Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > ZZ10 > Z253 > Z2534 > ZZ5 > Z2185 > Z2186 > L1066 > BY414 > BY2709

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
544260
BigY2
544260
13449579-C-T 11293903-C-T A*
13687855-T-C 11532179-T-C A*
6212252-T-C 6344211-T-C IR3_Dst ***A*
11620-G-C +
22509184-T-A 20347298-T-A DYZ19 +
21916424-G-T 19754538-G-T YY++
21395063-A-G 19233177-A-G YY++
21389527-G-A 19227641-G-A YY++
18637510-A-G 16525630-A-G YY++
18566538-A-G 16454658-A-G Y102110 YY++
18204842-T-A 16092962-T-A YY++
15048821-G-T 12936912-G-T YY++
13617248-A-T 11461572-A-T **+
8674750-C-A 8806709-C-A YY+**
22446268-G-A 20284382-G-A DYZ19 ***+
19144848-T-G 17032968-T-G YY++
28786732-T-C 26640585-T-C *
19170371-A-G 17058491-A-G Y****
16490806-A-G 14378926-A-G **
15038335-T-A 12926425-T-A **
14743888-T-G 12631957-T-G **
14771669-G-A 12659738-G-A **
14771713-C-T 12659782-C-T **
14789343-T-C 12677414-T-C **
14799854-T-C 12687925-T-C **
14835322-A-T 12723389-A-T **
14933560-C-T 12821625-C-T **
14967153-A-G 12855228-A-G **
14986116-A-T 12874184-A-T **
15050074-C-A 12938165-C-A **
15041005-C-A 12929095-C-A **
14691750-T-G 12579816-T-G **
15059879-T-C 12947971-T-C **
15066480-G-A 12954571-G-A **
15068997-C-A 12957088-C-A **
15070413-C-A 12958504-C-A **
15111637-C-A 12999724-C-A **
15113645-C-A 13001732-C-A **
15138204-G-C 13026291-G-C **
15157830-C-A 13045917-C-A **
15173520-T-G 13061606-T-G **
15215541-C-A 13103627-C-A **
17013885-C-T 14902005-C-T **
14689229-C-A 12577295-C-A **
15239552-C-A 13127638-C-A **
14502054-C-A 12390259-C-A **
14387079-C-A 12266375-C-A **
14389914-C-A 12269210-C-A **
14395647-A-C 12274943-A-C **
14398373-C-A 12277669-C-A **
14425633-A-T 12304908-A-T **
14430449-C-A 12309722-C-A **
14447523-A-G 12326796-A-G **
14449709-G-A 12328982-G-A **
14449727-C-A 12329000-C-A **
14462769-A-T 12342042-A-T **
17023417-C-A 14911537-C-A **
14683069-A-G 12571135-A-G **
14502604-A-T 12390809-A-T **
14506087-A-T 12394292-A-T **
14521808-C-A 12410009-C-A **
14531516-C-A 12419717-C-A **
14533486-C-A 12421687-C-A **
14574062-A-G 12462262-A-G **
14582252-G-T 12470452-G-T **
14593733-T-C 12481933-T-C **
14593761-C-A 12481961-C-A **
14605165-G-A 12493367-G-A **
14607856-T-G 12496058-T-G **
15218855-G-T 13106941-G-T **
15282232-C-A 13170331-C-A **
16662444-C-A 14550564-C-A **
16056117-C-A 13944237-C-A **
15957774-A-T 13845894-A-T **
15997442-C-A 13885562-C-A **
16006174-C-A 13894294-C-A **
16015199-C-A 13903319-C-A **
16018342-A-C 13906462-A-C **
16030044-C-A 13918164-C-A **
16032442-C-A 13920562-C-A **
16033572-G-T 13921692-G-T **
16051196-C-A 13939316-C-A **
16055979-C-T 13944099-C-T **
16063451-A-T 13951571-A-T **
15921353-T-A 13809473-T-A **
16071140-T-G 13959260-T-G **
16119963-C-CTATG 14008083-C-CTATG P8_Prx **
16120026-G-T 14008146-G-T P8_Prx **
16175186-C-A 14063306-C-A **
16228179-G-A 14116299-G-A **
16279012-C-A 14167132-C-A **
16313414-G-A 14201534-G-A **
16320381-A-G 14208501-A-G **
16344640-C-A 14232760-C-A **
16428125-C-A 14316245-C-A **
16466841-G-T 14354961-G-T **
15937312-C-A 13825432-C-A **
15790586-C-A 13678706-C-A **
15358736-C-T 13246855-C-T **
16855367-G-T 14743487-G-T **
15365239-T-A 13253359-T-A **
15388489-C-A 13276609-C-A **
16980078-C-G 14868198-C-G **
16933192-A-G 14821312-A-G **
16926142-C-A 14814262-C-A **
14354530-C-T 12233825-C-T **
16922314-C-T 14810434-C-T **
16922313-G-A 14810433-G-A **
16868666-A-T 14756786-A-T **
16865378-G-T 14753498-G-T **
15397784-C-A 13285904-C-A **
15789689-C-A 13677809-C-A **
16703527-C-A 14591647-C-A **
16703448-G-A 14591568-G-A **
15559020-C-T 13447140-C-T **
16666190-C-A 14554310-C-A **
15566729-A-C 13454849-A-C **
15593141-G-A 13481261-G-A **
15606606-G-C 13494726-G-C **
15650664-C-A 13538784-C-A **
15733878-TCA-T 13621998-TCA-T **
15739366-C-A 13627486-C-A **
15769170-G-T 13657290-G-T **
14376137-GC-G 12255433-GC-G **
14075031-C-A 11954325-C-A **
14352124-G-A 12231419-G-A **
10986405-A-C **
10972431-T-A **
10972439-T-C **
10972449-T-C **
10976652-A-C **
10983588-G-C **
10983589-G-A **
10983597-T-A **
10983610-C-A **
10985937-T-A **
10986401-C-T **
10989461-A-C **
10972391-C-T **
10989467-C-G **
10992962-A-ACCATTCCATT **
10993540-T-C **
10997576-T-A **
11007453-T-A **
11007460-T-C **
11007470-TTCTATTCCAC-T **
11007513-C-A **
11007525-CTCCATTCCAT-C **
11007539-AC-A **
11007542-CCACT-C **
10972416-C-T **
10950557-C-A **
11007578-A-C **
10847883-G-C **
10814854-C-A **
10814855-T-A **
10814859-A-T **
10814872-TC-T **
10814875-ACTTC-A **
10816351-C-A **
10835368-T-G **
10835375-C-A **
10836627-T-C **
10844749-A-C **
10850303-T-A **
10950539-C-A **
10860816-C-A **
10869993-A-G **
10873162-C-A **
10885325-C-A **
10914290-T-C **
10932589-C-T **
10932612-T-A **
10936258-A-C **
10941632-C-A **
10944690-A-AAC **
10948580-C-G **
11007567-C-A **
11009426-T-C **
14326575-T-C 12205869-T-C **
13940122-G-T 11819416-G-T **
11672520-G-T **
13801420-A-G 11680714-A-G **
13804330-C-A 11683624-C-A **
13821489-G-A 11700783-G-A **
13836890-A-T 11716184-A-T **
13897885-C-G 11777179-C-G **
13920695-G-C 11799989-G-C **
13928226-C-A 11807520-C-A **
13933027-C-A 11812321-C-A **
13937127-C-T 11816421-C-T **
13961294-C-A 11840588-C-A **
11653691-G-A **
14011346-G-T 11890640-G-T **
14058910-G-C 11938204-G-C **
14069963-T-C 11949257-T-C **
17193035-C-A 15081155-C-A **
14102075-C-G 11981369-C-G **
14198170-C-A 12077464-C-A **
14228179-C-T 12107473-C-T **
14271656-C-A 12150950-C-A **
14285765-C-A 12165059-C-A **
14285801-C-A 12165095-C-A **
14301726-G-T 12181020-G-T **
11671507-A-T **
13717497-A-G 11561821-A-G **
11014215-C-A **
13282768-C-A 11127092-C-A **
11024679-ACTT-A **
11024685-C-CGAA **
11027053-C-A **
11027085-A-C **
11034890-T-G **
11035341-C-A **
11036006-A-C **
13196499-C-A 11040823-C-A **
13239682-T-A 11084006-T-A **
13249597-C-G 11093921-C-G **
13258674-C-A 11102998-C-A **
13290304-C-A 11134628-C-A **
13625707-G-C 11470031-G-C **
13310753-C-A 11155077-C-A **
13350933-C-A 11195257-C-A **
13433540-G-A 11277864-G-A **
13456099-C-CGTTAA 11300423-C-CGTTAA **
13456156-T-C 11300480-T-C **
13480461-A-C 11324785-A-C **
13480475-C-T 11324799-C-T **
13480496-AG-A 11324820-AG-A **
13522994-A-T 11367318-A-T **
13600998-T-C 11445322-T-C **
13605134-T-G 11449458-T-G **
17158627-T-A 15046747-T-A **
17675521-T-A 15563641-T-A **
17201758-A-C 15089878-A-C **
23802269-A-C 21640383-A-C **
23189578-C-G 21027692-C-G **
23311201-T-C 21149315-T-C **
23311371-A-C 21149485-A-C **
23345712-T-C 21183826-T-C **
23411300-A-G 21249414-A-G **
23411404-T-C 21249518-T-C **
23433527-G-T 21271641-G-T **
23441239-C-T 21279353-C-T **
23790211-A-G 21628325-A-G **
23790246-T-G 21628360-T-G **
23875303-G-T 21713417-G-T **
23138235-A-T 20976349-A-T **
23875653-C-A 21713767-C-A **
21757768-T-C **
23996895-C-T 21850748-C-T **
24291299-T-C 22145152-T-C P3_t1 **
24371906-G-T 22225759-G-T **
24405244-C-A 22259097-C-A **
24407229-A-T 22261082-A-T **
24421996-G-A 22275849-G-A **
24422053-G-A 22275906-G-A **
24432864-A-C 22286717-A-C **
24664407-T-G 22518260-T-G P3_b2 **
23186096-T-C 21024210-T-C **
23098182-C-A 20936296-C-A **
24884196-A-T 22738049-A-T g1 **
22563048-A-T 20401162-A-T **
21991088-C-A 19829202-C-A **
22023236-C-A 19861350-C-A **
22052639-G-T 19890753-G-T **
22055283-T-A 19893397-T-A **
22055519-G-A 19893633-G-A **
22064225-G-T 19902339-G-T **
22241445-A-T 20079559-A-T DYZ19 **
22241479-C-G 20079593-C-G DYZ19 **
22241545-C-G 20079659-C-G DYZ19 **
22426996-G-C 20265110-G-C DYZ19 **
22439730-G-T 20277844-G-T DYZ19 **
22690964-C-T 20529078-C-T **
23091654-C-A 20929768-C-A **
22703607-A-AG 20541721-A-AG **
22783180-G-A 20621294-G-A **
22790955-C-A 20629069-C-A **
22812013-G-T 20650127-G-T **
22845981-C-A 20684095-C-A **
22875878-T-C 20713992-T-C **
22885990-C-A 20724104-C-A **
22899806-C-A 20737920-C-A **
22920678-A-T 20758792-A-T **
23043270-C-A 20881384-C-A **
23051593-G-T 20889707-G-T **
24836734-G-GGGAA 22690587-G-GGGAA P3_b2 15×GGAA**
25096445-A-AAG 22950298-A-AAG g1 **
21851018-C-T 19689132-C-T **
28791360-GTGCAGAGGAA-G 26645213-GTGCAGAGGAA-G **
28635613-C-A 26489466-C-A **
28643918-A-T 26497771-A-T **
28719446-C-A 26573299-C-A Y113318 **
28724740-T-C 26578593-T-C **
28724779-C-A 26578632-C-A **
28746958-C-G 26600811-C-G **
28754988-C-A 26608841-C-A **
28758262-A-C 26612115-A-C **
28767221-A-G 26621074-A-G **
28773983-C-A 26627836-C-A **
56681976-G-T **
28608520-C-A 26462373-C-A **
56681977-G-T **
56681990-T-TCACCCGACA **
56682013-A-G **
56682015-T-A **
56771158-G-A **
56837827-A-C **
56839114-C-T **
56842126-G-T **
56847164-C-T **
56847222-A-T **
56847223-C-T **
28612175-G-T 26466028-G-T **
28598516-C-A 26452369-C-A **
25096448-G-A 22950301-G-A g1 20×GAAA**
27521950-T-C 25375803-T-C P1_Y2 **
25592926-A-C 23446779-A-C P1_gr1 **
25956008-G-A 23809861-G-A P1_Y1 **
25956009-TAC-T 23809862-TAC-T P1_Y1 **
26400784-T-C 24254637-T-C P1_Y1 **
26415767-C-T 24269620-C-T P1_Y1 **
26415779-A-T 24269632-A-T P1_Y1 **
26415786-A-C 24269639-A-C P1_Y1 **
26415788-T-A 24269641-T-A P1_Y1 **
27021913-C-A 24875766-C-A P1_r4 **
27398506-G-A 25252359-G-A P1_g3 **
27423452-G-T 25277305-G-T P1_g3 **
27546772-T-G 25400625-T-G P1_Y2 **
28550016-G-T 26403869-G-T **
27838564-T-G 25692417-T-G P1_Y2 **
27952019-G-T 25805872-G-T P1_Y2 **
28473916-G-A 26327769-G-A **
28473925-A-C 26327778-A-C **
28478747-T-C 26332600-T-C **
28482916-A-G 26336769-A-G **
28482919-A-C 26336772-A-C **
28482921-C-T 26336774-C-T **
28497055-C-A 26350908-C-A **
28510416-C-A 26364269-C-A **
28531460-A-G 26385313-A-G **
21991044-G-T 19829158-G-T **
21839983-TA-T 19678097-TA-T **
17217152-C-A 15105272-C-A **
18945427-G-T 16833547-G-T **
18611732-C-A 16499852-C-A **
18625583-C-A 16513703-C-A **
18636761-C-A 16524881-C-A **
18687532-A-G 16575652-A-G **
18707487-C-A 16595607-C-A **
18717876-T-A 16605996-T-A 16×A**
18738157-C-A 16626277-C-A **
18768328-C-A 16656448-C-A **
18895684-C-A 16783804-C-A **
18906229-G-A 16794349-G-A **
18948005-G-A 16836125-G-A **
18328810-A-G 16216930-A-G P6_Prx **
18956247-C-A 16844367-C-A **
18972724-C-A 16860844-C-A **
18990285-C-A 16878405-C-A **
18996933-G-C 16885053-G-C **
19000190-A-G 16888310-A-G **
19007822-C-A 16895942-C-A **
19043073-C-A 16931193-C-A **
19088511-C-A 16976631-C-A **
19129650-C-A 17017770-C-A A15016 **
19161977-C-T 17050097-C-T **
19187429-C-T 17075549-C-T **
18511568-ATATATATATATATATATATATATATATAT-A 16399688-ATATATATATATATATATATATATATATAT-A P6_Dst **
18328808-A-G 16216928-A-G P6_Prx **
19223256-T-G 17111376-T-G **
17741246-G-A 15629366-G-A **
17301230-T-G 15189350-T-G **
17338542-ATTAGG-A 15226662-ATTAGG-A **
17374486-G-T 15262606-G-T **
17426953-A-T 15315073-A-T **
17465073-AAGTT-A 15353193-AAGTT-A **
17500620-G-T 15388740-G-T **
10802157-A-C **
17675522-C-G 15563642-C-G **
17676406-C-G 15564526-C-G **
17716670-C-A 15604790-C-A **
17738002-G-C 15626122-G-C **
17802027-A-G 15690147-A-G **
18284770-C-G 16172890-C-G P6_Prx **
17843112-G-T 15731232-G-T **
17864000-C-A 15752120-C-A **
17883736-A-C 15771856-A-C **
17929528-A-G 15817648-A-G **
17963503-C-A 15851623-C-A **
18159846-A-C 16047966-A-C **
18212570-C-A 16100690-C-A **
18244484-C-A 16132604-C-A **
18262052-C-A 16150172-C-A **
18262070-T-C 16150190-T-C **
18278032-C-T 16166152-C-T P6_Prx **
19216583-C-G 17104703-C-G **
19299113-C-A 17187233-C-A **
21791991-C-A 19630105-C-A **
21224893-G-A 19063007-G-A **
20798761-A-G 18636875-A-G P4_Prx **
21012125-A-C 18850239-A-C P4_Dst **
21136751-C-A 18974865-C-A **
21148562-C-T 18986676-C-T **
21156849-TTG-T 18994963-TTG-T **
21156858-A-G 18994972-A-G **
21162458-C-A 19000572-C-A **
21162729-C-A 19000843-C-A **
21224870-T-A 19062984-T-A **
21224892-T-C 19063006-T-C **
21224938-G-A 19063052-G-A **
20693253-T-TC 18531367-T-TC P4_Prx **
21224941-G-C 19063055-G-C **
21224961-T-C 19063075-T-C **
21224981-C-T 19063095-C-T **
21285420-C-A 19123534-C-A **
21375516-C-A 19213630-C-A **
21408353-C-A 19246467-C-A **
21435004-G-C 19273118-G-C **
21464484-C-A 19302598-C-A **
21531570-A-T 19369684-A-T **
21556910-C-A 19395024-C-A **
21713421-T-G 19551535-T-G **
20778634-A-C 18616748-A-C P4_Prx **
20657384-T-G 18495498-T-G P4_Prx **
19362615-T-C 17250735-T-C **
19524469-C-A 17412589-C-A **
19362658-C-A 17250778-C-A **
19389677-C-A 17277797-C-A **
19391238-G-A 17279358-G-A **
19409390-T-C 17297510-T-C **
19422572-G-A 17310692-G-A **
19438264-G-A 17326384-G-A **
19438401-T-A 17326521-T-A **
19460665-AGG-A 17348785-AGG-A **
19462053-C-A 17350173-C-A **
19465874-A-G 17353994-A-G **
19482233-C-G 17370353-C-G **
19544485-T-G 17432605-T-G **
20603936-A-T 18442050-A-T P5_Dst **
19551887-A-T 17440007-A-T **
19558253-T-C 17446373-T-C **
19631412-G-T 17519532-G-T P5_Prx **
19686891-G-GC 17575011-G-GC P5_Prx **
19831752-A-AG 17719872-A-AG P5_Prx **
19831767-G-A 17719887-G-A P5_Prx **
19921660-G-T 17809780-G-T P5_Prx **
19921676-T-C 17809796-T-C P5_Prx **
20233048-A-AC 18071162-A-AC P5_Dst **
20458851-C-A 18296965-C-A P5_Dst **
20473365-G-T 18311479-G-T P5_Dst **
10814841-T-A **
10004846-C-A 10167237-C-A PF419 **
10799545-C-T **
22093144-A-T 19931258-A-T **
3158927-C-A 3290886-C-A **
15146400-C-A 13034487-C-A **
11012257-G-A **
15733877-C-A 13621997-C-A **
4929207-G-A 5061166-G-A **
10673725-C-A **
10986591-G-T **
28780319-T-A 26634172-T-A Y130167 **
21839987-C-T 19678101-C-T **
22093156-G-T 19931270-G-T **
16783412-TAAA-T 14671532-TAAA-T 13×A**
22774889-TTC-T 20613003-TTC-T **
27398508-CTCA-C 25252361-CTCA-C P1_g3 **
10964319-C-A **
13268790-G-T 11113114-G-T **
15530222-C-A 13418342-C-A **
10069975-C-A 10232366-C-A **
7864367-C-A 7996326-C-A **
22867222-C-A 20705336-C-A **
15068888-G-C 12956979-G-C **
15061728-G-T 12949820-G-T **
26153981-G-T 24007834-G-T P1_Y1 **
11034887-C-A **
8376391-C-A 8508350-C-A **
11036015-C-A **
10955478-CACCCT-C **
10955494-TCTACTC-T **
6916357-C-A 7048316-C-A **
17567357-C-A 15455477-C-A **
6831329-C-A 6963288-C-A **
10821856-CAAT-C **
11035987-A-G **
11035990-A-C **
11035999-CTTCTT-C **
11036032-CTATATTCCTT-C **
11034861-TGAC-T **
23127414-CAAA-C 20965528-CAAA-C 24×A**
14073977-C-A 11953271-C-A **
23476305-T-TA 21314419-T-TA 10×A**
56847139-TC-T **
5560254-C-A 5692213-C-A **
11027043-C-A **
11027061-T-C **
13462326-C-T 11306650-C-T **
3696373-C-A 3828332-C-A **
23790347-A-C 21628461-A-C **
21211965-C-A 19050079-C-A **
22783187-T-A 20621301-T-A **
11009756-G-T **
3660129-A-G 3792088-A-G **
2876866-A-G 3008825-A-G **
2885818-C-A 3017777-C-A **
2903396-C-A 3035355-C-A **
3151889-T-C 3283848-T-C **
3158918-A-G 3290877-A-G **
3248844-C-A 3380803-C-A **
3471062-G-T 3603021-G-T **
3550570-AAC-A 3682529-AAC-A **
3591619-A-G 3723578-A-G **
3712126-C-A 3844085-C-A **
2693256-C-A 2825215-C-A **
3728054-C-A 3860013-C-A **
3900938-G-T 4032897-G-T **
4144111-G-T 4276070-G-T **
4243620-A-G 4375579-A-G **
4302545-A-C 4434504-A-C **
4361289-T-A 4493248-T-A **
4473047-C-G 4605006-C-G **
4537415-A-T 4669374-A-T **
4537871-G-A 4669830-G-A **
4542566-C-A 4674525-C-A **
2708288-T-A 2840247-T-A **
2652036-G-A 2783995-G-A **
23625628-T-C 21463742-T-C **
9700762-C-A 9863153-C-A IR3_Prx **
10678598-C-A **
10986400-A-T **
5785878-C-A 5917837-C-A **
8314178-A-G 8446137-A-G **
3834680-C-A 3966639-C-A **
20603901-A-G 18442015-A-G P5_Dst **
9014283-C-A 9176674-C-A **
7105005-A-T 7236964-A-T **
9316747-C-A 9479138-C-A **
10879305-G-T **
10943763-G-T **
11002052-C-G **
11002060-C-T **
20751882-T-TC 18589996-T-TC P4_Prx **
14701340-C-A 12589406-C-A **
2783708-G-A 2915667-G-A **
18926911-T-A 16815031-T-A **
10654133-G-C **
7829594-C-A 7961553-C-A **
14184373-C-A 12063667-C-A **
21224970-C-T 19063084-C-T **
19187420-C-T 17075540-C-T **
21482782-G-TTT 19320896-G-TTT **
4752990-G-T 4884949-G-T **
10885166-C-T **
19125684-G-A 17013804-G-A **
10972443-A-C **
19507146-C-A 17395266-C-A **
10666462-G-C **
10666467-C-T **
10666482-G-C **
10666488-C-T **
10988822-C-T **
8216430-A-G 8348389-A-G **
10770634-TTTCCA-T **
13960976-C-A 11840270-C-A 14×A**
22783177-G-A 20621291-G-A **
21713458-T-C 19551572-T-C **
10951066-C-A **
56835184-C-A **
56835197-T-C **
10925015-T-C **
14176420-G-T 12055714-G-T **
16186706-C-CA 14074826-C-CA 9×A**
4521603-C-A 4653562-C-A **
10689118-C-CATTAA **
10770668-C-G BY29332 **
16271830-C-A 14159950-C-A **
10750663-T-A **
17201756-A-T 15089876-A-T **
7717737-CTTCTTTCT-C 7849696-CTTCTTTCT-C 13×TTCT**
15491889-C-A 13380009-C-A 9×TA**
6753360-CA-C 6885319-CA-C **
58908890-C-T 56681981-G-A **
4537586-CTTTT-C 4669545-CTTTT-C 21×T**
4409301-C-T 4541260-C-T **
4583023-C-T 4714982-C-T **
6765639-GGT-G 6897598-GGT-G **
14473753-G-A 12353022-G-A **
58998467-T-C 56852320-T-C **
13462277-C-G 11306601-C-G **
7087861-C-T 7219820-C-T **
13809185-A-C 11688479-A-C **
14372075-C-A 12251371-C-A **
21134906-C-T 18973020-C-T YP6169 **
10019865-C-A 10182256-C-A **
2959998-T-A 3091957-T-A **
5241254-G-T 5373213-G-T **
20252786-C-A 18090900-C-A P5_Dst **
20252779-C-A 18090893-C-A P5_Dst **
28482917-T-G 26336770-T-G **
14771677-C-T 12659746-C-T **
10750667-C-A **
10827086-T-C **
5842220-C-A 5974179-C-A **
20603882-A-G 18441996-A-G P5_Dst **
4485733-G-A 4617692-G-A **
24523593-CAAA-C 22377446-CAAA-C 13×A**
10689085-T-A **
10689090-T-C **
10689091-C-T **
10780429-G-T **
13259058-C-A 11103382-C-A **
11027051-C-T **
11025525-A-T **
5853507-G-T 5985466-G-T **
10899865-G-T **
14698458-CAAA-C 12586524-CAAA-C 19×A**
9602672-T-G 9765063-T-G IR3_Prx **
18307719-A-AT 16195839-A-AT P6_Prx **
19125693-T-C 17013813-T-C **
14784737-A-T 12672807-A-T **
11677150-A-T **
18628150-C-A 16516270-C-A **
21224927-C-T 19063041-C-T **
10827078-G-T **
10868831-T-C **
10925023-C-T **
10750671-T-G **
10846673-C-G **
10750677-T-C **
10750683-C-T **
10750684-T-C **
10955503-A-AT **
10955516-C-CTGTCA **
10836608-G-C **
20440399-T-TTGG 18278513-T-TTGG P5_Dst **
10846660-C-A **
10846668-T-G **
15769037-C-A 13657157-C-A **
10925012-C-CTACCTCATTT **
10988849-C-A **
10988867-T-C **
10988869-C-G **
15364034-T-G 13252154-T-G **
14077144-C-A 11956438-C-A **
25990666-C-T 23844519-C-T P1_Y1 **
8230611-TA-T 8362570-TA-T 8×A**
16855363-T-A 14743483-T-A **
7922592-G-T 8054551-G-T **
23476320-C-A 21314434-C-A **
4583015-A-C 4714974-A-C **
10691024-C-CTTCCA **
4952098-T-A 5084057-T-A **
7735094-C-A 7867053-C-A **
7431634-C-A 7563593-C-A **
7432469-C-A 7564428-C-A **
7471036-A-T 7602995-A-T IR1_L **
7582091-A-G 7714050-A-G **
7645117-G-T 7777076-G-T **
7664706-G-GT 7796665-G-GT **
7695799-C-A 7827758-C-A **
7695808-T-G 7827767-T-G **
7704729-C-G 7836688-C-G **
7986648-C-T 8118607-C-T **
7377680-C-G 7509639-C-G **
8001994-C-A 8133953-C-A **
8043106-G-C 8175065-G-C **
8078624-G-T 8210583-G-T **
8140318-G-T 8272277-G-T **
8217928-C-A 8349887-C-A **
8314170-TG-T 8446129-TG-T **
8314180-T-G 8446139-T-G **
8321578-C-G 8453537-C-G **
8351543-G-A 8483502-G-A **
7389382-T-C 7521341-T-C **
7358331-C-A 7490290-C-A **
8568505-G-T 8700464-G-T **
7184902-C-A 7316861-C-A **
7105009-T-A 7236968-T-A **
7105013-AG-A 7236972-AG-A **
7105021-T-G 7236980-T-G **
7105034-T-C 7236993-T-C **
7105035-G-A 7236994-G-A **
7105039-C-T 7236998-C-T **
7105045-T-G 7237004-T-G **
7123463-C-T 7255422-C-T **
7157141-T-A 7289100-T-A **
7196299-C-A 7328258-C-A **
7335597-C-A 7467556-C-A **
7214542-C-A 7346501-C-A **
7235081-A-C 7367040-A-C **
7239322-A-G 7371281-A-G **
7239723-C-A 7371682-C-A **
7248647-T-A 7380606-T-A **
7253280-G-A 7385239-G-A **
7287857-T-C 7419816-T-C **
7311053-C-A 7443012-C-A **
7331368-T-G 7463327-T-G **
8353356-T-G 8485315-T-G Y86576 **
8706024-T-A 8837983-T-A **
7085194-C-A 7217153-C-A **
10677939-C-T **
9855928-C-A 10018319-C-A **
9885050-T-A 10047441-T-A **
9887039-T-G 10049430-T-G **
9926821-C-A 10089212-C-A **
9938293-T-C 10100684-T-C **
9940531-C-A 10102922-C-A **
10018055-A-C 10180446-A-C **
10661330-C-CCCATT **
10671898-A-G **
10688118-C-A **
9700775-C-A 9863166-C-A IR3_Prx **
10690165-T-G **
10744409-C-T **
10744430-A-C **
10750512-C-A **
10750575-C-A **
10764912-A-T **
10765646-G-T **
10781762-G-T **
10787158-C-A **
9751461-AAAAAAATC-A 9913852-AAAAAAATC-A **
9700764-G-A 9863155-G-A IR3_Prx **
8710103-C-A 8842062-C-A **
9116920-G-T 9279311-G-T **
8736282-C-A 8868241-C-A **
8776546-G-A 8908505-G-A **
8799600-T-C 8931559-T-C **
8842432-C-A 8974391-C-A **
8849671-C-A 8981630-C-A **
8856282-G-T 8988241-G-T **
8900959-A-T 9032918-A-T **
8981580-A-C 9143971-A-C **
9094574-C-G 9256965-C-G **
9117169-A-T 9279560-A-T **
9602684-C-G 9765075-C-G IR3_Prx **
9316738-T-G 9479129-T-G **
9316744-G-A 9479135-G-A **
9316748-AAG-A 9479139-AAG-A **
9354171-C-A 9516562-C-A **
9453933-T-C 9616324-T-C **
9465274-C-A 9627665-C-A **
9522562-C-A 9684953-C-A **
9524348-C-A 9686739-C-A **
9577120-T-C 9739511-T-C IR3_Prx **
9602683-A-T 9765074-A-T IR3_Prx **
7105007-T-C 7236966-T-C **
10879328-C-A **
7080944-A-T 7212903-A-T **
5890760-A-T 6022719-A-T **
5600942-C-A 5732901-C-A **
5645050-C-T 5777009-C-T **
5645104-C-T 5777063-C-T **
5822836-G-T 5954795-G-T **
5858538-A-C 5990497-A-C **
5859003-C-T 5990962-C-T **
5859037-C-T 5990996-C-T **
5927049-G-T 6059008-G-T **
5495580-T-C 5627539-T-C **
5966047-A-C 6098006-A-C **
6091977-G-T 6223936-G-T **
6149682-T-C 6281641-T-C IR3_Dst **
6352016-A-C 6483975-A-C **
6357797-C-T 6489756-C-T **
6457861-G-A 6589820-G-A FGC72361 **
6462436-G-A 6594395-G-A **
7052397-C-A 7184356-C-A **
5495418-A-G 5627377-A-G **
6467414-G-T 6599373-G-T **
5220537-T-G 5352496-T-G **
4952109-C-A 5084068-C-A **
4958306-C-T 5090265-C-T **
4959863-C-A 5091822-C-A **
4970045-G-T 5102004-G-T **
5073579-C-A 5205538-C-A **
5191321-C-T 5323280-C-T **
5220495-T-C 5352454-T-C **
5221122-C-A 5353081-C-A **
5421021-G-A 5552980-G-A **
5232589-C-A 5364548-C-A **
5241261-A-G 5373220-A-G **
5243394-C-A 5375353-C-A **
5264216-A-G 5396175-A-G **
5271821-A-G 5403780-A-G **
5292709-C-G 5424668-C-G **
5320785-C-A 5452744-C-A **
5335897-A-C 5467856-A-C **
6467390-TCC-T 6599349-TCC-T **
5586042-T-A 5718001-T-A **
6651363-C-A 6783322-C-A **
6878865-A-G 7010824-A-G **
6730180-AT-A 6862139-AT-A **
6998027-G-C 7129986-G-C **
6753366-A-T 6885325-A-T **
6753368-TA-T 6885327-TA-T **
7030007-A-C 7161966-A-C **
6715142-C-A 6847101-C-A **
6634223-G-C 6766182-G-C **
6621480-G-T 6753439-G-T **
6697278-C-A 6829237-C-A **
6576593-G-T 6708552-G-T **
6576627-A-T 6708586-A-T **
6919907-G-T 7051866-G-T **
10080392-G-T 10242783-G-T ***
9784749-T-A 9947140-T-A 11×A***
28801907-G-GC 26655760-G-GC ***
7769254-CT-C 7901213-CT-C 10×T***
23802444-A-T 21640558-A-T ***
13478393-C-A 11322717-C-A ***
14059583-C-A 11938877-C-A ***
23427133-CAA-C 21265247-CAA-C 12×A***
4063921-C-A 4195880-C-A ***
15932362-C-A 13820482-C-A ***
15276880-C-A 13164969-C-A ***
10937840-T-A ***
28801948-A-T 26655801-A-T ***
10937839-G-A ***
13859374-G-A 11738668-G-A ***
17680075-A-T 15568195-A-T ***
6983589-CTGTG-C,CTG 7115548-CTGTG-C,CTG 20×TG***
10937829-T-C ***
8843536-ATTTTT-A 8975495-ATTTTT-A 23×T***
9937274-T-C 10099665-T-C ***
22221015-G-T 20059129-G-T DYZ19 ***
10937827-T-C ***
22368026-T-A 20206140-T-A DYZ19 ***
22436112-G-T 20274226-G-T DYZ19 ***
11001471-G-A ***
25095987-G-A 22949840-G-A g1 ***
25310525-G-T 23164378-G-T P2_r1 ***
26199115-G-A 24052968-G-A P1_Y1 ***
10918309-G-T ***
22269251-C-T 20107365-C-T DYZ19 ***
13483890-T-C 11328214-T-C ***
28792982-A-C 26646835-A-C ***
13489990-C-A 11334314-C-A ***
9961049-G-C 10123440-G-C ***
11001406-C-T ***
11013198-TATTCC-T ***
10016285-G-T 10178676-G-T ***
9961029-T-C 10123420-T-C ***
19990928-A-C 17879048-A-C P5_Prx ***
9983012-A-G 10145403-A-G ***
15685135-C-T 13573255-C-T ***
16520974-C-A 14409094-C-A ***
17441175-A-AAT 15329295-A-AAT 20×AT***
14283045-CAT-C 12162339-CAT-C ***
6878073-C-A 7010032-C-A 17×A***
10796106-C-A ***
9992513-A-G 10154904-A-G ***
13464360-A-AC 11308684-A-AC ***
8504198-T-TTG 8636157-T-TTG 19×TG***
14772676-A-T 12660745-A-T 21×T******
15901648-C-A 13789768-C-A ***
5976793-AGT-A 6108752-AGT-A 8×GT***
13483322-T-C 11327646-T-C ***
14772674-C-T 12660743-C-T ***
15276882-GAAA-G,GAAAAA 13164971-GAAA-G,GAAAAA 18×A***
10693925-ATTCCATTCAA-A,ATTCCATTCCG ***
13135416-T-A 10624902-T-A F18109 ***
13135411-A-G 10624897-A-G ***
10844625-C-G ***
3279629-C-T 3411588-C-T ***
14220516-C-A 12099810-C-A ***
16588668-T-TA 14476788-T-TA 10×A***
10844619-A-T ***
17488779-GCA-G 15376899-GCA-G 8×CA***
10693991-A-AATTCCATTCC ***
4408497-C-A 4540456-C-A ***
13135406-A-G 10624892-A-G ***
15309805-G-A 13197910-G-A ***
15156440-C-A 13044527-C-A ***
10746995-T-A ***
23544818-C-T 21382932-C-T ***
5967726-C-A 6099685-C-A ***
19183530-G-T 17071650-G-T ***
17170187-TTG-T 15058307-TTG-T ***
7134894-CAAA-C 7266853-CAAA-C 13×A***
11031335-C-A ***
11025065-C-T ***
14627347-C-A 12515415-C-A ***
16194776-ATT-A 14082896-ATT-A 13×T***
13485912-C-G 11330236-C-G ***
56835213-G-T ***
16943387-C-A 14831507-C-A ***
17911837-C-A 15799957-C-A ***
14742060-G-T 12630128-G-T ***
8649899-G-A 8781858-G-A ***
10796687-C-A ***
7311484-C-T 7443443-C-T ***
14594180-C-A 12482380-C-A ***
10796661-C-A ***
4769498-C-A 4901457-C-A ***
7409907-A-G 7541866-A-G ***
20063941-TAAAA-T,TAA 17952061-TAAAA-T,TAA P5_Gap 18×A***
19486891-C-T 17375011-C-T ***
14898429-A-T 12786495-A-T ***
14527002-C-A 12415203-C-A ***
13475797-C-A 11320121-C-A ***
17332750-C-A 15220870-C-A 22×A***
7765626-C-A 7897585-C-A ***
17673082-C-A 15561202-C-A ***
20804883-GTG-G,GTA 18642997-GTG-G,GTA P4_Gap ***
10786433-T-C ***
13304170-T-C 11148494-T-C ***
6368908-G-T 6500867-G-T ***
19486877-A-T 17374997-A-T ***
19536919-C-A 17425039-C-A ***
10796662-C-G ***
10796135-T-G ***
23535520-C-A 21373634-C-A ***
23206993-G-T 21045107-G-T ***
56835189-C-T ***
23076220-A-G 20914334-A-G ***
6786815-C-A 6918774-C-A ***
56835181-C-G ***
58980740-C-G 56834593-C-G ***
19216224-C-A 17104344-C-A ***
13940857-AAGAGAGAG-A,AAGAG 11820151-AAGAGAGAG-A,AAGAG 18×AG***
19268348-C-A 17156468-C-A ***
19183542-G-A 17071662-G-A ***
15581110-G-T 13469230-G-T ***
10962875-C-A ***
3389014-C-A 3520973-C-A ***
6882679-CT-C 7014638-CT-C ***
14359926-A-G 12239221-A-G ***
56835191-C-A ***
56835205-A-T ***
8773858-CAAAA-C,CAAAAA 8905817-CAAAA-C,CAAAAA 16×A***
16506563-C-A 14394683-C-A ***
10958311-C-CTCCAT ***
14425992-TGCCACTGC-T 12305267-TGCCACTGC-T ***
22300732-T-C 20138846-T-C DYZ19 ***
14827255-GTT-G,GT 12715322-GTT-G,GT 14×T***
6732384-C-A 6864343-C-A ***
14916890-CAAA-C,CAAAA 12804957-CAAA-C,CAAAA 15×A***
13927559-C-A 11806853-C-A ***
2840088-G-A 2972047-G-A ***
22723371-T-C 20561485-T-C ***
22723379-T-C 20561493-T-C ***
14995720-A-C 12883805-A-C ***
14995726-G-A 12883811-G-A ***
22814056-C-A 20652170-C-A ***
14995734-C-T 12883819-C-T ***
7166634-A-T 7298593-A-T ***
13463714-C-G 11308038-C-G ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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