Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > Z195/S355 > Z272 > S450 > Z295/S1217 > S25783 > CTS4065 > 15548847GACAC-G > FGC15710 > CTS10029 > FGC29721 > FGC29724 > 22473581-T-A

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
97920
FGC
BTN5U
25375732-A-C 23229585-A-C FGC29759 P2_r2 +*
21557916-G-T 19396030-G-T FGC29751 Y14486 YY+*
19358641-T-C 17246761-T-C FGC29750 YY+
14706392-G-GTCATAC 12594458-G-GTCATAC +*
16210588-T-C 14098708-T-C FGC29740 Y+
7107009-C-A 7238968-C-A **
13449890-T-TG 11294214-T-TG **
22790465-A-G 20628579-A-G CTS10818 **
13255665-C-T 11099989-C-T **
13255676-C-T 11100000-C-T **
13255687-C-T 11100011-C-T **
13281347-T-C 11125671-T-C **
14991085-G-A 12879170-G-A **
58882105-G-C 56708766-C-G ***
16647535-T-TG 14535655-T-TG ***
58882128-C-G 56708743-G-C ***
58882143-T-C 56708728-A-G ***
58882157-C-A 56708714-G-T ***
58882098-A-C 56708773-T-G ***
58884710-A-C 56706161-T-G ***
58882170-G-T 56708701-C-A ***
58879263-C-A 56711608-G-T ***
58882097-T-C 56708774-A-G ***
58879273-C-G 56711598-G-C ***
58879264-A-G 56711607-T-C ***
58879258-C-T 56711613-G-A ***
58879240-A-T 56711631-T-A ***
58879214-T-C 56711657-A-G ***
58879211-C-T 56711660-G-A ***
58872495-A-C 56718376-T-G ***
58872488-G-T 56718383-C-A ***
58870794-T-A 56720077-A-T ***
58870026-G-C 56720845-C-G ***
58868647-G-T 56722224-C-A ***
58884721-C-A 56706150-G-T ***
58891661-C-A 56699210-G-T ***
58884745-G-C 56706126-C-G ***
58909291-G-T 56681580-C-A ***
13529783-T-TA 11374107-T-TA 16×A***
22248389-TTC-GTG 20086503-TTC-GTG DYZ19 ***
13142409-CCA-C 10631895-CCA-C ***
22852199-CT-C 20690313-CT-C 16×T***
58916241-T-C 56674630-A-G ***
58916217-C-T 56674654-G-A ***
58915677-C-A 56675194-G-T ***
58915673-A-T 56675198-T-A ***
58915661-G-C 56675210-C-G ***
58909299-T-C 56681572-A-G ***
58909297-A-T 56681574-T-A ***
58909265-C-G 56681606-G-C ***
58890838-T-C 56700033-A-G ***
58906504-T-C 56684367-A-G ***
58906500-T-A 56684371-A-T ***
58906496-A-T 56684375-T-A ***
58906359-G-C 56684512-C-G ***
58904227-G-C 56686644-C-G ***
58903652-A-C 56687219-T-G ***
58903499-G-T 56687372-C-A ***
58891680-A-C 56699191-T-G ***
58891666-T-A 56699205-A-T ***
58861642-G-T 56729229-C-A ***
58891630-A-G 56699241-T-C ***
58863389-G-T 56727482-C-A ***
58857147-A-T 56733724-T-A ***
58858625-C-T 56732246-G-A ***
27318717-G-C 25172570-G-C P1_g3 ***
27908997-C-T 25762850-C-T P1_Y2 ***
27900467-T-C 25754320-T-C P1_Y2 ***
27780200-A-G 25634053-A-G P1_Y2 ***
27636752-T-C 25490605-T-C P1_Y2 ***
27636741-C-T 25490594-C-T P1_Y2 ***
27636740-C-G 25490593-C-G P1_Y2 ***
27547505-T-G 25401358-T-G P1_Y2 ***
27524691-G-C 25378544-G-C P1_Y2 ***
27422863-C-A 25276716-C-A P1_g3 ***
27422857-C-T 25276710-C-T P1_g3 ***
27422848-A-T 25276701-A-T P1_g3 ***
27318722-A-G 25172575-A-G P1_g3 ***
27318711-T-A 25172564-T-A P1_g3 ***
27980980-T-A 25834833-T-A P1_Y2 ***
27306085-C-T 25159938-C-T P1_g3 ***
27306084-C-T 25159937-C-T P1_g3 ***
27306080-C-T 25159933-C-T P1_g3 ***
27296562-C-G 25150415-C-G P1_g3 ***
27156383-T-G 25010236-T-G P1_g3 ***
26943809-A-G 24797662-A-G P1_r3 ***
26924585-A-G 24778438-A-G P1_r3 ***
26874630-A-G 24728483-A-G P1_r3 ***
26421483-T-A 24275336-T-A P1_Y1 ***
26362411-T-C 24216264-T-C P1_Y1 ***
26362394-A-C 24216247-A-C P1_Y1 ***
26311695-T-C 24165548-T-C P1_Y1 ***
27909001-T-A 25762854-T-A P1_Y2 ***
27980983-T-C 25834836-T-C P1_Y2 ***
58858622-G-C 56732249-C-G ***
58845284-T-C 56745587-A-G ***
2665141-CAAAAAA-C 2797100-CAAAAAA-C 19×A***
58854312-G-A 56736559-C-T ***
58852497-A-C 56738374-T-G ***
58852492-C-T 56738379-G-A ***
58852475-A-T 56738396-T-A ***
58849450-T-C 56741421-A-G ***
58847882-C-T 56742989-G-A ***
58847799-A-C 56743072-T-G ***
58847254-T-G 56743617-A-C ***
58846770-A-C 56744101-T-G ***
58846769-A-C 56744102-T-G ***
58846086-G-T 56744785-C-A ***
58845244-T-C 56745627-A-G ***
27980984-T-A 25834837-T-A P1_Y2 ***
58838411-T-A 56752460-A-T ***
58836413-A-G 56754458-T-C ***
58832723-T-C 56758148-A-G ***
58832713-G-C 56758158-C-G ***
58832710-G-T 56758161-C-A ***
58832697-G-C 56758174-C-G ***
58828263-C-A 56762608-G-T ***
58828249-A-G 56762622-T-C ***
58827132-C-T 56763739-G-A ***
58821160-C-A 56769711-G-T ***
28022793-T-C 25876646-T-C P1_Y2 ***
27980987-T-A 25834840-T-A P1_Y2 ***
21698309-TAA-T 19536423-TAA-T 24×A***
4583025-G-GTTTTTT 4714984-G-GTTTTTT 27×T***
3079561-T-TAAAAA 3211520-T-TAAAAA 18×A***
23713776-GTGTG-ATATA 21551890-GTGTG-ATATA ***
27908993-C-CA 25762846-C-CA P1_Y2 ***
27746350-ACT-GCA 25600203-ACT-GCA P1_Y2 ***
27746345-C-CAA 25600198-C-CAA P1_Y2 ***
27699703-TATATG-CACA 25553556-TATATG-CACA P1_Y2 ***
27604133-TTCT-CTCC 25457986-TTCT-CTCC P1_Y2 ***
27296566-AG-GC 25150419-AG-GC P1_g3 ***
26874626-A-AG 24728479-A-AG P1_r3 ***
26507952-A-AT 24361805-A-AT P1_Y1 ***
26362405-GG-AA 24216258-GG-AA P1_Y1 ***
25985782-CA-C 23839635-CA-C P1_Y1 ***
24023680-A-AG 21877533-A-AG ***
23364087-CAAAAAAA-C 21202201-CAAAAAAA-C 16×A***
28804532-T-TG 26658385-T-TG ***
22970282-C-CAAAAAA 20808396-C-CAAAAAA 27×A***
22936288-C-CTTTTTT 20774402-C-CTTTTTT 25×T***
22504839-GT-AGGA 20342953-GT-AGGA DYZ19 ***
22496026-CTT-AGG 20334140-CTT-AGG DYZ19 ***
22496000-TGC-GGA 20334114-TGC-GGA DYZ19 ***
22435816-GAG-C 20273930-GAG-C DYZ19 ***
22420863-ATTCT-CTTCA 20258977-ATTCT-CTTCA DYZ19 ***
22367157-AGTG-TGTT 20205271-AGTG-TGTT DYZ19 ***
22354656-AGGTTC-A 20192770-AGGTTC-A DYZ19 ***
22354653-GGC-AGA 20192767-GGC-AGA DYZ19 ***
22354645-TGTC-T 20192759-TGTC-T DYZ19 ***
22344457-AG-A 20182571-AG-A DYZ19 ***
28539174-C-CAAAAAAA 26393027-C-CAAAAAAA 20×A***
28819359-TTC-T 26673212-TTC-T ***
22236716-TAC-CG 20074830-TAC-CG DYZ19 ***
58891586-GTGAAATTTCG-ATGACATTCCA 56699275-CGAAATTTCAC-TGGAATGTCAT ***
59007432-CTTTTTT-C 56861285-CTTTTTT-C 18×T***
58984212-TGCC-T 56838065-TGCC-T ***
58977568-TTCATTTCCATTGCATTCCATCCCAC-T 56831421-TTCATTTCCATTGCATTCCATCCCAC-T ***
58917655-TCNNNNN-T ***
58916616-GC-CG 56674254-GC-CG ***
58916605-ACC-TGA 56674264-GGT-TCA ***
58915706-CAATAG-AAGAAAGTTCC 56675160-CTATTG-GGAACTTTCTT ***
58909237-TG-T 56681632-AC-A ***
58904194-CTCT-GTCC 56686674-AGAG-GGAC ***
58904176-CCATTCAA-GCAGTCTT 56686688-TTGAATGG-AAGACTGC ***
58903648-TTTCA-ATTCC 56687219-TGAAA-GGAAT ***
58890613-CTTTATTCCAGGCCT-GTCCATTTCACACCA 56700244-AGGCCTGGAATAAAG-TGGTGTGAAATGGAC ***
58821110-CC-AT 56769760-GG-AT ***
58879247-TCTA-T 56711620-ATAG-A ***
58879240-ATTCGA-TTTC 56711626-TCGAAT-GAAA ***
58872390-CCGT-C 56718477-TACG-T ***
58870534-TTTCCA-AT 56720332-TGGAAA-AT ***
58863578-ATTCCATTT-TTTGCCTTC 56727285-AAATGGAAT-GAAGGCAAA ***
58863564-TTCGAA-ATAGAT 56727302-TTCGAA-ATCTAT ***
58863551-CGATTG-ACAGTC 56727315-CAATCG-GACTGT ***
58852481-TCA-GCC 56738388-TGA-GGC ***
58847167-GTCTCTTCACTTCG-TTGCATTCCATTCC 56743691-CGAAGTGAAGAGAC-GGAATGGAATGCAA ***
58832664-GTTCG-ATTCC 56758203-CGAAC-GGAAT ***
58832649-GTTCG-TTTCC 56758218-CGAAC-GGAAA ***
58825305-GAT-CAG 56765564-ATC-CTG ***
22344146-ATGG-CCGA 20182260-ATGG-CCGA DYZ19 ***
21853677-C-CAAA 19691791-C-CAAA 43×A***
3991945-A-AACACACACAC 4123904-A-AACACACACAC 12×AC***
9224225-TT-AG 9386616-TT-AG ***
13140105-CTTTCCAATCCATTAA-C 10629591-CTTTCCAATCCATTAA-C ***
13140089-CATTAAATCAGAATTCCTT-C 10629575-CATTAAATCAGAATTCCTT-C ***
13140075-AGTGCGTGTGATTCCATTAAATCAGAATTCCT-A 10629561-AGTGCGTGTGATTCCATTAAATCAGAATTCCT-A ***
10092424-GTCC-ATCA 10254815-GTCC-ATCA ***
10092414-TGCTT-GACTC 10254805-TGCTT-GACTC ***
10092384-ATG-TTA 10254775-ATG-TTA ***
10092375-TATA-CATG 10254766-TATA-CATG ***
10090710-AG-GC 10253101-AG-GC ***
10084449-AGAGG-CGATC 10246840-AGAGG-CGATC ***
10015016-CAGAGTC-TGGGGTT 10177407-CAGAGTC-TGGGGTT ***
9665481-T-CC 9827872-T-CC IR3_Prx ***
9147329-A-AAACACG 9309720-A-AAACACG ***
13223091-AAGA-GAG 11067415-AAGA-GAG ***
8773858-CAAAAAA-C 8905817-CAAAAAA-C 16×A***
6293347-C-CTTTTTTT 6425306-C-CTTTTTTT IR3_Dst 15×T***
6179592-ATTTTTTTTTT-A 6311551-ATTTTTTTTTT-A IR3_Dst 22×T***
6089764-GTTTTTTTTTTTTTTTT-G 6221723-GTTTTTTTTTTTTTTTT-G 31×T***
5479897-TGTG-AGCA 5611856-TGTG-AGCA ***
5479888-TGAG-CAAT 5611847-TGAG-CAAT ***
5227083-CAAGC-AAAAA 5359042-CAAGC-AAAAA ***
5130497-G-GGTTTTTTTTGGGGTT 5262456-G-GGTTTTTTTTGGGGTT 24×T***
5097348-C-CTTTTT 5229307-C-CTTTTT 26×T***
4763712-C-TTT 4895671-C-TTT ***
26216067-T-C 24069920-T-C P1_Y1 ***
4090858-GTC-TTG 4222817-GTC-TTG ***
13140127-ACTCC-A 10629613-ACTCC-A ***
13267778-C-CCCCA 11112102-C-CCCCA ***
20127567-G-GA 18015687-G-GA P5_Dst ***
14680794-GA-G 12568860-GA-G 15×A***
20104244-A-AAAGAGGG 17992364-A-AAAGAGGG P5_Dst 13×G***
19853736-ATG-A 17741856-ATG-A P5_Prx ***
17872639-CTTTT-C 15760759-CTTTT-C 17×T***
17828086-G-GTT 15716206-G-GTT 12×T***
16938218-C-CTTTTTTTTTT 14826338-C-CTTTTTTTTTT 19×T***
16908473-GAAAG-AAAAA 14796593-GAAAG-AAAAA ***
16169495-TCGGGAGGCAGG-GAGGAAGGGAGGC 14057615-TCGGGAGGCAGG-GAGGAAGGGAGGC ***
16018288-AAAAAAC-A 13906408-AAAAAAC-A ***
15622588-CCTC-ACT 13510708-CCTC-ACT ***
15291340-GT-C 13179439-GT-C ***
14704487-T-TAA 12592553-T-TAA ***
14698458-C-CAAAAAAAAA 12586524-C-CAAAAAAAAA 19×A***
14613459-C-CTTTT 12501657-C-CTTTT 26×T***
13459714-C-CCACTG 11304038-C-CCACTG ***
13869816-GTGGAATGGAA-G 11749110-GTGGAATGGAA-G 10×TGGAA***
13864532-AATTGAATGGTAT-A 11743826-AATTGAATGGTAT-A ***
13864526-GAATAGAATTGAATGGTATGTCATTGAA-G 11743820-GAATAGAATTGAATGGTATGTCATTGAA-G ***
13703159-CGGAG-TGGAA 11547483-CGGAG-TGGAA ***
13585053-CAA-C 11429377-CAA-C 19×A***
13486299-TGCCTCCAG-AGCCCCCA 11330623-TGCCTCCAG-AGCCCCCA ***
13485025-TACAACAGC-GACGAGAGT 11329349-TACAACAGC-GACGAGAGT ***
13472103-CACCC-TGCCT 11316427-CACCC-TGCCT ***
13465780-AAATGC-CAATA 11310104-AAATGC-CAATA ***
13463860-CACGCGGGA-GACGTGGGG 11308184-CACGCGGGA-GACGTGGGG ***
13463831-TATACCGTTT-AATAAACGGTC 11308155-TATACCGTTT-AATAAACGGTC ***
13463630-TA-AT 11307954-TA-AT ***
26311677-C-T 24165530-C-T P1_Y1 ***
25950556-A-G 23804409-A-G P1_Y1 ***
26188405-T-G 24042258-T-G P1_Y1 ***
6142276-C-A 6274235-C-A IR3_Dst ***
59006878-CAA-C 56860731-CAA-C ***
58842303-A-C 56748568-T-G ***
58859194-ATG-TTC 56731675-CAT-GAA ***
22342198-GCAT-TCAC 20180312-GCAT-TCAC DYZ19 ***
6142327-TAGAA-CAGAC 6274286-TAGAA-CAGAC IR3_Dst ***
6142261-CTCCCAC-AAACCA 6274220-CTCCCAC-AAACCA IR3_Dst ***
58843715-A-C 56747156-T-G ***
22342184-C-T 20180298-C-T DYZ19 ***
6142300-A-C 6274259-A-C IR3_Dst ***
6142289-G-A 6274248-G-A IR3_Dst ***
6142283-T-C 6274242-T-C IR3_Dst ***
27699715-TACAG-CACAC 25553568-TACAG-CACAC P1_Y2 ***
22308404-G-C 20146518-G-C DYZ19 ***
58892707-C-G 56698164-G-C ***
58845275-A-C 56745596-T-G ***
58907164-GCTCTCTG-CCTTTGGA 56683700-CAGAGAGC-TCCAAAGG ***
58872407-TTTTGAA-ATTCGAT 56718458-TTCAAAA-ATCGAAT ***
13864531-GAATTGAATGGTATGTCATT-G 11743825-GAATTGAATGGTATGTCATT-G ***
58847305-A-C 56743566-T-G ***
58842270-C-A 56748601-G-T ***
58820373-T-A 56770498-A-T ***
13742834-C-T 11587158-C-T ***
13735087-T-G 11579411-T-G ***
13703175-T-G 11547499-T-G ***
22354576-C-A 20192690-C-A DYZ19 ***
13104553-N-G 10594039-N-G ***
24491349-C-T 22345202-C-T ***
5460694-T-G 5592653-T-G ***
10092369-T-A 10254760-T-A ***
10090534-T-A 10252925-T-A ***
9665468-A-G 9827859-A-G IR3_Prx ***
9607709-T-C 9770100-T-C IR3_Prx 11×TG***
9342740-C-A 9505131-C-A ***
9330716-T-C 9493107-T-C ***
9224229-G-C 9386620-G-C ***
8181234-C-T 8313193-C-T ***
6771696-T-C 6903655-T-C ***
5479772-C-A 5611731-C-A ***
5479759-G-T 5611718-G-T ***
5107036-A-C 5238995-A-C ***
13104549-N-T 10594035-N-T ***
4662209-T-C 4794168-T-C ***
3428594-A-G 3560553-A-G ***
3315345-C-G 3447304-C-G ***
3052599-C-A 3184558-C-A ***
22354653-G-A 20192767-G-A DYZ19 ***
5475928-A-G 5607887-A-G ***
24207516-A-C 22061369-A-C FGC38958 P3_b1 ***
58917504-T-G 56673367-A-C ***
22241406-T-C 20079520-T-C DYZ19 ***
26386989-C-A 24240842-C-A P1_Y1 ***
28804531-A-G 26658384-A-G ***
22322619-T-C 20160733-T-C DYZ19 ***
22505106-TT-CG 20343220-TT-CG DYZ19 ***
22241408-T-C 20079522-T-C DYZ19 ***
10092408-T-G 10254799-T-G ***
22256931-GTGG-TTGT 20095045-GTGG-TTGT DYZ19 ***
10090698-A-G 10253089-A-G ***
58977570-CATTTCCATTG-C 56831423-CATTTCCATTG-C ***
22332925-A-C 20171039-A-C DYZ19 ***
10090711-G-C 10253102-G-C ***
13140073-CGAGTGCGTGTGATTCCATTAAATCAG-C 10629559-CGAGTGCGTGTGATTCCATTAAATCAG-C ***
58872413-A-T 56718458-T-A ***
22504827-T-G 20342941-T-G DYZ19 ***
15294122-A-C 13182221-A-C ***
13703156-C-G 11547480-C-G ***
10084309-A-T 10246700-A-T ***
22241410-A-T 20079524-A-T DYZ19 ***
22256922-TTC-GTG 20095036-TTC-GTG DYZ19 ***
20118722-C-G 18006842-C-G P5_Dst ***
13474828-A-G 11319152-A-G ***
13258279-C-G 11102603-C-G ***
22342845-ATCC-GTCT 20180959-ATCC-GTCT DYZ19 ***
58874521-G-T 56716350-C-A ***
28819293-G-A 26673146-G-A ***
58874519-T-C 56716352-A-G ***
22263780-G-A 20101894-G-A DYZ19 ***
13470658-CT-GA 11314982-CT-GA ***
22344334-G-C 20182448-G-C DYZ19 ***
13734082-T-C 11578406-T-C ***
19949713-C-T 17837833-C-T P5_Prx ***
20118706-T-C 18006826-T-C P5_Dst ***
20118672-CCTCGGGCAT-C 18006792-CCTCGGGCAT-C P5_Dst ***
58915718-TTCCT-GTCCA 56675149-AGGAA-TGGAC ***
13564768-C-T 11409092-C-T ***
58872337-GTGCTATTCAA-ATTCGATTTAG 56718524-TTGAATAGCAC-CTAAATCGAAT ***
58843627-TTCCTTTCCATTCCAGCC-GTCCATTGCTTTCGAGTG 56747227-GGCTGGAATGGAAAGGAA-CACTCGAAAGCAATGGAC ***
58824631-TTT-AAG 56766238-AAA-CTT ***
13460231-CTG-ATT 11304555-CTG-ATT ***
58843612-T-G 56747259-A-C ***
58843240-G-C 56747631-C-G ***
13470235-G-A 11314559-G-A ***
26463097-C-CTTTTT 24316950-C-CTTTTT P1_Y1 36×T***
22366693-C-T 20204807-C-T DYZ19 ***
22459191-TC-T 20297305-TC-T DYZ19 ******
22220082-C-T 20058196-C-T DYZ19 ***
9614976-A-G 9777367-A-G IR3_Prx ***
13488459-A-T 11332783-A-T ***
6347753-G-A 6479712-G-A ***
13728272-C-A 11572596-C-A ***
13484540-G-A 11328864-G-A ***
28784344-CGC-TGG 26638197-CGC-TGG ***
22343913-TT-AC 20182027-TT-AC DYZ19 ***
58874476-ATAGATTC-TTACATTG 56716388-GAATCTAT-CAATGTAA ***
22354872-T-TG 20192986-T-TG DYZ19 ***
13488501-AG-CA 11332825-AG-CA ***
13474824-A-G 11319148-A-G ***
13488477-CGCGCAGTCAGG-TGCATAGGCAGA 11332801-CGCGCAGTCAGG-TGCATAGGCAGA ***
13488450-GCAG-TCAC 11332774-GCAG-TCAC ***
22256959-TTT-CTC 20095073-TTT-CTC DYZ19 ***
10092397-A-C 10254788-A-C ***
10092432-G-A 10254823-G-A ***
26188401-T-A 24042254-T-A P1_Y1 ***
22311628-G-A 20149742-G-A DYZ19 ***
22343278-A-T 20181392-A-T DYZ19 ***
22342981-G-C 20181095-G-C DYZ19 ***
22342946-T-G 20181060-T-G DYZ19 ***
22342495-A-G 20180609-A-G DYZ19 ***
22342431-C-T 20180545-C-T DYZ19 ***
22337858-G-A 20175972-G-A DYZ19 ***
22329391-G-A 20167505-G-A DYZ19 ***
22316285-T-C 20154399-T-C DYZ19 ***
22316284-A-C 20154398-A-C DYZ19 ***
22316282-T-G 20154396-T-G DYZ19 ***
22316271-G-A 20154385-G-A DYZ19 ***
22309241-C-G 20147355-C-G DYZ19 ***
22349275-G-A 20187389-G-A DYZ19 ***
22257246-G-T 20095360-G-T DYZ19 ***
22256877-G-A 20094991-G-A DYZ19 ***
22248171-G-T 20086285-G-T DYZ19 ***
22232344-T-A 20070458-T-A DYZ19 ***
22232001-C-A 20070115-C-A DYZ19 ***
22227679-C-A 20065793-C-A DYZ19 ***
20946341-C-T 18784455-C-T P4_Dst ***
20946340-A-C 18784454-A-C P4_Dst ***
20931039-A-T 18769153-A-T P4_Dst ***
20931031-C-T 18769145-C-T P4_Dst ***
20664500-C-A 18502614-C-A P4_Prx ***
22343287-T-C 20181401-T-C DYZ19 ***
22354655-C-A 20192769-C-A DYZ19 ***
20538347-G-A 18376461-G-A P5_Dst ***
23121063-G-T 20959177-G-T ***
26188397-C-G 24042250-C-G P1_Y1 ***
26050706-T-G 23904559-T-G P1_Y1 ***
25985791-C-T 23839644-C-T P1_Y1 ***
25985788-T-C 23839641-T-C P1_Y1 ***
13458777-T-G 11303101-T-G ***
24579830-C-G 22433683-C-G P3_t2 ***
24579826-G-T 22433679-G-T P3_t2 ***
24562513-C-G 22416366-C-G P3_t2 ***
24513495-G-A 22367348-G-A ***
24016996-T-A 21870849-T-A ***
24016991-T-A 21870844-T-A ***
22535383-C-T 20373497-C-T ***
22356740-G-A 20194854-G-A DYZ19 ***
22505128-G-T 20343242-G-T DYZ19 ***
22504615-T-C 20342729-T-C DYZ19 ***
22503948-G-A 20342062-G-A DYZ19 ***
22503506-T-G 20341620-T-G DYZ19 ***
22449712-G-T 20287826-G-T DYZ19 ***
22449711-A-C 20287825-A-C DYZ19 ***
22449709-C-A 20287823-C-A DYZ19 ***
22435868-T-A 20273982-T-A DYZ19 ***
22421758-T-C 20259872-T-C DYZ19 ***
22357800-T-A 20195914-T-A DYZ19 ***
22356837-T-C 20194951-T-C DYZ19 ***
22356836-C-T 20194950-C-T DYZ19 ***
20569340-T-G 18407454-T-G P5_Dst ***
20371039-T-G 18209153-T-G P5_Dst ***
13109782-G-C 10599268-G-C ***
13703181-A-G 11547505-A-G ***
15671650-G-A 13559770-G-A ***
15070472-G-A 12958563-G-A ***
14671405-C-G 12559471-C-G ***
13747514-T-C 11591838-T-C ***
13747509-G-C 11591833-G-C ***
13745999-G-A 11590323-G-A ***
13745994-A-G 11590318-A-G ***
13745991-T-G 11590315-T-G ***
13745966-T-A 11590290-T-A ***
13735090-A-T 11579414-A-T ***
13734131-G-C 11578455-G-C ***
13697816-A-T 11542140-A-T ***
16169495-T-G 14057615-T-G ***
13489598-C-A 11333922-C-A ***
13488488-G-A 11332812-G-A ***
13463615-A-G 11307939-A-G ***
13430405-G-T 11274729-G-T ***
13365086-C-A 11209410-C-A ***
13358595-C-T 11202919-C-T ***
13257894-G-T 11102218-G-T ***
13223177-T-A 11067501-T-A ***
13223147-G-A 11067471-G-A ***
13222999-G-A 11067323-G-A ***
13115432-C-G 10604918-C-G ***
13110094-A-T 10599580-A-T ***
16101343-C-G 13989463-C-G P8_Prx ***
16169496-C-A 14057616-C-A ***
20371037-G-T 18209151-G-T P5_Dst ***
19854256-A-T 17742376-A-T P5_Prx ***
20371036-G-T 18209150-G-T P5_Dst ***
20371034-G-A 18209148-G-A P5_Dst ***
20227961-A-G 18066075-A-G P5_Dst ***
20227960-A-T 18066074-A-T P5_Dst ***
20227954-C-T 18066068-C-T P5_Dst ***
20127573-T-C 18015693-T-C P5_Dst ***
20045609-A-G 17933729-A-G P5_Prx ***
20045606-A-T 17933726-A-T P5_Prx ***
20045605-A-G 17933725-A-G P5_Prx ***
19951249-G-T 17839369-G-T P5_Prx ***
19949725-C-G 17837845-C-G P5_Prx ***
19822555-A-C 17710675-A-C P5_Prx ***
16169499-G-A 14057619-G-A ***
19822554-A-C 17710674-A-C P5_Prx ***
19822553-C-G 17710673-C-G P5_Prx ***
19759582-T-C 17647702-T-C P5_Prx ***
19759578-T-G 17647698-T-G P5_Prx ***
19746897-G-T 17635017-G-T P5_Prx ***
19746883-T-A 17635003-T-A P5_Prx 13×TG***
19727758-T-C 17615878-T-C P5_Prx ***
19727743-T-C 17615863-T-C P5_Prx ***
19702455-G-T 17590575-G-T P5_Prx ***
18380238-G-T 16268358-G-T P6_Prx ***
18330343-T-A 16218463-T-A P6_Prx ***
16169503-C-G 14057623-C-G ***
59013637-TATTTTTTTTT-AATATATATATA 56867490-TATTTTTTTTT-AATATATATATA ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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