138-A-AGAAG 22300991-A-AGAAG ***
24244902-C-A 22098755-C-A P3_b1 ***
24710110-A-ATTG 22563963-A-ATTG P3_b2 ***
24211260-T-G 22065113-T-G P3_b1 ***
24169695-G-T 22023548-G-T P3_b1 ***
25964727-CTT-C 23818580-CTT-C P1_Y1 16×T***
24009008-A-C 21862861-A-C ***
23728454-A-T 21566568-A-T ***
26990952-CAAG-AAAA 24844805-CAAG-AAAA P1_r4 ***
23564049-C-A 21402163-C-A ***
23448536-T-G 21286650-T-G ***
23316028-A-ATTTATTTG 21154142-A-ATTTATTTG ***
25026875-G-C 22880728-G-C g1 ***
25026878-G-T 22880731-G-T g1 ***
24896246-C-A 22750099-C-A g1 ***
24954583-T-G 22808436-T-G g1 ***
22476785-CTGC-GTGT 20314899-CTGC-GTGT DYZ19 ***
22490569-CT-C 20328683-CT-C DYZ19 ***
24910006-G-T 22763859-G-T g1 ***
24909967-C-T 22763820-C-T g1 ***
22490620-TTCC-CCCT 20328734-TTCC-CCCT DYZ19 ***
24903552-G-T 22757405-G-T g1 ***
24901645-T-A 22755498-T-A g1 ***
22447223-AGAC-CGAA 20285337-AGAC-CGAA DYZ19 ***
24893911-A-T 22747764-A-T g1 ***
22458452-TC-AT 20296566-TC-AT DYZ19 ***
24856859-G-A 22710712-G-A P3_b2 ***
24771083-T-A 22624936-T-A P3_b2 ***
24710714-C-A 22564567-C-A P3_b2 ***
23230805-GCT-CCC 21068919-GCT-CCC ***
24954642-G-A 22808495-G-A g1 ***
24973212-C-A 22827065-C-A g1 ***
24705964-A-C 22559817-A-C P3_b2 ***
24524719-A-C 22378572-A-C P3_t2 ***
24992077-A-T 22845930-A-T g1 ***
24997362-G-T 22851215-G-T g1 ***
58829349-CATTCGA-TATTTGC 56761516-TCGAATG-GCAAATA ***
58890258-GTCGAA-CTTGAT 56700608-TTCGAC-ATCAAG ***
58855842-TG-AT 56735028-CA-AT ***
22424087-T-G 20262201-T-G DYZ19 ***
58989509-ACAGGGGCAT-GCTGGAGCAC 56843362-ACAGGGGCAT-GCTGGAGCAC ***
22436965-T-A 20275079-T-A DYZ19 ***
22436950-C-A 20275064-C-A DYZ19 ***
22436921-G-T 20275035-G-T DYZ19 ***
22436911-T-C 20275025-T-C DYZ19 ***
22436904-T-A 20275018-T-A DYZ19 ***
22436637-G-T 20274751-G-T DYZ19 ***
22436481-A-C 20274595-A-C DYZ19 ***
22433813-G-T 20271927-G-T DYZ19 ***
22433388-C-T 20271502-C-T DYZ19 ***
22426267-C-A 20264381-C-A DYZ19 ***
58989524-TGTA-CGTATC 56843377-TGTA-CGTATC ***
22424080-A-C 20262194-A-C DYZ19 ***
58980577-TTCCA-CTCCT 56834430-TTCCA-CTCCT ***
22343401-G-T 20181515-G-T DYZ19 ***
22327425-A-T 20165539-A-T DYZ19 ***
22316370-T-G 20154484-T-G DYZ19 ***
22298197-C-A 20136311-C-A DYZ19 ***
22293383-T-A 20131497-T-A DYZ19 ***
59013265-GGC-TGT 56867118-GGC-TGT ***
22293382-G-T 20131496-G-T DYZ19 ***
22272770-A-G 20110884-A-G DYZ19 ***
59013334-TAC-CAT 56867187-TAC-CAT ***
22272761-G-T 20110875-G-T DYZ19 ***
22272755-T-C 20110869-T-C DYZ19 ***
22272736-G-C 20110850-G-C DYZ19 ***
22272734-C-G 20110848-C-G DYZ19 ***
58980739-GCAT-CCAC 56834592-GCAT-CCAC ***
22447609-T-C 20285723-T-C DYZ19 ***
58858912-CATTG-AATTC 56731955-CAATG-GAATT ***
22508960-A-C 20347074-A-C DYZ19 ***
23230807-T-C 21068921-T-C ***
58870120-TC-AG 56720750-GA-CT ***
22777261-C-T 20615375-C-T ***
25377757-G-T 23231610-G-T P2_r2 ***
22713852-T-A 20551966-T-A ***
58900242-ACATTCGATTTCTTGC-A 56690604-GAATCGAATGGCAAGA-G ***
58912877-CGATTCC-TGAGTCA 56677988-GGAATCG-TGACTCA ***
22668696-A-C 20506810-A-C ***
58970173-TAAA-T 56824026-TAAA-T 11×A***
58975549-TTCCATTCCATTCGAG-T 56829402-TTCCATTCCATTCGAG-T ***
22510079-A-G 20348193-A-G DYZ19 ***
22509974-C-G 20348088-C-G DYZ19 ***
22508946-A-C 20347060-A-C DYZ19 ***
58980343-GTGACACAA-TTTGCACAG 56834196-GTGACACAA-TTTGCACAG ***
22508798-A-C 20346912-A-C DYZ19 ***
22508777-A-C 20346891-A-C DYZ19 ***
22508637-G-T 20346751-G-T DYZ19 ***
22490589-A-T 20328703-A-T DYZ19 ***
22490575-G-A 20328689-G-A DYZ19 ***
22490550-A-C 20328664-A-C DYZ19 ***
22486371-T-G 20324485-T-G DYZ19 ***
22476821-G-A 20314935-G-A DYZ19 ***
22469221-G-T 20307335-G-T DYZ19 ***
22463435-C-A 20301549-C-A DYZ19 ***
58979124-T-TC 56832977-T-TC ***
22449998-C-G 20288112-C-G DYZ19 ***
58979815-CTCTCC-TGCTCA 56833668-CTCTCC-TGCTCA ***
25359081-A-G 23212934-A-G P2_r2 ***
25560359-A-G 23414212-A-G P1_gr1 ***
25498221-A-T 23352074-A-T P2_r2 ***
28402855-T-G 26256708-T-G P1_gr2 ***
58829560-A-T 56761311-T-A ***
58829349-C-T 56761522-G-A ***
58819868-A-G 56771003-T-C ***
25593509-C-CT 23447362-C-CT P1_gr1 18×T***
17726455-CA-C 15614575-CA-C 11×A***
3702819-TACAC-T 3834778-TACAC-T 16×AC***
28602540-T-C 26456393-T-C ***
28602403-C-A 26456256-C-A ***
4269771-CTTT-C 4401730-CTTT-C 24×T***
4636107-ATATATAT-A 4768066-ATATATAT-A ***
8125028-G-GAAAGAAAA 8256987-G-GAAAGAAAA ***
28457940-A-T 26311793-A-T ***
28233948-C-G 26087801-C-G P1_b4 ***
58829574-A-G 56761297-T-C ***
8125038-A-AAGAAAGAG 8256997-A-AAGAAAGAG ***
28135791-T-C 25989644-T-C P1_b4 ***
28080050-A-G 25933903-A-G P1_Y2 ***
27938293-A-T 25792146-A-T P1_Y2 ***
8843536-ATTTTT-A 8975495-ATTTTT-A 23×T***
27914593-C-G 25768446-C-G P1_Y2 ***
27907186-G-A 25761039-G-A P1_Y2 ***
13446563-T-TCCATA 11290887-T-TCCATA ***
27907164-A-G 25761017-A-G P1_Y2 ***
27874490-G-T 25728343-G-T P1_Y2 ***
27760003-A-C 25613856-A-C P1_Y2 ***
27691097-A-C 25544950-A-C P1_Y2 ***
27662382-A-C 25516235-A-C P1_Y2 ***
28686556-T-TA 26540409-T-TA 13×A***
58840815-C-G 56750056-G-C ***
27633344-G-T 25487197-G-T P1_Y2 ***
58869746-C-T 56721125-G-A ***
59021543-C-A 56875396-C-A ***
59014286-T-G 56868139-T-G ***
13448027-AT-TC 11292351-AT-TC ***
58989555-C-T 56843408-C-T ***
58989536-G-A 56843389-G-A ***
58989531-G-A 56843384-G-A ***
58980581-A-T 56834434-A-T ***
58915980-C-A 56674891-G-T ***
58912299-A-T 56678572-T-A ***
58900223-A-C 56690648-T-G ***
8085438-C-CA 8217397-C-CA 15×A***
58884774-C-T 56706097-G-A ***
58875627-G-C 56715244-C-G ***
58869668-T-C 56721203-A-G ***
21391590-TA-T 19229704-TA-T 12×A***
58868988-A-G 56721883-T-C ***
58868933-A-G 56721938-T-C ***
14142337-A-AT 12021631-A-AT 13×T***
58863380-C-A 56727491-G-T ***
58862237-T-C 56728634-A-G ***
58859950-C-T 56730921-G-A ***
58857036-T-A 56733835-A-T ***
58856730-T-G 56734141-A-C ***
58848309-A-G 56742562-T-C ***
58847953-T-G 56742918-A-C ***
58843489-C-G 56747382-G-C ***
28522751-CT-C 26376604-CT-C 17×T***
58840841-G-A 56750030-C-T ***
27644248-A-C 25498101-A-C P1_Y2 ***
27616631-C-T 25470484-C-T P1_Y2 ***
25502781-C-T 23356634-C-T P1_gr1 ***
25974950-G-C 23828803-G-C P1_Y1 ***
26533361-T-G 24387214-T-G P1_g2 ***
26480338-T-C 24334191-T-C P1_Y1 ***
16364058-C-CTATA 14252178-C-CTATA 27×TA***
26376467-C-A 24230320-C-A P1_Y1 ***
26352063-G-A 24205916-G-A P1_Y1 ***
26344496-A-C 24198349-A-C P1_Y1 ***
26344474-G-T 24198327-G-T P1_Y1 ***
26320517-A-T 24174370-A-T P1_Y1 ***
17787104-GGCA-G 15675224-GGCA-G ***
26246722-C-T 24100575-C-T P1_Y1 ***
20865377-C-CAA 18703491-C-CAA P4_Dst ***
26140548-T-C 23994401-T-C P1_Y1 ***
26090037-A-G 23943890-A-G P1_Y1 ***
25945095-G-A 23798948-G-A P1_Y1 ***
15278805-T-TATTAC 13166899-T-TATTAC ***
25813735-T-G 23667588-T-G P1_b3 ***
25813710-T-A 23667563-T-A P1_b3 ***
25699780-T-A 23553633-T-A P1_b3 ***
25689267-C-T 23543120-C-T P1_b3 ***
25634237-C-G 23488090-C-G P1_b3 ***
25628278-G-T 23482131-G-T P1_b3 ***
25626802-G-A 23480655-G-A P1_b3 ***
22269749-GCT-CCA 20107863-GCT-CCA DYZ19 ***
25590228-T-A 23444081-T-A P1_gr1 ***
59024007-A-C 56877860-A-C ***
22293382-GT-TA 20131496-GT-TA DYZ19 ***
25505425-C-T 23359278-C-T P1_gr1 ***
22436504-CGGTG-AGGTA 20274618-CGGTG-AGGTA DYZ19 ***
26584211-G-A 24438064-G-A P1_g2 ***
26699542-T-C 24553395-T-C P1_g2 ***
27616504-A-T 25470357-A-T P1_Y2 ***
27266895-A-G 25120748-A-G P1_g3 ***
27502715-A-T 25356568-A-T P1_Y2 ***
13449764-TATTCCATTCT-CATTGCATTCC 11294088-TATTCCATTCT-CATTGCATTCC ***
27467793-G-A 25321646-G-A P1_Y2 ***
13478313-GGGGC-AGGGT 11322637-GGGGC-AGGGT ***
13480962-TGTC-CGTG 11325286-TGTC-CGTG ***
13480989-TCTAGA-CCTTGG 11325313-TCTAGA-CCTTGG ***
27455209-C-A 25309062-C-A P1_Y2 ***
27396387-T-A 25250240-T-A P1_g3 ***
27371136-A-G 25224989-A-G P1_g3 ***
13661296-G-GAATGA 11505620-G-GAATGA ***
27352345-T-C 25206198-T-C P1_g3 ***
27340393-G-A 25194246-G-A P1_g3 ***
27320120-T-C 25173973-T-C P1_g3 ***
13737178-CGAAC-GGAAT 11581502-CGAAC-GGAAT ***
26737255-A-T 24591108-A-T P1_g2 ***
13811067-AGGAATGGAATGGAAT-A 11690361-AGGAATGGAATGGAAT-A 11×GGAAT***
27189244-T-A 25043097-T-A P1_g3 ***
13829459-G-GGAATT 11708753-G-GGAATT ***
14233385-TCCT-CCCC 12112679-TCCT-CCCC ***
27168455-C-A 25022308-C-A P1_g3 ***
27131981-C-T 24985834-C-T P1_g3 ***
26991004-C-A 24844857-C-A P1_r4 ***
14467037-GTCTG-ATCTA 12346306-GTCTG-ATCTA ***
14664254-T-TA 12552320-T-TA ***
26986565-G-T 24840418-G-T P1_r4 ***
15263359-A-AAATTAC 13151449-A-AAATTAC ***
26760450-G-A 24614303-G-A P1_g2 ***
26737308-C-A 24591161-C-A P1_g2 ***
27254730-T-A 25108583-T-A P1_g3 ***
22508768-C-G 20346882-C-G DYZ19 ***
22260972-G-A 20099086-G-A DYZ19 ***
22479689-G-C 20317803-G-C DYZ19 ***
2698758-T-A 2830717-T-A ***
58865682-C-G 56725189-G-C ***
22272766-T-G 20110880-T-G DYZ19 ***
22274615-G-C 20112729-G-C DYZ19 ***
10024118-T-C 10186509-T-C ***
22274573-A-T 20112687-A-T DYZ19 ***
13448843-C-G 11293167-C-G ***
58989545-A-G 56843398-A-G ***
22436508-G-A 20274622-G-A DYZ19 ***
13480999-A-G 11325323-A-G ***
58853282-C-G 56737589-G-C ***
22447200-C-G 20285314-C-G DYZ19 ***
22293430-G-A 20131544-G-A DYZ19 ***
22508778-A-T 20346892-A-T DYZ19 ***
3205534-C-A 3337493-C-A ***
58910478-C-G 56680393-G-C ***
58989560-A-T 56843413-A-T ***
13127443-G-T 10616929-G-T ***
13127442-T-A 10616928-T-A ***
22293409-C-G 20131523-C-G DYZ19 ***
22510049-GTTC-CTTG 20348163-GTTC-CTTG DYZ19 ***
22283765-A-T 20121879-A-T DYZ19 ***
15015255-CTTTTTTT-C 12903343-CTTTTTTTT-C 24×T***
25626811-T-A 23480664-T-A P1_b3 ***
22490512-G-A 20328626-G-A DYZ19 ***
58885032-A-G 56705839-T-C ***
22745183-C-CG 20583297-C-CG ***
22307913-T-C 20146027-T-C DYZ19 ***
13489614-CACC-AA 11333938-CACC-AA ***
2758615-T-C 2890574-T-C ***
3209339-C-T 3341298-C-T ***
13486815-GG-CA 11331139-GG-CA ***
5347478-A-G 5479437-A-G ***
7058787-G-T 7190746-G-T ***
7058669-C-A 7190628-C-A ***
6623873-G-T 6755832-G-T ***
6340978-G-A 6472937-G-A IR3_Dst ***
6312768-T-G 6444727-T-G IR3_Dst ***
6279243-C-T 6411202-C-T IR3_Dst ***
6274056-T-C 6406015-T-C IR3_Dst ***
6264678-G-T 6396637-G-T IR3_Dst ***
6250252-T-G 6382211-T-G IR3_Dst ***
6215517-C-A 6347476-C-A IR3_Dst ***
6206943-C-T 6338902-C-T IR3_Dst ***
6202326-G-A 6334285-G-A IR3_Dst ***
6131158-G-T 6263117-G-T ***
5521888-T-C 5653847-T-C ***
5194904-A-T 5326863-A-T ***
3460206-T-C 3592165-T-C ***
5043829-G-T 5175788-G-T ***
4949670-T-A 5081629-T-A ***
4949659-G-T 5081618-G-T ***
4949204-A-C 5081163-A-C ***
4818642-G-A 4950601-G-A ***
4620710-T-C 4752669-T-C ***
4090780-A-T 4222739-A-T ***
3873505-T-A 4005464-T-A ***
3873501-C-T 4005460-C-T ***
3630614-G-T 3762573-G-T ***
3534577-C-A 3666536-C-A ***
3491178-C-T 3623137-C-T ***
3490899-T-G 3622858-T-G ***
3460909-G-T 3592868-G-T ***
15263362-T-TTAAATC 13151452-T-TTAAATC ***
13480921-G-A 11325245-G-A ***
7123367-T-C 7255326-T-C ***
25207741-T-G 23061594-T-G P2_r1 ***
59018423-C-A 56872276-C-A ***
59017328-A-G 56871181-A-G ***
59017324-A-T 56871177-A-T ***
59013371-C-T 56867224-C-T ***
59013336-C-T 56867189-C-T ***
59013334-T-C 56867187-T-C ***
59011061-T-A 56864914-T-A ***
59008408-C-T 56862261-C-T ***
8278755-G-T 8410714-G-T ***
25207815-T-A 23061668-T-A P2_r1 ***
22225067-T-A 20063181-T-A FGC27602 DYZ19 ***
22469291-T-C 20307405-T-C DYZ19 ***
22469207-C-G 20307321-C-G DYZ19 ***
8462064-CAAAAAAAAAAAAA-C 8594023-CAAAAAAAAAAAAA-C 26×A***
24278301-A-G 22132154-A-G P3_b1 ***
13480979-A-T 11325303-A-T ***
5784062-CA-C 5916021-CA-C 21×A***
7107011-C-A 7238970-C-A S814 20×TA***
58982110-GCAC-CCAT 56835963-GCAC-CCAT ***
25424574-C-CT 23278427-C-CT P2_r2 17×T***
58823348-A-T 56767523-T-A ***
59007229-T-C 56861082-T-C ***
22298198-A-T 20136312-A-T DYZ19 ***
22261137-C-G 20099251-C-G DYZ19 ***
7135386-ATT-A 7267345-ATT-A 22×T***
5354713-C-CAT 5486672-C-CAT 16×AT***
6692829-CA-C 6824788-CA-C 14×A***
16815087-C-T 14703207-C-T ***
13726697-C-G 11571021-C-G ***
58869729-C-T 56721142-G-A ***
4697475-T-TA 4829434-T-TA 14×A***
13375723-TGC-CGT 11220047-TGC-CGT ***
15683628-CA-C 13571748-CA-C 24×A***
9204506-C-G 9366897-C-G ***
13866714-CGAAC-GGAAT 11746008-CGAAC-GGAAT ***
13866697-TTA-CTC 11745991-TTA-CTC ***
13449890-TTTTT-CGTATTC 11294214-TTTTT-CGTATTC ***
59007958-TCAAAAAAAA-T 56861811-TCAAAAAAAA-T ***
23389531-CTTTTTT-C 21227645-CTTTTTT-C 18×T***
22510062-T-A 20348176-T-A A4430 DYZ19 ***
22507367-A-C 20345481-A-C DYZ19 ***
22507425-C-T 20345539-C-T DYZ19 ***
3822962-G-GATATAT 3954921-G-GATATAT 26×AT***
22319291-TC-T 20157405-TC-T DYZ19 ***
13448850-A-T 11293174-A-T ***
58827095-C-G 56763776-G-C ***
58827074-C-T 56763797-G-A ***
9199452-G-T 9361843-G-T ***
22467550-G-A 20305664-G-A DYZ19 ***
24425337-A-ATGCT 22279190-A-ATGCT ***
13971607-G-A 11850901-G-A ***
58843448-T-A 56747423-A-T ***
26991006-G-A 24844859-G-A P1_r4 ***
7927084-A-AT 8059043-A-AT ***
22231718-G-C 20069832-G-C DYZ19 ***
22436969-A-C 20275083-A-C DYZ19 ***
13489621-C-CCTT 11333945-C-CCTT ***
4650472-GATAT-G 4782431-GATAT-G 24×AT***
9753996-G-T 9916387-G-T ***
16344414-T-TTCTTCC 14232534-T-TTCTTCC ***
25520291-C-T 23374144-C-T P1_gr1 ***
58856019-A-G 56734852-T-C ***
28008591-CA-C 25862444-CA-C P1_Y2 11×A***
13329879-A-AAT 11174203-A-AAT 25×AT***
7059145-G-T 7191104-G-T ***
7123427-C-T 7255386-C-T ***
22237943-C-A 20076057-C-A DYZ19 ***
17702455-C-T 15590575-C-T ***
18767316-C-T 16655436-C-T ***
18544670-T-A 16432790-T-A ***
18530625-G-T 16418745-G-T P6_Dst ***
18521075-C-T 16409195-C-T P6_Dst ***
18512846-T-A 16400966-T-A P6_Dst ***
18465519-G-T 16353639-G-T P6_Dst ***
18461962-G-T 16350082-G-T P6_Dst ***
18344200-C-A 16232320-C-A P6_Prx ***
18157697-A-C 16045817-A-C ***
18006782-G-T 15894902-G-T P7_Gap ***
17994616-G-A 15882736-G-A P7_Prx ***
17932101-C-A 15820221-C-A ***
17784736-G-C 15672856-G-C ***
17697858-T-G 15585978-T-G ***
23364087-CA-C 21202201-CA-C 16×A***
17683968-G-A 15572088-G-A ***
17627944-A-T 15516064-A-T ***
17450799-G-T 15338919-G-T ***
17249773-C-A 15137893-C-A ***
17165021-C-G 15053141-C-G ***
17127099-T-A 15015219-T-A ***
17125135-A-T 15013255-A-T ***
17125131-A-C 15013251-A-C ***
17125078-C-A 15013198-C-A ***
17124153-A-T 15012273-A-T ***
16710792-T-G 14598912-T-G ***
16618342-A-G 14506462-A-G ***
16503549-A-C 14391669-A-C ***
16429019-T-C 14317139-T-C ***
18796563-G-A 16684683-G-A ***
18974831-C-A 16862951-C-A ***
16084082-A-T 13972202-A-T ***
20895942-T-G 18734056-T-G P4_Dst ***
22229316-C-T 20067430-C-T DYZ19 ***
22226082-T-C 20064196-T-C DYZ19 ***
22198214-A-G 20036328-A-G ***
22150463-T-A 19988577-T-A ***
22090703-T-C 19928817-T-C ***
22012940-A-T 19851054-A-T ***
21955226-A-T 19793340-A-T ***
21698010-C-A 19536124-C-A ***
21669133-A-T 19507247-A-T ***
21634859-G-T 19472973-G-T ***
21634831-A-T 19472945-A-T ***
21096426-T-A 18934540-T-A ***
20971207-T-A 18809321-T-A P4_Dst ***
20909691-G-A 18747805-G-A P4_Dst ***
20769302-T-G 18607416-T-G P4_Prx ***
18976444-A-T 16864564-A-T ***
20736631-A-G 18574745-A-G P4_Prx ***
20693696-G-A 18531810-G-A P4_Prx ***
20647990-T-C 18486104-T-C P4_Prx ***
20632284-A-C 18470398-A-C P4_Prx ***
20575068-G-T 18413182-G-T P5_Dst ***
20470076-T-C 18308190-T-C P5_Dst ***
20470071-G-A 18308185-G-A P5_Dst ***
19820954-G-T 17709074-G-T P5_Prx ***
19553782-G-A 17441902-G-A ***
19547426-C-T 17435546-C-T ***
19155300-C-T 17043420-C-T ***
19085860-G-T 16973980-G-T ***
19019597-C-G 16907717-C-G ***
19019596-C-T 16907716-C-T ***
16210227-T-G 14098347-T-G ***
15856579-A-G 13744699-A-G ***
7164381-T-G 7296340-T-G ***
9556907-A-C 9719298-A-C IR3_Prx ***
13222118-A-G 11066442-A-G ***
13141065-T-C 10630551-T-C ***
13140932-T-C 10630418-T-C ***
13140922-C-T 10630408-C-T ***
13127399-T-G 10616885-T-G ***
13127398-C-T 10616884-C-T ***
13127371-G-T 10616857-G-T ***
9900165-A-T 10062556-A-T ***
9900144-T-G 10062535-T-G ***
9779384-C-A 9941775-C-A ***
9706020-G-A 9868411-G-A IR3_Prx ***
9668175-C-T 9830566-C-T IR3_Prx ***
9656239-C-A 9818630-C-A IR3_Prx ***
9559478-T-G 9721869-T-G IR3_Prx ***
9540168-T-C 9702559-T-C IR3_Prx ***
13441218-A-G 11285542-A-G ***
9540120-T-G 9702511-T-G IR3_Prx ***
9540003-T-G 9702394-T-G IR3_Prx ***
9409591-A-T 9571982-A-T ***
9365893-A-G 9528284-A-G ***
9241233-A-C 9403624-A-C ***
9199926-G-C 9362317-G-C ***
8812655-A-C 8944614-A-C ***
8724632-G-T 8856591-G-T ***
8276592-C-G 8408551-C-G ***
8237148-C-T 8369107-C-T ***
8057104-A-T 8189063-A-T ***
7632873-A-T 7764832-A-T ***
7496305-A-C 7628264-A-C IR1_L ***
7347481-A-T 7479440-A-T ***
13223601-A-G 11067925-A-G ***
13455471-G-T 11299795-G-T ***
15853059-A-C 13741179-A-C ***
14182456-G-A 12061750-G-A ***
15803756-T-C 13691876-T-C ***
15297344-T-A 13185443-T-A ***
15296857-T-C 13184956-T-C ***
15231505-T-G 13119591-T-G ***
15141028-C-T 13029115-C-T ***
15102323-C-T 12990411-C-T ***
14737482-T-C 12625550-T-C ***
14695940-C-A 12584006-C-A ***
14515339-A-G 12403540-A-G ***
14391216-T-G 12270512-T-G ***
14258683-G-T 12137977-G-T ***
14233379-T-C 12112673-T-C ***
14213391-A-G 12092685-A-G ***
14213387-A-G 12092681-A-G ***
14167427-C-A 12046721-C-A ***
13459575-G-A 11303899-G-A ***
14118749-G-A 11998043-G-A ***
14118738-A-G 11998032-A-G ***
14025695-A-G 11904989-A-G ***
13985629-G-T 11864923-G-T ***
13817889-T-A 11697183-T-A ***
13798718-C-A 11678012-C-A ***
13737544-G-C 11581868-G-C ***
13654288-C-A 11498612-C-A ***
13518601-G-T 11362925-G-T ***
13489634-C-T 11333958-C-T ***
13482478-T-C 11326802-T-C ***
13480856-G-T 11325180-G-T ***
13474593-G-C 11318917-G-C ***
13461101-T-C 11305425-T-C ***
18971875-A-C 16859995-A-C ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: WCUN51642898697510358442846
Used in age calculations1642898697510358442846
Counts of SNPs2214
Variant counts last updated 2017-11-13 20:59:38.



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