Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > ZZ12 > ZZ19 > Z31644 > Z42772 > BY2285 > FGC22202 > A641 > Y5061

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
59497
FGC
D8FCK
20802742-T-C 18640856-T-C FGC31186 P4_Gap +
21348048-C-T 19186162-C-T M7044 Y+
6704534-A-G 6836493-A-G FGC22214 YY++
8719970-G-T 8851929-G-T FGC22215 YY++
10028851-A-T 10191242-A-T FGC22216 Y++
22954771-T-C 20792885-T-C FGC31187 YY+
15251999-G-A 13140085-G-A FGC22219 Y++
15252360-A-G 13140446-A-G FGC22220 Y++
16565471-T-C 14453591-T-C FGC22221 YY++
18071198-G-A 15959318-G-A FGC22222 YY++
18213674-G-C 16101794-G-C FGC22223 YY++
19154664-GA-G 17042784-GA-G ++
22477144-G-A 20315258-G-A FGC22228 DYZ19 +**
18946947-G-A 16835067-G-A L1065S739 AMM305 YY+
4389252-G-T 4521211-G-T FGC31184 ++
4027066-CTG-C 4159025-CTG-C +
5897775-G-C 6029734-G-C FGC31185 +
14255512-T-C 12134806-T-C FGC31180 Y+
10031292-A-C 10193683-A-C FGC31179 Y+
15987450-A-C 13875570-A-C FGC31175 YY*
5442371-A-C 5574330-A-C FGC31176 *
3916084-T-C 4048043-T-C FGC31174 *
7377583-T-A 7509542-T-A FGC31172 YY*
21535567-A-G 19373681-A-G **
22234312-C-T 20072426-C-T DYZ19 **
22216755-A-C 20054869-A-C FGC22226 ****
19183814-C-CTTTTT 17071934-C-CTTTTT 28×T**
22420086-G-A 20258200-G-A FGC22227 DYZ19 **
13464536-T-G 11308860-T-G *****
22294939-C-T 20133053-C-T DYZ19 **
5845271-A-T 5977230-A-T **
3375301-TTA-T 3507260-TTA-T **
4630756-TTTTTG-T 4762715-TTTTTG-T 8×TTTTG**
13463772-G-A 11308096-G-A **
26310632-C-CTTTTT 24164485-C-CTTTTT P1_Y1 28×T**
5845252-G-A 5977211-G-A Z131 S249 **
15557033-CAAAAAA-C 13445153-CAAAAAA-C 18×A**
58855588-G-C 56735283-C-G ***
58876165-A-G 56714706-T-C ***
58876164-T-C 56714707-A-G ***
58874504-G-C 56716367-C-G ***
58874441-A-C 56716430-T-G ***
58873055-G-C 56717816-C-G ***
58872265-C-G 56718606-G-C ***
58868977-G-C 56721894-C-G ***
58868118-G-A 56722753-C-T ***
58868072-G-C 56722799-C-G ***
26460538-G-T 24314391-G-T P1_Y1 ***
58865539-T-A 56725332-A-T ***
58855729-G-A 56735142-C-T ***
58854293-C-A 56736578-G-T ***
58854302-C-A 56736569-G-T ***
58876181-C-A 56714690-G-T ***
58851071-T-G 56739800-A-C ***
58851054-T-C 56739817-A-G ***
27133349-C-G 24987202-C-G P1_g3 ***
27133350-C-T 24987203-C-T P1_g3 ***
58845709-G-C 56745162-C-G ***
27249589-T-A 25103442-T-A P1_g3 ***
27249596-A-T 25103449-A-T P1_g3 ***
27306765-A-G 25160618-A-G P1_g3 ***
27306817-G-A 25160670-G-A P1_g3 ***
58843855-G-C 56747016-C-G ***
58840663-A-G 56750208-T-C ***
58876170-G-C 56714701-C-G ***
58879653-G-C 56711218-C-G 4×CATTC***
58876979-G-C 56713892-C-G ***
58894667-C-T 56696204-G-A ***
58909314-T-C 56681557-A-G ***
58909311-G-A 56681560-C-T ***
58909295-C-T 56681576-G-A ***
58904197-T-C 56686674-A-G ***
58903522-C-G 56687349-G-C ***
58896231-A-T 56694640-T-A ***
58895958-T-C 56694913-A-G ***
26362431-A-T 24216284-A-T P1_Y1 ***
26453892-G-C 24307745-G-C P1_Y1 ***
58895800-A-T 56695071-T-A ***
58895798-G-C 56695073-C-G ***
58894681-A-G 56696190-T-C ***
58894590-C-G 56696281-G-C ***
58840185-A-C 56750686-T-G ***
58894560-C-G 56696311-G-C ***
58894553-A-T 56696318-T-A ***
58893412-G-T 56697459-C-A ***
58893312-G-T 56697559-C-A ***
58893295-G-T 56697576-C-A ***
58891848-G-C 56699023-C-G ***
58891703-T-C 56699168-A-G ***
58891671-T-A 56699200-A-T ***
58885006-G-C 56705865-C-G ***
58883279-G-A 56707592-C-T ***
58882765-C-T 56708106-G-A ***
58882103-A-G 56708768-T-C ***
58840197-G-A 56750674-C-T ***
58840162-T-A 56750709-A-T ***
27306821-G-A 25160674-G-A P1_g3 ***
27972847-T-C 25826700-T-C P1_Y2 ***
58820463-T-A 56770408-A-T ***
58819351-N-A ***
28805866-G-T 26659719-G-T ***
28478010-T-G 26331863-T-G ***
28106344-G-A 25960197-G-A P1_Y2 ***
28072532-A-G 25926385-A-G P1_Y2 ***
28072531-T-A 25926384-T-A P1_Y2 ***
28072530-T-C 25926383-T-C P1_Y2 ***
27343270-C-A 25197123-C-A P1_g3 ***
28072528-T-C 25926381-T-C P1_Y2 ***
27343271-A-T 25197124-A-T P1_g3 ***
28024629-C-T 25878482-C-T P1_Y2 ***
27972840-A-G 25826693-A-G P1_Y2 ***
58825280-A-C 56765591-T-G ***
27585914-A-T 25439767-A-T P1_Y2 ***
27753995-C-A 25607848-C-A P1_Y2 ***
27754005-A-C 25607858-A-C P1_Y2 ***
27754008-G-A 25607861-G-A P1_Y2 ***
27810259-A-G 25664112-A-G P1_Y2 ***
27810265-A-G 25664118-A-G P1_Y2 ***
27889328-C-T 25743181-C-T P1_Y2 ***
27962542-T-C 25816395-T-C P1_Y2 ***
27962537-C-G 25816390-C-G P1_Y2 ***
27889343-A-C 25743196-A-C P1_Y2 ***
27908217-G-A 25762070-G-A P1_Y2 ***
27938322-T-G 25792175-T-G P1_Y2 ***
58822973-T-A 56767898-A-T ***
27337022-C-T 25190875-C-T P1_g3 ***
27923955-T-A 25777808-T-A P1_Y2 ***
58833089-G-A 56757782-C-T ***
58839691-G-C 56751180-C-G ***
58839672-G-A 56751199-C-T ***
58839667-C-A 56751204-G-T ***
58839661-G-C 56751210-C-G ***
58839622-T-A 56751249-A-T ***
58839602-T-A 56751269-A-T ***
58839565-T-C 56751306-A-G ***
27312093-G-C 25165946-G-C P1_g3 ***
58839562-T-A 56751309-A-T ***
58839551-G-C 56751320-C-G ***
58838082-C-T 56752789-G-A ***
58836409-C-A 56754462-G-T ***
58832700-G-C 56758171-C-G ***
58825281-T-A 56765590-A-T ***
58832698-G-C 56758173-C-G ***
58832629-T-A 56758242-A-T ***
27312097-G-C 25165950-G-C P1_g3 ***
58832625-G-T 56758246-C-A ***
58832622-G-C 56758249-C-G ***
58832560-C-T 56758311-G-A ***
27325627-C-A 25179480-C-A P1_g3 ***
27336530-A-G 25190383-A-G P1_g3 ***
58830433-C-G 56760438-G-C ***
58829709-T-C 56761162-A-G ***
58828519-G-C 56762352-C-G ***
58825334-G-C 56765537-C-G ***
58825290-G-C 56765581-C-G ***
15132065-A-AT 13020152-A-AT 14×T***
5088778-ACGGAGGTTCAGTCTCCTCA-GCCGAGTCTCACTCTGTCG 5220737-ACGGAGGTTCAGTCTCCTCA-GCCGAGTCTCACTCTGTCG ***
23293557-AGT-A 21131671-AGT-A 21×GT***
22273610-TCATTAACAG-GCCTTCAGAT 20111724-TCATTAACAG-GCCTTCAGAT DYZ19 ***
26416267-GCCT-CCCC 24270120-GCCT-CCCC P1_Y1 ***
26098019-AAAAAGA-GAGAAGG 23951872-AAAAAGA-GAGAAGG P1_Y1 ***
25680004-GTCACG-CACACA 23533857-GTCACG-CACACA P1_b3 ***
24813128-A-ATCGCCCC 22666981-A-ATCGCCCC P3_b2 ***
24687805-CC-TG 22541658-CC-TG P3_b2 ***
24283456-GA-TC 22137309-GA-TC P3_t1 ***
23747205-C-CGTTTTTTTTT 21585319-C-CGTTTTTTTTT 29×T***
23084704-G-GTTTTTTTTTT 20922818-G-GTTTTTTTTTT 19×T***
22849491-CTTTTTTTT-C 20687605-CTTTTTTTT-C 20×T***
22355030-TGGCAC-CGATCT 20193144-TGGCAC-CGATCT DYZ19 ***
22336107-CA-AG 20174221-CA-AG DYZ19 ***
22336093-CCTTGTT-ACTTCAA 20174207-CCTTGTT-ACTTCAA DYZ19 ***
22332574-ACA-CCT 20170688-ACA-CCT DYZ19 ***
22264034-CG-C 20102148-CG-C DYZ19 ***
26488166-T-TA 24342019-T-TA P1_Y1 15×A***
22232092-GCAGC-ACAGA 20070206-GCAGC-ACAGA DYZ19 ***
21328805-CAA-C 19166919-CAA-C 30×A***
20962958-TGGCGT-GGGCAC 18801072-TGGCGT-GGGCAC P4_Dst ***
20664930-GCACA-TCAC 18503044-GCACA-TCAC P4_Prx ***
20403367-AAGGG-GTGTA 18241481-AAGGG-GTGTA P5_Dst ***
20392903-TG-CA 18231017-TG-CA P5_Dst ***
20332111-C-CAAAAA 18170225-C-CAAAAA P5_Dst 30×A***
20292316-C-CA 18130430-C-CA P5_Dst ***
20275392-A-ATGCC 18113506-A-ATGCC P5_Dst ***
20265317-AAATCA-CACTCG 18103431-AAATCA-CACTCG P5_Dst ***
20230152-T-TAA 18068266-T-TAA P5_Dst 16×A***
19951699-GTGAGTT-ATTTA 17839819-GTGAGTT-ATTTA P5_Prx ***
19926465-AT-GA 17814585-AT-GA P5_Prx ***
26453885-TGT-ATC 24307738-TGT-ATC P1_Y1 ***
27127661-CCTTC-TCTTT 24981514-CCTTC-TCTTT P1_g3 ***
19887277-T-TGA 17775397-T-TGA P5_Prx ***
58839578-TTCGAT-CTCTAG 56751288-ATCGAA-CTAGAG ***
59032949-TG-T 56886802-TG-T ***
58980672-TTCCACTCCACTC-T 56834525-TTCCACTCCACTC-T ***
58979103-T-TTTC 56832956-T-TTTC ***
58978442-TATTCCATC-T 56832295-TATTCCATC-T ***
58909297-ATT-TTC 56681572-AAT-GAA ***
58909252-TG-GT 56681618-CA-AC ***
58909239-T-TC 56681630-T-TG ***
58909162-TTAGCGGA-CTC 56681702-TCCGCTAA-GAG ***
58876141-TATCA-GTTCC 56714726-TGATA-GGAAC ***
58859565-A-AT 56731305-G-GA ***
58847164-CCAGTCTCTT-GCATTC 56743698-AAGAGACTGG-GAATGC ***
58847152-GTG-TTC 56743717-CAC-GAA ***
58839676-GATTCCC-TAGTCCA 56751189-GGGAATC-TGGACTA ***
58832649-GTTCG-ATTCC 56758218-CGAAC-GGAAT ***
27733432-CGTGTTGA-AGTGCTGG 25587285-CGTGTTGA-AGTGCTGG P1_Y2 ***
58832611-ACCT-TCCA 56758257-AGGT-TGGA ***
58832592-AAT-CAA 56758277-ATT-TTG ***
58832570-TTCGAT-CTCTAG 56758296-ATCGAA-CTAGAG ***
58832557-T-TC 56758313-C-CG ***
58832555-T-TGTGG 56758315-A-ACCAC ***
58819350-N-NCC ***
28805234-G-GAAACA 26659087-G-GAAACA ***
28790608-G-GGGGAATGTAATGTAA 26644461-G-GGGGAATGTAATGTAA 4×TGGAA***
28720132-C-CTTTTTTT 26573985-C-CTTTTTTT 24×T***
28503399-CAA-C 26357252-CAA-C 19×A***
28491336-A-AAAAAACACACCCC 26345189-A-AAAAAACACACCCC ***
28336692-A-AAAAAC 26190545-A-AAAAAC P1_b4 ***
27889347-AGC-A 25743200-AGC-A P1_Y2 ***
19887280-G-GTGTGTTTGTGAA 17775400-G-GTGTGTTTGTGAA P5_Prx ***
19862635-TG-T 17750755-TG-T P5_Prx ***
14143025-C-CA 12022319-C-CA 16×A***
6992553-CT-C 7124512-CT-C 17×T***
13223601-AGG-CAA 11067925-AGG-CAA ***
13143807-CTCCATTCCATTCCAT-C 10633293-CTCCATTCCATTCCAT-C 10×TCCAT***
13143767-TTCCATTCCACTCCACTGCACTGCACATCACTCTACTCCAC-T 10633253-TTCCATTCCACTCCACTGCACTGCACATCACTCTACTCCAC-T ***
13140119-AAACTCGCAC-A 10629605-AAACTCGCAC-A ***
13140113-TCCATTAAACTCGCACTCCAC-T 10629599-TCCATTAAACTCGCACTCCAC-T ***
13140108-TCCAATCCATTAAACTC-T 10629594-TCCAATCCATTAAACTC-T ***
13109917-GAGTTTC-CACTTTA 10599403-GAGTTTC-CACTTTA ***
13105561-GT-G 10595047-GT-G ***
9685439-GCA-CCC 9847830-GCA-CCC IR3_Prx ***
9438099-C-CTTTT 9600490-C-CTTTT 30×T***
9349863-G-GA 9512254-G-GA ***
7312612-AGA-GGG 7444571-AGA-GGG ***
7199342-C-CTTTTTT 7331301-C-CTTTTTT 24×T***
6284685-TGC-AGA 6416644-TGC-AGA IR3_Dst ***
13252783-GT-G 11097107-GT-G 11×T***
6284675-AAT-A 6416634-AAT-A IR3_Dst ***
5512875-C-CA 5644834-C-CA 22×A***
26300861-T-C 24154714-T-C P1_Y1 ***
4867555-TCACACA-T 4999514-TCACACA-T 19×CA***
4707512-C-CAAA 4839471-C-CAAA 18×A***
4067508-C-CTTTTT 4199467-C-CTTTTT 29×T***
3205872-AAC-A 3337831-AAC-A ***
5229600-C-CT 5361559-C-CT 13×T***
8214860-G-GT 8346819-G-GT 21×T***
3086544-C-CA 3218503-C-CA 18×A***
21713438-T-TA 19551552-T-TA 16×A***
5814488-G-GA 5946447-G-GA 18×A***
18571214-C-CT 16459334-C-CT 13×T***
13223610-CA-GG 11067934-CA-GG ***
13433434-AG-A 11277758-AG-A ***
19859745-GA-CG 17747865-GA-CG P5_Prx ***
15733879-CAAAAAAA-C 13621999-CAAAAAAA-C 25×A***
19793045-ACT-TCTG 17681165-ACT-TCTG P5_Prx ***
19716535-GAAAATA-CAAG 17604655-GAAAATA-CAAG P5_Prx ***
19570628-GTTCTCA-TTTTTCAAATG 17458748-GTTCTCA-TTTTTCAAATG P5_Prx ***
19189430-C-CTTTTTTTTT 17077550-C-CTTTTTTTTT 35×T***
19146569-C-CTTTTTTT 17034689-C-CTTTTTTT 28×T***
18272652-AAGC-TAGG 16160772-AAGC-TAGG P6_Prx ***
18035665-C-CTTTTTTGTTTTTTTTTTT 15923785-C-CTTTTTTGTTTTTTTTTTT 30×T***
17474981-CG-TC 15363101-CG-TC ***
17474961-GAGAC-AAGAT 15363081-GAGAC-AAGAT ***
17235504-GATA-G 15123624-GATA-G 6×ATA***
16968150-C-CAAAAAA 14856270-C-CAAAAAA 26×A***
16868746-CATATATATATATATAT-C 14756866-CATATATATATATATAT-C 22×AT***
16290775-G-GTATATA 14178895-G-GTATATA 19×TA***
15309739-C-CAA 13197843-C-CA 41×A***
13450406-C-CTGCAT 11294730-C-CTGCAT ***
15171226-C-CTTTTTTTTTTTTTTT 13059312-C-CTTTTTTTTTTTTTTT 19×T***
14989218-T-TAAAAAAAAAAAAAAAAA 12877284-TAA-T 27×A***
13855504-TGGAATGGAATG-T 11734798-TGGAATGGAATG-T ***
13851951-GGAATGGAATC-G 11731245-GGAATGGAATC-G ***
13810882-AGGAAT-A 11690176-AGGAAT-A ***
13743373-AC-TG 11587697-AC-TG ***
13743365-GAAC-TAAT 11587689-GAAC-TAAT ***
13743355-AAAAC-GAACA 11587679-AAAAC-GAACA ***
13705881-T-TTGGAAACGAATGTAA 11550205-T-TTGGAAACGAATGTAA ***
13697778-CAAA-GAAT 11542102-CAAA-GAAT ***
13535702-CA-TG 11380026-CA-TG ***
13459168-A-ATCAATTTGAT 11303492-A-ATCAATTTGAT ***
13455859-CACTGGGTTTGAGTCAATACCATTCT-C 11300183-CACTGGGTTTGAGTCAATACCATTCT-C ***
13454768-ACTCTTGTTGAATAAATTGCACTCT-A 11299092-ACTCTTGTTGAATAAATTGCACTCT-A ***
26362368-G-A 24216221-G-A P1_Y1 ***
25922164-C-T 23776017-C-T P1_Y1 ***
26300803-A-C 24154656-A-C P1_Y1 ***
13465722-C-G 11310046-C-G ***
6197665-C-T 6329624-C-T IR3_Dst ***
6197660-A-G 6329619-A-G IR3_Dst ***
5552071-G-A 5684030-G-A ***
5065883-G-A 5197842-G-A ***
4821852-T-C 4953811-T-C ***
3558202-G-A 3690161-G-A ***
3313067-G-A 3445026-G-A ***
27923983-A-G 25777836-A-G P1_Y2 ***
22332701-G-T 20170815-G-T DYZ19 ***
22332704-A-C 20170818-A-C DYZ19 ***
59018114-T-G 56871967-T-G ***
13416312-G-T 11260636-G-T ***
22332915-A-T 20171029-A-T DYZ19 ***
6284666-G-A 6416625-G-A IR3_Dst ***
19309460-T-C 17197580-T-C A9625 11×AC***
5786608-C-CAAAA 5918567-C-CAAAA 20×A***
22293085-A-C 20131199-A-C DYZ19 ***
28802741-A-ATGGAG 26656594-A-ATGGAG ***
13448633-GCATTCCATTCC-G 11292957-GCATTCCATTCC-G 13×CATTC***
22251287-T-C 20089401-T-C DYZ19 ***
58903377-G-C 56687494-C-G ***
58849319-T-A 56741552-A-T ***
58849307-T-C 56741564-A-G ***
58832638-G-C 56758233-C-G ***
21118158-T-TAC 18956272-T-TAC FGC5438 22×AC***
58848444-A-C 56742427-T-G ***
58840161-A-C 56750710-T-G ***
6197672-A-T 6329631-A-T IR3_Dst ***
6305921-A-C 6437880-A-C IR3_Dst ***
14286928-C-CT 12166222-C-CT 16×T***
13109911-A-G 10599397-A-G ***
13734109-A-T 11578433-A-T ***
13725699-C-G 11570023-C-G ***
13725685-G-A 11570009-G-A ***
13721999-C-G 11566323-C-G ***
13703106-G-A 11547430-G-A ***
13488308-T-G 11332632-T-G ***
13488296-A-T 11332620-A-T ***
13290772-G-A 11135096-G-A ***
13283053-C-T 11127377-C-T ***
13115292-T-A 10604778-T-A ***
13115283-C-T 10604769-C-T ***
13110871-G-C 10600357-G-C ***
13110866-T-G 10600352-T-G ***
13109882-G-A 10599368-G-A ***
6310917-C-G 6442876-C-G IR3_Dst ***
13109867-C-A 10599353-C-A ***
13105703-G-T 10595189-G-T ***
13105668-A-T 10595154-A-T ***
13105595-G-A 10595081-G-A ***
13105588-T-C 10595074-T-C ***
9729320-C-A 9891711-C-A IR3_Prx ***
9685395-A-G 9847786-A-G IR3_Prx ***
9685381-G-A 9847772-G-A IR3_Prx ***
9579275-A-G 9741666-A-G IR3_Prx ***
9579274-A-T 9741665-A-T IR3_Prx ***
9579273-A-T 9741664-A-T IR3_Prx ***
9579198-A-T 9741589-A-T IR3_Prx ***
9579196-G-T 9741587-G-T IR3_Prx ***
21446217-C-CT 19284331-C-CT 23×T***
58909814-G-T 56681057-C-A ***
13740592-C-A 11584916-C-A ***
22504677-T-G 20342791-T-G DYZ19 ***
6123526-A-C 6255485-A-C ***
58836217-G-C 56754654-C-G ***
27905977-T-A 25759830-T-A P1_Y2 ***
22504674-G-C 20342788-G-C DYZ19 ***
13346809-C-T 11191133-C-T ***
22421494-G-A 20259608-G-A DYZ19 ***
22241445-A-G 20079559-A-G DYZ19 ***
7935855-T-TA 8067814-T-TA 22×A***
19270535-TAC-AAA 17158655-TAC-AAA ***
28253524-C-CAA 26107377-C-CAA P1_b4 ***
58909366-C-A 56681505-G-T ***
22365765-A-C 20203879-A-C DYZ19 ***
13459116-GATTCCATTCCATTCCATTCC-G 11303440-GATTCCATTCCATTCCATTCC-G 10×ATTCC***
22236408-AT-GG 20074522-AT-GG DYZ19 ***
13461020-T-G 11305344-T-G ***
4675104-AT-A 4807063-AT-A 12×T***
22337118-C-T 20175232-C-T DYZ19 ***
22232403-T-A 20070517-T-A DYZ19 ***
58822964-A-T 56767907-T-A ***
22252974-A-AC 20091088-A-AC DYZ19 ***
22244987-A-G 20083101-A-G DYZ19 ***
58875108-T-C 56715763-A-G ***
58865554-T-G 56725317-A-C ***
24836796-G-A 22690649-G-A P3_b2 ***
24836794-A-G 22690647-A-G P3_b2 ***
22335999-TT-GG 20174113-TT-GG DYZ19 ***
21556919-C-CTTTTTT 19395033-C-CTTTTTT 23×T***
13810889-C-A 11690183-C-A 9×AATGG***
7479291-G-A 7611250-G-A IR1_L ***
13846528-T-TGG 11725822-T-TGG ***
58904203-G-A 56686668-C-T ***
58877059-A-C 56713812-T-G ***
58826702-T-A 56764169-A-T ***
58819350-N-T ***
13109834-G-C 10599320-G-C ***
58903361-T-C 56687510-A-G ***
22332725-T-C 20170839-T-C DYZ19 ***
58830797-GT-TC 56760073-AC-GA ***
13699837-TC-AT 11544161-TC-AT ***
13454812-CATTCCATTCCATTCCATTCT-C 11299136-CATTCCATTCCATTCCATTCT-C ***
13258629-GG-AA 11102953-GG-AA ***
58911369-A-C 56679502-T-G ***
58908575-T-C 56682296-A-G ***
58906355-G-A 56684516-C-T ***
58883313-G-C 56707558-C-G ***
58839600-A-C 56751271-T-G ***
13846549-C-T 11725843-C-T ***
13745991-T-A 11590315-T-A ***
13703095-T-C 11547419-T-C ***
13109875-G-T 10599361-G-T ***
13109874-T-C 10599360-T-C ***
10091274-A-T 10253665-A-T ***
58877129-T-C 56713742-A-G ***
58848578-G-T 56742293-C-A ***
58877042-CTCGAA-TTCCAT 56713824-TTCGAG-ATGGAA ***
2659275-A-AT 2791234-A-AT 9×T***
26948745-G-A 24802598-G-A P1_r3 ***
22235727-G-A 20073841-G-A DYZ19 ***
22231319-G-T 20069433-G-T DYZ19 ***
22219337-A-T 20057451-A-T DYZ19 ***
13740589-C-A 11584913-C-A ***
13743393-A-T 11587717-A-T ***
26259613-G-A 24113466-G-A P1_Y1 ***
22273629-C-T 20111743-C-T DYZ19 ***
22434369-A-C 20272483-A-C DYZ19 ***
22420941-A-C 20259055-A-C DYZ19 ***
22353452-A-G 20191566-A-G DYZ19 ***
22352243-G-T 20190357-G-T DYZ19 ***
22343600-T-A 20181714-T-A DYZ19 ***
22338153-G-T 20176267-G-T DYZ19 ***
22337123-G-T 20175237-G-T DYZ19 ***
22336137-T-C 20174251-T-C DYZ19 ***
22336087-T-A 20174201-T-A DYZ19 ***
22335817-T-C 20173931-T-C DYZ19 ***
22332721-A-G 20170835-A-G DYZ19 ***
22329815-A-G 20167929-A-G DYZ19 ***
22265899-A-G 20104013-A-G DYZ19 ***
22503673-C-G 20341787-C-G DYZ19 ***
22252829-C-T 20090943-C-T DYZ19 ***
22248754-C-A 20086868-C-A DYZ19 ***
22248745-A-G 20086859-A-G DYZ19 ***
22248530-C-T 20086644-C-T DYZ19 ***
20962975-T-C 18801089-T-C P4_Dst ***
20962971-T-C 18801085-T-C P4_Dst ***
20946252-C-A 18784366-C-A P4_Dst ***
20673967-G-T 18512081-G-T P4_Prx ***
20664928-G-C 18503042-G-C P4_Prx ***
20599848-T-A 18437962-T-A P5_Dst ***
20516198-A-T 18354312-A-T P5_Dst ***
20516189-G-A 18354303-G-A P5_Dst ***
20516179-C-T 18354293-C-T P5_Dst ***
22435818-G-A 20273932-G-A DYZ19 ***
24163722-C-A 22017575-C-A P3_b1 ***
20464317-C-A 18302431-C-A P5_Dst ***
25948665-A-T 23802518-A-T P1_Y1 ***
26259539-G-T 24113392-G-T P1_Y1 ***
26211450-T-C 24065303-T-C P1_Y1 ***
26211446-C-T 24065299-C-T P1_Y1 ***
26211442-T-G 24065295-T-G P1_Y1 ***
26211429-C-T 24065282-C-T P1_Y1 ***
26098040-A-G 23951893-A-G P1_Y1 ***
26098021-A-G 23951874-A-G P1_Y1 ***
26098019-A-G 23951872-A-G P1_Y1 ***
26098018-A-G 23951871-A-G P1_Y1 ***
26046791-G-T 23900644-G-T P1_Y1 ***
26046786-G-T 23900639-G-T P1_Y1 ***
26046785-A-G 23900638-A-G P1_Y1 ***
26039431-A-G 23893284-A-G P1_Y1 ***
25922144-T-A 23775997-T-A P1_Y1 ***
24283462-A-T 22137315-A-T P3_t1 ***
25922136-T-A 23775989-T-A P1_Y1 ***
25870907-G-C 23724760-G-C P1_Y1 ***
25856385-T-A 23710238-T-A P1_Y1 ***
25856383-T-A 23710236-T-A P1_Y1 ***
25654006-A-G 23507859-A-G P1_b3 ***
25624765-G-A 23478618-G-A P1_b3 ***
25604452-G-A 23458305-G-A P1_gr1 ***
25604451-T-C 23458304-T-C P1_gr1 ***
25604450-A-G 23458303-A-G P1_gr1 ***
25604445-A-G 23458298-A-G P1_gr1 ***
25289425-C-G 23143278-C-G P2_r1 ***
24687802-C-A 22541655-C-A P3_b2 ***
24387593-A-C 22241446-A-C ***
20478209-T-A 18316323-T-A P5_Dst ***
20464300-C-T 18302414-C-T P5_Dst ***
13746007-A-T 11590331-A-T 4×GGAAT***
19793053-T-A 17681173-T-A P5_Prx ***
19887267-T-A 17775387-T-A P5_Prx ***
19870318-T-G 17758438-T-G P5_Prx ***
19859751-T-G 17747871-T-G P5_Prx ***
19846357-C-G 17734477-C-G P5_Prx ***
19846356-T-G 17734476-T-G P5_Prx ***
19837061-A-C 17725181-A-C P5_Prx ***
19837059-C-T 17725179-C-T P5_Prx ***
19837055-A-T 17725175-A-T P5_Prx ***
19804865-T-G 17692985-T-G P5_Prx ***
19804853-C-A 17692973-C-A P5_Prx ***
19804836-T-G 17692956-T-G P5_Prx ***
19804821-G-A 17692941-G-A P5_Prx ***
19804816-T-C 17692936-T-C P5_Prx ***
19793045-A-T 17681165-A-T P5_Prx ***
19926439-C-A 17814559-C-A P5_Prx ***
19758827-T-C 17646947-T-C P5_Prx ***
19728553-G-A 17616673-G-A P5_Prx ***
19716530-T-C 17604650-T-C P5_Prx ***
19716525-T-C 17604645-T-C P5_Prx ***
19690811-A-G 17578931-A-G P5_Prx ***
19570627-G-T 17458747-G-T P5_Prx ***
18333094-T-A 16221214-T-A P6_Prx ***
18279921-T-C 16168041-T-C P6_Prx ***
18272660-A-G 16160780-A-G P6_Prx ***
18272655-C-G 16160775-C-G P6_Prx ***
18272652-A-T 16160772-A-T P6_Prx ***
17474974-G-A 15363094-G-A ***
14610564-T-C 12498766-T-C ***
19926430-A-G 17814550-A-G P5_Prx ***
19926445-A-G 17814565-A-G P5_Prx ***
20450988-G-A 18289102-G-A P5_Dst ***
20293663-T-C 18131777-T-C P5_Dst ***
20450985-G-A 18289099-G-A P5_Dst ***
20402696-T-A 18240810-T-A P5_Dst ***
20392895-A-T 18231009-A-T P5_Dst ***
20392891-A-G 18231005-A-G P5_Dst ***
20392888-T-A 18231002-T-A P5_Dst ***
20382751-A-T 18220865-A-T P5_Dst ***
20382748-A-G 18220862-A-G P5_Dst ***
20382746-A-C 18220860-A-C P5_Dst ***
20353402-T-C 18191516-T-C P5_Dst ***
20333374-T-A 18171488-T-A P5_Dst ***
20333373-T-C 18171487-T-C P5_Dst ***
20293666-T-C 18131780-T-C P5_Dst ***
20293664-T-G 18131778-T-G P5_Dst ***
20293661-T-G 18131775-T-G P5_Dst ***
19926465-A-G 17814585-A-G P5_Prx ***
20292685-A-C 18130799-A-C P5_Dst ***
20292684-T-G 18130798-T-G P5_Dst ***
20292678-G-T 18130792-G-T P5_Dst ***
20292329-G-A 18130443-G-A P5_Dst ***
20292321-G-T 18130435-G-T P5_Dst ***
20275400-C-A 18113514-C-A P5_Dst ***
20125076-T-C 18013196-T-C P5_Dst ***
20083869-A-C 17971989-A-C P5_Dst ***
19951710-A-T 17839830-A-T P5_Prx ***
19950256-G-T 17838376-G-T P5_Prx ***
19950228-A-T 17838348-A-T P5_Prx ***
19950222-A-G 17838342-A-G P5_Prx ***
19926466-T-A 17814586-T-A P5_Prx ***
23825753-C-CAAAAA 21663867-C-CAAAAA 21×A***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Haplotype Progression

The data below reveals the progression of changes in the haplotype. The bottom row is the haplotype for this man and above him are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are very much a work in progress, and any suggested modifications are appreciated. I think we can use our vast collection of haplotype data to refine these haplotypes. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

DYS393
DYS390
DYS19
DYS391
DYS385
DYS426
DYS388
DYS439
DYS389i
DYS392
DYS389ii
DYS458
DYS459
DYS455
DYS454
DYS447
DYS437
DYS448
DYS449
DYS464
DYS460
Y-GATA-H4
YCAII
DYS456
DYS607
DYS576
DYS570
CDY
DYS442
DYS438
DYS531
DYS578
DYF395S1
DYS590
DYS537
DYS641
DYS472
DYF406S1
DYS511
DYS425
DYS413
DYS557
DYS594
DYS436
DYS490
DYS534
DYS450
DYS444
DYS481
DYS520
DYS446
DYS617
DYS568
DYS487
DYS572
DYS640
DYS492
DYS565
DYS710
DYS485
DYS632
DYS495
DYS540
DYS714
DYS716
DYS717
DYS505
DYS556
DYS549
DYS589
DYS522
DYS494
DYS533
DYS636
DYS575
DYS638
DYS462
DYS452
DYS445
Y-GATA-A10
DYS463
DYS441
Y-GGAAT-1B07
DYS525
DYS712
DYS593
DYS650
DYS532
DYS715
DYS504
DYS513
DYS561
DYS552
DYS726
DYS635
DYS587
DYS643
DYS497
DYS510
DYS434
DYS461
DYS435
P312/S1161324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123315916122626191211131210912121011113012132413101020151913241712152412231810141791211
Kennedy1325141111-14121211131329179-1011112515182915-15-17-18111119-231515181733-35121211915-1681010810101223-231610121215812242113121113111112123515916122426191211131210912121011113012122413101121151713241913152412231810141791211

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 594971058389476342007708157
Kit: D8FCK*16000000100000008300000
Used in age calculations16000000100000008300000
Counts of SNPs159
Variant counts last updated 2017-11-05 23:03:00.

* BED data not available. Using default values.


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