Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > Z195/S355 > Z272 > S450 > Z295/S1217 > S25783 > CTS4065 > 15548847GACAC-G > FGC15710 > CTS10029 > FGC29721 > FGC29724 > 22473581-T-A

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
97920
FGC
BTN5U
25375732-A-C 23229585-A-C FGC29759 P2_r2 +*
21557916-G-T 19396030-G-T FGC29751 Y14486 YY+*
14706392-G-GTCATAC 12594458-G-GTCATAC +*
19358641-T-C 17246761-T-C FGC29750 YY+
16210588-T-C 14098708-T-C FGC29740 Y+
18596061-AAC-A 16484181-AAC-A 16×AC**
13281347-T-C 11125671-T-C **
14991085-G-A 12879170-G-A **
7107009-C-A 7238968-C-A **
13449890-T-TG 11294214-T-TG **
22790465-A-G 20628579-A-G CTS10818 **
13255687-C-T 11100011-C-T **
13255665-C-T 11099989-C-T **
13255676-C-T 11100000-C-T **
5234764-CT-C 5366723-CT-C 19×T***
58891630-A-G 56699241-T-C ***
58890838-T-C 56700033-A-G ***
58884745-G-C 56706126-C-G ***
21698309-TAA-T 19536423-TAA-T 24×A***
58884721-C-A 56706150-G-T ***
58884710-A-C 56706161-T-G ***
58882170-G-T 56708701-C-A ***
58882157-C-A 56708714-G-T ***
58882143-T-C 56708728-A-G ***
58882128-C-G 56708743-G-C ***
2665141-CAAAAAA-C 2797100-CAAAAAA-C 19×A***
58891666-T-A 56699205-A-T ***
58882105-G-C 56708766-C-G ***
3079561-T-TAAAAA 3211520-T-TAAAAA 18×A***
58882098-A-C 56708773-T-G ***
58882097-T-C 56708774-A-G ***
58879273-C-G 56711598-G-C ***
58879264-A-G 56711607-T-C ***
58879263-C-A 56711608-G-T ***
58879258-C-T 56711613-G-A ***
58879240-A-T 56711631-T-A ***
58879214-T-C 56711657-A-G ***
58879211-C-T 56711660-G-A ***
58891661-C-A 56699210-G-T ***
58903499-G-T 56687372-C-A ***
58891680-A-C 56699191-T-G ***
58915673-A-T 56675198-T-A ***
3481514-C-CA 3613473-C-CA 12×A***
24244600-C-CT 22098453-C-CT P3_b1 19×T***
13529783-T-TA 11374107-T-TA 16×A***
22248389-TTC-GTG 20086503-TTC-GTG DYZ19 ***
28613771-CT-C 26467624-CT-C 16×T***
13142409-CCA-C 10631895-CCA-C ***
16904720-AAG-A 14792840-AAG-A ***
22852199-CT-C 20690313-CT-C 16×T***
58916241-T-C 56674630-A-G ***
58916217-C-T 56674654-G-A ***
58915677-C-A 56675194-G-T ***
58915661-G-C 56675210-C-G ***
28691900-TA-T 26545753-TA-T 13×A***
58909299-T-C 56681572-A-G ***
58909297-A-T 56681574-T-A ***
58909291-G-T 56681580-C-A ***
58909265-C-G 56681606-G-C ***
58906504-T-C 56684367-A-G ***
58906500-T-A 56684371-A-T ***
58872488-G-T 56718383-C-A ***
58906496-A-T 56684375-T-A ***
58906359-G-C 56684512-C-G ***
58904227-G-C 56686644-C-G ***
58903652-A-C 56687219-T-G ***
58872495-A-C 56718376-T-G ***
58868647-G-T 56722224-C-A ***
58870794-T-A 56720077-A-T ***
27422848-A-T 25276701-A-T P1_g3 ***
27980983-T-C 25834836-T-C P1_Y2 ***
27980980-T-A 25834833-T-A P1_Y2 ***
27909001-T-A 25762854-T-A P1_Y2 ***
27908997-C-T 25762850-C-T P1_Y2 ***
27900467-T-C 25754320-T-C P1_Y2 ***
27780200-A-G 25634053-A-G P1_Y2 ***
27636752-T-C 25490605-T-C P1_Y2 ***
27636741-C-T 25490594-C-T P1_Y2 ***
27636740-C-G 25490593-C-G P1_Y2 ***
27547505-T-G 25401358-T-G P1_Y2 ***
27524691-G-C 25378544-G-C P1_Y2 ***
27422863-C-A 25276716-C-A P1_g3 ***
27422857-C-T 25276710-C-T P1_g3 ***
27318722-A-G 25172575-A-G P1_g3 ***
27980987-T-A 25834840-T-A P1_Y2 ***
27318717-G-C 25172570-G-C P1_g3 ***
27318711-T-A 25172564-T-A P1_g3 ***
27306085-C-T 25159938-C-T P1_g3 ***
27306084-C-T 25159937-C-T P1_g3 ***
27306080-C-T 25159933-C-T P1_g3 ***
27296562-C-G 25150415-C-G P1_g3 ***
27156383-T-G 25010236-T-G P1_g3 ***
26943809-A-G 24797662-A-G P1_r3 ***
26924585-A-G 24778438-A-G P1_r3 ***
26874630-A-G 24728483-A-G P1_r3 ***
26421483-T-A 24275336-T-A P1_Y1 ***
26362411-T-C 24216264-T-C P1_Y1 ***
26362394-A-C 24216247-A-C P1_Y1 ***
27980984-T-A 25834837-T-A P1_Y2 ***
28022793-T-C 25876646-T-C P1_Y2 ***
58870026-G-C 56720845-C-G ***
58847254-T-G 56743617-A-C ***
4090858-GTC-TTG 4222817-GTC-TTG ***
58863389-G-T 56727482-C-A ***
58861642-G-T 56729229-C-A ***
58858625-C-T 56732246-G-A ***
58858622-G-C 56732249-C-G ***
58857147-A-T 56733724-T-A ***
58854312-G-A 56736559-C-T ***
58852497-A-C 56738374-T-G ***
58852492-C-T 56738379-G-A ***
58852475-A-T 56738396-T-A ***
58849450-T-C 56741421-A-G ***
58847882-C-T 56742989-G-A ***
58847799-A-C 56743072-T-G ***
58846770-A-C 56744101-T-G ***
58821160-C-A 56769711-G-T ***
58846769-A-C 56744102-T-G ***
58846086-G-T 56744785-C-A ***
58845284-T-C 56745587-A-G ***
58845244-T-C 56745627-A-G ***
58838411-T-A 56752460-A-T ***
58836413-A-G 56754458-T-C ***
58832723-T-C 56758148-A-G ***
58832713-G-C 56758158-C-G ***
58832710-G-T 56758161-C-A ***
58832697-G-C 56758174-C-G ***
58828263-C-A 56762608-G-T ***
58828249-A-G 56762622-T-C ***
58827132-C-T 56763739-G-A ***
3991945-A-AACACACACAC 4123904-A-AACACACACAC 12×AC***
5227083-CAAGC-AAAAA 5359042-CAAGC-AAAAA ***
4583025-G-GTTTTTT 4714984-G-GTTTTTT 27×T***
23364087-CAAAAAAA-C 21202201-CAAAAAAA-C 16×A***
27746350-ACT-GCA 25600203-ACT-GCA P1_Y2 ***
27746345-C-CAA 25600198-C-CAA P1_Y2 ***
27733713-CA-C 25587566-CA-C P1_Y2 26×A***
27699703-TATATG-CACA 25553556-TATATG-CACA P1_Y2 ***
27604133-TTCT-CTCC 25457986-TTCT-CTCC P1_Y2 ***
27296566-AG-GC 25150419-AG-GC P1_g3 ***
26874626-A-AG 24728479-A-AG P1_r3 ***
26507952-A-AT 24361805-A-AT P1_Y1 ***
26362405-GG-AA 24216258-GG-AA P1_Y1 ***
25985782-CA-C 23839635-CA-C P1_Y1 ***
24023680-A-AG 21877533-A-AG ***
23713776-GTGTG-ATATA 21551890-GTGTG-ATATA ***
22970282-C-CAAAAAA 20808396-C-CAAAAAA 27×A***
28539174-C-CAAAAAAA 26393027-C-CAAAAAAA 20×A***
22936288-C-CTTTTTT 20774402-C-CTTTTTT 25×T***
22504839-GT-AGGA 20342953-GT-AGGA DYZ19 ***
22496026-CTT-AGG 20334140-CTT-AGG DYZ19 ***
22496000-TGC-GGA 20334114-TGC-GGA DYZ19 ***
22435816-GAG-C 20273930-GAG-C DYZ19 ***
22420863-ATTCT-CTTCA 20258977-ATTCT-CTTCA DYZ19 ***
22367157-AGTG-TGTT 20205271-AGTG-TGTT DYZ19 ***
22354656-AGGTTC-A 20192770-AGGTTC-A DYZ19 ***
22354653-GGC-AGA 20192767-GGC-AGA DYZ19 ***
22354645-TGTC-T 20192759-TGTC-T DYZ19 ***
22344457-AG-A 20182571-AG-A DYZ19 ***
22344146-ATGG-CCGA 20182260-ATGG-CCGA DYZ19 ***
22236716-TAC-CG 20074830-TAC-CG DYZ19 ***
27908993-C-CA 25762846-C-CA P1_Y2 ***
28804532-T-TG 26658385-T-TG ***
20127567-G-GA 18015687-G-GA P5_Dst ***
58891586-GTGAAATTTCG-ATGACATTCCA 56699275-CGAAATTTCAC-TGGAATGTCAT ***
59013637-TATTTTTTTTT-AATATATATATA 56867490-TATTTTTTTTT-AATATATATATA ***
59007432-CTTTTTT-C 56861285-CTTTTTT-C 18×T***
58984212-TGCC-T 56838065-TGCC-T ***
58979996-CCACT-C 56833849-CCACT-C ***
58977568-TTCATTTCCATTGCATTCCATCCCAC-T 56831421-TTCATTTCCATTGCATTCCATCCCAC-T ***
58917655-TCNNNNN-T ***
58916616-GC-CG 56674254-GC-CG ***
58916605-ACC-TGA 56674264-GGT-TCA ***
58915706-CAATAG-AAGAAAGTTCC 56675160-CTATTG-GGAACTTTCTT ***
58909237-TG-T 56681632-AC-A ***
58904194-CTCT-GTCC 56686674-AGAG-GGAC ***
58904176-CCATTCAA-GCAGTCTT 56686688-TTGAATGG-AAGACTGC ***
58903648-TTTCA-ATTCC 56687219-TGAAA-GGAAT ***
58890613-CTTTATTCCAGGCCT-GTCCATTTCACACCA 56700244-AGGCCTGGAATAAAG-TGGTGTGAAATGGAC ***
28819359-TTC-T 26673212-TTC-T ***
58879247-TCTA-T 56711620-ATAG-A ***
58879240-ATTCGA-TTTC 56711626-TCGAAT-GAAA ***
58872390-CCGT-C 56718477-TACG-T ***
58870534-TTTCCA-AT 56720332-TGGAAA-AT ***
58863578-ATTCCATTT-TTTGCCTTC 56727285-AAATGGAAT-GAAGGCAAA ***
58863564-TTCGAA-ATAGAT 56727302-TTCGAA-ATCTAT ***
58863551-CGATTG-ACAGTC 56727315-CAATCG-GACTGT ***
58852481-TCA-GCC 56738388-TGA-GGC ***
58847167-GTCTCTTCACTTCG-TTGCATTCCATTCC 56743691-CGAAGTGAAGAGAC-GGAATGGAATGCAA ***
58832664-GTTCG-ATTCC 56758203-CGAAC-GGAAT ***
58832649-GTTCG-TTTCC 56758218-CGAAC-GGAAA ***
58825305-GAT-CAG 56765564-ATC-CTG ***
58821110-CC-AT 56769760-GG-AT ***
21853677-C-CAAA 19691791-C-CAAA 43×A***
20104244-A-AAAGAGGG 17992364-A-AAAGAGGG P5_Dst 13×G***
4763712-C-TTT 4895671-C-TTT ***
10015016-CAGAGTC-TGGGGTT 10177407-CAGAGTC-TGGGGTT ***
13252394-A-AT 11096718-A-AT 11×T***
13223091-AAGA-GAG 11067415-AAGA-GAG ***
13140127-ACTCC-A 10629613-ACTCC-A ***
13140105-CTTTCCAATCCATTAA-C 10629591-CTTTCCAATCCATTAA-C ***
13140089-CATTAAATCAGAATTCCTT-C 10629575-CATTAAATCAGAATTCCTT-C ***
13140075-AGTGCGTGTGATTCCATTAAATCAGAATTCCT-A 10629561-AGTGCGTGTGATTCCATTAAATCAGAATTCCT-A ***
10092424-GTCC-ATCA 10254815-GTCC-ATCA ***
10092414-TGCTT-GACTC 10254805-TGCTT-GACTC ***
10092384-ATG-TTA 10254775-ATG-TTA ***
10092375-TATA-CATG 10254766-TATA-CATG ***
10090710-AG-GC 10253101-AG-GC ***
10084449-AGAGG-CGATC 10246840-AGAGG-CGATC ***
9968339-GTT-G 10130730-GTT-G 15×T***
13267778-C-CCCCA 11112102-C-CCCCA ***
9665481-T-CC 9827872-T-CC IR3_Prx ***
9224225-TT-AG 9386616-TT-AG ***
9147329-A-AAACACG 9309720-A-AAACACG ***
8773858-CAAAAAA-C 8905817-CAAAAAA-C 16×A***
8702810-G-GTT 8834769-G-GTT 21×T***
6293347-C-CTTTTTTT 6425306-C-CTTTTTTT IR3_Dst 15×T***
6179592-ATTTTTTTTTT-A 6311551-ATTTTTTTTTT-A IR3_Dst 22×T***
6089764-GTTTTTTTTTTTTTTTT-G 6221723-GTTTTTTTTTTTTTTTT-G 31×T***
5479897-TGTG-AGCA 5611856-TGTG-AGCA ***
5479888-TGAG-CAAT 5611847-TGAG-CAAT ***
26311677-C-T 24165530-C-T P1_Y1 ***
5130497-G-GGTTTTTTTTGGGGTT 5262456-G-GGTTTTTTTTGGGGTT 24×T***
5097348-C-CTTTTT 5229307-C-CTTTTT 26×T***
13260592-CTT-C 11104916-CTT-C 14×T***
13459714-C-CCACTG 11304038-C-CCACTG ***
19853736-ATG-A 17741856-ATG-A P5_Prx ***
14698458-C-CAAAAAAAAA 12586524-C-CAAAAAAAAA 19×A***
18196490-C-CA 16084610-C-CA 26×A***
17872639-CTTTT-C 15760759-CTTTT-C 17×T***
17828086-G-GTT 15716206-G-GTT 12×T***
16938218-C-CTTTTTTTTTT 14826338-C-CTTTTTTTTTT 19×T***
16908473-GAAAG-AAAAA 14796593-GAAAG-AAAAA ***
16297330-GT-G 14185450-GT-G 26×T***
16169495-TCGGGAGGCAGG-GAGGAAGGGAGGC 14057615-TCGGGAGGCAGG-GAGGAAGGGAGGC ***
16018288-AAAAAAC-A 13906408-AAAAAAC-A ***
15778648-CTTT-C 13666768-CTTT-C 15×T***
15622588-CCTC-ACT 13510708-CCTC-ACT ***
15545225-G-GA 13433345-G-GA 10×A***
15291340-GT-C 13179439-GT-C ***
14704487-T-TAA 12592553-T-TAA ***
14680794-GA-G 12568860-GA-G 15×A***
13463630-TA-AT 11307954-TA-AT ***
14613459-C-CTTTT 12501657-C-CTTTT 26×T***
13976083-CAAA-C 11855377-CAAA-C 15×A***
13869816-GTGGAATGGAA-G 11749110-GTGGAATGGAA-G 10×TGGAA***
13864532-AATTGAATGGTAT-A 11743826-AATTGAATGGTAT-A ***
13864526-GAATAGAATTGAATGGTATGTCATTGAA-G 11743820-GAATAGAATTGAATGGTATGTCATTGAA-G ***
13703159-CGGAG-TGGAA 11547483-CGGAG-TGGAA ***
13585053-CAA-C 11429377-CAA-C 19×A***
13486299-TGCCTCCAG-AGCCCCCA 11330623-TGCCTCCAG-AGCCCCCA ***
13485025-TACAACAGC-GACGAGAGT 11329349-TACAACAGC-GACGAGAGT ***
13472103-CACCC-TGCCT 11316427-CACCC-TGCCT ***
13465780-AAATGC-CAATA 11310104-AAATGC-CAATA ***
13463860-CACGCGGGA-GACGTGGGG 11308184-CACGCGGGA-GACGTGGGG ***
13463831-TATACCGTTT-AATAAACGGTC 11308155-TATACCGTTT-AATAAACGGTC ***
26311695-T-C 24165548-T-C P1_Y1 ***
25985788-T-C 23839641-T-C P1_Y1 ***
26216067-T-C 24069920-T-C P1_Y1 ***
58892707-C-G 56698164-G-C ***
58842303-A-C 56748568-T-G ***
58859194-ATG-TTC 56731675-CAT-GAA ***
22342198-GCAT-TCAC 20180312-GCAT-TCAC DYZ19 ***
6142327-TAGAA-CAGAC 6274286-TAGAA-CAGAC IR3_Dst ***
6142261-CTCCCAC-AAACCA 6274220-CTCCCAC-AAACCA IR3_Dst ***
58843715-A-C 56747156-T-G ***
22342184-C-T 20180298-C-T DYZ19 ***
6142300-A-C 6274259-A-C IR3_Dst ***
6142289-G-A 6274248-G-A IR3_Dst ***
6142283-T-C 6274242-T-C IR3_Dst ***
6142276-C-A 6274235-C-A IR3_Dst ***
27699715-TACAG-CACAC 25553568-TACAG-CACAC P1_Y2 ***
58845275-A-C 56745596-T-G ***
22354576-C-A 20192690-C-A DYZ19 ***
58907164-GCTCTCTG-CCTTTGGA 56683700-CAGAGAGC-TCCAAAGG ***
58872407-TTTTGAA-ATTCGAT 56718458-TTCAAAA-ATCGAAT ***
13864531-GAATTGAATGGTATGTCATT-G 11743825-GAATTGAATGGTATGTCATT-G ***
58847305-A-C 56743566-T-G ***
58842270-C-A 56748601-G-T ***
58820373-T-A 56770498-A-T ***
13742834-C-T 11587158-C-T ***
13735087-T-G 11579411-T-G ***
13703175-T-G 11547499-T-G ***
22505106-TT-CG 20343220-TT-CG DYZ19 ***
24491349-C-T 22345202-C-T ***
22241408-T-C 20079522-T-C DYZ19 ***
59006878-CAA-C 56860731-CAA-C ***
22308404-G-C 20146518-G-C DYZ19 ***
58872337-GTGCTATTCAA-ATTCGATTTAG 56718524-TTGAATAGCAC-CTAAATCGAAT ***
4662209-T-C 4794168-T-C ***
9665468-A-G 9827859-A-G IR3_Prx ***
9607709-T-C 9770100-T-C IR3_Prx 11×TG***
9571907-G-T 9734298-G-T IR3_Prx ***
9342740-C-A 9505131-C-A ***
9330716-T-C 9493107-T-C ***
9224229-G-C 9386620-G-C ***
8181234-C-T 8313193-C-T ***
6771696-T-C 6903655-T-C ***
5479772-C-A 5611731-C-A ***
5479759-G-T 5611718-G-T ***
5460694-T-G 5592653-T-G ***
5107036-A-C 5238995-A-C ***
3428594-A-G 3560553-A-G ***
13104553-N-G 10594039-N-G ***
3315345-C-G 3447304-C-G ***
3052599-C-A 3184558-C-A ***
22354653-G-A 20192767-G-A DYZ19 ***
5475928-A-G 5607887-A-G ***
24207516-A-C 22061369-A-C FGC38958 P3_b1 ***
58917504-T-G 56673367-A-C ***
22420410-C-T 20258524-C-T DYZ19 ***
22241406-T-C 20079520-T-C DYZ19 ***
26386989-C-A 24240842-C-A P1_Y1 ***
28804531-A-G 26658384-A-G ***
13472118-C-T 11316442-C-T ***
22322619-T-C 20160733-T-C DYZ19 ***
13104549-N-T 10594035-N-T ***
58915718-TTCCT-GTCCA 56675149-AGGAA-TGGAC ***
58843627-TTCCTTTCCATTCCAGCC-GTCCATTGCTTTCGAGTG 56747227-GGCTGGAATGGAAAGGAA-CACTCGAAAGCAATGGAC ***
10092369-T-A 10254760-T-A ***
13258279-C-G 11102603-C-G ***
22332925-A-C 20171039-A-C DYZ19 ***
10090711-G-C 10253102-G-C ***
13140073-CGAGTGCGTGTGATTCCATTAAATCAG-C 10629559-CGAGTGCGTGTGATTCCATTAAATCAG-C ***
58872413-A-T 56718458-T-A ***
22504827-T-G 20342941-T-G DYZ19 ***
15294122-A-C 13182221-A-C ***
13703156-C-G 11547480-C-G ***
10084309-A-T 10246700-A-T ***
22241410-A-T 20079524-A-T DYZ19 ***
22256931-GTGG-TTGT 20095045-GTGG-TTGT DYZ19 ***
22256922-TTC-GTG 20095036-TTC-GTG DYZ19 ***
13474828-A-G 11319152-A-G ***
22342845-ATCC-GTCT 20180959-ATCC-GTCT DYZ19 ***
10090698-A-G 10253089-A-G ***
28503399-CA-C 26357252-CA-C 19×A***
58874521-G-T 56716350-C-A ***
28819293-G-A 26673146-G-A ***
21558722-CA-C 19396836-CA-C 16×A***
58874519-T-C 56716352-A-G ***
22263780-G-A 20101894-G-A DYZ19 ***
13470658-CT-GA 11314982-CT-GA ***
22344334-G-C 20182448-G-C DYZ19 ***
23223307-C-A 21061421-C-A 35×A***
13734082-T-C 11578406-T-C ***
19829454-A-AT 17717574-A-AT P5_Prx 12×T***
19949713-C-T 17837833-C-T P5_Prx ***
13458777-T-G 11303101-T-G ***
58977570-CATTTCCATTG-C 56831423-CATTTCCATTG-C ***
20118706-T-C 18006826-T-C P5_Dst ***
58824631-TTT-AAG 56766238-AAA-CTT ***
14266305-GTATA-G 12145599-GTATA-G 14×TA***
13460231-CTG-ATT 11304555-CTG-ATT ***
58843612-T-G 56747259-A-C ***
58843240-G-C 56747631-C-G ***
13470235-G-A 11314559-G-A ***
26463097-C-CTTTTT 24316950-C-CTTTTT P1_Y1 36×T***
22366693-C-T 20204807-C-T DYZ19 ***
4201382-G-GA 4333341-G-GA 11×A***
22459191-TC-T 20297305-TC-T DYZ19 ******
22220082-C-T 20058196-C-T DYZ19 ***
13564768-C-T 11409092-C-T ***
9614976-A-G 9777367-A-G IR3_Prx ***
6347753-G-A 6479712-G-A ***
13728272-C-A 11572596-C-A ***
20118722-C-G 18006842-C-G P5_Dst ***
13484540-G-A 11328864-G-A ***
28784344-CGC-TGG 26638197-CGC-TGG ***
22343913-TT-AC 20182027-TT-AC DYZ19 ***
58874476-ATAGATTC-TTACATTG 56716388-GAATCTAT-CAATGTAA ***
22354872-T-TG 20192986-T-TG DYZ19 ***
13488501-AG-CA 11332825-AG-CA ***
2758842-C-CA 2890801-C-CA 19×A***
13474824-A-G 11319148-A-G ***
13488477-CGCGCAGTCAGG-TGCATAGGCAGA 11332801-CGCGCAGTCAGG-TGCATAGGCAGA ***
13488450-GCAG-TCAC 11332774-GCAG-TCAC ***
22256959-TTT-CTC 20095073-TTT-CTC DYZ19 ***
13488459-A-T 11332783-A-T ***
20118672-CCTCGGGCAT-C 18006792-CCTCGGGCAT-C P5_Dst ***
10090534-T-A 10252925-T-A ***
10092397-A-C 10254788-A-C ***
26188405-T-G 24042258-T-G P1_Y1 ***
22309241-C-G 20147355-C-G DYZ19 ***
22342981-G-C 20181095-G-C DYZ19 ***
22342946-T-G 20181060-T-G DYZ19 ***
22342495-A-G 20180609-A-G DYZ19 ***
22342431-C-T 20180545-C-T DYZ19 ***
22337858-G-A 20175972-G-A DYZ19 ***
22329391-G-A 20167505-G-A DYZ19 ***
22316288-A-G 20154402-A-G DYZ19 ***
22316285-T-C 20154399-T-C DYZ19 ***
22316284-A-C 20154398-A-C DYZ19 ***
22316282-T-G 20154396-T-G DYZ19 ***
22316271-G-A 20154385-G-A DYZ19 ***
22311628-G-A 20149742-G-A DYZ19 ***
22257246-G-T 20095360-G-T DYZ19 ***
22343287-T-C 20181401-T-C DYZ19 ***
22256877-G-A 20094991-G-A DYZ19 ***
22248171-G-T 20086285-G-T DYZ19 ***
22232344-T-A 20070458-T-A DYZ19 ***
22232001-C-A 20070115-C-A DYZ19 ***
22227679-C-A 20065793-C-A DYZ19 ***
20946341-C-T 18784455-C-T P4_Dst ***
20946340-A-C 18784454-A-C P4_Dst ***
20931039-A-T 18769153-A-T P4_Dst ***
20931031-C-T 18769145-C-T P4_Dst ***
20664500-C-A 18502614-C-A P4_Prx ***
20569340-T-G 18407454-T-G P5_Dst ***
20538347-G-A 18376461-G-A P5_Dst ***
20371039-T-G 18209153-T-G P5_Dst ***
22343278-A-T 20181392-A-T DYZ19 ***
22349275-G-A 20187389-G-A DYZ19 ***
20371036-G-T 18209150-G-T P5_Dst ***
23121063-G-T 20959177-G-T ***
26188401-T-A 24042254-T-A P1_Y1 ***
26188397-C-G 24042250-C-G P1_Y1 ***
26050706-T-G 23904559-T-G P1_Y1 ***
25985791-C-T 23839644-C-T P1_Y1 ***
16647535-T-TG 14535655-T-TG ***
25950556-A-G 23804409-A-G P1_Y1 ***
24579830-C-G 22433683-C-G P3_t2 ***
24579826-G-T 22433679-G-T P3_t2 ***
24562513-C-G 22416366-C-G P3_t2 ***
24513495-G-A 22367348-G-A ***
24016996-T-A 21870849-T-A ***
24016991-T-A 21870844-T-A ***
22535383-C-T 20373497-C-T ***
22354655-C-A 20192769-C-A DYZ19 ***
22505128-G-T 20343242-G-T DYZ19 ***
22504615-T-C 20342729-T-C DYZ19 ***
22503948-G-A 20342062-G-A DYZ19 ***
22503506-T-G 20341620-T-G DYZ19 ***
22449712-G-T 20287826-G-T DYZ19 ***
22449711-A-C 20287825-A-C DYZ19 ***
22449709-C-A 20287823-C-A DYZ19 ***
22435868-T-A 20273982-T-A DYZ19 ***
22421758-T-C 20259872-T-C DYZ19 ***
22357800-T-A 20195914-T-A DYZ19 ***
22356837-T-C 20194951-T-C DYZ19 ***
22356836-C-T 20194950-C-T DYZ19 ***
22356740-G-A 20194854-G-A DYZ19 ***
20371037-G-T 18209151-G-T P5_Dst ***
20371034-G-A 18209148-G-A P5_Dst ***
10092408-T-G 10254799-T-G ***
13478285-G-A 11322609-G-A ***
13747514-T-C 11591838-T-C ***
13747509-G-C 11591833-G-C ***
13745999-G-A 11590323-G-A ***
13745994-A-G 11590318-A-G ***
13745991-T-G 11590315-T-G ***
13745966-T-A 11590290-T-A ***
13735090-A-T 11579414-A-T ***
13734131-G-C 11578455-G-C ***
13703181-A-G 11547505-A-G ***
13697816-A-T 11542140-A-T ***
13489598-C-A 11333922-C-A ***
13488488-G-A 11332812-G-A ***
13463615-A-G 11307939-A-G ***
15070472-G-A 12958563-G-A ***
13430405-G-T 11274729-G-T ***
13398180-G-C 11242504-G-C ***
13384985-G-A 11229309-G-A ***
13365086-C-A 11209410-C-A ***
13358595-C-T 11202919-C-T ***
13257894-G-T 11102218-G-T ***
13223177-T-A 11067501-T-A ***
13223147-G-A 11067471-G-A ***
13222999-G-A 11067323-G-A ***
13115432-C-G 10604918-C-G ***
13110094-A-T 10599580-A-T ***
13109782-G-C 10599268-G-C ***
10092432-G-A 10254823-G-A ***
14671405-C-G 12559471-C-G ***
15622559-T-C 13510679-T-C ***
20227961-A-G 18066075-A-G P5_Dst ***
19759582-T-C 17647702-T-C P5_Prx ***
20227960-A-T 18066074-A-T P5_Dst ***
20227954-C-T 18066068-C-T P5_Dst ***
20127573-T-C 18015693-T-C P5_Dst ***
20045609-A-G 17933729-A-G P5_Prx ***
20045606-A-T 17933726-A-T P5_Prx ***
20045605-A-G 17933725-A-G P5_Prx ***
19951249-G-T 17839369-G-T P5_Prx ***
19949725-C-G 17837845-C-G P5_Prx ***
19854256-A-T 17742376-A-T P5_Prx ***
19822555-A-C 17710675-A-C P5_Prx ***
19822554-A-C 17710674-A-C P5_Prx ***
19822553-C-G 17710673-C-G P5_Prx ***
19759578-T-G 17647698-T-G P5_Prx ***
15622576-G-C 13510696-G-C ***
19746897-G-T 17635017-G-T P5_Prx ***
19746883-T-A 17635003-T-A P5_Prx 13×TG***
19727758-T-C 17615878-T-C P5_Prx ***
19727743-T-C 17615863-T-C P5_Prx ***
19702455-G-T 17590575-G-T P5_Prx ***
18380238-G-T 16268358-G-T P6_Prx ***
18330343-T-A 16218463-T-A P6_Prx ***
16169503-C-G 14057623-C-G ***
16169499-G-A 14057619-G-A ***
16169496-C-A 14057616-C-A ***
16169495-T-G 14057615-T-G ***
16101343-C-G 13989463-C-G P8_Prx ***
15671650-G-A 13559770-G-A ***
59013638-ATTTTT-A 56867491-ATTTTT-A 11×T***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Haplotype Progression

The data below reveals the progression of changes in the haplotype. The bottom row is the haplotype for this man and above him are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are very much a work in progress, and any suggested modifications are appreciated. I think we can use our vast collection of haplotype data to refine these haplotypes. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

DYS393
DYS390
DYS19
DYS391
DYS385
DYS426
DYS388
DYS439
DYS389i
DYS392
DYS389ii
DYS458
DYS459
DYS455
DYS454
DYS447
DYS437
DYS448
DYS449
DYS464
DYS460
Y-GATA-H4
YCAII
DYS456
DYS607
DYS576
DYS570
CDY
DYS442
DYS438
DYS531
DYS578
DYF395S1
DYS590
DYS537
DYS641
DYS472
DYF406S1
DYS511
DYS425
DYS413
DYS557
DYS594
DYS436
DYS490
DYS534
DYS450
DYS444
DYS481
DYS520
DYS446
DYS617
DYS568
DYS487
DYS572
DYS640
DYS492
DYS565
DYS710
DYS485
DYS632
DYS495
DYS540
DYS714
DYS716
DYS717
DYS505
DYS556
DYS549
DYS589
DYS522
DYS494
DYS533
DYS636
DYS575
DYS638
DYS462
DYS452
DYS445
Y-GATA-A10
DYS463
DYS441
Y-GGAAT-1B07
DYS525
DYS712
DYS593
DYS650
DYS532
DYS715
DYS504
DYS513
DYS561
DYS552
DYS726
DYS635
DYS587
DYS643
DYS497
DYS510
DYS434
DYS461
DYS435
P312/S1161324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123315916122626191211131210912121011113012132413101020151913241712152412231810141791211
Zenker1325151111-141212121313291610-1011112514183015-15-17-17111019-231715171837-38121211915-1681011810111223-2316101212148122320131211151111121232159161226281912111212109121210111130121223131011211519132417121524122318101416101211

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 979201071126377481837821379
Kit: BTN5U*16000000100000008300000
Used in age calculations16000000100000008300000
Counts of SNPs32
Variant counts last updated 2017-12-13 11:34:44.

* BED data not available. Using default values.


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