Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > ZZ10 > Z253 > Z2534 > ~22280136-C-G > FGC5618 > L226 > FGC5660 > Z17669 > A10950 > DC29 > 7980111-A-T

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
422298
BigY2
422298
26224807-T-TTA 24078660-T-TTA P1_Y1 9×TAA*
20673810-C-T 18511924-C-T P4_Prx A*
13698576-T-C 11542900-T-C A*
28816766-T-G 26670619-T-G A*
13479206-C-T 11323530-C-T A*
22536147-A-G 20374261-A-G DC485 Y++
19422124-C-CAAT 17310244-C-CAAT 7×AAT+*
22893304-CCTTTCTTTCTTT-C 20731418-CCTTTCTTTCTTT-C 17×CTTT+**
17323720-AGGAG-A 15211840-AGGAG-A 4×GGAG+**
13880384-T-C 11759678-T-C DC629 Y**+
14873906-A-G 12761976-A-G DC483 YY++
17255238-T-C 15143358-T-C DC484 YY++
7828135-A-G 7960094-A-G DC482 YY++
13479203-G-A 11323527-G-A *
22230405-A-G 20068519-A-G BY6909 DYZ19 ****
14392171-G-A 12271467-G-A YY16×A****
56834251-TC-T *
10679323-A-T **
10034262-C-A 10196653-C-A **
10869475-G-T **
10063082-A-T 10225473-A-T **
10051462-C-T 10213853-C-T **
10869587-G-T **
10900791-A-C **
10902988-G-T **
10974318-A-T **
10974349-A-C **
10974371-A-T **
10974369-G-T **
10823360-A-G **
10982844-T-C **
10010622-C-G 10173013-C-G **
11003324-C-A **
11017710-C-A **
11019254-C-A **
10007702-C-G 10170093-C-G **
11031730-G-T **
11033174-A-G **
13195765-C-A 11040089-C-A **
13228940-C-A 11073264-C-A **
10830148-C-A **
10808219-C-A **
10817436-C-A **
10776376-C-A **
10679342-T-TA **
10679346-CC-T **
10679353-A-T **
10679385-T-A **
10683172-C-A **
10756108-A-G **
10762129-C-T **
10762134-T-G **
10762184-C-A **
10762190-A-AATCTC **
10664955-A-T **
10811059-G-T **
10777809-C-A **
10662989-G-T **
10790235-A-T **
10655148-C-A **
13272237-C-A 11116561-C-A **
10790275-A-G **
10795285-C-A **
10804476-C-G **
10063091-T-A 10225482-T-A **
10807073-C-CCTTGA **
10679328-A-T **
13262714-T-G 11107038-T-G **
13405656-C-A 11249980-C-A **
13298014-C-A 11142338-C-A **
14592266-GGAGGGGGAGGTTACAGT-G 12480466-GGAGGGGGAGGTTACAGT-G **
14263238-A-C 12142532-A-C **
14302931-AG-A 12182225-AG-A **
14314336-C-A 12193630-C-A **
14364645-G-T 12243940-G-T **
14366268-C-A 12245563-C-A **
14384302-T-G 12263598-T-G **
14395738-T-C 12275034-T-C **
14462661-C-T 12341934-C-T Y49566 **
14483825-T-C 12363094-T-C **
14489805-C-A 12369074-C-A **
14521640-A-G 12409841-A-G **
14539173-T-G 12427374-T-G **
14610673-ACCT-A 12498875-ACCT-A **
14144003-T-A 12023297-T-A **
14614681-C-A 12502879-C-A **
14693511-G-C 12581577-G-C **
14693515-A-G 12581581-A-G **
14693521-GACA-G 12581587-GACA-G **
14693526-T-TGGG 12581592-T-TGGG **
14693529-G-T 12581595-G-T **
14693540-G-A 12581606-G-A **
14714830-C-A 12602897-C-A **
14736093-C-A 12624161-C-A **
14760933-CTACCATTTGATCCAGCAA-C 12649002-CTACCATTTGATCCAGCAA-C **
14795109-C-T 12683180-C-T **
14822835-C-A 12710902-C-A **
14826546-GTGT-G 12714613-GTGT-G **
14193127-T-C 12072421-T-C **
14124982-T-C 12004276-T-C **
13298218-C-A 11142542-C-A **
11659037-C-A **
13364293-G-C 11208617-G-C **
9947525-G-T 10109916-G-T **
13450120-C-G 11294444-C-G **
13465985-A-G 11310309-A-G **
13468640-A-T 11312964-A-T **
13522878-C-A 11367202-C-A **
13585119-G-T 11429443-G-T **
13585191-C-A 11429515-C-A **
11646831-T-C **
11649346-T-C **
11658458-G-T **
11658480-A-T **
11672771-G-A **
14076134-C-A 11955428-C-A **
11673691-T-C **
13809311-ATCG-A 11688605-ATCG-A **
13855839-G-C 11735133-G-C **
13856187-G-T 11735481-G-T **
13866077-C-A 11745371-C-A **
13909779-C-T 11789073-C-T **
13975847-C-A 11855141-C-A **
14006695-C-G 11885989-C-G **
14006796-C-G 11886090-C-G **
14006805-G-T 11886099-G-T **
14027151-C-G 11906445-C-G **
14029504-A-G 11908798-A-G **
14052083-C-A 11931377-C-A **
9958220-C-A 10120611-C-A **
9075230-G-C 9237621-G-C **
9942363-C-A 10104754-C-A **
5761498-C-A 5893457-C-A **
5022643-T-C 5154602-T-C **
5046795-A-G 5178754-A-G **
5190156-A-C 5322115-A-C **
5201817-C-A 5333776-C-A **
5274871-C-A 5406830-C-A **
5292168-C-A 5424127-C-A **
5459850-A-C 5591809-A-C **
5484666-A-C 5616625-A-C **
5526911-C-A 5658870-C-A **
5601085-T-A 5733044-T-A **
5655778-G-T 5787737-G-T **
5782406-G-A 5914365-G-A **
4918463-C-A 5050422-C-A **
5968347-C-A 6100306-C-A **
5976874-G-T 6108833-G-T **
5999479-G-T 6131438-G-T **
6068619-G-T 6200578-G-T **
6088841-G-T 6220800-G-T **
6400971-G-A 6532930-G-A **
6406008-C-CT 6537967-C-CT 10×T**
6578838-C-A 6710797-C-A **
6603431-G-T 6735390-G-T **
6644843-C-A 6776802-C-A **
6691534-C-A 6823493-C-A **
6697120-T-C 6829079-T-C **
4970003-T-C 5101962-T-C **
4883602-A-T 5015561-A-T **
6765770-C-A 6897729-C-A **
4129808-T-C 4261767-T-C **
3127276-C-A 3259235-C-A **
3127351-A-G 3259310-A-G **
3263653-C-A 3395612-C-A **
3343383-T-C 3475342-T-C **
3479257-G-T 3611216-G-T **
3493903-G-T 3625862-G-T **
3519450-T-C 3651409-T-C **
3721406-C-A 3853365-C-A **
3997601-G-T 4129560-G-T **
4032448-C-A 4164407-C-A **
4032565-C-A 4164524-C-A **
4129774-A-G 4261733-A-G **
4159835-C-A 4291794-C-A **
4868296-C-T 5000255-C-T **
4200924-C-A 4332883-C-A **
4240833-A-C 4372792-A-C **
4273818-G-T 4405777-G-T **
4302194-G-A 4434153-G-A **
4427415-C-A 4559374-C-A **
4448928-T-G 4580887-T-G **
4632801-T-G 4764760-T-G **
4632888-C-A 4764847-C-A **
4654560-G-T 4786519-G-T **
4851467-G-T 4983426-G-T **
4851469-G-T 4983428-G-T **
4866279-G-T 4998238-G-T **
6698874-A-T 6830833-A-T **
6769841-C-A 6901800-C-A **
9937089-T-A 10099480-T-A **
7984492-G-T 8116451-G-T **
7337311-C-G 7469270-C-G **
7377461-G-A 7509420-G-A **
7387720-C-A 7519679-C-A **
7425242-C-A 7557201-C-A **
7431705-G-T 7563664-G-T **
7434143-G-T 7566102-G-T **
7534493-C-T 7666452-C-T **
7645156-C-G 7777115-C-G **
7721274-G-T 7853233-G-T **
7721294-G-C 7853253-G-C **
7757349-C-A 7889308-C-A **
8408424-T-A 8540383-T-A **
7211333-G-T 7343292-G-T **
8556138-C-A 8688097-C-A **
8654117-T-G 8786076-T-G **
8661024-G-T 8792983-G-T **
8737948-C-A 8869907-C-A **
8776730-A-C 8908689-A-C **
8786596-G-T 8918555-G-T **
8790533-C-A 8922492-C-A **
14995671-CTTTTTGTAGAGACGA-C 12883756-CTTTTTGTAGAGACGA-C **
9184478-T-A 9346869-T-A **
9560125-C-A 9722516-C-A IR3_Prx **
9855927-T-A 10018318-T-A **
9932146-C-A 10094537-C-A **
7316627-C-A 7448586-C-A **
7206811-C-A 7338770-C-A **
6773260-C-G 6905219-C-G **
7098095-C-G 7230054-C-G **
6816731-AAG-T 6948690-AAG-T **
6830714-T-C 6962673-T-C **
6833356-A-G 6965315-A-G **
6858620-G-T 6990579-G-T **
6861546-C-A 6993505-C-A **
6916220-C-A 7048179-C-A **
6977656-A-G 7109615-A-G **
7039388-C-A 7171347-C-A **
7058185-A-C 7190144-A-C **
7085239-A-G 7217198-A-G **
7091349-T-A 7223308-T-A **
7092509-G-A 7224468-G-A **
7116795-C-A 7248754-C-A **
7206801-C-A 7338760-C-A **
7117628-G-T 7249587-G-T **
7127368-A-C 7259327-A-C **
7132058-C-A 7264017-C-A **
7135493-C-A 7267452-C-A **
7148125-G-T 7280084-G-T **
7157080-T-C 7289039-T-C **
7171910-C-A 7303869-C-A **
7177042-G-A 7309001-G-A **
7199369-GA-T 7331328-GA-T **
7199374-A-G 7331333-A-G **
7199383-C-T 7331342-C-T **
7199392-G-T 7331351-G-T **
14873047-A-C 12761117-A-C **
15342720-A-T 13230839-A-T **
15049928-A-T 12938019-A-T **
22787102-G-T 20625216-G-T **
21831868-G-T 19669982-G-T **
22065298-G-A 19903412-G-A **
22078258-A-G 19916372-A-G **
22168362-C-A 20006476-C-A **
22199447-C-A 20037561-C-A **
22214659-T-C 20052773-T-C **
22289405-C-A 20127519-C-A DYZ19 **
22520784-G-A 20358898-G-A **
22587737-A-G 20425851-A-G **
22653308-C-A 20491422-C-A **
22662064-T-C 20500178-T-C **
22838306-G-A 20676420-G-A **
21806266-G-T 19644380-G-T **
22838380-A-T 20676494-A-T **
22875905-G-A 20714019-G-A **
22948217-T-C 20786331-T-C **
23044165-C-A 20882279-C-A **
23062132-C-A 20900246-C-A **
23065828-C-A 20903942-C-A **
23066853-C-A 20904967-C-A **
23111227-T-G 20949341-T-G **
23142423-C-A 20980537-C-A **
23188457-T-A 21026571-T-A **
23188478-T-A 21026592-T-A **
23188506-C-T 21026620-C-T **
21810010-T-A 19648124-T-A **
21770010-C-CA 19608124-C-CA **
23209775-C-A 21047889-C-A **
21389863-G-A 19227977-G-A **
20755556-G-T 18593670-G-T P4_Prx **
20840871-GA-G 18678985-GA-G P4_Gap 8×A**
21087069-A-G 18925183-A-G **
21127665-C-A 18965779-C-A **
21146343-C-A 18984457-C-A **
21189540-C-A 19027654-C-A **
21230079-C-A 19068193-C-A **
21285464-G-T 19123578-G-T **
21308860-C-A 19146974-C-A **
21362808-T-C 19200922-T-C **
21367196-A-G 19205310-A-G **
21388779-C-A 19226893-C-A **
21427820-C-T 19265934-C-T **
21770010-C-A 19608124-C-A **
21444481-C-A 19282595-C-A **
21456078-C-T 19294192-C-T **
21512333-G-A 19350447-G-A **
21515857-C-G 19353971-C-G **
21544857-C-G 19382971-C-G **
21554453-A-T 19392567-A-T **
21555665-AAGGAATAGAATGTATATTCTGT-A 19393779-AAGGAATAGAATGTATATTCTGT-A **
21565918-G-A 19404032-G-A **
21565922-A-G 19404036-A-G **
21604022-AGGT-A 19442136-AGGT-A **
21679103-G-T 19517217-G-T **
21713474-G-T 19551588-G-T **
23205997-T-A 21044111-T-A **
23225291-C-G 21063405-C-G **
20692832-T-A 18530946-T-A P4_Prx **
28761347-T-C 26615200-T-C **
28441826-G-A 26295679-G-A P1_gr2 **
28545778-G-T 26399631-G-T **
28545844-C-T 26399697-C-T **
28547287-C-A 26401140-C-A **
28548677-C-A 26402530-C-A **
28550193-A-G 26404046-A-G **
28574580-T-C 26428433-T-C **
28621858-A-G 26475711-A-G **
28627223-T-G 26481076-T-G **
28633166-C-A 26487019-C-A **
28644396-T-C 26498249-T-C **
28691447-CAAA-C 26545300-CAAA-C 16×A**
28762701-T-C 26616554-T-C **
28157264-T-TTA 26011117-T-TTA P1_b4 **
28772131-C-A 26625984-C-A **
28772791-C-A 26626644-C-A **
28798076-T-C 26651929-T-C **
56831766-G-T **
56835403-G-T **
56838428-T-G **
56838440-A-G **
56838455-G-T **
56838462-G-C **
56838479-G-C **
56838493-A-T **
56841220-A-T **
28438217-A-G 26292070-A-G P1_gr2 **
28025270-C-T 25879123-C-T P1_Y2 **
23345840-G-T 21183954-G-T **
24446743-T-C 22300596-T-C **
23373057-G-T 21211171-G-T **
23377862-C-A 21215976-C-A **
23419125-C-G 21257239-C-G **
23472188-G-T 21310302-G-T **
23475664-G-T 21313778-G-T **
23789409-G-T 21627523-G-T **
23807110-C-A 21645224-C-A **
21752233-C-T **
24290745-G-C 22144598-G-C P3_t1 **
24293019-T-TC 22146872-T-TC P3_t1 **
24295366-C-CAA 22149219-C-CAA P3_t1 **
24445362-TCA-T 22299215-TCA-T **
24450445-T-A 22304298-T-A **
28025269-T-G 25879122-T-G P1_Y2 **
24472450-G-T 22326303-G-T **
24634098-A-G 22487951-A-G P3_t2 **
24673255-G-T 22527108-G-T P3_b2 **
24841464-A-G 22695317-A-G P3_b2 **
25466615-G-T 23320468-G-T P2_r2 **
25466805-C-T 23320658-C-T P2_r2 **
26101377-A-C 23955230-A-C P1_Y1 **
27579092-A-C 25432945-A-C P1_Y2 **
27808669-G-T 25662522-G-T P1_Y2 **
27859411-A-AT 25713264-A-AT P1_Y2 **
27859442-T-A 25713295-T-A P1_Y2 **
28025181-T-G 25879034-T-G P1_Y2 **
20692855-A-G 18530969-A-G P4_Prx **
20473104-G-A 18311218-G-A P5_Dst **
15171339-C-T 13059425-C-T **
16964044-CA-C 14852164-CA-C **
16427371-C-A 14315491-C-A **
16450168-C-A 14338288-C-A **
16514562-C-A 14402682-C-A **
16581343-A-G 14469463-A-G **
16588360-T-A 14476480-T-A **
16706881-G-A 14595001-G-A **
16739079-A-AT 14627199-A-AT **
16743069-C-A 14631189-C-A **
16777994-C-A 14666114-C-A **
16931204-CT-C 14819324-CT-C **
16931276-G-T 14819396-G-T **
17013140-A-G 14901260-A-G **
16298387-T-C 14186507-T-C **
17048296-A-G 14936416-A-G **
17117384-C-A 15005504-C-A **
17213200-C-A 15101320-C-A **
17217330-C-A 15105450-C-A **
17221654-C-A 15109774-C-A **
17221793-G-A 15109913-G-A **
17233433-G-A 15121553-G-A **
17285112-C-A 15173232-C-A **
17287393-C-T 15175513-C-T **
17386669-G-T 15274789-G-T **
17449185-T-G 15337305-T-G **
17535469-T-G 15423589-T-G **
16381948-A-G 14270068-A-G **
16294901-T-C 14183021-T-C **
17716728-C-A 15604848-C-A **
15714344-C-A 13602464-C-A **
15180175-T-G 13068261-T-G **
15210983-G-T 13099069-G-T **
15218954-G-T 13107040-G-T **
15252797-C-A 13140883-C-A **
2990668-C-A 3122627-C-A **
15352703-C-A 13240822-C-A **
15387987-C-T 13276107-C-T **
15395544-T-C 13283664-T-C **
15402972-C-A 13291092-C-A **
15532358-A-G 13420478-A-G **
15650570-C-A 13538690-C-A **
15706976-C-A 13595096-C-A **
15739306-C-A 13627426-C-A **
16084175-G-T 13972295-G-T **
15742962-T-A 13631082-T-A **
15749280-T-C 13637400-T-C **
15769006-A-C 13657126-A-C **
15798249-C-A 13686369-C-A **
15831460-C-T 13719580-C-T **
15839854-G-C 13727974-G-C **
15839859-G-GT 13727979-G-GT **
15866133-A-T 13754253-A-T **
15963639-C-T 13851759-C-T **
15969714-C-A 13857834-C-A **
15975737-C-A 13863857-C-A **
16004332-C-A 13892452-C-A **
17638366-G-T 15526486-G-T **
17760557-C-A 15648677-C-A **
20473084-T-G 18311198-T-G P5_Dst **
19264535-CG-C 17152655-CG-C **
18994385-C-A 16882505-C-A **
19012373-T-A 16900493-T-A **
19059869-C-T 16947989-C-T **
19073838-GTATATATATATATATATATA-G 16961958-GTATATATATATATATATATA-G 16×TA**
19075635-C-A 16963755-C-A **
19079031-C-A 16967151-C-A **
19168976-C-A 17057096-C-A **
19200830-C-A 17088950-C-A **
19231371-G-T 17119491-G-T **
19231396-G-C 17119516-G-C **
19231400-C-G 17119520-C-G **
19246000-T-A 17134120-T-A **
19324183-G-A 17212303-G-A **
18850573-T-G 16738693-T-G **
19362606-C-A 17250726-C-A **
19415305-T-A 17303425-T-A **
19424877-G-T 17312997-G-T **
19445392-C-A 17333512-C-A **
19460740-G-A 17348860-G-A **
19509748-A-C 17397868-A-C **
19517903-A-G 17406023-A-G **
19544049-G-A 17432169-G-A **
19622057-T-A 17510177-T-A P5_Prx **
19748175-A-T 17636295-A-T P5_Prx **
20424901-G-A 18263015-G-A P5_Dst **
20458947-G-T 18297061-G-T P5_Dst **
18959196-C-G 16847316-C-G **
18848682-C-A 16736802-C-A **
17858567-C-T 15746687-C-T **
18262085-C-A 16150205-C-A **
17859257-C-A 15747377-C-A **
17859655-C-A 15747775-C-A **
17876553-C-A 15764673-C-A **
17876595-G-A 15764715-G-A **
17925352-C-A 15813472-C-A **
17925354-A-T 15813474-A-T **
17925357-A-T 15813477-A-T **
18050397-T-C 15938517-T-C **
18151687-C-A 16039807-C-A **
18165665-C-A 16053785-C-A **
18191273-G-T 16079393-G-T **
18238944-A-G 16127064-A-G **
18262090-C-A 16150210-C-A **
18827932-C-A 16716052-C-A **
18328820-G-C 16216940-G-C P6_Prx **
18429196-C-CAAG 16317316-C-CAAG P6_Dst 17×A**
18439254-G-GGT 16327374-G-GGT P6_Dst **
18491666-A-C 16379786-A-C P6_Dst **
18602254-C-A 16490374-C-A **
18602264-A-G 16490384-A-G **
18603392-T-A 16491512-T-A **
18604569-G-A 16492689-G-A **
18703274-C-A 16591394-C-A **
18738808-CATATATATATATATATATGTATATATATATATATATAT-C 16626928-CATATATATATATATATATGTATATATATATATATATAT-C 9×AT**
18753354-A-C 16641474-A-C **
18814948-T-A 16703068-T-A **
3000494-G-T 3132453-G-T **
4473095-C-T 4605054-C-T **
2986593-T-C 3118552-T-C **
10748224-G-C **
8913112-C-A 9045071-C-A **
11026108-C-A **
11026110-T-C **
13461220-G-T 11305544-G-T **
13480478-T-A 11324802-T-A **
18317651-G-T 16205771-G-T P6_Prx **
8090862-C-CA 8222821-C-CA 9×A**
10748190-G-C **
10748205-C-G **
10748234-G-T **
10899979-T-C **
14143007-C-A 12022301-C-A **
25030384-C-A 22884237-C-A g1 **
10935601-C-CTT **
2955524-C-T 3087483-C-T **
56728093-C-T **
56728102-G-A **
56728136-T-A **
10691042-C-T **
11643674-G-A **
13485444-A-T 11329768-A-T **
14440626-C-A 12319899-C-A **
13943051-C-A 11822345-C-A **
15397130-G-T 13285250-G-T **
2773813-G-T 2905772-G-T **
18688233-C-A 16576353-C-A **
25246582-A-T 23100435-A-T P2_r1 **
13585114-C-A 11429438-C-A **
7176923-C-A 7308882-C-A **
10776034-C-CCACTGGGGCT **
10776045-C-T **
14143975-C-G 12023269-C-G **
9700776-ATC-A 9863167-ATC-A IR3_Prx **
25556050-G-T 23409903-G-T P1_gr1 **
11019433-C-T **
25556082-A-T 23409935-A-T P1_gr1 **
13480498-T-G 11324822-T-G **
23825091-A-G 21663205-A-G **
10683127-C-T **
10683128-C-T **
10683138-T-C **
10935613-A-C **
8398839-GC-G 8530798-GC-G **
10794312-T-C **
6756906-C-A 6888865-C-A **
26100568-G-T 23954421-G-T P1_Y1 **
5687613-TA-T 5819572-TA-T 8×A**
18100823-C-A 15988943-C-A **
10766212-A-C **
10766132-C-T **
10766133-A-T **
10766142-T-C **
10766152-C-T **
10766183-G-T **
10766193-T-C **
10766194-C-A **
10766206-T-C **
10766210-A-G **
10766225-C-A **
9956379-AAG-A 10118770-AAG-A **
10766233-C-G **
10766234-T-A **
10766237-G-A **
14241190-C-A 12120484-C-A **
22950193-CTTTT-C 20788307-CTTTT-C 21×T**
10679387-G-T **
10663382-C-T **
10768561-C-A **
10768573-G-A **
10766127-C-T **
22820373-T-A 20658487-T-A **
11004428-T-G **
10658383-C-T **
15963962-C-A 13852082-C-A FGC70864 **
15882066-C-A 13770186-C-A **
21061787-C-A 18899901-C-A **
10689114-A-C **
56838436-A-G **
10790286-T-C **
14226644-C-A 12105938-C-A **
13214048-C-A 11058372-C-A **
10658374-A-T **
4898546-C-A 5030505-C-A **
10974355-G-C **
7166813-C-A 7298772-C-A **
10768608-C-A **
13461271-G-C 11305595-G-C **
20892326-A-AT 18730440-A-AT P4_Dst **
14366465-C-A 12245760-C-A **
10896002-G-T **
10662461-C-A **
10683374-C-A **
10974311-T-C **
10974321-G-C **
13485426-A-T 11329750-A-T **
27232202-C-T 25086055-C-T P1_g3 **
2718901-TTG-T 2850860-TTG-T **
10798347-A-G **
25556035-G-T 23409888-G-T P1_gr1 **
19926985-C-T 17815105-C-T P5_Prx **
16598968-C-A 14487088-C-A **
16818971-GTATATATATATA-G 14707091-GTATATATATATA-G 21×TA**
14693517-T-C 12581583-T-C **
58862750-A-T 56728121-T-A **
18855440-G-T 16743560-G-T **
10766143-G-T **
6916184-C-A 7048143-C-A **
10798351-C-A **
17714648-C-A 15602768-C-A **
17118412-G-T 15006532-G-T **
10658435-T-C **
10799469-C-A **
10799517-G-T **
9951923-C-A 10114314-C-A **
10667039-C-T **
11019438-C-G **
3411988-C-T 3543947-C-T **
10899947-A-T **
59025443-ATTT-A 56879296-ATTT-A 16×T**
21528257-C-A 19366371-C-A ****
10899956-C-CG **
6808163-C-G 6940122-C-G **
7270304-G-T 7402263-G-T **
7199342-C-CT 7331301-C-CT 24×T**
8379577-CTGTG-C 8511536-CTGTG-C 18×TG**
21993844-A-G 19831958-A-G ****
28781528-T-A 26635381-T-A CTS13027 9×A****
16739069-G-A 14627189-G-A 17×A**
6651655-C-A 6783614-C-A **
16868746-CATATAT-C 14756866-CATATAT-C 22×AT**
9459384-TTGTG-T 9621775-TTGTG-T 18×TG**
18443496-T-TAC 16331616-T-TAC P6_Dst 22×AC**
19748163-C-CT 17636283-C-CT P5_Prx 8×T**
19206738-AGGT-A 17094858-AGGT-A **
59005928-C-A 56859781-C-A **
25990634-GTTTTT-G 23844487-GTTTTT-G P1_Y1 23×T**
15794218-CA-C 13682338-CA-C 14×A**
59018472-G-T 56872325-G-T **
58987402-G-T 56841255-G-T **
59006310-C-T 56860163-C-T **
13473426-G-A 11317750-G-A **
17584156-TG-T 15472276-TG-T **
27398496-C-A 25252349-C-A P1_g3 **
10899955-C-CAACT **
10899976-C-A **
24300851-G-T 22154704-G-T P3_t1 **
11034801-CTCCTT-C **
10679332-G-A **
10679336-A-C **
10679400-C-T **
14224199-C-A 12103493-C-A **
10763057-A-T **
15138012-CT-C 13026099-CT-C 15×T**
10807054-A-ACTCCT **
19007639-TAC-T 16895759-TAC-T **
11034803-C-A **
10658398-C-A **
8253566-C-A 8385525-C-A **
15358582-C-A 13246701-C-A **
18256230-CAA-C 16144350-CAA-C 12×A**
19183927-C-T 17072047-C-T **
4521586-T-G 4653545-T-G **
10763033-T-C **
10763038-T-TTTTACTCCAC **
10763050-C-T **
10763065-C-T **
15912119-G-T 13800239-G-T **
24300843-G-T 22154696-G-T P3_t1 **
10679321-T-C **
4521601-G-A 4653560-G-A **
10900007-A-T **
9034372-T-TA 9196763-T-TA 11×A**
10900011-C-T **
10958363-C-A **
16933330-C-A 14821450-C-A **
7202118-C-A 7334077-C-A **
17638263-C-A 15526383-C-A **
18855437-A-T 16743557-A-T **
7464019-C-A 7595978-C-A IR1_L **
7464024-C-A 7595983-C-A IR1_L **
8776582-C-T 8908541-C-T **
21614729-TAA-T 19452843-TAA-T 11×A**
11001926-T-C **
15733762-C-A 13621882-C-A **
10964887-A-G **
10964903-A-C **
10973599-T-C **
10973607-C-A **
10776049-C-A **
3411998-G-T 3543957-G-T **
6858592-CTTT-C 6990551-CTTT-C 25×T**
18381693-C-A 16269813-C-A P6_Gap **
11001903-C-A **
10768620-T-C **
56836649-T-CG **
7974730-C-A 8106689-C-A **
10811432-C-T **
7131178-C-A 7263137-C-A **
22615474-C-A 20453588-C-A **
5264286-G-T 5396245-G-T **
17804441-C-T 15692561-C-T **
15619474-C-A 13507594-C-A **
17061684-G-T 14949804-G-T **
6264483-T-G 6396442-T-G IR3_Dst **
9700767-T-G 9863158-T-G IR3_Prx **
10811437-C-G **
8712546-TA-T 8844505-TA-T 11×A**
19351527-C-A 17239647-C-A **
17206553-C-A 15094673-C-A **
5263536-C-A 5395495-C-A **
27570956-G-T 25424809-G-T P1_Y2 **
25556058-G-GTT 23409911-G-GTT P1_gr1 16×T**
10761500-T-A **
19829300-T-TC 17717420-T-TC P5_Prx **
10935591-C-G **
18984015-A-C 16872135-A-C **
11015696-C-A **
14002160-C-A 11881454-C-A Y48849 **
22055315-C-A 19893429-C-A **
16733682-C-A 14621802-C-A **
7270305-A-G 7402264-A-G **
2790263-C-A 2922222-C-A **
10766155-C-A **
10974323-A-T **
13447065-A-T 11291389-A-T **
23045983-C-A 20884097-C-A **
18578098-C-A 16466218-C-A **
16945603-C-A 14833723-C-A **
3759275-C-A 3891234-C-A **
10794227-T-C **
10794260-AATCCAC-T **
14602699-C-A 12490901-C-A **
18406901-C-A 16295021-C-A P6_Gap **
10658433-C-A **
22079390-C-A 19917504-C-A **
7236569-G-T 7368528-G-T **
11652015-C-A **
10935600-T-TAGA **
13932494-C-A 11811788-C-A **
10964870-T-C **
18278058-C-T 16166178-C-T P6_Prx **
6917082-CCA-C 7049041-CCA-C **
24378409-C-A 22232262-C-A **
8556114-C-A 8688073-C-A **
19379621-C-A 17267741-C-A **
9088976-G-T 9251367-G-T **
28689004-C-A 26542857-C-A **
16823760-C-A 14711880-C-A **
14578472-C-A 12466672-C-A **
5524221-C-A 5656180-C-A **
22269686-G-A 20107800-G-A DYZ19 **
6330116-A-AC 6462075-A-AC IR3_Dst **
3804513-C-A 3936472-C-A **
2740447-G-T 2872406-G-T **
2798956-G-T 2930915-G-T **
2847251-C-G 2979210-C-G **
2909227-T-C 3041186-T-C **
2919591-G-T 3051550-G-T **
2942907-C-A 3074866-C-A **
15866732-C-A 13754852-C-A **
10762154-A-C **
15011573-C-A 12899661-C-A **
14470568-C-A 12349837-C-A **
13480548-C-T 11324872-C-T **
5204628-C-A 5336587-C-A **
7990628-C-A 8122587-C-A **
10679406-T-C **
20434783-ATG-A 18272897-ATG-A P5_Dst **
14693519-A-G 12581585-A-G **
18030815-C-A 15918935-C-A **
28772775-C-A 26626628-C-A **
10937439-C-T **
3990662-CT-C 4122621-CT-C **
21550068-C-A 19388182-C-A **
12379483-C-A **
18329044-T-TC 16217164-T-TC P6_Prx **
6780727-C-A 6912686-C-A **
28767124-C-A 26620977-C-A **
10658337-CCATTCCA-C **
10658345-TTCCATTCC-T **
16041879-C-A 13929999-C-A **
10679412-G-T **
16298320-C-A 14186440-C-A **
5035863-G-GA 5167822-G-GA 9×A**
10964843-A-T **
28781014-C-A 26634867-C-A **
2718906-A-G 2850865-A-G **
19926989-G-A 17815109-G-A P5_Prx **
11650640-T-A **
16244999-C-A 14133119-C-A **
24614178-C-A 22468031-C-A P3_t2 19×A**
27398509-T-A 25252362-T-A P1_g3 **
19075439-AAAAC-A 16963559-AAAAC-A 4×AAAC**
10974363-C-A **
7670688-C-A 7802647-C-A **
20914499-A-AC 18752613-A-AC P4_Dst **
17158999-C-T 15047119-C-T **
21639036-TC-T 19477150-TC-T **
21781259-T-TC **
23202864-C-A 21040978-C-A **
7579123-C-A 7711082-C-A **
10869034-A-T **
18480044-A-AAG 16368164-A-AAG P6_Dst **
5609416-C-A 5741375-C-A **
4540615-C-A 4672574-C-A **
10783445-C-A **
28700430-C-A 26554283-C-A **
22816363-T-C 20654477-T-C **
15285904-C-A 13174003-C-A **
2795006-C-A 2926965-C-A **
7464027-G-A 7595986-G-A IR1_L **
21240485-C-A 19078599-C-A **
24472465-G-T 22326318-G-T **
5459830-C-T 5591789-C-T **
23790316-A-T 21628430-A-T **
13471197-G-T 11315521-G-T **
19926998-A-G 17815118-A-G P5_Prx **
9700768-G-A 9863159-G-A IR3_Prx **
15496914-C-A 13385034-C-A **
13471187-C-A 11315511-C-A **
7206842-C-A 7338801-C-A **
7990788-C-A 8122747-C-A **
15178997-T-G 13067083-T-G **
11003198-C-A **
23317700-G-T 21155814-G-T **
23831281-GAC-G 21669395-GAC-G ***
58976150-C-A 56830003-C-A ***
58976144-C-A 56829997-C-A ***
13479029-C-A,G 11323353-C-A,G ***
4521625-A-G 4653584-A-G ***
19187441-A-G,T 17075561-A-G,T ***
6776478-C-A 6908437-C-A ***
13480292-G-A 11324616-G-A ***
13484421-G-T 11328745-G-T ***
13868894-T-C 11748188-T-C BY38664 ***
13476043-A-T 11320367-A-T ***
2783642-GAAA-G 2915601-GAAA-G 15×A***
13801427-T-C 11680721-T-C ***
13470700-A-C 11315024-A-C ***
24013847-CTATATATATATATATATATATATATATATATA-C 21867700-CTATATATATATATATATATATATATATATATA-C 21×TA***
58974627-A-G 56828480-A-G ***
13194310-C-A 11038634-C-A ***
13194308-T-A 11038632-T-A ***
58985675-C-T 56839528-C-T ***
8501598-C-T 8633557-C-T ***
13809064-T-G 11688358-T-G ***
21224799-G-T 19062913-G-T ***
13841285-G-T 11720579-G-T ***
23005233-C-A 20843347-C-A ***
18959205-A-C 16847325-A-C ***
22689174-TA-T 20527288-TA-T 10×A******
28801591-T-C 26655444-T-C ***
11648378-T-A ***
21775341-G-T 19613455-G-T ***
13684860-T-TAGAGG 11529184-T-TAGAGG ***
10958328-C-A ***
58979577-G-T 56833430-G-T ***
10958352-T-G ***
13728476-C-A 11572800-C-A ***
22079690-C-A 19917804-C-A ***
22147283-C-A 19985397-C-A ***
8425692-A-T 8557651-A-T ***
13460428-C-G 11304752-C-G ***
22214585-G-T 20052699-G-T ***
13478994-C-G 11323318-C-G ***
13478991-C-T 11323315-C-T ***
13478947-T-A 11323271-T-A ***
13478944-G-T 11323268-G-T ***
13448944-C-G 11293268-C-G ***
13811059-G-A 11690353-G-A ***
58982238-C-A 56836091-C-A ***
58979025-C-A 56832878-C-A ***
58978997-A-T 56832850-A-T ***
13841286-G-C 11720580-G-C ***
15746835-C-A 13634955-C-A ***
13456066-T-TTCCAC 11300390-T-TTCCAC ***
18656309-TTG-T 16544429-TTG-T ***
6293362-TG-T 6425321-TG-T IR3_Dst ***
9934990-A-G 10097381-A-G ***
27829239-G-T 25683092-G-T P1_Y2 ***
28741335-C-A 26595188-C-A ***
19453727-C-A 17341847-C-A ***
28784668-T-A 26638521-T-A ***
21143298-CTT-C 18981412-CTT-C 15×T***
13483004-C-G 11327328-C-G ***
13830733-T-G 11710027-T-G ***
56829971-TCCAATCCATT-T,TCCAATCCATG ***
56831016-C-G,T ***
13827148-A-C 11706442-A-C ***
11017665-C-A,G ***
56834582-C-T ***
19631096-C-A 17519216-C-A P5_Prx ***
56837990-C-T ***
58827276-G-A 56763595-C-T ***
58982185-C-T 56836038-C-T ***
23590750-C-A 21428864-C-A ******
13453303-C-A 11297627-C-A ***
13479468-T-G 11323792-T-G ***
13349694-A-G 11194018-A-G ***
13450099-C-T 11294423-C-T ***
13488312-C-A 11332636-C-A ***
13457422-G-T 11301746-G-T ***
2862892-C-A 2994851-C-A 18×A***
7136245-C-A 7268204-C-A 14×A***
14405177-C-A 12284474-C-A ***
22079695-C-A 19917809-C-A ***
21623869-C-A 19461983-C-A ***
14385213-C-A 12264509-C-A ***
13448805-A-T 11293129-A-T ***
18703927-GGA-G 16592047-GGA-G 9×GA***
10825656-C-G ***
25995070-GGA-G,GAA 23848923-GGA-G,GAA P1_Y1 ***
15969954-CAT-C 13858074-CAT-C ***
12294870-AAT-A ***
28801300-G-A 26655153-G-A ***
13830725-G-A 11710019-G-A ***
13140124-CG-C,T 10629610-CG-C,T ***
11014488-A-G ***
13803251-T-A 11682545-T-A ***
11015873-C-T ***
8266732-GA-G 8398691-GA-G 11×A***
13488372-C-A 11332696-C-A ***
3467395-AT-A 3599354-AT-A ***
13830737-A-G 11710031-A-G ***
2835624-G-TT 2967583-G-TT ***
11015904-A-G ***
10017431-G-A 10179822-G-A ***
16104375-CTTTTTTT-C 13992495-CTTTTTTT-C P8_Prx 19×T***
13460475-A-G 11304799-A-G ***
10888022-C-T ***
7126022-C-A 7257981-C-A ***
19091406-G-GTT 16979526-G-GTT 14×T***
11014493-A-T ***
7112573-C-A 7244532-C-A ***
56834592-G-A ***
15677922-T-C 13566042-T-C ***
22023223-A-T 19861337-A-T ***
9371457-CATATAT-C,CATAT 9533848-CATATAT-C,CATAT 22×AT***
11014343-A-T ***
14483885-C-A 12363154-C-A ***
9927746-C-A 10090137-C-A ***
14638697-C-A 12526766-C-A ***
7028316-T-C 7160275-T-C ***
11643668-G-A ***
21971660-GAA-G 19809774-GAA-G 11×A***
6931550-G-A 7063509-G-A ***
14754100-A-T 12642169-A-T ***
7619077-C-A 7751036-C-A ***
7623439-TAAAA-T 7755398-TAAAA-T 14×A***
22919364-G-T 20757478-G-T ***
56831008-A-AT ***
2862875-C-A 2994834-C-A ***
23242988-G-T 21081102-G-T ***
19337658-G-T 17225778-G-T ***
16309570-TC-T 14197690-TC-T ***
15479982-G-T 13368102-G-T ***
21224817-G-T 19062931-G-T ***
56829987-C-A ***
11643658-G-A ***
16478359-C-A 14366479-C-A 18×A***
10009369-G-A 10171760-G-A ***
7256110-AAT-AAA,T 7388069-AAT-AAA,T ***
14071379-TG-T 11950673-TG-T ***
18186036-C-A 16074156-C-A ***
13479201-A-C 11323525-A-C ***
14720257-C-A 12608325-C-A ***
10657367-C-A ***
21839957-A-T 19678071-A-T ***
10024417-C-T 10186808-C-T ***
17606322-C-A 15494442-C-A ***
17673136-A-T 15561256-A-T ***
56836096-C-T ***
13473400-C-A 11317724-C-A ***
17850237-C-A 15738357-C-A ***
9077196-G-T 9239587-G-T ***
13473411-T-G 11317735-T-G ***
13465916-A-T 11310240-A-T ***
15686957-C-A 13575077-C-A ***
8631410-GC-T 8763369-GC-T ***
19071687-T-C 16959807-T-C ***
13453348-C-G 11297672-C-G ***
21582348-C-T 19420462-C-T ***
56834642-G-A ***
10791155-G-T ***
19520871-G-A 17408991-G-A ***
21092209-TG-G,T 18930323-TG-G,T ***
10987794-C-A ***
27829225-C-T 25683078-C-T P1_Y2 ***
56833292-A-G ***
9013247-G-A 9175638-G-A ***
56833321-C-T ***
5219428-C-A 5351387-C-A ***
7974610-T-C 8106569-T-C ***
14604614-A-T 12492816-A-T ***
11014401-C-T ***
7142784-C-A 7274743-C-A ***
18723909-G-T 16612029-G-T ***
10657487-G-T ***
15773405-C-T 13661525-C-T ***
10944106-TTTCCA-T ***
10954055-C-A ***
13842666-T-C 11721960-T-C ***
59004440-AC-A 56858293-AC-A ***
58979547-A-G 56833400-A-G ***
21148586-T-A 18986700-T-A ***
10669458-C-CCTCTA ***
10809167-C-A ***
10958325-A-G ***
56836048-G-T ***
56832846-G-GTCCAT ***
56836050-TGA-T ***
19187411-TTTG-G,TTTT 17075531-TTTG-G,TTTT ***
9847316-TTG-T 10009707-TTG-T ***
56827246-C-G ***
13485591-T-G 11329915-T-G ***
6629127-C-A 6761086-C-A ***
16078345-A-T 13966465-A-T ***
19303631-A-G 17191751-A-G ***
19319814-C-A 17207934-C-A ***
17332729-C-A 15220849-C-A ***
10682548-A-T ***
8188497-C-A 8320456-C-A ***
18384489-TCA-T 16272609-TCA-T P6_Gap ***
13885890-G-T 11765184-G-T ***
13460516-C-A 11304840-C-A ***
7874161-C-T 8006120-C-T ***
7957055-G-T 8089014-G-T ***
22536837-A-T 20374951-A-T ***
10992897-A-T ***
56832766-A-T ***
10793098-T-C ***
7990125-G-T 8122084-G-T ***
15906505-C-A 13794625-C-A ***
36491-G-T ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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