Tree Position

R-P312/S116 > Z290 > BY22760 > Y86814

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
329139
BigY2
329139
13837753-A-G 11717047-A-G Y89767 ++
17808988-T-C 15697108-T-C Y100292 YY++
14727302-G-A 12615370-G-A **
15115277-T-A 13003364-T-A **
15143736-A-G 13031823-A-G **
15161138-A-G 13049224-A-G **
15177431-A-G 13065517-A-G **
15205914-C-A 13094000-C-A **
15220903-C-A 13108989-C-A **
15230577-C-A 13118663-C-A **
15232192-C-A 13120278-C-A **
15234005-T-G 13122091-T-G **
15239056-G-A 13127142-G-A **
15070589-T-C 12958680-T-C **
15270884-A-C 13158973-A-C **
15270906-G-T 13158995-G-T **
15336630-T-G 13224748-T-G **
15341940-G-C 13230059-G-C **
15342777-A-T 13230896-A-T **
15368785-C-A 13256905-C-A **
15386345-C-A 13274465-C-A **
15386621-C-A 13274741-C-A **
15388462-C-A 13276582-C-A **
15398990-G-T 13287110-G-T **
15423830-A-G 13311950-A-G **
15113702-C-A 13001789-C-A **
14977348-C-A 12865423-C-A **
14986649-T-G 12874717-T-G **
14568233-C-A 12456433-C-A **
14428297-G-T 12307572-G-T **
14429360-C-T 12308635-C-T **
14447035-G-T 12326308-G-T **
14470357-A-T 12349626-A-T **
14479695-C-A 12358964-C-A **
12371664-C-A **
14507645-C-A 12395850-C-A **
14509439-G-A 12397644-G-A **
14520738-T-C 12408939-T-C **
14550222-T-A 12438423-T-A **
14589444-C-G 12477644-C-G **
15435130-G-C 13323250-G-C **
14589891-G-T 12478091-G-T **
14607248-G-T 12495450-G-T **
14691488-C-A 12579554-C-A **
14691802-A-T 12579868-A-T **
14695423-A-G 12583489-A-G **
14715394-G-A 12603461-G-A **
14735376-C-A 12623444-C-A **
14803100-C-A 12691171-C-A **
14824210-A-C 12712277-A-C **
14948878-T-A 12836952-T-A **
15430696-C-A 13318816-C-A **
15476326-C-A 13364446-C-A **
15456798-C-A 13344918-C-A **
16490713-G-T 14378833-G-T **
16211074-C-A 14099194-C-A **
16241434-T-G 14129554-T-G **
16272667-A-T 14160787-A-T **
16272813-G-T 14160933-G-T **
16279426-T-G 14167546-T-G **
16279438-A-C 14167558-A-C **
16319357-C-A 14207477-C-A **
16336065-G-T 14224185-G-T **
16430442-C-T 14318562-C-T **
16430444-T-C 14318564-T-C **
16539559-C-A 14427679-C-A **
16146483-GAA-G 14034603-GAA-G P8_Dst **
16656146-C-A 14544266-C-A **
16656665-T-G 14544785-T-G **
16704385-G-A 14592505-G-A **
16719595-T-G 14607715-T-G **
16719598-A-G 14607718-A-G **
16733715-A-G 14621835-A-G **
16739557-C-A 14627677-C-A **
16971228-C-T 14859348-C-T **
16994030-G-T 14882150-G-T **
17043010-G-A 14931130-G-A **
16146487-GAA-G 14034607-GAA-G P8_Dst **
16117491-T-C 14005611-T-C P8_Prx **
14421412-T-C 12300687-T-C **
15928596-C-T 13816716-C-T **
15612330-G-T 13500450-G-T **
15622292-C-T 13510412-C-T **
15643991-C-A 13532111-C-A **
15685135-C-A 13573255-C-A **
15761884-T-C 13650004-T-C **
15777103-T-G 13665223-T-G **
15882059-A-T 13770179-A-T **
15905035-C-A 13793155-C-A **
15912068-T-C 13800188-T-C **
15912141-C-A 13800261-C-A **
15939230-A-C 13827350-A-C **
16108674-GCTCTAAGAACGTCATTGGAAAGTTTTTCTTTCTTTTCTTTTCTTTTCTTTTCTT-G 13996794-GCTCTAAGAACGTCATTGGAAAGTTTTTCTTTCTTTTCTTTTCTTTTCTTTTCTT-G P8_Prx **
15941538-C-A 13829658-C-A **
15971543-T-A 13859663-T-A **
15971549-T-C 13859669-T-C **
15974981-C-A 13863101-C-A **
16001682-G-T 13889802-G-T **
16001737-G-T 13889857-G-T **
16001811-C-G 13889931-C-G **
16048139-G-A 13936259-G-A **
16057240-C-G 13945360-C-G **
16075367-C-A 13963487-C-A **
14421414-G-GA 12300689-G-GA **
14390090-C-A 12269386-C-A **
14392968-C-A 12272264-C-A **
13271693-C-G 11116017-C-G **
11026335-C-G **
11031564-A-G **
11034987-G-T **
13201985-A-G 11046309-A-G **
13227937-G-A 11072261-G-A **
13227967-C-G 11072291-C-G **
13227971-T-A 11072295-T-A **
13253263-G-A 11097587-G-A **
13253519-C-A 11097843-C-A **
13255983-C-A 11100307-C-A **
13273767-A-C 11118091-A-C **
11022434-A-C **
13273824-A-G 11118148-A-G **
13322479-C-T 11166803-C-T **
13340965-C-A 11185289-C-A **
13402852-G-T 11247176-G-T **
13409273-G-C 11253597-G-C **
13509799-A-G 11354123-A-G **
13509802-GA-G 11354126-GA-G **
13513623-G-A 11357947-G-A **
13596963-C-A 11441287-C-A **
13605706-T-G 11450030-T-G **
11022439-A-C **
11020665-G-T **
13643438-A-C 11487762-A-C **
10947900-C-G **
10921675-C-T **
10925943-A-C **
10925959-T-C **
10925964-T-C **
10925969-T-G **
10925973-C-G **
10925997-T-G **
10926003-TTCCGC-T **
10929752-C-T **
10935757-T-A **
10949715-C-A **
11019420-A-C **
10953722-C-A **
10961086-C-A **
10971711-C-A **
10972912-C-A **
10977634-C-A **
10981193-C-A **
10997466-G-T **
11008814-A-T **
11016338-A-G **
8154161-C-T 8286120-C-T **
13605714-C-A 11450038-C-A **
11644068-C-A **
17092511-A-T 14980631-A-T **
14220063-G-C 12099357-G-C **
13973252-C-T 11852546-C-T **
13990043-C-A 11869337-C-A **
13999981-C-G 11879275-C-G **
14017686-C-A 11896980-C-A Y90035 **
14031888-C-A 11911182-C-A **
14067870-T-C 11947164-T-C **
14195133-A-G 12074427-A-G **
14195134-C-T 12074428-C-T **
14195140-C-T 12074434-C-T **
14195149-G-A 12074443-G-A **
14245184-C-A 12124478-C-A **
13962071-GA-T 11841365-GA-T **
14250389-G-T 12129683-G-T **
14263396-AG-A 12142690-AG-A **
14283672-A-C 12162966-A-C **
14283703-G-C 12162997-G-C **
14295182-AGAGTCTCACTCTGTCACCCAGGCTG-A 12174476-AGAGTCTCACTCTGTCACCCAGGCTG-A **
14352879-C-A 12232174-C-A **
14373701-G-C 12252997-G-C **
14373716-T-C 12253012-T-C **
14373723-G-A 12253019-G-A **
14380703-C-A 12259999-C-A **
13972559-G-T 11851853-G-T **
13960587-G-GGATT 11839881-G-GGATT **
11645143-C-A **
11649618-A-C **
11646379-C-A **
11648324-G-A **
11648429-G-A **
11649552-C-G **
11649560-A-G **
11649565-A-C **
11649567-C-G **
11649570-A-G **
11649577-GCA-G **
11649581-TGCA-T **
11649632-G-A **
13959944-G-T 11839238-G-T **
11650593-A-T **
11654194-C-A **
11658677-G-T **
11676974-A-T **
13859813-C-G 11739107-C-G **
13860924-G-T 11740218-G-T **
13915734-C-A 11795028-C-A **
13925665-G-T 11804959-G-T **
13937508-G-T 11816802-G-T **
13940028-G-T 11819322-G-T **
17074637-G-T 14962757-G-T 34×T**
17123074-C-A 15011194-C-A **
17093824-C-A 14981944-C-A **
23079177-T-C 20917291-T-C **
22965616-G-A 20803730-G-A **
22991712-T-C 20829826-T-C **
22993516-C-A 20831630-C-A **
22997434-T-A 20835548-T-A **
23039519-T-G 20877633-T-G **
23058633-T-C 20896747-T-C **
23059685-C-T 20897799-C-T **
23065072-C-A 20903186-C-A **
23065118-T-G 20903232-T-G **
23138757-A-G 20976871-A-G **
22935352-C-A 20773466-C-A **
23205378-C-A 21043492-C-A **
23205889-C-A 21044003-C-A **
23208106-C-A 21046220-C-A **
23241981-T-A 21080095-T-A **
23306485-T-G 21144599-T-G **
23311435-T-G 21149549-T-G **
23319763-A-G 21157877-A-G **
23358236-A-C 21196350-A-C **
23372089-C-A 21210203-C-A **
23399793-C-A 21237907-C-A Y111456 **
22951264-AT-A 20789378-AT-A **
22904234-C-T 20742348-C-T **
23412004-G-C 21250118-G-C **
22527121-A-T 20365235-A-T **
21503272-A-G 19341386-A-G **
21714760-A-ACC 19552874-A-ACC **
21815161-T-A 19653275-T-A **
21833229-T-A 19671343-T-A **
21902260-C-A 19740374-C-A **
21979900-G-A 19818014-G-A **
22008428-C-A 19846542-C-A **
22032575-T-A 19870689-T-A **
22044050-C-A 19882164-C-A **
22340050-T-G 20178164-T-G DYZ19 **
22563030-G-C 20401144-G-C **
22853569-G-T 20691683-G-T **
22613912-G-T 20452026-G-T **
22623110-C-A 20461224-C-A **
22623201-T-C 20461315-T-C **
22641725-G-T 20479839-G-T **
22734393-T-G 20572507-T-G **
22752442-C-A 20590556-C-A **
22798003-A-G 20636117-A-G **
22808890-G-T 20647004-G-T **
22841485-A-G 20679599-A-G **
22843721-T-C 20681835-T-C **
23411423-C-A 21249537-C-A **
23697886-G-T 21536000-G-T **
21488636-A-T 19326750-A-T **
28742003-T-G 26595856-T-G **
28581171-C-A 26435024-C-A **
28583021-A-G 26436874-A-G **
28624521-C-T 26478374-C-T **
28632820-C-A 26486673-C-A **
28660780-G-A 26514633-G-A **
28660790-C-G 26514643-C-G **
28683946-G-T 26537799-G-T **
28720216-C-A 26574069-C-A **
28722116-C-A 26575969-C-A **
28731921-T-G 26585774-T-G **
28763371-C-A 26617224-C-A **
28549865-A-T 26403718-A-T **
28776687-T-A 26630540-T-A **
28776742-G-C 26630595-G-C **
28782126-C-T 26635979-C-T **
28782155-C-A 26636008-C-A **
56839708-G-T **
56843388-T-G **
56846256-CTGATCACCCAGG-C **
56879315-G-A **
56879317-C-A **
56879327-C-A **
28561783-T-C 26415636-T-C **
28537591-T-A 26391444-T-A **
23773429-G-T 21611543-G-T **
25728035-C-A 23581888-C-A P1_b3 **
23790422-A-G 21628536-A-G **
23810688-G-T 21648802-G-T **
23824977-T-A 21663091-T-A **
24002983-T-C 21856836-T-C **
24252245-A-G 22106098-A-G P3_b1 **
24280427-T-TG 22134280-T-TG P3_t1 **
24403556-C-A 22257409-C-A **
24491670-C-A 22345523-C-A **
24502978-G-A 22356831-G-A **
24671174-A-G 22525027-A-G P3_b2 **
25858139-AAAAAAATCAC-A 23711992-AAAAAAATCAC-A P1_Y1 **
28484906-A-C 26338759-A-C **
25874304-C-T 23728157-C-T P1_Y1 **
26003909-T-G 23857762-T-G P1_Y1 **
26046008-T-C 23899861-T-C P1_Y1 **
26133080-G-T 23986933-G-T P1_Y1 **
26153912-C-A 24007765-C-A P1_Y1 **
26478028-T-G 24331881-T-G P1_Y1 **
27127793-T-G 24981646-T-G P1_g3 **
27719828-G-T 25573681-G-T P1_Y2 **
28229307-T-G 26083160-T-G P1_b4 **
28429409-C-A 26283262-C-A P1_gr2 **
21491031-G-T 19329145-G-T **
21462603-T-C 19300717-T-C **
10911475-C-A **
18019202-C-A 15907322-C-A **
17633697-A-G 15521817-A-G **
17672179-T-C 15560299-T-C **
17717082-C-A 15605202-C-A **
17722642-C-A 15610762-C-A **
17782559-G-A 15670679-G-A **
17792282-C-T 15680402-C-T **
17798987-A-G 15687107-A-G **
17860778-G-T 15748898-G-T **
18003198-A-T 15891318-A-T P7_Gap **
18007472-T-G 15895592-T-G P7_Gap **
18053746-G-T 15941866-G-T **
17602366-C-A 15490486-C-A **
18053777-G-T 15941897-G-T **
18185982-C-G 16074102-C-G **
18188264-C-A 16076384-C-A **
18190150-G-C 16078270-G-C **
18191998-G-T 16080118-G-T **
18206545-C-A 16094665-C-A **
18261728-G-T 16149848-G-T **
18283677-C-A 16171797-C-A P6_Prx **
18454920-T-A 16343040-T-A P6_Dst **
18529116-A-T 16417236-A-T P6_Dst **
17605012-C-A 15493132-C-A **
17596542-T-TC 15484662-T-TC **
18702220-G-T 16590340-G-T **
17330252-T-C 15218372-T-C **
17196310-C-A 15084430-C-A **
17217473-C-A 15105593-C-A **
17226460-A-G 15114580-A-G **
17255205-C-A 15143325-C-A **
17276083-C-A 15164203-C-A **
17280056-A-T 15168176-A-T **
17285119-C-A 15173239-C-A **
17297032-C-G 15185152-C-G **
17297404-C-A 15185524-C-A **
17301124-A-C 15189244-A-C **
17330283-C-T 15218403-C-T **
17575524-C-A 15463644-C-A **
17397247-C-A 15285367-C-A **
17402321-C-A 15290441-C-A **
17406894-T-C 15295014-T-C **
17470705-C-A 15358825-C-A **
17500482-A-T 15388602-A-T **
17505046-C-A 15393166-C-A **
17505061-T-C 15393181-T-C **
17545842-C-A 15433962-C-A **
17567710-C-A 15455830-C-A FGC47990 **
17569032-C-A 15457152-C-A **
18539055-C-A 16427175-C-A **
18708040-T-G 16596160-T-G **
21302408-C-A 19140522-C-A **
21072277-T-C 18910391-T-C **
19853736-A-T 17741856-A-T P5_Prx **
19853785-A-C 17741905-A-C P5_Prx **
19873522-G-A 17761642-G-A P5_Prx **
20125609-C-T 18013729-C-T P5_Dst **
20352405-G-T 18190519-G-T P5_Dst **
20645756-G-T 18483870-G-T P4_Prx **
20650575-T-G 18488689-T-G P4_Prx **
20654953-T-A 18493067-T-A P4_Prx **
20872239-T-TA 18710353-T-TA P4_Dst **
21009139-T-TTTACGTAAG 18847253-T-TTTACGTAAG P4_Dst **
21072985-C-A 18911099-C-A **
19844904-G-T 17733024-G-T P5_Prx **
21084504-C-G 18922618-C-G **
21088764-C-A 18926878-C-A **
21116780-C-A 18954894-C-A **
21116965-CCTGGATAATGAAATTAT-C 18955079-CCTGGATAATGAAATTAT-C **
21155207-G-T 18993321-G-T **
21174568-A-T 19012682-A-T **
21175610-C-A 19013724-C-A **
21185102-A-G 19023216-A-G **
21248642-G-C 19086756-G-C **
21250900-C-T 19089014-C-T **
19853729-T-A 17741849-T-A P5_Prx **
19527877-T-C 17415997-T-C **
18712877-A-C 16600997-A-C **
18978883-G-A 16867003-G-A **
18736633-G-A 16624753-G-A **
18742279-C-A 16630399-C-A **
18779498-A-G 16667618-A-G **
18795811-A-G 16683931-A-G **
18855417-TG-T 16743537-TG-T **
18862072-C-A 16750192-C-A **
18905428-T-G 16793548-T-G **
18905454-A-G 16793574-A-G **
18905488-T-G 16793608-T-G **
18925392-C-A 16813512-C-A **
19009227-C-A 16897347-C-A **
19444866-C-A 17332986-C-A **
19048087-A-C 16936207-A-C **
19112647-G-T 17000767-G-T **
19129204-C-A 17017324-C-A **
19131486-A-T 17019606-A-T **
19143216-C-A 17031336-C-A **
19183884-A-T 17072004-A-T **
19202863-C-A 17090983-C-A **
19280712-C-A 17168832-C-A **
19403939-C-A 17292059-C-A **
19416448-C-A 17304568-C-A **
10917089-C-A **
11016428-C-T **
10911341-T-G **
3831378-T-C 3963337-T-C **
3539707-G-T 3671666-G-T **
3560083-T-A 3692042-T-A **
3590874-A-G 3722833-A-G **
3605999-A-G 3737958-A-G **
3626409-A-G 3758368-A-G **
3721286-G-A 3853245-G-A **
3748272-G-T 3880231-G-T **
3795015-A-G 3926974-A-G **
3797717-T-C 3929676-T-C **
3834087-C-A 3966046-C-A **
3432691-A-C 3564650-A-C **
3834610-C-G 3966569-C-G **
3836402-C-A 3968361-C-A **
3849478-T-A 3981437-T-A **
3851698-T-A 3983657-T-A **
3955754-C-A 4087713-C-A **
3961042-G-A 4093001-G-A **
3961061-A-G 4093020-A-G **
3969425-C-A 4101384-C-A **
3990623-A-C 4122582-A-C **
4070225-A-C 4202184-A-C **
3522686-A-T 3654645-A-T **
3410526-T-G 3542485-T-G **
4133346-C-A 4265305-C-A **
2936889-C-A 3068848-C-A **
2744789-T-C 2876748-T-C **
2824449-G-A 2956408-G-A **
2876770-T-C 3008729-T-C **
2892695-C-T 3024654-C-T **
2899603-T-C 3031562-T-C **
2915511-C-A 3047470-C-A **
2926726-C-A 3058685-C-A **
2926808-C-A 3058767-C-A **
2926828-A-G 3058787-A-G **
2964907-A-T 3096866-A-T **
3276025-T-A 3407984-T-A **
3043313-T-C 3175272-T-C **
3051455-A-G 3183414-A-G **
3078444-C-A 3210403-C-A **
3098639-G-T 3230598-G-T **
3098698-G-T 3230657-G-T **
3116157-T-A 3248116-T-A **
3116442-C-A 3248401-C-A **
3130538-T-C 3262497-T-C **
3191724-AAGG-A 3323683-AAGG-A **
3215666-G-T 3347625-G-T **
4094958-C-G 4226917-C-G **
4148963-A-G 4280922-A-G **
18972659-C-A 16860779-C-A **
5636295-C-A 5768254-C-A **
5216832-T-C 5348791-T-C **
5220457-C-A 5352416-C-A **
5317545-G-T 5449504-G-T **
5318832-C-T 5450791-C-T **
5325562-G-T 5457521-G-T **
5367769-G-T 5499728-G-T **
5461569-C-A 5593528-C-A **
5492106-G-T 5624065-G-T **
5536972-C-A 5668931-C-A **
5663747-T-C 5795706-T-C **
5212528-C-G 5344487-C-G **
5663796-C-A 5795755-C-A **
5761356-CAA-C 5893315-CAA-C 10×A**
5785833-A-T 5917792-A-T **
5804196-C-A 5936155-C-A **
5869689-C-A 6001648-C-A **
5893549-T-C 6025508-T-C **
5894889-C-A 6026848-C-A **
5928681-G-T 6060640-G-T **
5928714-G-T 6060673-G-T **
5980913-C-A 6112872-C-A **
5212642-C-G 5344601-C-G **
5188758-T-G 5320717-T-G **
4149893-G-T 4281852-G-T **
4486670-G-T 4618629-G-T **
4170541-C-A 4302500-C-A **
4178086-A-G 4310045-A-G **
4225976-A-G 4357935-A-G **
4229217-G-T 4361176-G-T **
4248060-T-C 4380019-T-C **
4248108-T-C 4380067-T-C **
4302808-C-T 4434767-C-T **
4442571-T-A 4574530-T-A **
4466405-A-T 4598364-A-T **
4474593-G-T 4606552-G-T **
4674896-C-A 4806855-C-A **
10902524-G-A **
4722971-G-T 4854930-G-T **
4730755-C-A 4862714-C-A **
4761895-A-T 4893854-A-T 9×T**
4770641-G-T 4902600-G-T **
4889327-G-C 5021286-G-C **
4973302-G-T 5105261-G-T **
5022025-AGG-C 5153984-AGG-C **
5054973-T-G 5186932-T-G **
5055102-TC-T 5187061-TC-T **
5186919-A-G 5318878-A-G **
2649749-G-T 2781708-G-T **
14488630-C-A 12367899-C-A **
5998942-G-A 6130901-G-A **
10688183-T-A **
5845354-G-T 5977313-G-T **
4898141-C-A 5030100-C-A **
10979388-C-A **
10688265-C-A **
10688277-T-A **
14000554-C-A 11879848-C-A **
5480489-A-AT 5612448-A-AT 11×T**
5264222-G-T 5396181-G-T **
16719588-A-C 14607708-A-C **
56851160-G-T **
18924929-C-A 16813049-C-A **
23459645-G-T 21297759-G-T **
10969838-C-A **
18223998-C-A 16112118-C-A **
2854770-A-T 2986729-A-T **
18855425-A-G 16743545-A-G **
2915123-C-A 3047082-C-A **
14639187-C-A 12527256-C-A **
28545385-C-A 26399238-C-A **
6772187-C-A 6904146-C-A **
17122208-C-A 15010328-C-A **
28658522-C-A 26512375-C-A **
4951718-C-A 5083677-C-A **
24235423-AT-A 22089276-AT-A P3_b1 **
7098924-T-A 7230883-T-A **
13222432-A-G 11066756-A-G **
14986650-CGG-C 12874718-CGG-C **
3261310-G-T 3393269-G-T **
15161291-TGAA-T 13049377-TGAA-T **
24321967-T-C 22175820-T-C P3_t1 **
13845116-C-A 11724410-C-A **
23807578-C-CAA 21645692-C-CAA 21×A**
21443528-C-A 19281642-C-A **
10823715-A-T **
26100543-TTGGTG-T 23954396-TTGGTG-T P1_Y1 **
13198692-C-A 11043016-C-A **
14507653-C-A 12395858-C-A **
19271586-T-G 17159706-T-G **
10889571-T-C **
10989131-C-T **
10989141-C-T **
19206562-C-A 17094682-C-A **
2970411-A-T 3102370-A-T **
14429375-C-A 12308650-C-A **
56847160-A-G **
7775033-C-A 7906992-C-A **
6359639-C-A 6491598-C-A **
13433299-C-A 11277623-C-A **
2810392-GAC-G 2942351-GAC-G **
21752319-G-T **
16507146-A-T 14395266-A-T **
17505627-C-A 15393747-C-A **
3697081-G-T 3829040-G-T **
18733485-C-A 16621605-C-A **
19479768-C-A 17367888-C-A Y43062 **
6231177-T-A 6363136-T-A IR3_Dst **
19271581-C-G 17159701-C-G **
10757275-G-A **
11675767-C-A **
10033952-C-A 10196343-C-A **
23741956-C-A 21580070-C-A **
6582498-C-A 6714457-C-A **
16921418-T-A 14809538-T-A **
18194361-C-A 16082481-C-A **
6359770-C-A 6491729-C-A **
28229308-C-T 26083161-C-T P1_b4 **
8159633-C-A 8291592-C-A **
56847138-T-A **
13479712-C-A 11324036-C-A **
7221341-C-A 7353300-C-A **
16659015-C-A 14547135-C-A **
2839979-C-A 2971938-C-A **
11037758-C-A **
23516454-C-A 21354568-C-A **
5957016-C-A 6088975-C-A **
10767891-C-A **
6244214-T-G 6376173-T-G IR3_Dst **
2839899-C-A 2971858-C-A **
10688249-C-A **
10688251-A-C **
13602637-C-A 11446961-C-A **
21775185-G-T 19613299-G-T Y107459 **
7098926-G-A 7230885-G-A **
28648618-C-A 26502471-C-A **
16104377-T-TC 13992497-T-TC P8_Prx **
10767875-C-T **
10767902-A-T **
21526867-C-A 19364981-C-A **
10767926-C-A **
10767935-C-T **
10767938-T-C **
6771702-C-A 6903661-C-A **
13507086-C-A 11351410-C-A **
6757010-C-A 6888969-C-A **
8854232-C-A 8986191-C-A **
23339493-C-A 21177607-C-A **
22076248-C-A 19914362-C-A **
6682106-C-A 6814065-C-A **
5985964-G-T 6117923-G-T **
5187061-C-A 5319020-C-A **
6012947-A-G 6144906-A-G **
10050684-C-A 10213075-C-A **
6092066-C-G 6224025-C-G **
9965025-C-A 10127416-C-A **
9965520-G-T 10127911-G-T **
9965615-G-T 10128006-G-T **
9991898-C-A 10154289-C-A **
9994900-C-A 10157291-C-A **
9997268-C-A 10159659-C-A **
10026304-T-G 10188695-T-G **
10054552-C-G 10216943-C-G **
9928080-T-G 10090471-T-G **
10651750-C-A **
10652231-C-A **
10657485-C-A **
10659377-C-A **
10671779-TTCCAC-T **
10677679-G-T **
10678453-T-TTCCAC **
10678473-A-C **
10685983-C-A **
9928084-T-G 10090475-T-G **
9843181-T-G 10005572-T-G **
10693466-T-A **
8854204-C-A 8986163-C-A **
8345181-G-C 8477140-G-C **
8568465-GTTTTTTT-G 8700424-GTTTTTTT-G 22×T**
8673896-C-A 8805855-C-A **
8705909-A-T 8837868-A-T **
8705925-A-G 8837884-A-G **
8705931-G-A 8837890-G-A **
8848502-C-A 8980461-C-A **
8848528-C-A 8980487-C-A **
8856950-C-A 8988909-C-A **
9764272-C-A 9926663-C-A **
9113651-G-T **
9127343-G-T **
8987562-A-T 9149953-A-T **
9039663-T-C 9202054-T-C **
9046872-T-G 9209263-T-G **
9522624-T-G 9685015-T-G **
9567490-A-AC 9729881-A-AC IR3_Prx **
9577142-C-A 9739533-C-A IR3_Prx **
9700777-TC-T 9863168-TC-T IR3_Prx **
10688275-C-T **
10746993-C-CAGTTG **
8345160-A-G 8477119-A-G **
10862183-T-C **
10823714-C-T **
10823736-T-C **
10824737-C-G **
10835578-A-C **
10837848-T-C **
10838054-A-G **
10847003-C-A **
10860889-G-T **
10862281-A-T **
10823697-A-C **
10869816-T-C **
10870382-T-C **
10870410-T-C **
10875929-T-C **
10876995-C-A **
10877425-A-C **
10879317-C-A **
10879762-CATTCCA-C **
10892764-G-T **
10823704-C-T **
10815214-A-G **
10747626-C-G **
10772201-C-A **
10747737-T-C **
10749923-T-A **
10751749-T-A **
10757345-ACCTCC-A **
10757374-G-A **
10757392-C-CACCAT **
10767799-T-C **
10768435-G-T **
10772342-A-T **
10813890-G-T **
10772541-C-A **
10774120-C-T **
10787258-C-A **
10787918-A-C **
10793706-C-A **
10798809-T-C **
10801794-A-T **
10801795-T-C **
10812330-C-A **
8345163-G-A 8477122-G-A **
9952489-C-A 10114880-C-A **
25144-T-G **
6752040-A-C 6883999-A-C **
6929384-G-T 7061343-G-T **
6925660-C-A 7057619-C-A **
6922484-C-T 7054443-C-T **
6918573-T-C 7050532-T-C **
6773349-C-A 6905308-C-A **
6772194-T-A 6904153-T-A **
7102511-A-T 7234470-A-T **
7402057-A-G 7534016-A-G **
7383607-T-A 7515566-T-A **
7409775-C-A 7541734-C-A **
6728927-G-T 6860886-G-T **
6683632-A-T 6815591-A-T **
7475250-T-A 7607209-T-A IR1_L **
7656958-T-G 7788917-T-G **
6644829-C-A 6776788-C-A **
6642458-C-A 6774417-C-A **
7385884-T-C 7517843-T-C **
7377708-C-A 7509667-C-A **
7708966-C-A 7840925-C-A **
7217279-C-A 7349238-C-A **
7139300-A-C 7271259-A-C **
7179781-G-C 7311740-G-C **
7184849-G-T 7316808-G-T **
7208581-A-T 7340540-A-T **
7052978-C-A 7184937-C-A **
7052946-C-G 7184905-C-G **
7217225-C-A 7349184-C-A **
7252271-T-G 7384230-T-G **
7359156-G-A 7491115-G-A **
7021883-T-C 7153842-T-C **
7252403-C-A 7384362-C-A **
6982411-C-A 7114370-C-A **
6930033-G-A 7061992-G-A **
7269865-C-A 7401824-C-A **
7294536-G-T 7426495-G-T **
7299097-A-G 7431056-A-G **
7314267-C-A 7446226-C-A **
6619675-T-G 6751634-T-G **
7108640-G-T 7240599-G-T **
6614748-G-T 6746707-G-T **
8075777-C-A 8207736-C-A **
8343812-C-A 8475771-C-A **
8341775-T-C 8473734-T-C **
6144918-T-G 6276877-T-G IR3_Dst **
8170291-C-A 8302250-C-A **
8167162-G-T 8299121-G-T **
8159657-G-T 8291616-G-T **
6241126-C-T 6373085-C-T IR3_Dst **
8135618-C-A 8267577-C-A **
8130660-C-A 8262619-C-A **
7894653-A-C 8026612-A-C **
8085323-C-A 8217282-C-A **
8077281-C-A 8209240-C-A **
8077232-C-A 8209191-C-A **
6332315-T-C 6464274-T-C IR3_Dst **
6244196-T-G 6376155-T-G IR3_Dst **
7964509-T-C 8096468-T-C **
8070004-G-T 8201963-G-T **
7897172-T-A 8029131-T-A **
6368367-T-G 6500326-T-G **
8052342-T-G 8184301-T-G **
23550095-C-A 21388209-C-A ***
15482669-C-A 13370789-C-A ***
14986700-G-C 12874768-G-C ***
7033685-C-A 7165644-C-A ***
10785020-G-T ***
10783235-C-T ***
13236363-T-C 11080687-T-C ***
23484536-G-T 21322650-G-T ***
13804062-T-G 11683356-T-G ***
7000387-T-C 7132346-T-C ***
23459537-T-G 21297651-T-G ***
10781157-C-A ***
22239892-G-A 20078006-G-A DYZ19 ***
22450823-C-G 20288937-C-G DYZ19 ***
24079029-T-C 21932882-T-C P3_b1 ***
8571150-CAAA-C,CAA 8703109-CAAA-C,CAA 14×A***
25176098-C-T 23029951-C-T g1 ***
16278742-T-C 14166862-T-C ***
56884401-G-A ***
21438465-C-A 19276579-C-A ***
56847235-A-C ***
56847236-G-A ***
13652999-A-C 11497323-A-C ***
13481943-G-A 11326267-G-A ***
11004783-C-A ***
16704965-A-G 14593085-A-G ***
16710384-C-A 14598504-C-A ***
25995050-TATATACAC-T,TATACAC 23848903-TATATACAC-T,TATACAC P1_Y1 ***
16711337-C-A 14599457-C-A ***
10834089-T-C,G ***
13457700-C-T 11302024-C-T ***
56838066-G-CTA ***
56838115-G-T ***
10985689-C-A ***
16505929-AAG-A 14394049-AAG-A ***
23205017-C-A 21043131-C-A ***
28766437-CAAAAAA-C 26620290-CAAAAAA-C 17×A***
10880289-C-A ***
24509460-T-C 22363313-T-C ***
10925433-C-A ***
6957840-C-A 7089799-C-A ***
24434576-G-A 22288429-G-A ***
24430235-A-T 22284088-A-T ***
10845604-C-A ***
14464165-ATTTTT-A,ATTTT 12343438-ATTTTT-A,ATTTT 18×T***
4862524-A-G 4994483-A-G ***
8026732-C-A 8158691-C-A ***
10012727-C-A 10175118-C-A ***
22634772-C-A 20472886-C-A ***
4136586-C-A 4268545-C-A Y31896 ***
7705720-C-A 7837679-C-A ***
21653917-C-A 19492031-C-A ***
21091054-CA-C,CAAA 18929168-CA-C,CAAA 16×A***
14844669-C-A 12732735-C-A ***
9927188-C-A 10089579-C-A ***
9874954-C-A 10037345-C-A ***
9873307-AG-A 10035698-AG-A ***
9873304-G-A 10035695-G-A ***
14751666-G-T 12639735-G-T ***
17961000-T-C 15849120-T-C ***
14190217-G-T 12069511-G-T ***
2767691-C-A 2899650-C-A ***
10012733-C-A 10175124-C-A ***
9422916-A-G 9585307-A-G ***
19446091-C-A 17334211-C-A ***
18094229-G-T 15982349-G-T ***
19409443-C-A 17297563-C-A ***
19330263-A-G 17218383-A-G ***
8857056-A-G 8989015-A-G ***
14319463-A-G 12198757-A-G ***
14552164-G-A 12440365-G-A ***
3688700-C-A 3820659-C-A ***
8786843-C-A 8918802-C-A ***
3641180-T-A 3773139-T-A ***
18946973-G-T 16835093-G-T ***
8286690-G-A 8418649-G-A ***
3407764-A-G 3539723-A-G ***
21316776-T-C 19154890-T-C ***
11657790-A-G ***
13489702-CG-C 11334026-CG-C ***
7255964-A-G 7387923-A-G ***
23184981-C-A 21023095-C-A ***
15342361-C-A 13230480-C-A ***
17301066-C-A 15189186-C-A ***
8078624-G-T 8210583-G-T ***
4687672-A-G 4819631-A-G ***
23044088-C-A 20882202-C-A ***
16030015-C-A 13918135-C-A ***
18883250-C-T 16771370-C-T ***
3409565-C-A 3541524-C-A ***
10911780-C-A ***
17375699-C-A 15263819-C-A ***
21153536-G-T 18991650-G-T ***
10755391-CATCTCTGTTT-C,CTGCTCTGTTT ***
10685522-C-A ***
7269632-TGC-GC,T 7401591-TGC-GC,T ***
11657787-A-G ***
21905283-CAAAAAA-C 19743397-CAAAAAA-C 16×A***
11657775-A-T ***
21653902-C-A 19492016-C-A ***
18627956-C-A 16516076-C-A ***
11657774-G-A ***
11657764-T-A ***
11657762-A-G ***
11657758-C-G ***
17416871-C-A 15304991-C-A ***
11657755-G-A ***
11657747-C-G ***
10019911-C-A 10182302-C-A ***
22721561-GC-G 20559675-GC-G ***
10660218-G-T ***
22786919-C-A 20625033-C-A ***
10689078-C-T ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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