Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > ZZ10 > Z253 > Z2534 > ~22280136-C-G > FGC5618 > L226 > FGC5660 > Z17669 > ZZ31 > FGC5628 > FGC5659 > ZZ34 > DC33 > ~22427459-T-A > Y5610

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
30225
BigY2
30225
20677009-A-C 18515123-A-C P4_Prx ***A*
13688965-T-A 11533289-T-A +
28796287-C-T 26650140-C-T ***+
13815358-G-T 11694652-G-T ++
14603896-G-T 12492098-G-T YY++
16251075-C-G 14139195-C-G YY++
16424326-G-A 14312446-G-A Y**+
23236478-G-A 21074592-G-A Y++
9490224-AG-A 9652615-AG-A ++
10869581-A-C **
11013581-G-T **
10993104-A-C **
10993137-C-A **
10993178-C-G **
10999609-C-A **
11004426-A-ACTGTAGACAG **
11004436-A-T **
11004455-C-G **
11004460-C-G **
11019153-C-T **
10992389-C-A **
11021117-C-A **
11028177-T-G **
11032449-G-A **
11032454-T-A **
13195916-C-A 11040240-C-A **
13268905-G-A 11113229-G-A **
13294220-A-T 11138544-A-T **
13441572-A-G 11285896-A-G **
13457691-C-T 11302015-C-T **
10992424-T-G **
10987724-C-A **
10879991-C-G **
10845853-C-A **
10880422-C-G **
10883972-C-A **
10887870-A-C **
10888095-T-A **
10861597-C-T **
10856897-C-T **
10855731-C-T **
10899020-C-A **
10843857-C-A **
10961463-CA-T **
10912949-C-A **
10835420-G-T **
10927950-A-C **
10830998-A-T **
10931620-A-G **
10941804-G-A **
13484634-C-T 11328958-C-T **
10953372-C-A **
10961425-C-CTATCCGATTT **
56850660-T-G **
13597107-C-A 11441431-C-A **
10817469-C-A **
14938596-G-A 12826671-G-A **
14548837-AT-A 12437038-AT-A **
14694355-A-T 12582421-A-T **
14723787-C-A 12611855-C-A **
14762375-C-T 12650444-C-T **
14762379-C-G 12650448-C-G **
14807298-CA-C 12695369-CA-C **
14824768-T-C 12712835-T-C **
14880301-C-A 12768371-C-A **
14882296-C-A 12770364-C-A **
14882317-C-A 12770383-C-A **
14953486-C-G 12841560-C-G **
14543991-C-A 12432192-C-A **
14977414-C-A 12865489-C-A **
14982076-C-A 12870144-C-A **
14986074-G-C 12874142-G-C **
15029519-A-G 12917607-A-G **
15038317-C-T 12926407-C-T **
15107849-C-A 12995936-C-A **
15151529-AAC-A 13039616-AAC-A **
15171252-G-A 13059338-G-A **
15217577-C-A 13105663-C-A **
15222888-T-C 13110974-T-C **
15252736-T-C 13140822-T-C **
14548742-C-A 12436943-C-A **
14531963-G-C 12420164-G-C **
13690800-A-G 11535124-A-G **
14200443-A-C 12079737-A-C **
11653718-A-G **
11657394-C-A **
11676406-A-G **
11677490-C-A **
13883561-AT-A 11762855-AT-A **
13884120-C-A 11763414-C-A **
13908444-A-T 11787738-A-T **
14050674-C-A 11929968-C-A **
14123884-T-G 12003178-T-G **
14147081-C-A 12026375-C-A **
14204866-C-A 12084160-C-A **
14526791-T-A 12414992-T-A **
14279845-A-C 12159139-A-C **
14356298-G-A 12235593-G-A **
14392789-G-T 12272085-G-T **
14419043-C-A 12298318-C-A **
14429298-C-A 12308573-C-A **
14453717-A-G 12332990-A-G **
14457527-G-T 12336800-G-T **
14457538-G-T 12336811-G-T **
14462499-G-T 12341772-G-T **
14462560-C-A 12341833-C-A **
14515206-A-G 12403411-A-G **
10828236-G-C **
10815755-G-C **
10817454-C-T **
8341743-C-A 8473702-C-A **
7925845-G-GT 8057804-G-GT **
7970955-C-A 8102914-C-A **
7983168-C-A 8115127-C-A **
7991429-T-C 8123388-T-C **
8002109-G-A 8134068-G-A **
8025093-G-T 8157052-G-T **
8030154-C-A 8162113-C-A **
8119072-C-A 8251031-C-A **
8140001-A-T 8271960-A-T **
8399247-C-T 8531206-C-T **
7722945-C-A 7854904-C-A **
8558457-C-A 8690416-C-A **
8673846-G-A 8805805-G-A **
8679499-C-A 8811458-C-A **
8686299-C-A 8818258-C-A **
8737084-C-A 8869043-C-A **
8819398-TA-T 8951357-TA-T **
9013020-G-A 9175411-G-A **
9020538-A-G 9182929-A-G **
9068867-A-C 9231258-A-C **
9139112-T-C 9301503-T-C **
7896883-T-C 8028842-T-C **
7705540-C-T 7837499-C-T **
9444427-T-G 9606818-T-G **
7106335-C-T 7238294-C-T **
6981152-T-G 7113111-T-G **
6981154-G-A 7113113-G-A **
6981156-G-A 7113115-G-A **
6981163-C-T 7113122-C-T **
6981175-G-A 7113134-G-A **
7019245-C-A 7151204-C-A **
7082636-C-A 7214595-C-A **
7094258-T-C 7226217-T-C **
7101099-G-A 7233058-G-A **
7101499-C-A 7233458-C-A **
7106346-C-G 7238305-C-G **
7701503-T-A 7833462-T-A **
7106348-C-T 7238307-C-T **
7106356-T-C 7238315-T-C **
7188535-C-A 7320494-C-A **
7221635-C-A 7353594-C-A **
7253865-C-A 7385824-C-A **
7269653-A-G 7401612-A-G **
7448416-G-T 7580375-G-T IR1_L **
7506097-G-T 7638056-G-T IR1_L **
7623467-A-G 7755426-A-G **
7623470-A-G 7755429-A-G **
9440316-C-A 9602707-C-A **
9456702-C-A 9619093-C-A **
10817438-T-A **
10783549-T-G **
10689105-C-T **
10689107-C-G **
10689115-T-G **
10747693-G-C **
10751056-C-CTCCATTCCATTCGAT **
10759003-C-A **
10762983-C-CTCTATTCCAG **
10768130-T-A **
10781190-G-T **
10790940-A-C **
10684146-T-C **
10800865-T-TGGTCCTCTCCACTCCATTCC **
10800887-ATCCAC-A **
10800916-A-C **
10801691-CCATTCCAT-C **
10809069-A-C **
10815692-A-T **
10815709-T-A **
15370102-G-T 13258222-G-T **
10815760-C-T **
10815763-T-C **
10684595-T-A **
10682823-C-A **
9516751-C-CTT 9679142-C-CTT 14×T**
10652917-TGCCA-T **
9516767-AG-A 9679158-AG-A **
9601563-G-A 9763954-G-A IR3_Prx **
9940158-G-C 10102549-G-C **
9980081-T-C 10142472-T-C **
9980383-C-A 10142774-C-A **
10004725-G-A 10167116-G-A **
10011937-C-A 10174328-C-A **
10050987-T-C 10213378-T-C **
10651421-N-C **
10652607-C-A **
10652924-C-CGTTGAATCT **
10682640-G-T **
10652937-T-C **
10654633-G-C **
10654634-A-C **
10654642-T-C **
10655402-A-C **
10661612-T-C **
10663162-G-T **
10667030-A-C **
10678675-T-C **
10679298-A-T **
15324987-A-T 13213105-A-T **
15451479-C-A 13339599-C-A **
15399468-C-A 13287588-C-A **
22522408-C-A 20360522-C-A **
21953592-C-A 19791706-C-A **
22036847-T-C 19874961-T-C **
22095640-C-A 19933754-C-A **
22149816-C-T 19987930-C-T **
22230689-C-A 20068803-C-A DYZ19 **
22240982-T-A 20079096-T-A DYZ19 **
22296104-A-C 20134218-A-C DYZ19 **
22422139-G-C 20260253-G-C DYZ19 **
22522385-C-A 20360499-C-A **
22540397-G-A 20378511-G-A **
21927310-C-A 19765424-C-A **
22542760-C-A 20380874-C-A **
22579986-C-A 20418100-C-A **
22585470-G-A 20423584-G-A **
22587912-C-A 20426026-C-A **
22644794-C-A 20482908-C-A **
22644887-C-A 20483001-C-A **
22658477-C-A 20496591-C-A **
22699035-C-A 20537149-C-A **
22722365-GA-G 20560479-GA-G **
22722368-A-AT 20560482-A-AT **
21946207-A-T 19784321-A-T **
21789783-G-T 19627897-G-T **
22857889-C-A 20696003-C-A **
21068179-G-A 18906293-G-A **
19389686-T-C 17277806-T-C **
19515143-C-A 17403263-C-A **
19792702-C-A 17680822-C-A P5_Prx **
19792743-C-A 17680863-C-A P5_Prx **
20501872-G-T 18339986-G-T P5_Dst **
20603955-A-C 18442069-A-C P5_Dst **
20641646-G-A 18479760-G-A P4_Prx **
20641653-G-A 18479767-G-A P4_Prx **
21037380-C-T 18875494-C-T **
21048987-T-C 18887101-T-C **
21085778-TCAAAA-T 18923892-TCAAAA-T **
21603685-C-A 19441799-C-A **
21130423-TGA-T 18968537-TGA-T **
21132541-C-A 18970655-C-A **
21133301-T-A 18971415-T-A **
21195912-C-A 19034026-C-A **
21220835-C-A 19058949-C-A **
21283464-A-G 19121578-A-G **
21357511-A-T 19195625-A-T **
21486523-C-T 19324637-C-T **
21545334-C-A 19383448-C-A **
21555262-T-C 19393376-T-C **
22800276-C-A 20638390-C-A **
22896001-C-A 20734115-C-A **
19389674-C-CAA 17277794-C-CAA **
28499512-C-A 26353365-C-A **
25395740-G-C 23249593-G-C P2_r2 **
25395797-C-T 23249650-C-T P2_r2 **
25931613-A-T 23785466-A-T P1_Y1 **
25955605-G-T 23809458-G-T P1_Y1 **
26563245-C-A 24417098-C-A P1_g2 **
27842257-A-G 25696110-A-G P1_Y2 **
27842356-A-C 25696209-A-C P1_Y2 **
28462906-C-A 26316759-C-A **
28468746-C-T 26322599-C-T **
28622751-G-A 26476604-G-A **
24523632-C-A 22377485-C-A **
28624110-G-T 26477963-G-T **
28652917-G-T 26506770-G-T **
28762687-T-A 26616540-T-A **
28782722-G-A 26636575-G-A **
28782774-A-T 26636627-A-T **
28798987-G-T 26652840-G-T **
28802634-G-T 26656487-G-T **
28812505-T-A 26666358-T-A **
56848349-C-A **
56850134-TG-T **
24751232-T-G 22605085-T-G P3_b2 **
24500168-G-T 22354021-G-T **
22914502-C-A 20752616-C-A **
23487166-A-C 21325280-A-C **
23002317-A-G 20840431-A-G **
23199756-CC-A 21037870-CC-A **
23343649-C-A 21181763-C-A **
23369707-C-A 21207821-C-A **
23413905-A-G 21252019-A-G **
23420675-C-T 21258789-C-T **
23438242-A-G 21276356-A-G **
23440723-A-G 21278837-A-G **
23465813-T-C 21303927-T-C **
23475465-C-A 21313579-C-A **
23543373-C-A 21381487-C-A **
24456028-C-G 22309881-C-G **
23578606-A-T 21416720-A-T **
23651001-C-A 21489115-C-A **
23853856-A-G 21691970-A-G **
23869739-G-T 21707853-G-T **
23961208-C-A 21815061-C-A **
24070111-C-A 21923964-C-A P3_b1 **
24241284-TAAA-T 22095137-TAAA-T P3_b1 11×A**
24242286-C-A 22096139-C-A P3_b1 **
24328711-A-C 22182564-A-C P3_t1 **
24359681-C-A 22213534-C-A **
19389675-GC-G 17277795-GC-G **
19389657-T-C 17277777-T-C **
15400633-C-A 13288753-C-A **
16999149-C-A 14887269-C-A **
16445540-C-G 14333660-C-G **
16457886-C-A 14346006-C-A **
16465162-T-C 14353282-T-C **
16506619-T-G 14394739-T-G **
16528903-C-A 14417023-C-A **
16540360-A-C 14428480-A-C **
16568215-G-T 14456335-G-T **
16572809-C-A 14460929-C-A **
16942081-C-A 14830201-C-A **
17029401-C-A 14917521-C-A **
16401925-C-A 14290045-C-A **
17033713-C-A 14921833-C-A **
17072967-C-A 14961087-C-A **
17118430-G-T 15006550-G-T **
17170438-A-C 15058558-A-C **
17187335-G-T 15075455-G-T **
17196394-C-A 15084514-C-A **
17271230-C-A 15159350-C-A **
17366904-A-T 15255024-A-T **
17394574-G-T 15282694-G-T **
17448264-A-T 15336384-A-T **
16421066-C-A 14309186-C-A **
16336042-G-A 14224162-G-A **
17575186-G-A 15463306-G-A **
15778623-C-A 13666743-C-A **
15427516-A-T 13315636-A-T **
15442340-C-G 13330460-C-G **
6948253-C-T 7080212-C-T **
15556950-C-A 13445070-C-A **
15622473-C-A 13510593-C-A **
15669961-CCACAA-C 13558081-CCACAA-C **
15677291-G-T 13565411-G-T **
15717783-G-C 13605903-G-C **
15727999-C-A 13616119-C-A **
15750534-G-T 13638654-G-T **
15913897-C-A 13802017-C-A **
16316763-A-T 14204883-A-T **
15932413-C-A 13820533-C-A **
16035782-T-A 13923902-T-A **
16037420-C-A 13925540-C-A **
16060453-C-A 13948573-C-A **
16070115-C-A 13958235-C-A **
16090253-TA-T 13978373-TA-T **
16091259-T-A 13979379-T-A **
16101996-CTTTT-C 13990116-CTTTT-C P8_Prx 19×T**
16176507-C-G 14064627-C-G **
16286499-A-G 14174619-A-G **
17449244-C-A 15337364-C-A **
17580222-A-T 15468342-A-T **
19389656-C-G 17277776-C-G **
18923953-C-T 16812073-C-T **
18564339-A-T 16452459-A-T **
18663455-C-A 16551575-C-A **
18752120-A-G 16640240-A-G **
18752960-G-T 16641080-G-T **
18806079-T-C 16694199-T-C **
18832819-C-A 16720939-C-A **
18873467-C-A 16761587-C-A **
18901218-T-G 16789338-T-G **
18905522-C-A 16793642-C-A **
18923973-C-A 16812093-C-A **
18423804-C-A 16311924-C-A P6_Gap **
18935907-C-A 16824027-C-A **
18955753-C-A 16843873-C-A **
18978754-C-A 16866874-C-A **
19049634-C-A 16937754-C-A **
19050142-C-A 16938262-C-A **
19060821-T-A 16948941-T-A **
19389634-G-T 17277754-G-T **
19389637-G-T 17277757-G-T **
19389642-G-C 17277762-G-C **
19389645-G-A 17277765-G-A **
18539050-C-A 16427170-C-A **
18385610-C-A 16273730-C-A P6_Gap **
17624531-G-T 15512651-G-T **
17946659-A-G 15834779-A-G **
17674594-C-G 15562714-C-G **
17675465-A-G 15563585-A-G **
17703231-A-C 15591351-A-C **
17713907-G-T 15602027-G-T **
17718185-C-A 15606305-C-A **
17812029-G-A 15700149-G-A **
17843058-T-A 15731178-T-A **
17863363-T-A 15751483-T-A **
17908060-C-A 15796180-C-A **
17914973-T-C 15803093-T-C **
17946663-G-A 15834783-G-A **
18384316-A-T 16272436-A-T P6_Gap **
17959347-C-A 15847467-C-A **
18019054-C-A 15907174-C-A **
18039371-T-TA 15927491-T-TA **
18119497-A-T 16007617-A-T **
18174537-C-A 16062657-C-A **
18215794-C-A 16103914-C-A **
18241404-C-A 16129524-C-A **
18249511-C-A 16137631-C-A **
18249716-A-T 16137836-A-T **
18290806-T-C 16178926-T-C P6_Prx **
6981136-A-G 7113095-A-G **
8371843-T-C 8503802-T-C **
6948246-A-G 7080205-A-G **
22598230-C-A 20436344-C-A **
10821874-C-CTCGAT **
24022786-C-A 21876639-C-A **
10821886-C-T **
10821933-A-G **
7269641-A-G 7401600-A-G **
26262370-G-T 24116223-G-T P1_Y1 **
10794564-G-T **
21545406-C-A 19383520-C-A **
7532276-GTATATA-G 7664235-GTATATA-G 28×TA**
26275950-C-T 24129803-C-T P1_Y1 **
2979385-C-A 3111344-C-A **
26153978-G-A 24007831-G-A P1_Y1 **
19257108-AAT-A 17145228-AAT-A 8×AT**
17895197-G-TT 15783317-G-TT **
15280812-C-A 13168911-C-A **
28485911-C-A 26339764-C-A **
10994151-A-C **
11004431-A-T **
15882453-G-T 13770573-G-T **
10652914-G-C **
10801706-C-A **
8134771-C-A 8266730-C-A **
20641604-TGAGAGA-T 18479718-TGAGAGA-T P4_Prx 16×GA**
22801880-C-A 20639994-C-A **
3367102-C-A 3499061-C-A **
18965640-G-T 16853760-G-T **
17170201-A-T 15058321-A-T **
22614358-C-A 20452472-C-A **
27914949-T-A 25768802-T-A P1_Y2 **
24595412-A-T 22449265-A-T P3_t2 **
9601588-T-TA 9763979-T-TA IR3_Prx **
6925647-C-A 7057606-C-A **
18401335-C-A 16289455-C-A P6_Gap **
23807561-A-C 21645675-A-C **
28549873-G-T 26403726-G-T **
13908337-C-A 11787631-C-A **
27607876-G-T 25461729-G-T P1_Y2 **
28802596-T-G 26656449-T-G **
24369474-C-A 22223327-C-A **
14846982-T-G 12735048-T-G **
23052933-AT-A 20891047-AT-A 8×T**
28521548-C-A 26375401-C-A **
16475324-CGG-C 14363444-CGG-C 11×G**
13222722-GGTACA-G 11067046-GGTACA-G **
13222733-AGAGG-A 11067057-AGAGG-A **
13222748-GGGAA-G 11067072-GGGAA-G **
6147479-G-C 6279438-G-C IR3_Dst **
10815703-A-C **
18733453-C-A 16621573-C-A **
10801745-A-C **
10961428-C-T **
17756584-C-CTT 15644704-C-CTT 11×T**
17500864-G-T 15388984-G-T **
4873763-C-A 5005722-C-A **
21583977-C-A 19422091-C-A **
7939541-C-A 8071500-C-A **
18172922-C-A 16061042-C-A **
18491434-C-A 16379554-C-A P6_Dst **
28688966-C-A 26542819-C-A **
21334532-C-A 19172646-C-A **
7608378-C-A 7740337-C-A **
15034707-C-A 12922795-C-A **
26376498-T-A 24230351-T-A P1_Y1 **
56763471-T-C **
56763480-T-A **
18596137-T-C 16484257-T-C Y3139 FGC13365 **
10984375-T-C **
10984380-T-C **
9945886-T-A 10108277-T-A **
9524375-G-T 9686766-G-T **
17923865-G-T 15811985-G-T **
15882455-C-T 13770575-C-T **
19438602-G-A 17326722-G-A **
10822861-C-A **
4863375-G-T 4995334-G-T **
21626991-C-A 19465105-C-A **
18253503-C-A 16141623-C-A **
26140129-A-T 23993982-A-T P1_Y1 **
14551680-CA-C 12439881-CA-C 10×A**
28745027-C-A 26598880-C-A **
4873755-C-A 5005714-C-A **
17323689-GGGAA-G 15211809-GGGAA-G **
10790407-CCCCG-C **
10802036-CACTGA-C **
26010268-G-A 23864121-G-A P1_Y1 21×TA**
2928493-C-A 3060452-C-A **
10790389-C-T **
10790390-C-A **
21541425-G-T 19379539-G-T **
10790393-CCAATCCCTTCT-C **
10790416-A-T **
23807555-T-G 21645669-T-G **
10790420-A-T **
10790430-ATCCCCCCCCC-A **
10790447-CCCACTCC-T **
10790457-C-CGT **
10866207-A-C **
3849441-C-A 3981400-C-A **
13461053-A-T 11305377-A-T **
13461080-A-T 11305404-A-T **
5186716-G-T 5318675-G-T **
10785259-G-C **
10770590-C-T **
17038319-CTT-C 14926439-CTT-C 13×T**
24363633-CTTT-C 22217486-CTTT-C 16×T**
10946589-C-A **
21561547-CA-C 19399661-CA-C 9×A**
10785252-C-G **
10785265-T-A **
10930046-T-C **
10792784-A-ATTTCT **
10767693-T-C **
18959212-CTCA-C 16847332-CTCA-C **
16305899-T-G 14194019-T-G **
17071190-CGAAA-C 14959310-CGAAA-C 6×GAAA**
10925363-T-C **
10946571-C-T **
10946600-A-C **
10946606-C-A **
10973888-T-C **
15604346-C-A 13492466-C-A **
16505169-C-A 14393289-C-A **
14402455-A-G 12281752-A-G **
9008606-AT-A 9170997-AT-A 10×T**
10929989-T-C **
20840321-C-A 18678435-C-A P4_Gap **
13486589-C-G 11330913-C-G **
10762977-A-C **
17448496-CA-C 15336616-CA-C 9×A**
10821906-C-G **
14071484-C-A 11950778-C-A **
10751084-T-C **
21086136-TAA-T 18924250-TAA-T 24×A**
11036132-C-T **
14000478-C-A 11879772-C-A **
10961474-C-T **
14712630-G-T 12600697-G-T **
23190043-G-T 21028157-G-T **
24595356-CTTT-C 22449209-CTTT-C P3_t2 26×T**
13223476-A-G 11067800-A-G **
2758146-C-A 2890105-C-A **
22598228-C-A 20436342-C-A **
10984385-T-C **
8428944-C-A 8560903-C-A 25×A**
21555238-CTTTT-C 19393352-CTTTT-C 15×T**
28732922-C-A 26586775-C-A **
8663598-C-A 8795557-C-A **
10821943-A-T **
10655438-C-T **
22914441-C-A 20752555-C-A **
17547554-C-A 15435674-C-A **
21663244-C-A 19501358-C-A **
7939528-C-A 8071487-C-A **
10792773-C-CATGCT **
7165301-G-T 7297260-G-T **
13486593-G-C 11330917-G-C **
10792780-T-G **
11014575-G-T **
10686718-C-T **
14781035-C-A 12669105-C-A **
23801701-C-A 21639815-C-A **
15264753-G-T 13152842-G-T **
7470634-T-A 7602593-T-A IR1_L **
19213462-C-A 17101582-C-A **
22489656-T-G 20327770-T-G DYZ19 **
13460458-G-T 11304782-G-T **
3467236-A-G 3599195-A-G **
18443597-A-G 16331717-A-G P6_Dst **
3202857-G-A 3334816-G-A **
3274206-T-A 3406165-T-A **
3385537-A-T 3517496-A-T **
3413726-T-G 3545685-T-G **
3427069-G-A 3559028-G-A **
3593343-A-G 3725302-A-G **
3061060-C-G 3193019-C-G **
3627847-C-A 3759806-C-A **
3744318-C-A 3876277-C-A **
3814639-C-T 3946598-C-T **
4063848-C-T 4195807-C-T **
7925845-G-T 8057804-G-T S10848 **
4123698-C-A 4255657-C-A **
4138944-G-T 4270903-G-T **
4179019-AT-A 4310978-AT-A **
5446940-C-A 5578899-C-A **
4474562-G-A 4606521-G-A **
2762228-T-G 2894187-T-G **
13222710-GAGGGA-G 11067034-GAGGGA-G **
9702956-C-A 9865347-C-A IR3_Prx **
7608474-T-C 7740433-T-C **
2752685-C-A 2884644-C-A **
9516751-C-T 9679142-C-T 14×T**
2762133-C-A 2894092-C-A **
2762216-G-A 2894175-G-A **
2766730-A-T 2898689-A-T **
2929050-A-C 3061009-A-C **
2775170-G-T 2907129-G-T **
2799586-G-A 2931545-G-A **
2809215-T-C 2941174-T-C **
2832613-A-C 2964572-A-C **
2843123-T-C 2975082-T-C **
2876844-G-T 3008803-G-T **
2923611-G-T 3055570-G-T **
4357848-G-C 4489807-G-C **
15969955-AT-A 13858075-AT-A **
9926736-G-A 10089127-G-A **
6434897-C-A 6566856-C-A **
5870039-A-T 6001998-A-T **
5870141-A-T 6002100-A-T **
6012823-T-C 6144782-T-C **
6146287-A-T 6278246-A-T IR3_Dst **
6147480-C-A 6279439-C-A IR3_Dst **
6152785-A-G 6284744-A-G IR3_Dst **
6631355-G-A 6763314-G-A **
17319971-G-GAGAAAGAAAGAA 15208091-G-GAGAAAGAAAGAA 13×AGAA**
6651875-C-A 6783834-C-A **
6791343-C-A 6923302-C-A **
6792463-C-A 6924422-C-A **
6847927-C-A 6979886-C-A **
6881209-C-A 7013168-C-A **
6891873-C-A 7023832-C-A **
6922430-A-T 7054389-A-T **
5870001-A-G 6001960-A-G **
14977328-C-A 12865403-C-A ****
4521617-A-AG 4653576-A-AG **
5204584-C-A 5336543-C-A **
4740583-A-C 4872542-A-C **
15108916-C-CT 12997003-C-CT 15×T**
4889778-T-C 5021737-T-C **
4929012-C-A 5060971-C-A **
4929969-TA-T 5061928-TA-T **
4957956-A-G 5089915-A-G **
5170222-A-C 5302181-A-C **
5294101-T-G 5426060-T-G **
5864080-C-A 5996039-C-A **
5335775-C-A 5467734-C-A **
5412188-C-A 5544147-C-A **
5562683-A-T 5694642-A-T **
5576829-C-G 5708788-C-G **
5678211-G-T 5810170-G-T **
5727861-C-A 5859820-C-A **
5852775-C-A 5984734-C-A **
10815725-G-C **
2938573-T-C 3070532-T-C **
16090216-C-A 13978336-C-A **
10751090-A-T **
22167851-C-A 20005965-C-A **
15279232-A-G 13167331-A-G **
22896087-C-A 20734201-C-A **
10751023-C-CCAATCCACAG **
15750530-A-T 13638650-A-T **
14765706-G-T 12653775-G-T **
5560178-C-A 5692137-C-A **
10751093-C-T **
19479985-C-A 17368105-C-A **
20826397-CTTTTTT-C 18664511-CTTTTTT-C P4_Gap 17×T**
10958430-C-A **
14802023-TG-T 12690094-TG-T **
15749462-C-A 13637582-C-A **
7670972-C-A 7802931-C-A **
9908434-G-T 10070825-G-T **
13488872-C-G 11333196-C-G **
10992422-C-A **
15177438-C-A 13065524-C-A **
15076309-C-A 12964399-C-A **
28468798-C-A 26322651-C-A **
7775675-C-A 7907634-C-A **
14295213-C-A 12174507-C-A **
26275953-C-G 24129806-C-G P1_Y1 16×T**
19461922-C-A 17350042-C-A **
13223453-G-GAGGAA 11067777-G-GAGGAA **
16765423-C-A 14653543-C-A **
3594008-C-A 3725967-C-A **
15557063-G-A 13445183-G-A **
13493298-C-A 11337622-C-A **
7166815-C-A 7298774-C-A **
10778499-G-T **
16604909-C-A 14493029-C-A **
10973878-C-A **
14449657-C-A 12328930-C-A **
22965821-C-A 20803935-C-A **
4172384-C-A 4304343-C-A **
17201762-C-T 15089882-C-T 16×T**
24595403-G-T 22449256-G-T P3_t2 **
16056221-C-A 13944341-C-A **
28815147-T-C 26669000-T-C **
7166937-C-A 7298896-C-A **
8379746-T-C 8511705-T-C **
10943129-C-T **
17753811-C-A 15641931-C-A **
14819778-C-A 12707845-C-A **
10654694-G-T **
13411005-C-A 11255329-C-A **
10625705-C-A **
10003661-A-G 10166052-A-G **
14898403-GT-G 12786469-GT-G 9×T**
28773682-C-A 26627535-C-A **
28802625-A-AATGGC 26656478-A-AATGGC **
7307615-C-A 7439574-C-A **
13454761-C-A 11299085-C-A **
23343910-T-TA 21182024-T-TA 11×A***
13827284-A-G 11706578-A-G ***
18162911-G-T 16051031-G-T ***
22917723-C-A 20755837-C-A ***
2806030-ATT-A,AT 2937989-ATT-A,AT 16×T***
18083835-C-A 15971955-C-A Z16433Z16433 ***
58980008-A-T 56833861-A-T ***
23527014-C-A 21365128-C-A ***
21560584-C-A 19398698-C-A ***
8735099-C-A 8867058-C-A ***
10050565-C-A 10212956-C-A ***
23963916-A-G 21817769-A-G ***
16288086-C-CT 14176206-C-CT 11×T***
19060766-C-A 16948886-C-A ***
18185006-G-T 16073126-G-T ******
22870546-C-A 20708660-C-A ***
22679397-AT-A 20517511-AT-A 10×T***
9827264-AT-A 9989655-AT-A 10×T***
23232218-C-T 21070332-C-T ***
21505198-T-C 19343312-T-C ***
56828919-CATGTC-C,CATGCT ***
21489262-C-A 19327376-C-A ***
18760242-TTC-T 16648362-TTC-T 27×TC***
24423214-CAT-C 22277067-CAT-C ***
23557833-C-A 21395947-C-A ***
21201065-C-A 19039179-C-A ***
21212107-G-C 19050221-G-C ***
13866809-CGG-C,CGA 11746103-CGG-C,CGA ***
23555024-C-A 21393138-C-A ***
21262388-T-A 19100502-T-A ***
13802810-A-G 11682104-A-G ***
10050580-A-C 10212971-A-C ***
15670980-G-A 13559100-G-A ***
13831942-G-T 11711236-G-T ***
22978954-C-A 20817068-C-A ***
23541408-CAAA-C 21379522-CAAA-C 17×A***
14621674-CAG-C 12509872-CAG-C 9×AG***
23259489-C-A 21097603-C-A ***
9994774-A-G 10157165-A-G ***
21428793-T-C 19266907-T-C ***
16019397-G-GA 13907517-G-GA 10×A***
23271732-T-TA 21109846-T-TA 11×A***
24517842-C-A 22371695-C-A ***
28784635-G-A 26638488-G-A ***
23281389-C-A 21119503-C-A ***
13847196-A-G 11726490-A-G ***
13858765-G-A 11738059-G-A ***
17662183-A-G 15550303-A-G ***
23963915-C-A 21817768-C-A ***
13480745-T-C 11325069-T-C ***
2649802-CAAAAAA-C 2781761-CAAAAAA-C 24×A***
13480755-A-G 11325079-A-G ***
24434623-C-A 22288476-C-A ***
14159518-G-A 12038812-G-A FGC10179 ***
24434680-C-A 22288533-C-A ***
58976059-C-G 56829912-C-G ***
13480737-C-A 11325061-C-A ***
8499010-CT-C 8630969-CT-C 10×T***
13858749-G-T 11738043-G-T ***
23412321-G-A 21250435-G-A ***
13489264-G-C 11333588-G-C ***
4302690-C-A 4434649-C-A ***
13847199-G-T 11726493-G-T ***
13847205-A-AAAGAT 11726499-A-AAAGAT ***
24472623-T-C 22326476-T-C ***
10050546-T-G 10212937-T-G ***
23411845-A-G 21249959-A-G ***
22138249-T-A 19976363-T-A ***
17192946-AAT-A 15081066-AAT-A ***
28706475-C-A 26560328-C-A ***
13819545-A-AT 11698839-A-AT ***
58972979-GATTCCATTCCATTCGATTCCATTCCATTCA-G 56826832-GATTCCATTCCATTCGATTCCATTCCATTCA-G ***
22833971-T-A 20672085-T-A ***
13804078-T-A 11683372-T-A ***
10021628-C-A 10184019-C-A ***
13819541-TA-T 11698835-TA-T ***
28605497-A-T 26459350-A-T ***
7988099-CTTT-C 8120058-CTTT-C 14×T***
28559368-T-C 26413221-T-C ***
8459392-ATTAT-A 8591351-ATTAT-A 6×TTAT***
22508059-T-A 20346173-T-A DYZ19 ***
23003575-C-A 20841689-C-A ***
10050555-C-A 10212946-C-A ***
2809578-G-T 2941537-G-T ***
58979803-CCTATTCCATTCCTCT-C,CCCTTTCGATTCCTCT 56833656-CCTATTCCATTCCTCT-C,CCCTTTCGATTCCTCT ***
13819552-G-C 11698846-G-C ***
21961552-T-C 19799666-T-C ***
21986624-T-C 19824738-T-C ***
10021636-G-C 10184027-G-C ***
13847243-G-T 11726537-G-T ***
9880184-G-T 10042575-G-T ***
22076869-C-A 19914983-C-A ***
7325053-GTA-G 7457012-GTA-G ***
15652781-A-C 13540901-A-C ***
8835383-AT-A 8967342-AT-A 10×T***
13417304-C-A 11261628-C-A ***
10012889-A-C 10175280-A-C ***
10016240-C-A 10178631-C-A ***
2761547-A-G 2893506-A-G ***
23745129-G-T 21583243-G-T ***
13489284-G-T 11333608-G-T ***
13489282-G-T 11333606-G-T ***
13489304-G-A 11333628-G-A ***
9454024-GT-G 9616415-GT-G 9×T***
17054890-T-C 14943010-T-C ***
14599917-C-A 12488117-C-A ***
56832825-ACTCCA-G ***
56825740-CATATATATATAT-C,CAT ***
17574856-C-A 15462976-C-A ***
9972534-C-A 10134925-C-A ***
13457453-A-T 11301777-A-T ***
13457480-A-C 11301804-A-C ***
13457825-C-A 11302149-C-A ***
13489297-C-A 11333621-C-A ***
11663331-C-A ***
14078942-T-C 11958236-T-C ***
10977138-C-T ***
14298180-A-C 12177474-A-C ***
14416342-C-A 12295639-C-A ***
56832012-C-CCACTG ***
21235211-C-A 19073325-C-A ***
14552175-TAAA-T,TAA 12440376-TAAA-T,TAA 13×A***
2970218-C-A 3102177-C-A ***
9900320-G-A 10062711-G-A ***
14840899-C-A 12728966-C-A ***
7987773-C-CT 8119732-C-CT 9×T***
6828055-G-A 6960014-G-A ***
6644734-A-T 6776693-A-T ***
7200260-C-A 7332219-C-A ***
7228119-C-A 7360078-C-A ***
7308674-T-C 7440633-T-C ***
7314775-C-A 7446734-C-A ***
7365452-C-A 7497411-C-A ***
7415580-T-A 7547539-T-A ***
7701244-C-A 7833203-C-A ***
7775964-G-C 7907923-G-C ***
7918686-C-A 8050645-C-A ***
5190980-C-A 5322939-C-A ***
7987783-A-G 8119742-A-G ***
9880223-G-T 10042614-G-T ***
4961352-G-T 5093311-G-T ***
8108356-CAA-C,CA 8240315-CAA-C,CA 15×A***
8151724-G-A 8283683-G-A ***
4770376-A-C 4902335-A-C ***
13845494-T-C 11724788-T-C ***
8599722-C-A 8731681-C-A ***
8661513-C-A 8793472-C-A ***
8715340-T-C 8847299-T-C ***
8735128-G-T 8867087-G-T ***
8737150-C-A 8869109-C-A ***
8784872-G-T 8916831-G-T ***
9730543-G-T 9892934-G-T IR3_Prx ***
9880217-G-T 10042608-G-T ***
14621616-C-A 12509814-C-A ***
14953234-C-T 12841308-C-T ***
21087397-T-A 18925511-T-A ***
18891729-A-G 16779849-A-G ***
13521039-GAT-G,GATAT 11365363-GAT-G,GATAT 10×AT***
17657564-C-A 15545684-C-A ***
17708372-C-A 15596492-C-A ***
17708383-T-A 15596503-T-A ***
56831837-CTATTCCATTACATTC-C,CTATTCCATTGCATTA ***
10958323-C-A ***
10658227-C-A ***
17924736-C-A 15812856-C-A ***
17941747-T-C 15829867-T-C ***
18740689-C-A 16628809-C-A ***
18785279-T-C 16673399-T-C ***
18816752-G-A 16704872-G-A ***
13478275-C-G 11322599-C-G ***
21825099-CAA-C 19663213-CAA-C 15×A***
10958353-C-T ***
19049463-C-A 16937583-C-A ***
14286823-T-G 12166117-T-G ***
19134109-C-A 17022229-C-A ***
19302745-T-A 17190865-T-A ***
19320384-T-C 17208504-T-C ***
14485171-G-T 12364440-G-T ***
8817412-C-A 8949371-C-A ***
19527293-G-A 17415413-G-A ***
19529757-A-T 17417877-A-T ***
8835351-CT-C 8967310-CT-C 8×T***
21052705-C-CT 18890819-C-CT 9×T***
13489256-C-A 11333580-C-A ***
10780513-C-T ***
16458133-C-A 14346253-C-A ***
20001304-G-A 17889424-G-A P5_Prx ***
15778123-C-A 13666243-C-A ***
15041315-C-A 12929405-C-A ***
15055072-A-G 12943163-A-G ***
15056816-TA-T 12944908-TA-T ***
15251768-C-A 13139854-C-A ***
15335077-A-G 13223195-A-G ***
15336663-A-G 13224781-A-G ***
15418627-C-A 13306747-C-A ***
6458211-C-A 6590170-C-A ***
15565367-A-G 13453487-A-G ***
15658859-A-G 13546979-A-G ***
15064857-A-AT 12952949-A-AT 9×T***
14831720-GT-G,GTT 12719787-GT-G,GTT 17×T***
15786423-T-A 13674543-T-A ***
11652838-T-C ***
15860637-C-A 13748757-C-A ***
15895322-C-A 13783442-C-A ***
15904440-C-A 13792560-C-A ***
15975677-G-T 13863797-G-T ***
10988592-TTTCATTCCAC-T,TTATACTCCAT ***
10958315-A-G ***
28805817-C-A 26659670-C-A ***
16361717-C-A 14249837-C-A ***
10958324-C-A ***
8042534-C-A 8174493-C-A ***
16888589-C-A 14776709-C-A ***
16955742-C-A 14843862-C-A ***
11652843-T-A ***
13820848-C-G 11700142-C-G ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 302251021245973405567406428
Kit: 30225891099372970007237714
Used in age calculations1021245973405567406428
Counts of SNPs32
Variant counts last updated 2018-01-24 22:55:10.



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