Tree Position

A0-T-YP2191 > P305 > L413/PF1409/V31 > M168/PF1416 > P143 > M89/PF2746 > F1329/M3658 > F929 > L15/M523/S137 > M9 > F549 > Exact position not yet finalized.

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
unk-NO
28808606-A-C 26662459-A-C ***
26328502-A-G 24182355-A-G P1_Y1 ***
27339702-G-T 25193555-G-T P1_g3 +
14692442-A-G 12580508-A-G YY+
17193767-TAC-T 15081887-TAC-T 13×AC+
22462706-C-A 20300820-C-A DYZ19 +
25134571-G-A 22988424-G-A BY2345 g1 +
22480319-AG-A 20318433-AG-A DYZ19 +
22521682-T-C 20359796-T-C Y+
18639900-A-G 16528020-A-G YY+
15471506-AAAT-A 13359626-AAAT-A +
15024809-T-G 12912897-T-G YY+
25060613-G-A 22914466-G-A g1 +
25120071-G-A 22973924-G-A g1 +
14370576-A-T 12249872-A-T YY+
24651465-A-G 22505318-A-G P3_b2 +
23612891-T-TC 21451005-T-TC 8×C+
8452192-CA-C 8584151-CA-C 15×A***
58983110-G-T 56836963-G-T ***
24456472-T-TCA 22310325-T-TCA 14×CA***
13489178-C-T 11333502-C-T ***
22455775-G-A 20293889-G-A DYZ19 **
13526112-G-A 11370436-G-A **
20292463-GTGTGTGTGTGTA-G 18130577-GTGTGTGTGTGTA-G P5_Dst **
13462295-G-C 11306619-G-C ***
13865959-T-G 11745253-T-G **
13433831-C-G 11278155-C-G **
13445879-C-T 11290203-C-T **
21012190-ATGTGTGTGTG-A 18850304-ATGTGTGTGTG-A P4_Dst 20×TG**
19500593-G-GAGAAAGAA 17388713-G-GAGAAAGAA 15×AGAA**
25150164-A-ACT 23004017-A-ACT g1 **
25916896-C-T 23770749-C-T P1_Y1 **
22505048-T-C 20343162-T-C DYZ19 **
13722929-AACGGAATTGAATGTC-A 11567253-AACGGAATTGAATGTC-A ***
13822074-G-GA 11701368-G-GA 6×ATGGA***
13801029-GATAGT-G,GAAAGG 11680323-GATAGT-G,GAAAGG ***
13810047-T-A 11689341-T-A ***
13745383-T-C 11589707-T-C ***
15558499-T-TAGACAGAC 13446619-T-TAGACAGAC 5×AGAC***
26328264-C-G 24182117-C-G P1_Y1 ***
28784680-G-C 26638533-G-C ***
22454912-G-T 20293026-G-T DYZ19 ***
19358849-TTCTA-T 17246969-TTCTA-T 10×TCTA***
9961666-C-T 10124057-C-T ***
58977555-C-CTTTT 56831408-C-CTTTT ***
58977554-T-TC 56831407-T-TC ***
13857588-A-C 11736882-A-C ***
13466015-G-C 11310339-G-C ***
22477279-A-G 20315393-A-G DYZ19 ***
10020564-AACC-A 10182955-AACC-A ***
18235683-C-CA 16123803-C-CA 12×A***
10020595-G-A 10182986-G-A ***
13839031-GA-G 11718325-GA-G ***
58979706-A-G 56833559-A-G ***
58979685-C-A 56833538-C-A ***
10039873-G-T 10202264-G-T ***
13838156-A-AGAATGGAATG 11717450-A-AGAATGGAATG 11×GAATG***
10039872-A-G 10202263-A-G ***
13839034-T-C 11718328-T-C ***
13846467-A-C 11725761-A-C ***
28798995-G-T 26652848-G-T ***
58978593-T-A 56832446-T-A ***
13457924-T-A 11302248-T-A ***
13457922-A-G 11302246-A-G ***
13465982-G-A 11310306-G-A ***
58979727-CTCCAT-C 56833580-CTCCAT-C ***
22479449-T-C 20317563-T-C DYZ19 ***
22479439-C-G 20317553-C-G DYZ19 ***
13847977-G-T 11727271-G-T ***
13452873-GCATTCCATTC-G 11297197-GCATTCCATTC-G 14×CATTC***
14102359-T-TTCTATCTATCTA 11981653-T-TTCTATCTATCTA 9×TCTA***
9982303-C-T 10144694-C-T ***
22457637-A-G 20295751-A-G YFS033285 ZS3169 DYZ19 ***
22366557-G-T 20204671-G-T DYZ19 ***
10018690-A-AAGGCG 10181081-A-AAGGCG ***
13513140-TCCA-T 11357464-TCCA-T ***
22919325-G-GT 20757439-G-GT 20×T***
9191152-C-G 9353543-C-G ***
58983065-T-A 56836918-T-A ***
16315096-CA-C 14203216-CA-C 12×A***
8486934-CA-C 8618893-CA-C 12×A***
58977716-C-T 56831569-C-T ***
13135929-A-C 10625415-A-C ***
13857589-T-A 11736883-T-A ***
13135897-T-C 10625383-T-C ***
22476690-C-T 20314804-C-T DYZ19 ***
58975853-C-G 56829706-C-G ***
58977248-C-CCATTG 56831101-C-CCATTG ***
58979701-T-A 56833554-T-A A11606 ***
28795061-G-T 26648914-G-T ***
13839046-G-T 11718340-G-T ***
9936393-GAC-G 10098784-GAC-G ***
22433507-C-G 20271621-C-G DYZ19 ***
28784675-G-A 26638528-G-A ***
22293355-G-C 20131469-G-C DYZ19 ***
13810173-A-C 11689467-A-C ***
22266551-A-T 20104665-A-T DYZ19 ***
58981258-C-T 56835111-C-T ***
13694432-G-T 11538756-G-T ***
58985574-C-A 56839427-C-A ***
13861502-T-A 11740796-T-A ***
8644503-ATATATC-A 8776462-ATATATC-A 6×TATATC***
13135951-A-G 10625437-A-G ***
13857971-T-A,G 11737265-T-A,G ***
28800270-A-C 26654123-A-C ***
10034855-G-A 10197246-G-A ***
13135902-T-C 10625388-T-C ***
13135914-T-G 10625400-T-G ***
28801669-A-T 26655522-A-T ***
28801660-T-C 26655513-T-C ***
13135956-AG-A 10625442-AG-A ***
24347788-C-T 22201641-C-T P3_t1 ***
13857562-AATGGAAT-A 11736856-AATGGAAT-A ***
22288235-G-A 20126349-G-A DYZ19 ***
22283487-G-C 20121601-G-C DYZ19 ***
22429568-A-G 20267682-A-G DYZ19 ***
22366554-C-G 20204668-C-G DYZ19 ***
22339277-G-C 20177391-G-C DYZ19 ***
22327027-C-T 20165141-C-T DYZ19 ***
22321704-G-C 20159818-G-C DYZ19 ***
22301330-G-T 20139444-G-T DYZ19 ***
22284087-G-T 20122201-G-T DYZ19 ***
22279810-C-A 20117924-C-A DYZ19 ***
22451291-C-T 20289405-C-T DYZ19 ***
22276849-A-T 20114963-A-T DYZ19 ***
22276842-C-T 20114956-C-T DYZ19 ***
22275211-A-T 20113325-A-T DYZ19 ***
22275190-A-G 20113304-A-G DYZ19 ***
22272215-C-T 20110329-C-T DYZ19 ***
22257058-G-T 20095172-G-T DYZ19 ***
22249437-T-A 20087551-T-A DYZ19 ***
22245258-T-A 20083372-T-A DYZ19 ***
22446777-C-T 20284891-C-T DYZ19 ***
22453628-T-G 20291742-T-G DYZ19 ***
22218181-C-A 20056295-C-A DYZ19 ***
24077839-T-G 21931692-T-G P3_b1 ***
26099825-T-C 23953678-T-C P1_Y1 ***
25733450-T-C 23587303-T-C P1_b3 ***
25412766-G-GT 23266619-G-GT P2_r2 ***
25347244-A-G 23201097-A-G P2_r1 ***
25288308-G-GA 23142161-G-GA P2_r1 ***
24726142-CCT-C 22579995-CCT-C P3_b2 ***
24250765-C-T 22104618-C-T P3_b1 ***
24233247-T-G 22087100-T-G P3_b1 ***
23663996-C-T 21502110-C-T ***
22455376-T-A 20293490-T-A DYZ19 ***
22510273-C-A 20348387-C-A DYZ19 ***
22489813-A-T 20327927-A-T DYZ19 ***
22476785-C-G 20314899-C-G DYZ19 ***
22471202-T-C 20309316-T-C DYZ19 ***
22461307-C-G 20299421-C-G DYZ19 ***
22459170-T-C 20297284-T-C DYZ19 ***
22457643-G-A 20295757-G-A DYZ19 ***
22457642-T-G 20295756-T-G DYZ19 ***
22223814-A-T 20061928-A-T DYZ19 ***
20767759-A-C 18605873-A-C P4_Prx ***
13720652-T-A 11564976-T-A ***
28800192-C-T 26654045-C-T ***
26099803-T-C 23953656-T-C P1_Y1 9×TC***
22476511-G-A 20314625-G-A DYZ19 ***
10019582-TTTTC-T,TTTT 10181973-TTTTC-T,TTTT ***
26179746-AAACAAC-A,AAAC 24033599-AAACAAC-A,AAAC P1_Y1 13×AAC***
13450585-ACTCCG-A,ACTCCA 11294909-ACTCCG-A,ACTCCA ***
13472672-G-T 11316996-G-T ***
28800189-G-A 26654042-G-A ***
58981257-G-A,T 56835110-G-A,T ***
13866215-G-A 11745509-G-A ***
6090764-A-AT 6222723-A-AT 11×T***
13141172-CCGTTG-C 10630658-CCGTTG-C ***
22509970-C-T 20348084-C-T DYZ19 ***
13839059-T-A 11718353-T-A ***
13706529-A-G 11550853-A-G ***
58979670-G-A 56833523-G-A ***
22250184-T-A 20088298-T-A A3962 DYZ19 ***
22240119-G-T 20078233-G-T DYZ19 ***
22231030-C-A 20069144-C-A DYZ19 ***
22284611-A-G 20122725-A-G DYZ19 ***
22429778-A-T 20267892-A-T DYZ19 ***
20105742-TTATCTATCTATCTATC-T,TTATC 17993862-TTATCTATCTATCTATC-T,TTATC P5_Dst 14×TATC***
13319489-C-CAGAG 11163813-C-CAGAG 8×AG***
19372284-TGATAGATAGATA-T 17260404-TGATAGATAGATA-T 11×GATA***
18380958-C-T 16269078-C-T P6_Prx ***
18272075-G-A 16160195-G-A P6_Prx ***
14468995-AT-A,AA 12348264-AT-A,AA ***
13867502-A-AAATGGAATGG 11746796-A-AAATGGAATGG 10×AATGG***
13702412-G-C 11546736-G-C ***
13455687-T-C 11300011-T-C ***
13452333-ATTCCATTCCA-A,ATTCCATTCCG 11296657-ATTCCATTCCA-A,ATTCCATTCCG ***
9312661-C-A 9475052-C-A ***
22477565-C-T 20315679-C-T DYZ19 ***
9215655-G-C 9378046-G-C ***
9207621-A-G 9370012-A-G ***
9188703-A-C 9351094-A-C ***
7488768-G-A 7620727-G-A IR1_L ***
6953202-TACACAC-T 7085161-TACACAC-T 17×AC***
6173222-G-A 6305181-G-A IR3_Dst ***
2903232-CTCCTTCCTTCCTTCCTTCCT-C 3035191-CTCCTTCCTTCCTTCCTTCCT-C 18×TCCT***
28807269-T-C 26661122-T-C ***
9341121-G-A 9503512-G-A ***
9958199-T-C 10120590-T-C ***
22284790-A-G 20122904-A-G DYZ19 ***
21226300-CT-C 19064414-CT-C 13×T***
22242465-C-T 20080579-C-T DYZ19 ***
13869302-G-A 11748596-G-A ***
13859884-G-A 11739178-G-A ***
16478359-CA-C 14366479-CA-C 18×A***
14101717-CA-C 11981011-CA-C 15×A***
13868770-A-G,T 11748064-A-G,T ***
13463918-A-C 11308242-A-C ***
28800186-A-G 26654039-A-G ***
7310271-CT-C 7442230-CT-C 13×T***
58975855-A-C 56829708-A-C ***
58973861-A-G 56827714-A-G ***
13866109-G-C,T 11745403-G-C,T ***
13858326-A-G 11737620-A-G ***
13843384-A-G 11722678-A-G ***
13833686-A-G 11712980-A-G ***
13829509-T-C 11708803-T-C ***
13464488-C-A 11308812-C-A ***
13138769-G-T 10628255-G-T ***
10008403-C-T 10170794-C-T ***
22276020-A-T 20114134-A-T A4013 DYZ19 ***
9983962-TC-T 10146353-TC-T ***
13861584-G-A 11740878-G-A ***
13138140-T-C 10627626-T-C ***
13843402-T-A 11722696-T-A ***
13839078-G-A 11718372-G-A ***
13809928-T-G 11689222-T-G ***
13727038-C-T 11571362-C-T ***
13466970-A-T 11311294-A-T ***
13463166-G-A 11307490-G-A ***
13450452-T-A 11294776-T-A ***
13450447-T-A 11294771-T-A ***
13138130-T-C 10627616-T-C ***
9983964-A-T 10146355-A-T ***
9961680-G-C 10124071-G-C ***
58983127-C-G 56836980-C-G ***
10009156-AG-A 10171547-AG-A ***
10009149-G-A 10171540-G-A ***
22510424-C-A 20348538-C-A DYZ19 ***
13851066-C-T 11730360-C-T ***
13462694-T-A 11307018-T-A ***
58981274-C-T 56835127-C-T ***
10020710-C-A 10183101-C-A ***
13861590-A-G 11740884-A-G ***
13861578-G-C 11740872-G-C ***
13867426-C-T 11746720-C-T ***
13448831-T-C 11293155-T-C ***
22296218-G-T 20134332-G-T DYZ19 ***
13869803-G-A 11749097-G-A ***
13802936-T-A 11682230-T-A ***
13720877-C-A 11565201-C-A ***
13488043-A-G 11332367-A-G ***
13487968-A-T 11332292-A-T ***
13464524-C-T 11308848-C-T ***
13453283-T-C 11297607-T-C ***
9202501-CT-C 9364892-CT-C 12×T***
13446669-A-C 11290993-A-C ***
7783780-GA-G 7915739-GA-G 12×A***
6758025-CA-C 6889984-CA-C 12×A***
23196176-G-GT 21034290-G-GT 20×T***
22484013-T-C 20322127-T-C DYZ19 ***
13869277-G-A 11748571-G-A ***
13676723-A-G 11521047-A-G ***
13664440-T-A 11508764-T-A ***
13489634-C-A 11333958-C-A ***
13478505-T-A 11322829-T-A ***
22368952-C-T 20207066-C-T DYZ19 ***
13463837-G-A 11308161-G-A ***
13861543-A-C 11740837-A-C ***
58980707-C-T 56834560-C-T ***
13676720-A-AAACC 11521044-A-AAACC ***
13488561-G-A 11332885-G-A ***
9984536-G-C 10146927-G-C ***
58972340-A-C 56826193-A-C ***
13461817-C-T 11306141-C-T ***
10035651-T-A 10198042-T-A ***
13868068-A-G 11747362-A-G ***
13722291-A-T 11566615-A-T ***
9984567-G-A 10146958-G-A ***
22487767-G-C 20325881-G-C DYZ19 ***
13693654-G-A 11537978-G-A ***
13839260-A-G 11718554-A-G ***
13718576-C-G 11562900-C-G ***
13718574-A-T 11562898-A-T ***
13138000-C-T 10627486-C-T ***
25567335-GA-G 23421188-GA-G P1_gr1 12×A***
22727125-G-GA 20565239-G-GA 11×A***
22457419-G-C 20295533-G-C DYZ19 ***
13868063-A-T 11747357-A-T ***
13868061-G-A 11747355-G-A ***
13851160-A-T 11730454-A-T ***
28796715-TG-T 26650568-TG-T ***
20793453-A-AAT 18631567-A-AAT P4_Prx 12×AT***
58979523-T-C 56833376-T-C ***
13488569-C-T 11332893-C-T ***
10020867-GTC-G 10183258-GTC-G ***
22270306-G-C 20108420-G-C DYZ19 ***
13593743-G-T 11438067-G-T ***
13485856-G-A,T 11330180-G-A,T ***
13466491-G-T 11310815-G-T ***
15956866-CT-C 13844986-CT-C 15×T***
28798856-G-A 26652709-G-A ***
13861474-A-C,G 11740768-A-C,G ***
13679906-T-C 11524230-T-C ***
58980828-AC-A 56834681-AC-A ***
13478033-G-A 11322357-G-A ***
58972204-A-T 56826057-A-T ***
22446678-C-G 20284792-C-G DYZ19 ***
13481958-A-G 11326282-A-G ***
13435138-C-G 11279462-C-G ***
10035610-A-G 10198001-A-G ***
10035609-G-A 10198000-G-A ***
10035601-A-G 10197992-A-G ***
22236188-T-A 20074302-T-A DYZ19 ***
13861514-C-G 11740808-C-G ***
58982638-C-A 56836491-C-A ***
21430333-TA-T 19268447-TA-T 10×A***
13453430-A-C 11297754-A-C ***
58977535-C-CCTTTCCACTT 56831388-C-CCTTTCCACTT ***
22365118-G-A 20203232-G-A DYZ19 ***
13866223-T-C 11745517-T-C ***
9984599-C-T 10146990-C-T ***
22454938-G-C 20293052-G-C DYZ19 ***
13861504-G-C 11740798-G-C ***
8702810-G-T 8834769-G-T 21×T***
22218003-C-T 20056117-C-T DYZ19 ***
58977557-G-A,GTTTCA 56831410-G-A,GTTTCA ***
13857596-G-A 11736890-G-A ***
13486812-C-G 11331136-C-G ***
13138391-ACCATTCCATT-A 10627877-ACCATTCCATT-A 8×CCATT***
28801684-A-G 26655537-A-G ***
13706344-A-C 11550668-A-C ***
22476767-G-T 20314881-G-T DYZ19 ***
13846459-C-G 11725753-C-G ***
3131457-A-ATCTCT 3263416-A-ATCTCT DF63/S522 14×TCTCT***
13861486-G-A,T 11740780-G-A,T ***
13835255-T-A 11714549-T-A ***
10035584-G-A 10197975-G-A ***
58981499-A-T 56835352-A-T ***
28812877-G-T 26666730-G-T ***
58973814-C-T 56827667-C-T ***
18691838-CT-C 16579958-CT-C 14×T***
9961488-C-A 10123879-C-A ***
13861540-A-T 11740834-A-T ***
13861521-A-C 11740815-A-C ***
22509593-T-A 20347707-T-A DYZ19 ***
22508799-C-A 20346913-C-A DYZ19 ***
13451635-A-T 11295959-A-T ***
14602039-AT-A 12490241-AT-A 17×T***
13461726-A-G 11306050-A-G ***
13486822-C-A 11331146-C-A ***
28800197-GCATGT-G 26654050-GCATGT-G ***
13858494-T-C 11737788-T-C ***
13461771-A-T 11306095-A-T ***
13450733-T-C 11295057-T-C ***
10019328-T-A 10181719-T-A ***
7415624-T-TGATAGATAGATA 7547583-T-TGATAGATAGATA 10×GATA***
22281895-T-TG 20120009-T-TG DYZ19 ***
10036233-G-C 10198624-G-C ***
58976142-G-C,T 56829995-G-C,T ***
58976122-A-T 56829975-A-T ***
13486825-T-G 11331149-T-G ***
58981494-A-C 56835347-A-C ***
13828566-A-G 11707860-A-G ***
58981470-T-C 56835323-T-C ***
58973971-C-T 56827824-C-T ***
13866259-T-C 11745553-T-C ***
9961585-T-A 10123976-T-A ***
9961584-C-T 10123975-C-T ***
9420138-A-ATAT 9582529-A-ATAT 14×TAT***
58975395-C-T 56829248-C-T ***
22276338-C-T 20114452-C-T DYZ19 ***
22260055-G-A 20098169-G-A DYZ19 ***
13814595-A-AGGAAT 11693889-A-AGGAAT 10×GGAAT***
13135919-G-A 10625405-G-A ***
10035643-G-A 10198034-G-A ***
10035638-A-T 10198029-A-T ***
10035635-C-A 10198026-C-A ***
10035630-C-T 10198021-C-T ***
13846595-G-C 11725889-G-C ***
13828650-C-T 11707944-C-T ***
13488628-G-A 11332952-G-A ***
13513140-T-C 11357464-T-C ***
13135924-G-A 10625410-G-A ***
22266508-T-G 20104622-T-G DYZ19 ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: unk-NO1059182077146497796171
Used in age calculations1059182077146497796171
Counts of SNPs54
Variant counts last updated 2017-10-28 19:15:39.



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