Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > L1335/S530 > L1065 > Z16325 > S744 > S764 > ZZ28 > FGC18441 > FGC18447 > 16741294-C-T

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
194465
BigY2
194465
26163526-T-A 24017379-T-A P1_Y1 ***A*
6167609-G-A 6299568-G-A IR3_Dst ***A*
22307620-T-G 20145734-T-G DYZ19 ***A*
22419933-T-G 20258047-T-G DYZ19 ***+
15572924-A-G 13461044-A-G Y94170 YY++
23819884-C-T 21657998-C-T Y++
21359988-A-C 19198102-A-C YY++
17908575-A-T 15796695-A-T Y100612 YY++
22303279-C-T 20141393-C-T DYZ19 ****
14786335-A-G 12674405-A-G **
14798648-T-C 12686719-T-C **
14831873-C-A 12719940-C-A **
14831920-C-A 12719987-C-A **
14884665-CT-C 12772731-CT-C **
14911038-C-T 12799105-C-T **
14911044-C-A 12799111-C-A **
14926280-G-A 12814345-G-A **
30983-T-C **
14766749-C-A 12654818-C-A **
14965258-C-A 12853333-C-A **
14981767-T-A 12869843-T-A **
14981772-C-G 12869848-C-G **
14986385-G-A 12874453-G-A **
14986396-G-A 12874464-G-A **
14986397-C-T 12874465-C-T **
15012772-T-G 12900860-T-G **
15104970-G-A 12993058-G-A **
15109089-G-C 12997176-G-C **
15109159-T-C 12997246-T-C **
15115649-A-T 13003736-A-T **
15146319-A-T 13034406-A-T **
15158697-C-A 13046783-C-A **
14934330-C-A 12822395-C-A **
14701265-A-G 12589331-A-G **
14764358-C-A 12652427-C-A **
14557776-C-A 12445977-C-A **
14384284-C-G 12263580-C-G **
14392883-G-C 12272179-G-C **
14422308-T-C 12301583-T-C **
14428022-C-A 12307297-C-A **
14447437-C-A 12326710-C-A **
14456012-C-A 12335285-C-A **
14506950-A-T 12395155-A-T **
14521713-C-A 12409914-C-A **
14539168-T-C 12427369-T-C **
14555196-C-A 12443397-C-A **
14589317-C-A 12477517-C-A **
14743894-G-C 12631963-G-C **
14592153-C-A 12480353-C-A **
14592168-C-T 12480368-C-T **
14608109-C-T 12496311-C-T **
14620124-C-T 12508322-C-T **
14661612-A-T 12549677-A-T **
14686103-A-C 12574169-A-C **
14686146-A-C 12574212-A-C **
14693870-G-A 12581936-G-A **
15171258-C-T 13059344-C-T **
14743082-G-T 12631150-G-T **
15163367-G-T 13051453-G-T **
15498704-A-G 13386824-A-G **
15189648-C-A 13077734-C-A **
16450297-C-A 14338417-C-A **
16063473-C-A 13951593-C-A **
16064672-C-T 13952792-C-T **
16064678-A-G 13952798-A-G **
16218003-T-C 14106123-T-C **
16227989-A-G 14116109-A-G **
16273872-C-A 14161992-C-A **
16309496-C-T 14197616-C-T **
16309503-A-C 14197623-A-C **
16384842-C-A 14272962-C-A **
16412938-A-T 14301058-A-T **
16506056-C-A 14394176-C-A **
16041886-A-C 13930006-A-C **
16528184-C-A 14416304-C-A **
16624760-C-T 14512880-C-T **
16625903-G-T 14514023-G-T **
16654778-C-A 14542898-C-A **
16676087-T-G 14564207-T-G **
16676155-T-C 14564275-T-C **
16689781-A-C 14577901-A-C **
16702692-C-A 14590812-C-A **
16745208-C-T 14633328-C-T **
16765710-A-G 14653830-A-G **
16049035-A-G 13937155-A-G **
16000923-T-A 13889043-T-A **
15323650-T-G 13211768-T-G **
15649929-C-A 13538049-C-A **
15342849-C-A 13230968-C-A **
15380430-G-T 13268550-G-T **
15495361-C-A 13383481-C-A **
14357784-C-A 12237079-C-A **
15498705-A-C 13386825-A-C **
15498719-C-G 13386839-C-G **
15536521-C-CG 13424641-C-CG **
15556706-C-A 13444826-C-A **
15584503-C-A 13472623-C-A **
15641689-C-A 13529809-C-A **
15676819-C-G 13564939-C-G **
15967583-T-C 13855703-T-C **
15677804-G-T 13565924-G-T **
15710415-C-A 13598535-C-A **
15732160-A-G 13620280-A-G **
15749340-C-A 13637460-C-A **
15753276-C-A 13641396-C-A **
15860339-C-A 13748459-C-A **
15866709-C-A 13754829-C-A **
15911538-C-A 13799658-C-A **
15926810-G-A 13814930-G-A **
15967581-A-G 13855701-A-G **
14359862-C-T 12239157-C-T **
14250486-G-T 12129780-G-T **
14356552-C-A 12235847-C-A **
10983876-A-C **
10961410-C-CTACTG **
10963193-C-A **
10963629-C-A **
10973125-T-C **
10974785-C-A **
10974824-A-T **
10974833-C-G **
10976611-C-A **
10982618-T-A **
10987546-C-A **
10958905-T-A **
11004397-T-A **
11008679-G-T **
11009633-T-G **
11014080-C-A **
11015875-T-A **
11015880-T-C **
11015927-C-T **
11015942-C-A **
11016982-A-C **
11021399-C-T **
10961386-C-A **
10952343-T-C **
11021454-C-G **
10890092-A-C **
10872593-C-A **
10876214-TC-T **
10876285-G-T **
10876352-G-A **
10884987-C-A **
10886725-C-A **
10887517-A-T **
10889171-T-C **
10889184-A-C **
10889738-T-C **
10892041-C-T **
10950549-T-A **
22876964-T-TA 20715078-T-TA 20×A**
10895625-A-G **
10927741-C-A **
10928932-C-A **
10938723-C-T **
10939379-G-T **
10946136-T-C **
10950479-T-C **
10950513-A-T **
10950539-C-CTACAT **
11021416-C-G **
11022939-C-A **
14299836-A-C 12179130-A-C **
13910325-G-T 11789619-G-T **
11644247-G-A **
11644668-G-T **
11644727-G-T **
11650363-A-G **
11669689-C-A **
11671551-G-T **
13856019-C-A 11735313-C-A **
13878540-G-A 11757834-G-A **
13880208-A-T 11759502-A-T **
13909764-C-A 11789058-C-A **
13929287-C-A 11808581-C-A **
13721681-A-C 11566005-A-C **
13929334-A-G 11808628-A-G **
14076672-C-A 11955966-C-A **
14100250-A-G 11979544-A-G **
14124037-A-G 12003331-A-G **
14160183-T-A 12039477-T-A **
14184471-T-C 12063765-T-C **
14239298-C-A 12118592-C-A **
16778023-C-T 14666143-C-T **
14272930-G-T 12152224-G-T **
14283431-C-A 12162725-C-A **
13721686-A-G 11566010-A-G **
13631554-G-T 11475878-G-T **
11031270-C-A **
13335802-T-C 11180126-T-C **
13195831-C-A 11040155-C-A **
13199226-A-T 11043550-A-T **
13202442-C-A 11046766-C-A **
13213372-T-A 11057696-T-A **
13224477-C-A 11068801-C-A **
13224533-C-A 11068857-C-A **
13252587-C-T 11096911-C-T 12×T**
13258745-C-T 11103069-C-T **
13258764-C-T 11103088-C-T **
13315674-C-G 11159998-C-G **
13356687-C-A 11201011-C-A **
13592410-C-A 11436734-C-A **
13384497-C-A 11228821-C-A **
13402736-T-C 11247060-T-C **
13402769-G-T 11247093-G-T **
13446430-G-T 11290754-G-T **
13486684-G-T 11331008-G-T **
13490981-G-C 11335305-G-C **
13567054-C-A 11411378-C-A **
13573104-T-G 11417428-T-G **
13578011-G-T 11422335-G-T **
13588380-C-A 11432704-C-A **
16765712-GA-G 14653832-GA-G **
16919285-T-C 14807405-T-C **
16778037-C-G 14666157-C-G **
22876963-T-A 20715077-T-A **
22564873-T-G 20402987-T-G **
22615324-G-A 20453438-G-A **
22615347-G-A 20453461-G-A **
22639242-C-T 20477356-C-T **
22776948-T-A 20615062-T-A **
22810640-T-A 20648754-T-A **
22840045-G-T 20678159-G-T **
22876937-G-A 20715051-G-A **
22876953-T-A 20715067-T-A S24816 **
23056240-A-G 20894354-A-G **
22346868-T-G 20184982-T-G DYZ19 **
23096837-C-A 20934951-C-A **
23120082-C-A 20958196-C-A **
23145986-G-T 20984100-G-T **
23259342-A-G 21097456-A-G **
23304545-C-A 21142659-C-A **
23306116-C-A 21144230-C-A **
23315847-C-A 21153961-C-A **
23315916-C-T 21154030-C-T **
23321880-T-C 21159994-T-C **
23332263-A-G 21170377-A-G **
22346882-AG-T 20184996-AG-T DYZ19 **
22345997-C-TCG 20184111-C-TCG DYZ19 **
23491044-G-A 21329158-G-A **
21899745-A-T 19737859-A-T **
21221313-T-A 19059427-T-A **
21317717-G-A 19155831-G-A **
21320030-G-C 19158144-G-C **
21410233-C-A 19248347-C-A **
21426923-A-G 19265037-A-G **
21584056-T-G 19422170-T-G **
21709239-G-T 19547353-G-T **
21713493-C-A 19551607-C-A **
21836249-A-C 19674363-A-C **
21883565-C-A 19721679-C-A **
21915517-C-A 19753631-C-A **
22235193-A-C 20073307-A-C DYZ19 **
21924037-G-A 19762151-G-A **
21926552-C-G 19764666-C-G **
22027595-C-G 19865709-C-G **
22029981-A-G 19868095-A-G **
22048510-T-C 19886624-T-C **
22048531-A-C 19886645-A-C **
22205502-C-A 20043616-C-A **
22235169-C-G 20073283-C-G DYZ19 **
22235188-C-T 20073302-C-T DYZ19 **
22235189-C-T 20073303-C-T DYZ19 **
23450697-C-A 21288811-C-A **
23504981-A-G 21343095-A-G **
21154557-C-A 18992671-C-A **
28635108-A-T 26488961-A-T **
27829265-T-G 25683118-T-G P1_Y2 **
27994688-T-TAC 25848541-T-TAC P1_Y2 13×A**
28360494-A-AT 26214347-A-AT P1_gr2 **
28461609-A-T 26315462-A-T **
28492395-C-A 26346248-C-A **
28508348-G-C 26362201-G-C **
28511009-C-A 26364862-C-A **
28536960-G-A 26390813-G-A **
28543875-C-A 26397728-C-A **
28594249-C-T 26448102-C-T **
28720222-C-A 26574075-C-A **
27527359-G-T 25381212-G-T P1_Y2 **
28754421-A-C 26608274-A-C **
28763413-G-A 26617266-G-A Y113399 **
28772956-G-C 26626809-G-C **
28782126-C-A 26635979-C-A Y12394 **
28812510-G-T 26666363-G-T **
56840089-A-T **
56840115-A-C **
56858607-C-A **
56875374-C-A **
7050-T-G **
27762783-A-AAC 25616636-A-AAC P1_Y2 **
27456888-CT-C 25310741-CT-C P1_Y2 11×T**
23742499-C-A 21580613-C-A **
24607769-C-A 22461622-C-A P3_t2 **
23837504-G-T 21675618-G-T Y112412 **
24264583-A-C 22118436-A-C P3_b1 **
24353297-C-T 22207150-C-T P3_t1 **
24353301-C-CG 22207154-C-CG P3_t1 **
24359572-T-G 22213425-T-G **
24405011-G-C 22258864-G-C **
24405038-A-C 22258891-A-C **
24503048-G-T 22356901-G-T **
24509389-C-A 22363242-C-A **
24523530-G-C 22377383-G-C **
24633961-T-G 22487814-T-G P3_t2 **
27290658-G-A 25144511-G-A P1_g3 **
24751223-T-G 22605076-T-G P3_b2 **
25971091-G-C 23824944-G-C P1_Y1 **
25994027-A-C 23847880-A-C P1_Y1 **
26047380-C-A 23901233-C-A P1_Y1 **
26055577-T-C 23909430-T-C P1_Y1 **
26055582-G-A 23909435-G-A P1_Y1 **
26084835-T-A 23938688-T-A P1_Y1 **
26153805-A-T 24007658-A-T P1_Y1 **
26314857-G-T 24168710-G-T P1_Y1 **
26699275-T-A 24553128-T-A P1_g2 **
21184515-C-A 19022629-C-A **
21152397-G-T 18990511-G-T **
16778053-G-A 14666173-G-A **
18191309-C-A 16079429-C-A **
17781647-C-A 15669767-C-A **
17927373-C-T 15815493-C-T **
17929227-G-T 15817347-G-T **
18050596-T-C 15938716-T-C **
18089002-T-C 15977122-T-C **
18101873-C-A 15989993-C-A **
18101884-G-A 15990004-G-A **
18154332-C-A 16042452-C-A **
18165999-T-G 16054119-T-G **
18184820-G-T 16072940-G-T **
18195278-G-A 16083398-G-A **
17622755-C-CAAA 15510875-C-CAAA 11×A**
18197919-C-A 16086039-C-A **
18340472-G-A 16228592-G-A P6_Prx **
18388374-A-T 16276494-A-T P6_Gap **
18389238-C-G 16277358-C-G P6_Gap **
18422642-A-G 16310762-A-G P6_Gap **
18522335-G-A 16410455-G-A P6_Dst **
18605358-C-A 16493478-C-A **
18646010-G-A 16534130-G-A **
18687737-A-G 16575857-A-G **
18703806-A-C 16591926-A-C **
17730413-C-A 15618533-C-A **
17604999-C-A 15493119-C-A **
18717728-A-C 16605848-A-C **
17063693-A-G 14951813-A-G **
16786203-T-C 14674323-T-C **
16829312-G-T 14717432-G-T **
16868803-G-T 14756923-G-T **
10833450-C-A **
16942151-C-A 14830271-C-A **
16972147-G-A 14860267-G-A **
16972162-A-G 14860282-A-G **
16972179-T-G 14860299-T-G **
16981357-A-G 14869477-A-G **
17029268-C-A 14917388-C-A **
17128536-T-TA 15016656-T-TA **
17591764-G-A 15479884-G-A **
17191675-A-C 15079795-A-C **
17231440-C-A 15119560-C-A **
17355934-C-A 15244054-C-A **
17375298-G-T 15263418-G-T **
17385657-C-A 15273777-C-A **
17425141-C-A 15313261-C-A **
17426957-T-C 15315077-T-C **
17515416-C-G 15403536-C-G **
17568437-C-A 15456557-C-A **
17588595-G-T 15476715-G-T **
18704248-T-G 16592368-T-G **
18726695-T-C 16614815-T-C **
21136701-C-A 18974815-C-A **
19950520-A-G 17838640-A-G P5_Prx **
19438366-G-T 17326486-G-T **
19489303-T-A 17377423-T-A **
19547764-C-A 17435884-C-A **
19678827-T-G 17566947-T-G P5_Prx **
19719327-CAAAA-C 17607447-CAAAA-C P5_Prx 17×A**
19719350-T-G 17607470-T-G P5_Prx **
19733342-C-A 17621462-C-A P5_Prx **
19799791-C-A 17687911-C-A P5_Prx **
19904379-T-C 17792499-T-C P5_Prx **
19950507-T-A 17838627-T-A P5_Prx 15×A**
20250037-T-TC 18088151-T-TC P5_Dst **
19373849-C-A 17261969-C-A **
20306038-T-G 18144152-T-G P5_Dst **
20337574-T-G 18175688-T-G P5_Dst **
20350285-G-A 18188399-G-A P5_Dst **
20420977-A-G 18259091-A-G P5_Dst **
20570355-C-A 18408469-C-A P5_Dst **
20655044-G-A 18493158-G-A P4_Prx **
20681902-C-A 18520016-C-A P4_Prx **
20747192-T-C 18585306-T-C P4_Prx **
20875154-T-TC 18713268-T-TC P4_Dst **
20875167-T-A 18713281-T-A P4_Dst **
19418485-C-A 17306605-C-A **
19361262-G-C 17249382-G-C **
18731008-C-T 16619128-C-T **
19053253-C-A 16941373-C-A **
18738273-C-A 16626393-C-A **
18739513-T-G 16627633-T-G **
18756065-A-G 16644185-A-G **
18810777-C-A 16698897-C-A **
18816976-C-A 16705096-C-A **
18951236-C-A 16839356-C-A **
18993323-C-A 16881443-C-A **
19020121-A-G 16908241-A-G **
19041216-T-A 16929336-T-A **
19044638-C-A 16932758-C-A **
19056408-C-A 16944528-C-A **
19361248-T-A 17249368-T-A **
19127743-A-C 17015863-A-C **
19168820-A-G 17056940-A-G **
19183980-C-A 17072100-C-A **
19235618-C-A 17123738-C-A **
19244739-G-C 17132859-G-C **
19250173-T-C 17138293-T-C **
19274667-G-C 17162787-G-C **
19274705-G-T 17162825-G-T **
19324170-G-T 17212290-G-T **
19361240-C-G 17249360-C-G **
10851103-T-A **
10892911-A-C **
10824446-C-A **
4301878-T-C 4433837-T-C **
3850179-C-A 3982138-C-A **
3961711-A-G 4093670-A-G **
4002941-C-A 4134900-C-A **
4070012-A-G 4201971-A-G **
4080929-G-A 4212888-G-A **
4111084-G-T 4243043-G-T **
4153744-C-A 4285703-C-A **
4159008-G-T 4290967-G-T **
4174428-T-G 4306387-T-G **
4345714-G-A 4477673-G-A **
3758862-C-A 3890821-C-A **
4357447-A-G 4489406-A-G **
4394544-C-A 4526503-C-A **
4412948-G-T 4544907-G-T **
4444449-A-G 4576408-A-G **
4470376-A-C 4602335-A-C **
4477644-G-T 4609603-G-T **
4505422-T-A 4637381-T-A **
4561056-A-C 4693015-A-C **
4567099-A-G 4699058-A-G **
3795005-C-A 3926964-C-A **
3688947-C-A 3820906-C-A **
4567153-T-A 4699112-T-A **
3389781-A-G 3521740-A-G **
2996975-C-T 3128934-C-T **
3047591-T-C 3179550-T-C **
3047605-A-G 3179564-A-G **
3047621-T-A 3179580-T-A **
3065482-G-T 3197441-G-T **
3285189-A-C 3417148-A-C **
3285763-G-T 3417722-G-T **
3332144-T-A 3464103-T-A **
3332399-A-C 3464358-A-C **
3400767-G-T 3532726-G-T **
3640793-C-T 3772752-C-T **
3404034-C-A 3535993-C-A **
3436360-C-A 3568319-C-A **
3468417-G-T 3600376-G-T **
3506328-G-T 3638287-G-T **
3506365-C-T 3638324-C-T **
3513348-G-T 3645307-G-T **
3542262-T-C 3674221-T-C **
3545570-G-T 3677529-G-T **
3602765-C-A 3734724-C-A **
3629223-T-G 3761182-T-G **
4567149-G-A 4699108-G-A **
4687991-T-C 4819950-T-C **
2825242-T-A 2957201-T-A **
6238667-G-GCT 6370626-G-GCT IR3_Dst **
5845328-G-T 5977287-G-T **
5895162-C-A 6027121-C-A **
5977004-T-A 6108963-T-A **
6037876-A-G 6169835-A-G **
6037959-T-C 6169918-T-C **
6037982-T-C 6169941-T-C **
6043214-C-G 6175173-C-G **
6113688-C-A 6245647-C-A **
6130236-G-A 6262195-G-A **
6273798-A-G 6405757-A-G IR3_Dst **
5645114-T-A 5777073-T-A **
6295528-C-G 6427487-C-G IR3_Dst **
6339127-T-A 6471086-T-A IR3_Dst 10×CA**
6339128-CA-C 6471087-CA-C IR3_Dst **
6347598-T-A 6479557-T-A **
6365246-C-A 6497205-C-A **
6368440-C-A 6500399-C-A **
6375665-T-C 6507624-T-C **
6375690-T-A 6507649-T-A **
6375700-T-A 6507659-T-A **
6427044-C-A 6559003-C-A **
5819818-C-A 5951777-C-A **
5606657-A-G 5738616-A-G **
4695893-C-A 4827852-C-A **
4964417-G-T 5096376-G-T **
4703611-C-A 4835570-C-A **
4706981-T-C 4838940-T-C **
4707117-A-T 4839076-A-T **
4724446-G-T 4856405-G-T **
4749728-A-G 4881687-A-G **
4749750-A-G 4881709-A-G **
4786157-G-T 4918116-G-T **
4789028-T-A 4920987-T-A **
4962395-C-A 5094354-C-A **
5125682-C-A 5257641-C-A **
5505727-C-G 5637686-C-G **
5186742-C-T 5318701-C-T **
5243391-A-C 5375350-A-C **
5249078-C-A 5381037-C-A **
5249667-A-C 5381626-A-C **
5268351-A-C 5400310-A-C **
5268359-A-T 5400318-A-T **
5268426-T-C 5400385-T-C **
5268432-G-T 5400391-G-T **
5420563-C-A 5552522-C-A **
5426445-C-A 5558404-C-A **
2859118-C-G 2991077-C-G **
2810453-T-C 2942412-T-C **
6578244-C-A 6710203-C-A **
24607775-A-AC 22461628-A-AC P3_t2 **
22520778-G-A 20358892-G-A **
20440462-C-A 18278576-C-A P5_Dst **
14032612-C-A 11911906-C-A **
10692722-C-A **
6786697-C-A 6918656-C-A **
15323648-G-A 13211766-G-A **
9313805-C-A 9476196-C-A **
6646994-C-A 6778953-C-A **
10664698-C-T **
19361232-G-T 17249352-G-T **
20579333-A-G 18417447-A-G P5_Dst **
5200697-G-T 5332656-G-T **
23482888-C-A 21321002-C-A **
21012121-C-A 18850235-C-A P4_Dst **
10961418-T-G **
14506817-C-A 12395022-C-A **
9030112-G-T 9192503-G-T **
9566729-A-AG 9729120-A-AG IR3_Prx **
2729705-G-T 2861664-G-T **
5887724-C-A 6019683-C-A **
10678659-T-A **
20579320-A-C 18417434-A-C P5_Dst **
11019159-C-A **
22468305-A-T 20306419-A-T DYZ19 ****
7409787-C-A 7541746-C-A **
5213983-C-T 5345942-C-T **
9047671-C-A 9210062-C-A **
15429434-G-A 13317554-G-A CTS4148 ****
13486695-A-T 11331019-A-T **
19465813-C-A 17353933-C-A **
15497519-C-A 13385639-C-A **
6847842-G-A 6979801-G-A **
22281863-G-A 20119977-G-A DYZ19 ****
22485531-G-A 20323645-G-A DYZ19 *****
3079498-C-A 3211457-C-A **
10057939-A-G 10220330-A-G **
18340485-CACAT-C 16228605-CACAT-C P6_Prx **
4505392-C-T 4637351-C-T **
14788133-C-A 12676204-C-A **
19324215-C-A 17212335-C-A **
3274106-C-A 3406065-C-A **
13899480-C-A 11778774-C-A **
8913448-G-T 9045407-G-T **
28583283-C-A 26437136-C-A **
14440839-C-A 12320112-C-A **
16598973-C-A 14487093-C-A **
3346302-T-A 3478261-T-A **
2795550-G-C 2927509-G-C **
7223517-C-A 7355476-C-A **
23786899-C-A 21625013-C-A **
3849501-C-A 3981460-C-A **
14300772-C-A 12180066-C-A **
6130235-T-C 6262194-T-C **
10776081-AC-A **
3847318-C-A 3979277-C-A **
10824442-C-A **
19795146-A-AT 17683266-A-AT P5_Prx **
3853643-C-A 3985602-C-A **
11023059-C-A **
23459733-C-A 21297847-C-A **
19924662-T-TC 17812782-T-TC P5_Prx **
14292826-C-A 12172120-C-A **
10804917-C-T **
2683452-A-G 2815411-A-G **
2697389-C-A 2829348-C-A **
2701377-A-G 2833336-A-G **
2753814-C-A 2885773-C-A **
2767941-G-T 2899900-G-T **
2768048-G-T 2900007-G-T **
2788376-G-A 2920335-G-A **
13252579-C-T 11096903-C-T **
4124145-C-A 4256104-C-A **
4388668-G-T 4520627-G-T **
10930093-G-C **
5426325-C-A 5558284-C-A **
7163090-C-A 7295049-C-A **
21211965-C-A 19050079-C-A **
4240888-C-A 4372847-C-A **
16987881-C-A 14876001-C-A **
17871907-C-A 15760027-C-A **
13586024-C-A 11430348-C-A **
20434786-G-T 18272900-G-T P5_Dst **
14887918-C-A 12775984-C-A **
6644833-C-A 6776792-C-A **
19040778-G-T 16928898-G-T **
15556039-C-A 13444159-C-A **
8237387-A-C 8369346-A-C **
3625926-C-A 3757885-C-A **
6037997-C-A 6169956-C-A **
18253164-G-A 16141284-G-A **
9773502-C-A 9935893-C-A **
10691469-G-T **
14422264-C-A 12301539-C-A **
15201646-A-G 13089732-A-G **
7433497-C-A 7565456-C-A **
6461095-A-C 6593054-A-C **
5768238-G-T 5900197-G-T **
9221652-G-T 9384043-G-T **
9421277-T-A 9583668-T-A **
9015876-C-A 9178267-C-A **
9025507-T-G 9187898-T-G **
9034328-T-A 9196719-T-A Y88441 **
9144373-C-G 9306764-C-G **
6651280-G-T 6783239-G-T **
10780609-T-A **
9385082-C-A 9547473-C-A **
9398136-C-A 9560527-C-A **
9423041-T-A 9585432-T-A **
10792092-T-G **
9444879-C-A 9607270-C-A **
9498636-C-A 9661027-C-A **
10779302-C-A **
9508010-TTTTTTTA-T 9670401-TTTTTTTA-T **
9508440-C-T 9670831-C-T **
9509479-G-T 9671870-G-T **
9524253-G-T 9686644-G-T **
9562313-G-GGT 9724704-G-GGT IR3_Prx **
9625870-T-TGG 9788261-T-TGG IR3_Prx **
9107806-G-T **
8911603-C-A 9043562-C-A **
10777348-C-A **
10794285-A-ATACTT **
8237415-A-G 8369374-A-G **
8238382-C-A 8370341-C-A **
8269603-C-A 8401562-C-A **
8281797-G-A 8413756-G-A **
10754544-T-C **
8343029-C-A 8474988-C-A **
8379179-CT-C 8511138-CT-C **
8379183-CTTT-C 8511142-CTTT-C **
8379577-C-G 8511536-C-G 18×TG**
8851890-G-C 8983849-G-C **
8387663-A-G 8519622-A-G **
8694301-C-G 8826260-C-G **
8709929-T-C 8841888-T-C **
8733058-C-A 8865017-C-A **
10794243-C-A **
8776571-TA-T 8908530-TA-T **
8786810-C-A 8918769-C-A **
10793721-C-A **
8851887-C-T 8983846-C-T **
9625915-G-C 9788306-G-C IR3_Prx **
10767663-TTCCACTCCAC-T **
8237384-C-A 8369343-C-A **
10687360-G-T **
10678607-C-T **
10678618-C-CTCTCT **
10678631-T-A **
10678673-C-CAGTCT **
10683455-C-A **
10687345-T-C **
10754546-C-A **
10687351-T-C **
10687363-A-G **
10678570-C-CTTCAT **
10687374-A-T **
10687379-G-C **
10687383-A-C **
10687384-C-A **
10687390-G-T **
10687398-C-A **
10690802-C-A **
10745990-A-T **
10753647-T-TCCATAG **
10678606-C-A **
10673078-C-A **
10764609-C-T **
10664692-C-T **
9732881-G-A 9895272-G-A IR3_Prx **
9952382-T-G 10114773-T-G **
9959013-A-G 10121404-A-G **
10012854-T-G 10175245-T-G **
10015976-A-G 10178367-A-G **
10025356-T-C 10187747-T-C **
10655461-A-G **
10660839-C-T **
10665656-C-T **
10669284-A-G **
10665683-A-C **
10666998-C-CTAGT **
10667158-C-A **
10762629-C-A **
10761875-CACTCCACT-C **
10667196-C-A **
10754595-C-A **
10754550-A-C **
10754547-C-T **
8237389-A-C 8369348-A-C **
8321465-G-T 8453424-G-T 5×TTTA**
8216420-TTTG-T 8348379-TTTG-T **
7229184-C-A 7361143-C-A **
7132068-G-A 7264027-G-A **
10802482-A-C **
10801723-A-T **
7142208-C-T 7274167-C-T **
7152831-G-A 7284790-G-A **
7154855-G-A 7286814-G-A **
7214535-C-G 7346494-C-G **
7228249-G-T 7360208-G-T **
7235964-C-A 7367923-C-A **
10813069-C-A **
7240511-T-C 7372470-T-C **
7242670-C-A 7374629-C-A **
7269701-C-A 7401660-C-A **
10800140-C-T **
10801664-T-TGAC **
7301556-G-C 7433515-G-C **
7311803-A-T 7443762-A-T **
7311942-C-A 7443901-C-A **
7113159-C-A 7245118-C-A **
7102627-A-G 7234586-A-G **
7313593-C-A 7445552-C-A **
6948257-A-T 7080216-A-T **
6780737-G-A 6912696-G-A **
6793531-C-A 6925490-C-A **
6808039-C-A 6939998-C-A **
6825486-C-A 6957445-C-A **
6839629-CAGAGAG-C 6971588-CAGAGAG-C 10×AG**
6919807-C-A 7051766-C-A **
6919972-C-A 7051931-C-A **
6944038-C-T 7075997-C-T **
6992577-G-A 7124536-G-A **
7102576-T-G 7234535-T-G **
7018060-C-T 7150019-C-T **
10820413-C-A **
7018064-A-G 7150023-A-G **
10815497-C-A **
7030607-G-T 7162566-G-T **
7045747-C-A 7177706-C-A **
7058102-C-A 7190061-C-A **
7063806-G-T 7195765-G-T **
7313007-G-T 7444966-G-T **
7301537-T-A 7433496-T-A **
10753649-TG-T **
7873734-A-C 8005693-A-C **
7462618-G-T 7594577-G-T IR1_L **
7572848-C-A 7704807-C-A **
7717885-G-T 7849844-G-T **
7723592-C-G 7855551-C-G **
7869106-C-A 8001065-C-A **
7873693-C-A 8005652-C-A **
8045317-C-A 8177276-C-A **
7436298-G-A 7568257-G-A **
8058533-A-G 8190492-A-G **
8078375-T-A 8210334-T-A **
8078377-G-T 8210336-G-T **
8090856-G-T 8222815-G-T **
8094520-C-T 8226479-C-T **
8140626-C-A 8272585-C-A **
7436371-C-A 7568330-C-A **
7650601-T-C 7782560-T-C **
7420715-A-C 7552674-A-C **
7409727-C-A 7541686-C-A **
7319067-T-A 7451026-T-A **
7319093-C-A 7451052-C-A **
7319154-C-T 7451113-C-T **
7333999-C-A 7465958-C-A **
7338112-C-A 7470071-C-A **
7340887-C-T 7472846-C-T **
7418560-A-T 7550519-A-T **
10824198-A-T ***
22540050-C-CA 20378164-C-CA 10×A***
14148053-A-G 12027347-A-G FGC35929FGC35933 ***
56830343-C-T ***
10801000-C-A ***
10978758-C-A ***
58997066-C-G 56850919-C-G ***
10949620-T-C ***
18404593-GT-G 16292713-GT-G P6_Gap 10×T***
10910906-G-C ***
30938-A-T ***
14949133-C-A 12837207-C-A ***
10910907-T-A ***
16246150-G-T 14134270-G-T ***
30950-C-CAAGA ***
24874399-C-A 22728252-C-A g1 ***
22427380-G-A 20265494-G-A DYZ19 ***
10880377-CA-C ***
22240861-T-G 20078975-T-G DYZ19 ***
10914459-G-T ***
28529897-C-A 26383750-C-A ***
18628000-C-A 16516120-C-A ***
7138038-C-A 7269997-C-A ***
7783328-C-A 7915287-C-A ***
56835172-T-A ***
10922439-C-A ***
22425132-C-A 20263246-C-A DYZ19 ***
56836123-C-A ***
10801663-A-ACTCGGGT ***
10781273-C-A ***
22283967-T-A 20122081-T-A DYZ19 ***
13859824-C-T 11739118-C-T ***
7098901-GT-G 7230860-GT-G ***
22301303-A-C 20139417-A-C DYZ19 ***
13447314-TTCCACTCCACTCCAC-T,TTCCACTCCACTCCAT 11291638-TTCCACTCCACTCCAC-T,TTCCACTCCACTCCAT 8×TCCAC***
6592543-C-A 6724502-C-A ***
23827542-CA-C,CAA 21665656-CA-C,CAA 17×A***
7212569-C-A 7344528-C-A ***
7975874-CA-C 8107833-CA-C ***
4108119-C-A 4240078-C-A ***
7922435-G-T 8054394-G-T ***
14612784-C-G 12500982-C-G ***
14645590-C-A 12533654-C-A ***
4447356-C-A 4579315-C-A ***
17897939-T-A 15786059-T-A ***
17549702-C-A 15437822-C-A ***
17458378-C-A 15346498-C-A ***
4936881-C-A 5068840-C-A ***
17315046-C-A 15203166-C-A ***
16868612-C-A 14756732-C-A ***
8151443-A-ATG 8283402-A-ATG ***
15252999-C-A 13141085-C-A ***
7137044-C-A 7269003-C-A ***
10851075-T-C ***
5844929-C-A 5976888-C-A ***
16702239-C-A 14590359-C-A ***
7020472-C-A 7152431-C-A ***
15592921-C-A 13481041-C-A ***
16560063-C-A 14448183-C-A ***
16406853-ATTT-A,AT 14294973-ATTT-A,AT 20×T***
15761914-GTCTC-G 13650034-GTCTC-G ***
16202379-C-A 14090499-C-A ***
6776497-CAAAAA-C 6908456-CAAAAA-C 28×A***
18698656-C-A 16586776-C-A ***
14328466-C-A 12207760-C-A ***
10987858-C-G ***
9730756-A-G 9893147-A-G IR3_Prx ***
16045007-C-A 13933127-C-A ***
10995578-T-A ***
10668645-C-A ***
22209156-A-T 20047270-A-T ***
22185892-G-A,T 20024006-G-A,T ***
22133945-A-G 19972059-A-G ***
22028890-C-A 19867004-C-A A15844 ***
21996197-C-T 19834311-C-T ***
13226612-G-A 11070936-G-A ***
21515078-C-A 19353192-C-A ***
21491226-G-T 19329340-G-T ***
9666553-G-T 9828944-G-T IR3_Prx ***
9730755-C-T 9893146-C-T IR3_Prx ***
8379317-C-T 8511276-C-T ***
21285294-C-A 19123408-C-A ***
22812659-C-T 20650773-C-T ***
27692994-C-T 25546847-C-T P1_Y2 ***
2688869-C-A 2820828-C-A ***
11657137-C-T ***
2772556-C-A 2904515-C-A ***
13856814-C-A 11736108-C-A ***
2803897-C-A 2935856-C-A ***
2809540-A-ATT 2941499-A-ATT 18×T***
2861533-TCAAAAA-T 2993492-TCAAAAA-T ***
13992230-T-C 11871524-T-C ***
19172893-T-C 17061013-T-C ***
13664440-T-G 11508764-T-G ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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