Tree Position

R-P312/S116 > Z40481 > DF99/S11987 > FGC16982 > S23540 > FGC16979

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
CLDE4
14276133-G-A 12155427-G-A YY+
26580086-C-T 24433939-C-T P1_g2 +
7405904-T-G 7537863-T-G YY+
17464272-G-A 15352392-G-A YY+
7259766-C-G 7391725-C-G YY+
17156035-T-A 15044155-T-A YY+
6983499-ATGTG-A 7115458-ATGTG-A +
6931490-C-G 7063449-C-G YY+
6613766-A-T 6745725-A-T +
8328326-G-A 8460285-G-A YY+
3124300-C-T 3256259-C-T +
23589522-G-A 21427636-G-A YY+
23962531-A-C 21816384-A-C Y+
13869169-G-C 11748463-G-C +
13869167-A-C 11748461-A-C +
3200707-T-A 3332666-T-A +
16277692-T-C 14165812-T-C YY+
6931960-G-A 7063919-G-A L1272 CTS661 YY+
4474294-A-G 4606253-A-G +
9815201-T-C 9977592-T-C PF4521 YY+
3295904-T-A 3427863-T-A FGC6239 Z8508 10×A+
2687078-C-G 2819037-C-G YY+
2686954-T-G 2818913-T-G YY+
18074370-A-T 15962490-A-T YY+
18566500-C-G 16454620-C-G YY+
13227566-A-G 11071890-A-G +
23522480-C-A 21360594-C-A YY+
9958649-G-A 10121040-G-A Y+
13396690-G-T 11241014-G-T +
22199297-C-T 20037411-C-T Y7289 YY+
17980209-G-T 15868329-G-T Y+
17915812-T-C 15803932-T-C YY+
22835198-C-A 20673312-C-A YY+
22607643-G-A 20445757-G-A YY+
23611305-C-T 21449419-C-T K434 YY+
8679410-C-A 8811369-C-A YY+
23118342-T-G 20956456-T-G YY+
21606000-T-A 19444114-T-A YY+
2687325-G-A 2819284-G-A YY+
14851180-C-A 12739246-C-A YY+
6013482-G-A 6145441-G-A +
5655120-C-T 5787079-C-T +
15260552-A-G 13148636-A-G YY+
22460398-C-G 20298512-C-G DYZ19 +
24879136-G-C 22732989-G-C g1 +
4113595-G-C 4245554-G-C +
4322293-G-C 4454252-G-C +
14074217-G-T 11953511-G-T Y+
22446204-A-G 20284318-A-G DYZ19 +
4347699-A-T 4479658-A-T +
4919950-C-T 5051909-C-T +
5210025-T-G 5341984-T-G +
24879140-T-A 22732993-T-A g1 +
25065529-T-C 22919382-T-C g1 +
13697603-G-A 11541927-G-A +
4078387-C-T 4210346-C-T +
13869163-T-C 11748457-T-C +
15470048-C-T 13358168-C-T YY+
13686374-G-T 11530698-G-T +
4863349-T-C 4995308-T-C +
6004104-C-T 6136063-C-T +
15799114-C-CCCTTCCTT 13687234-C-CCCTTCCTT 14×CCTT+
21389659-T-C 19227773-T-C YY+
14102609-G-A 11981903-G-A YY+
15433758-T-G 13321878-T-G YY+
13702818-C-T 11547142-C-T +
19529805-A-G 17417925-A-G YY+
13869162-A-T 11748456-A-T +
15404055-G-A 13292175-G-A YY+
15343196-C-T 13231315-C-T YY+
3948785-A-G 4080744-A-G +
13566991-A-AT 11411315-A-AT 17×T+
5778237-A-C 5910196-A-C +
5133847-GT-G 5265806-GT-G +
9985056-G-A 10147447-G-A Y*
13143365-C-A 10632851-C-A *
13143361-A-C 10632847-A-C *
13138776-C-G 10628262-C-G *
6091720-ATT-A 6223679-ATT-A 28×T*
13138760-C-T 10628246-C-T *
22509555-A-T 20347669-A-T DYZ19 *
13195651-C-A 11039975-C-A *
13143503-C-T 10632989-C-T *
13449062-CCACTG-C 11293386-CCACTG-C *
13196378-G-A 11040702-G-A *
13196386-A-T 11040710-A-T *
13269822-T-G 11114146-T-G *
13346722-G-T 11191046-G-T *
13378005-A-C 11222329-A-C *
13439504-T-C 11283828-T-C *
13447775-A-T 11292099-A-T *
13450817-G-A,T 11295141-G-A,T *
22508362-A-T 20346476-A-T DYZ19 *
22448742-T-C 20286856-T-C DYZ19 *
13474301-T-C 11318625-T-C *
22436858-G-A 20274972-G-A DYZ19 *
13486878-C-T 11331202-C-T *
13506845-G-T 11351169-G-T *
13513671-C-A 11357995-C-A *
13593090-C-T 11437414-C-T *
13196270-C-T 11040594-C-T *
13195935-C-T 11040259-C-T *
13143509-T-A 10632995-T-A *
13195656-C-T 11039980-C-T *
13143518-A-C 10633004-A-C *
13143520-T-A 10633006-T-A *
13195606-C-T 11039930-C-T *
13195628-T-G 11039952-T-G *
13195636-G-A 11039960-G-A *
13195640-T-G 11039964-T-G *
13195645-C-A 11039969-C-A *
13195659-A-C 11039983-A-C *
13195894-G-A 11040218-G-A *
13195661-T-A 11039985-T-A *
13195677-A-G 11040001-A-G *
13195681-C-T 11040005-C-T *
13195712-T-C 11040036-T-C *
13195724-T-C 11040048-T-C *
13195874-G-A 11040198-G-A *
13195878-G-A 11040202-G-A *
13195893-A-C 11040217-A-C *
5878150-CT-C 6010109-CT-C 14×T*
58976804-T-A 56830657-T-A *
5235405-C-T 5367364-C-T 31×T*
4997519-CAG-C 5129478-CAG-C 16×AG*
4077503-G-C 4209462-G-C *
5531028-GA-G 5662987-GA-G 12×A*
5270693-C-CT 5402652-C-CT 22×T*
27474262-AT-A 25328115-AT-A P1_Y2 15×T*
13466246-A-T 11310570-A-T *
28802599-G-C 26656452-G-C *
5102277-CT-C 5234236-CT-C 26×T*
3478355-C-CT 3610314-C-CT 14×T*
13138773-C-A 10628259-C-A *
4020761-TA-T 4152720-TA-T 12×A*
58994929-C-A 56848782-C-A *
13705973-G-A 11550297-G-A *
59027721-C-A 56881574-C-A *
28534940-CT-C 26388793-CT-C 18×T*
13722003-T-C 11566327-T-C *
13474540-C-A 11318864-C-A *
14926462-C-CA 12814527-C-CA 26×A*
13468338-GC-G 11312662-GC-G *
28795249-T-A 26649102-T-A *
13718399-T-G 11562723-T-G *
13718304-T-A 11562628-T-A *
13195379-C-G 11039703-C-G *
13141945-C-T 10631431-C-T *
13141918-C-T 10631404-C-T *
13259827-G-C 11104151-G-C *
13694619-C-A 11538943-C-A *
28802513-G-T 26656366-G-T *
58994878-T-A 56848731-T-A *
58994876-C-T 56848729-C-T *
13451437-T-G 11295761-T-G *
2994613-G-GT 3126572-G-GT 14×T*
4460958-A-C 4592917-A-C *
4794855-C-CT 4926814-C-CT 21×T*
7383851-CAA-C 7515810-CAA-C 24×A*
22510127-G-A 20348241-G-A DYZ19 *
3529572-CT-C 3661531-CT-C 13×T*
3171902-CA-C 3303861-CA-C 13×A*
21177056-TTA-T 19015170-TTA-T 11×TA*
13468316-CT-C 11312640-CT-C *
3755401-AT-A 3887360-AT-A 14×T*
3638582-AT-A 3770541-AT-A 11×T*
58976824-C-A 56830677-C-A *
9429667-C-A 9592058-C-A Y25×A*
19056342-T-A 16944462-T-A YY*
13637277-T-G 11481601-T-G *
24614100-A-T 22467953-A-T P3_t2 *
13546989-A-AT 11391313-A-AT 16×T*
13448914-C-G 11293238-C-G *
8403272-C-CAA 8535231-C-CAA 28×A*
3996455-G-GA 4128414-G-GA 10×A*
6150009-GTATA-G,GTA 6281968-GTATA-G,GTA IR3_Dst 19×TA*
18728740-G-C 16616860-G-C YY*
13710114-C-G 11554438-C-G *
13977154-G-A 11856448-G-A Y*
13196384-C-A 11040708-C-A *
13195942-C-A 11040266-C-A *
5155953-TA-T 5287912-TA-T 13×A*
13279998-CAA-C 11124322-CAA-C 26×A*
14443854-T-C 12323127-T-C Y*
6665057-TA-T 6797016-TA-T 12×A*
14073187-C-T 11952481-C-T YY27×T*
13461065-G-A 11305389-G-A *
13637275-G-A 11481599-G-A *
22275153-G-A 20113267-G-A DYZ19 *
13688213-A-C 11532537-A-C *
13347573-G-T 11191897-G-T *
13466527-T-A 11310851-T-A *
13466524-G-T 11310848-G-T *
13466522-A-T 11310846-A-T *
13458650-C-G 11302974-C-G *
13449374-C-T 11293698-C-T *
13448991-G-A 11293315-G-A *
13447635-A-G 11291959-A-G *
13445668-GAAA-G,GA 11289992-GAAA-G,GA 9×A*
13431857-C-T 11276181-C-T *
13398102-A-G 11242426-A-G *
13378255-A-T 11222579-A-T *
13374277-GA-G 11218601-GA-G 13×A*
13351320-A-G 11195644-A-G *
13347567-G-A 11191891-G-A *
13469107-G-T 11313431-G-T *
13332044-G-T 11176368-G-T *
13322656-TACC-T 11166980-TACC-T *
13282275-T-G 11126599-T-G *
13275247-G-T 11119571-G-T *
13270055-C-T 11114379-C-T *
13196277-CCAACTT-C 11040601-CCAACTT-C *
13195931-A-G 11040255-A-G *
13195930-C-T 11040254-C-T *
13195923-C-T 11040247-C-T *
9995971-T-G 10158362-T-G Y*
9995885-C-A 10158276-C-A Y*
9941694-G-A,T 10104085-G-A,T *
9524019-GTATA-G,GTATATA 9686410-GTATA-G,GTATATA 21×TA*
9355906-C-A 9518297-C-A Y*
13468130-C-G 11312454-C-G *
13474291-T-A 11318615-T-A *
18804474-AAGAGAG-A,AAG 16692594-AAGAGAG-A,AAG 26×AG*
13705634-T-G 11549958-T-G *
14180087-G-A 12059381-G-A Y*
13957840-C-CT 11837134-C-CT 11×T*
14866140-C-CGT,CGTGT 11×GT*
13748537-G-T 11592861-G-T *
14898435-C-CT,CTT 15×T*
13718409-T-G 11562733-T-G *
13718407-A-G 11562731-A-G *
13715164-T-C 11559488-T-C *
13712712-C-T 11557036-C-T *
13710620-T-A 11554944-T-A *
13709894-C-T 11554218-C-T *
13709114-C-G 11553438-C-G *
13706209-G-T 11550533-G-T *
15317473-A-G 13205579-A-G YY*
13697555-A-G 11541879-A-G *
13474386-C-T 11318710-C-T *
13694921-C-G 11539245-C-G *
13694920-C-T 11539244-C-T *
13691929-A-G 11536253-A-G *
13691899-A-G 11536223-A-G *
13691696-A-C 11536020-A-C *
13691686-T-C 11536010-T-C *
13688859-C-A 11533183-C-A *
16227948-A-G 14116068-A-G YY*
13592800-G-C 11437124-G-C *
13577907-T-C 11422231-T-C *
13529409-T-C 11373733-T-C *
13489670-G-T 11333994-G-T *
13474449-G-T 11318773-G-T *
13474388-G-A 11318712-G-A *
9234670-C-A 9397061-C-A Y*
7532276-GTATATATA-G,GTATA 7664235-GTATATATA-G,GTATA 28×TA*
13694583-A-C 11538907-A-C *
58983078-C-A 56836931-C-A *
13572046-T-A 11416370-T-A *
13498288-C-T 11342612-C-T *
58994863-T-A 56848716-T-A *
13450247-C-A 11294571-C-A *
13448267-T-C 11292591-T-C *
22318256-T-G 20156370-T-G DYZ19 *
9995978-A-G 10158369-A-G Y*
9995972-G-C 10158363-G-C Y*
9992065-C-G 10154456-C-G Y*
9992037-T-C 10154428-T-C Y*
5777425-A-G 5909384-A-G *
3253170-C-CT 3385129-C-CT 22×T*
58986028-C-T 56839881-C-T *
58980029-T-C,G 56833882-T-C,G *
13711695-A-T 11556019-A-T *
58979189-TA-T 56833042-TA-T *
58977940-T-A 56831793-T-A *
28812387-T-A 26666240-T-A *
28498866-TA-T 26352719-TA-T 13×A*
24343457-T-G 22197310-T-G P3_t1 *
21697086-T-C 19535200-T-C YY*
15255769-GGTGT-G,GGT 24×GT*
14232005-A-G 12111299-A-G YY*
13726212-A-G 11570536-A-G *
13726019-CGGACTGGAAT-C 11570343-CGGACTGGAAT-C *
13719508-T-G 11563832-T-G *
13708082-G-A 11552406-G-A *
22432672-G-A 20270786-G-A DYZ19 *
13705835-A-C 11550159-A-C *
13704799-A-T 11549123-A-T *
13711701-A-C 11556025-A-C *
6468926-T-TAA 6600885-T-TAA 28×A*
21464771-G-GTTC,GTTCTTC 19302885-G-GTTC,GTTCTTC 16×TTC*
6403301-T-C 6535260-T-C *
6402335-T-C 6534294-T-C *
6401842-G-A 6533801-G-A *
6177481-T-TTG,TTGTG 6309440-T-TTG,TTGTG IR3_Dst 23×TG*
5936154-A-G 6068113-A-G *
5930901-C-T 6062860-C-T *
5797434-G-GAT,GATAT 5929393-G-GAT,GATAT 21×AT*
5760628-G-C 5892587-G-C *
5408740-AGT-A 5540699-AGT-A *
5350037-C-CT 5481996-C-CT 21×T*
5235368-A-T 5367327-A-T *
4483292-A-AT,ATT 4615251-A-AT,ATT 14×T*
4468316-C-CA 4600275-C-CA 12×A*
3838601-C-CT 3970560-C-CT 31×T*
3259035-CA-C,CAA 3390994-CA-C,CAA 22×A*
13715957-T-G 11560281-T-G *
3058481-C-T 3190440-C-T *
3041018-G-C 3172977-G-C *
3031203-C-T 3163162-C-T *
3031166-A-G 3163125-A-G *
3015855-G-T 3147814-G-T *
58994877-C-G 56848730-C-G *
58978212-C-G 56832065-C-G *
58976868-A-C 56830721-A-C *
28816433-G-C 26670286-G-C *
28468253-C-CT 26322106-C-CT 13×T*
22260199-T-A 20098313-T-A DYZ19 *
14842406-ATT-A,AT 22×T*
13718583-A-T 11562907-A-T *
13715959-G-C 11560283-G-C *
58994875-A-T 56848728-A-T *
59027301-AAAAAC-A,AAAAAGC 56881154-AAAAAC-A,AAAAAGC 4×AAAAC*
13734162-G-A 11578486-G-A *
13691834-T-G 11536158-T-G *
13448341-A-T 11292665-A-T *
58970180-A-G 56824033-A-G *
13635012-G-A 11479336-G-A *
13636683-G-T 11481007-G-T *
58827245-C-T 56763626-G-A *
13690259-T-C 11534583-T-C *
13691935-T-C 11536259-T-C *
13446362-C-T 11290686-C-T *
13692043-A-C 11536367-A-C *
13692320-T-A 11536644-T-A *
13692321-C-A 11536645-C-A *
13692331-G-A 11536655-G-A *
13692361-T-A 11536685-T-A *
13694487-G-A 11538811-G-A *
13694502-G-A 11538826-G-A *
13446371-T-G 11290695-T-G *
13332167-C-T 11176491-C-T *
13711707-T-A 11556031-T-A *
13196358-G-T 11040682-G-T *
6403090-G-A 6535049-G-A *
6403221-C-T 6535180-C-T *
9941770-T-C 10104161-T-C Y*
9941783-A-G 10104174-A-G Y*
9985090-T-C 10147481-T-C Y*
13196342-G-T 11040666-G-T *
13262342-G-A 11106666-G-A *
13332090-C-T 11176414-C-T *
13262477-C-T 11106801-C-T *
13263903-A-C 11108227-A-C *
13264717-G-T 11109041-G-T ZS7975 *
13293086-T-G 11137410-T-G *
13304394-T-C 11148718-T-C *
13314946-G-A 11159270-G-A *
13317207-A-G 11161531-A-G *
13711644-G-C 11555968-G-C *
4887612-CAA-C 5019571-CAA-C 29×A*
5366640-T-G 5498599-T-G *
59014013-G-A 56867866-G-A *
28801269-A-G 26655122-A-G *
59012483-T-A 56866336-T-A *
59012541-G-A 56866394-G-A *
28801267-G-C 26655120-G-C *
59013931-C-G 56867784-C-G *
59013962-A-G 56867815-A-G *
59027543-T-C 56881396-T-C *
59006353-C-T 56860206-C-T *
59027652-T-G 56881505-T-G *
59027751-G-A 56881604-G-A *
59028583-C-A 56882436-C-A *
59029216-T-C 56883069-T-C *
59029265-C-T 56883118-C-T *
59029311-G-T 56883164-G-T *
59029406-G-A 56883259-G-A *
28805487-G-T 26659340-G-T *
59006299-G-T 56860152-G-T *
13711984-G-T 11556308-G-T *
28805692-G-A 26659545-G-A *
13712002-T-G 11556326-T-G *
13718284-T-C 11562608-T-C *
13718316-GAATGGAATGGAATGA-G 11562640-GAATGGAATGGAATGA-G *
28814748-T-A 26668601-T-A *
15573150-T-G 13461270-T-G YY*
18872305-C-T 16760425-C-T YY*
28806074-G-A 26659927-G-A *
28794584-T-A 26648437-T-A S3116 *
58986106-G-C 56839959-G-C *
28796866-T-G 26650719-T-G *
28810812-G-T 26664665-G-T *
28805690-G-A 26659543-G-A *
28814785-A-T 26668638-A-T *
28816846-T-C 26670699-T-C *
28805688-G-C 26659541-G-C *
28805488-G-T 26659341-G-T *
6401865-T-C 6533824-T-C *
5366585-G-A 5498544-G-A *
59029437-TGGA-T 56883290-TGGA-T *
5695930-CA-C 5827889-CA-C 14×A*
13196173-C-A 11040497-C-A *
22447640-C-T 20285754-C-T DYZ19 *
4839002-CT-C 4970961-CT-C 16×T*
58994914-G-T 56848767-G-T *
28492932-A-AT 26346785-A-AT 22×T*
13460945-A-T 11305269-A-T *
13243326-T-C 11087650-T-C *
5135238-CT-C 5267197-CT-C 26×T*
13362273-T-C 11206597-T-C *
26488166-TA-T 24342019-TA-T P1_Y1 15×A*
58994848-G-T 56848701-G-T *
2925592-CT-C 3057551-CT-C 15×T*
6020688-G-GT 6152647-G-GT 23×T*
4487816-G-GA 4619775-G-GA 19×A*
7275188-TA-T 7407147-TA-T 20×A*
13195736-T-C 11040060-T-C *
5380518-C-CA 5512477-C-CA 16×A*
6780870-C-CA 6912829-C-CA 26×A*
58994924-C-A 56848777-C-A *
58980034-C-T 56833887-C-T *
13447575-A-T 11291899-A-T *
26170515-A-AGAG 24024368-A-AGAG P1_Y1 *
13711564-G-C 11555888-G-C *
25381403-C-CT 23235256-C-CT P2_r2 12×T*
59002072-G-C 56855925-G-C *
13694570-A-T 11538894-A-T *
58994920-T-G 56848773-T-G *
58994916-A-T 56848769-A-T *
22511409-A-C 20349523-A-C DYZ19 *
13447774-C-A 11292098-C-A *
58994919-T-A 56848772-T-A *
17187566-CA-C 15075686-CA-C 28×A*
13461132-A-T 11305456-A-T *
16904731-AGT-A 14792851-AGT-A 20×GT*
13246280-G-T 11090604-G-T *
3102417-AT-A 3234376-AT-A 17×T*
22441626-G-T 20279740-G-T DYZ19 *
5085067-G-A 5217026-G-A *
58980435-C-T 56834288-C-T *
13407940-A-G 11252264-A-G *
13637085-C-G 11481409-C-G *
58980741-A-C 56834594-A-C *
28796068-G-A 26649921-G-A *
59007976-A-G 56861829-A-G *
59028960-G-A 56882813-G-A *
5872243-CA-C 6004202-CA-C 15×A*
13403524-C-T 11247848-C-T *
58978210-C-T 56832063-C-T *
58978154-C-A 56832007-C-A *
58977511-C-T 56831364-C-T *
3072352-G-A 3204311-G-A *
3200161-A-C 3332120-A-C *
4499916-T-C 4631875-T-C *
5022234-G-A 5154193-G-A *
13407640-T-G 11251964-T-G *
13364246-G-C 11208570-G-C *
13637217-C-T 11481541-C-T *
5036674-G-C 5168633-G-C *
2940194-A-T 3072153-A-T *
3351835-A-G 3483794-A-G *
3477851-G-GGT 3609810-G-GGT 17×GT*
3509153-T-C 3641112-T-C *
3637683-C-T 3769642-C-T *
58994831-G-C 56848684-G-C *
4480421-C-T 4612380-C-T *
58988013-T-G 56841866-T-G *
13346776-C-CAA 11191100-C-CAA 13×A*
5497590-A-G 5629549-A-G *
5680070-G-A 5812029-G-A *
5680111-C-T 5812070-C-T *
5680126-A-G 5812085-A-G *
58988010-T-G 56841863-T-G *
9995951-A-T 10158342-A-T Y*
13241756-A-G 11086080-A-G *
59029428-G-A 56883281-G-A *
13711849-G-A 11556173-G-A *
5680165-C-A 5812124-C-A *
13637265-A-G 11481589-A-G *
13466537-C-A 11310861-C-A *
13466512-C-T 11310836-C-T *
59029513-C-G 56883366-C-G *
13466492-G-A 11310816-G-A *
58977552-A-G 56831405-A-G *
58977855-T-C 56831708-T-C *
58980084-T-A 56833937-T-A *
58980047-C-T 56833900-C-T *
58979960-A-C 56833813-A-C *
58979958-A-C 56833811-A-C *
58979942-G-A 56833795-G-A *
58979928-G-T 56833781-G-T *
13637248-C-A 11481572-C-A *
13466591-C-A 11310915-C-A *
13637234-G-C 11481558-G-C *
13637247-A-G 11481571-A-G *
13524296-T-A 11368620-T-A *
5430808-CA-C 5562767-CA-C 25×A*
22359601-T-C 20197715-T-C DYZ19 *
22359587-C-T 20197701-C-T DYZ19 *
22359579-C-G 20197693-C-G DYZ19 *
13141917-T-C 10631403-T-C *
22436845-T-C 20274959-T-C DYZ19 *
28539174-C-A 26393027-C-A 20×A*
13485666-G-T 11329990-G-T *
13468314-C-T 11312638-C-T *
4707512-C-CA 4839471-C-CA 18×A*
13466550-C-T 11310874-C-T *
13474361-G-A 11318685-G-A *
13143415-CA-C 10632901-CA-C *
13489665-G-C 11333989-G-C *
3628709-GA-G 3760668-GA-G 26×A*
59002250-CA-C 56856103-CA-C 14×A*
58978227-C-T 56832080-C-T *
15305843-A-AAAT,AAATAAT 13193942-A-AAAT 15×AAT*
13239531-G-A 11083855-G-A *
13489675-G-A 11333999-G-A *
4669265-AT-A 4801224-AT-A 15×T*
13637316-T-G 11481640-T-G *
13637295-T-C 11481619-T-C *
13637294-A-G 11481618-A-G *
13637292-A-C 11481616-A-C *
13637289-T-C 11481613-T-C *
26501083-A-G 24354936-A-G P1_Y1 *
4336555-AATAT-A 4468514-AATAT-A 9×AT*
27535678-G-A 25389531-G-A P1_Y2 *
13977156-C-G 11856450-C-G Y*
5507713-AT-A 5639672-AT-A 24×T*
13332172-T-C 11176496-T-C *
26455900-CT-C 24309753-CT-C P1_Y1 22×T*
13351776-T-C 11196100-T-C *
58985983-T-C 56839836-T-C *
58985977-C-T 56839830-C-T *
58979228-TA-T 56833081-TA-T *
21068453-T-A 18906567-T-A YY*
15421470-C-CA 13309590-C-CA 10×A*
14681188-C-CA 12569254-C-CA 13×A*
5966890-G-GT 6098849-G-GT 14×T*
3949406-C-CA 4081365-C-CA 20×A*
13143417-T-C 10632903-T-C *
13466511-T-A 11310835-T-A *
28794774-T-A 26648627-T-A *
5945467-CT-C 6077426-CT-C 25×T*
5260410-CA-C 5392369-CA-C 20×A*
13138763-C-T 10628249-C-T *
28478038-T-TATAG 26331891-T-TATAG 23×AG*
13717982-G-T 11562306-G-T *
13718005-G-A 11562329-G-A *
13347219-A-AT 11191543-A-AT 13×T*
13484087-C-A 11328411-C-A *
28642809-GACACAC-G,GAC 26496662-GACACAC-G,GAC 22×AC*
22438468-G-C 20276582-G-C DYZ19 *
13711284-G-A 11555608-G-A *
59032893-A-G 56886746-A-G *
28680938-T-TCC 26534791-T-TCC 8×C*
13469131-C-A 11313455-C-A *
13489601-A-T 11333925-A-T *
6059545-C-CA 6191504-C-CA 12×A*
14680794-G-GA 12568860-G-GA 15×A*
59026729-T-TAA 56880582-T-TAA 9×A*
59029976-G-A 56883829-G-A *
3474543-CA-C 3606502-CA-C 15×A*
13392646-G-T 11236970-G-T *
4976099-C-CA 5108058-C-CA 16×A*
28786498-T-G 26640351-T-G *
16051188-A-C 13939308-A-C YY*
13319801-A-T 11164125-A-T *
16678505-T-C 14566625-T-C **
16678569-G-T 14566689-G-T **
17068017-A-G 14956137-A-G **
13470607-C-A 11314931-C-A **
16675203-T-G 14563323-T-G **
17084132-T-C 14972252-T-C **
16658393-C-A 14546513-C-A **
13480972-G-C 11325296-G-C **
22361892-T-C 20200006-T-C DYZ19 **
26991268-G-T 24845121-G-T P1_r4 **
16657012-A-G 14545132-A-G **
22237131-A-T 20075245-A-T DYZ19 **
22237135-A-T 20075249-A-T DYZ19 **
17126056-C-T 15014176-C-T **
17126055-A-G 15014175-A-G **
22358564-A-G 20196678-A-G DYZ19 **
26684934-G-A 24538787-G-A P1_g2 **
26630412-G-A 24484265-G-A P1_g2 **
13340634-G-A 11184958-G-A **
13340628-A-T 11184952-A-T **
22358581-G-A 20196695-G-A DYZ19 **
17628993-T-C 15517113-T-C **
26630392-G-A 24484245-G-A P1_g2 **
17372747-C-A 15260867-C-A **
26991259-T-A 24845112-T-A P1_r4 **
16625155-C-A 14513275-C-A **
17245588-T-C 15133708-T-C **
59018563-G-A 56872416-G-A **
59020193-T-C 56874046-T-C **
26574593-T-C 24428446-T-C P1_g2 **
17126084-A-G 15014204-A-G **
24111790-A-G 21965643-A-G P3_b1 **
22358560-C-G 20196674-C-G DYZ19 **
17337933-C-T 15226053-C-T **
21747654-G-A 19585768-G-A **
16427314-T-C 14315434-T-C **
25200851-G-C 23054704-G-C g1 **
25654969-G-T 23508822-G-T P1_b3 **
15247669-C-T 13135755-C-T **
25467003-G-A 23320856-G-A P2_r2 **
25466968-C-A 23320821-C-A P2_r2 **
15225875-A-G 13113961-A-G **
15117703-G-A 13005790-G-A **
25359790-T-A 23213643-T-A P2_r2 **
25359737-G-C 23213590-G-C P2_r2 **
13830415-G-T 11709709-G-T **
24726242-G-T 22580095-G-T P3_b2 **
22358508-C-T 20196622-C-T DYZ19 **
59025541-G-T 56879394-G-T **
22422247-A-G 20260361-A-G DYZ19 **
14057939-T-C 11937233-T-C **
13698844-A-G 11543168-A-G **
14132837-T-A 12012131-T-A **
14166710-A-T 12046004-A-T **
13842712-C-T 11722006-C-T **
14255312-T-G 12134606-T-G **
24726267-A-T 22580120-A-T P3_b2 **
13340652-T-C 11184976-T-C **
22422241-G-T 20260355-G-T DYZ19 **
24487109-C-G 22340962-C-G **
22422246-C-G 20260360-C-G DYZ19 **
13588332-G-C 11432656-G-C **
13588338-T-C 11432662-T-C **
58865894-A-T 56724977-T-A **
13588346-C-T 11432670-C-T **
13588347-A-T 11432671-A-T **
13643666-A-G 11487990-A-G **
13222119-T-G 11066443-T-G **
15858310-T-G 13746430-T-G **
26400951-G-T 24254804-G-T P1_Y1 **
13340650-T-C 11184974-T-C **
58869860-G-A 56721011-C-T **
26396884-A-G 24250737-A-G P1_Y1 **
26276175-G-A 24130028-G-A P1_Y1 **
26146608-G-T 24000461-G-T P1_Y1 **
24573274-G-A 22427127-G-A P3_t2 **
26078525-T-C 23932378-T-C P1_Y1 **
24573275-G-A 22427128-G-A P3_t2 **
58834188-C-T 56756683-G-A **
13380592-T-A 11224916-T-A **
13588339-A-T 11432663-A-T **
13340614-T-C 11184938-T-C **
58865849-T-A 56725022-A-T **
22358525-C-G 20196639-C-G DYZ19 **
5837242-C-T 5969201-C-T **
5962943-T-A 6094902-T-A **
22476921-A-T 20315035-A-T DYZ19 **
6226053-T-A 6358012-T-A IR3_Dst **
6046020-G-T 6177979-G-T **
6177095-T-C 6309054-T-C IR3_Dst **
27958254-C-T 25812107-C-T P1_Y2 **
6496029-G-A 6627988-G-A **
20028310-A-C 17916430-A-C P5_Prx **
6497036-C-A 6628995-C-A **
6528104-A-G 6660063-A-G **
13261134-A-G 11105458-A-G **
6727174-T-C 6859133-T-C **
19376090-A-G 17264210-A-G **
6822425-T-G 6954384-T-G **
18968157-T-C 16856277-T-C **
27536119-C-T 25389972-C-T P1_Y2 **
5812783-T-G 5944742-T-G **
20330082-T-C 18168196-T-C P5_Dst **
7123195-G-A 7255154-G-A **
4225027-A-T 4356986-A-T **
21744013-C-A 19582127-C-A **
2675041-G-A 2807000-G-A **
28432302-T-G 26286155-T-G P1_gr2 **
21152077-A-G 18990191-A-G **
21847047-A-T 19685161-A-T **
28191529-T-C 26045382-T-C P1_b4 **
21847053-G-T 19685167-G-T **
21059831-G-A 18897945-G-A **
20533607-T-C 18371721-T-C P5_Dst **
21967496-G-C 19805610-G-C **
4331681-G-T 4463640-G-T **
28120039-T-G 25973892-T-G P1_b4 **
58836642-C-T 56754229-G-A **
21059785-G-T 18897899-G-T **
4844189-A-G 4976148-A-G **
20648438-C-T 18486552-C-T P4_Prx **
58865917-C-T 56724954-G-A **
6999335-G-A 7131294-G-A **
22435253-C-G 20273367-C-G DYZ19 **
13480929-A-T 11325253-A-T **
9414530-G-T 9576921-G-T **
18278412-C-T 16166532-C-T P6_Prx **
9414537-C-T 9576928-C-T **
23077675-T-C 20915789-T-C **
58999130-A-C 56852983-A-C **
9414545-C-T 9576936-C-T **
9414531-C-T 9576922-C-T **
23077670-T-C 20915784-T-C **
9824956-C-T 9987347-C-T **
22349230-A-G 20187344-A-G DYZ19 **
10003533-G-T 10165924-G-T **
3097021-T-C 3228980-T-C **
22264830-T-C 20102944-T-C DYZ19 **
27127191-C-A 24981044-C-A P1_g3 **
22982973-T-C 20821087-T-C **
7631499-C-T 7763458-C-T **
27056065-A-T 24909918-A-T P1_r4 **
22262470-T-A 20100584-T-A DYZ19 **
7475271-T-C 7607230-T-C IR1_L **
7474810-A-C 7606769-A-C IR1_L **
28800100-T-C 26653953-T-C ***
28680957-A-C 26534810-A-C ***
28800109-G-C 26653962-G-C ***
28806059-T-A 26659912-T-A ***
58863023-A-C 56727848-T-G ***
22447664-T-A 20285778-T-A DYZ19 ***
58983172-C-G 56837025-C-G ***
15215368-A-G 13103454-A-G ***
17622132-T-G 15510252-T-G ***
18212256-G-T 16100376-G-T ***
58989945-A-G 56843798-A-G ***
28786474-T-C 26640327-T-C ***
17785991-A-G 15674111-A-G ***
21322249-C-T 19160363-C-T ***
14575285-T-C 12463485-T-C ***
28457681-G-A 26311534-G-A ***
28812773-G-A 26666626-G-A ***
58827153-G-A 56763718-C-T ***
28596846-G-T 26450699-G-T ***
22874407-G-A 20712521-G-A ***
17518771-G-A 15406891-G-A ***
58866079-A-T 56724792-T-A ***
28801235-C-T 26655088-C-T ***
16945328-G-T 14833448-G-T ***
17107994-T-C 14996114-T-C ***
24264891-C-T 22118744-C-T P3_b1 ***
18932563-G-A 16820683-G-A ***
58977506-A-T 56831359-A-T ***
19492347-G-T 17380467-G-T ***
27575959-G-A 25429812-G-A P1_Y2 ***
18795049-C-T 16683169-C-T ***
28800110-T-A 26653963-T-A ***
18627296-C-A 16515416-C-A ***
17170296-G-A 15058416-G-A ***
24303572-G-A 22157425-G-A P3_t1 ***
24343511-A-G 22197364-A-G P3_t1 ***
22204392-C-A 20042506-C-A ***
28800092-G-T 26653945-G-T ***
16051173-A-C 13939293-A-C ***
22509874-C-T 20347988-C-T DYZ19 ***
15533322-A-T 13421442-A-T ***
58977497-C-T 56831350-C-T ***
58994851-T-C 56848704-T-C ***
58976987-C-T 56830840-C-T ***
28610477-T-C 26464330-T-C ***
26501088-A-G 24354941-A-G P1_Y1 ***
20603820-A-G 18441934-A-G P5_Dst 10×AG***
28805831-T-A 26659684-T-A ***
58976976-C-G 56830829-C-G ***
22260176-C-G 20098290-C-G DYZ19 ***
22260211-T-C 20098325-T-C DYZ19 ***
22307460-G-A 20145574-G-A DYZ19 ***
13977178-A-G 11856472-A-G ***
4196934-C-CA 4328893-C-CA 16×A***
13195771-G-T 11040095-G-T ***
13141970-C-G 10631456-C-G ***
5059202-T-G 5191161-T-G ***
7258755-CA-C 7390714-CA-C 25×A***
4414167-CT-C 4546126-CT-C 18×T***
22508646-C-A 20346760-C-A DYZ19 ***
22508403-C-A 20346517-C-A DYZ19 ***
22260215-A-T 20098329-A-T DYZ19 ***
13447643-G-A 11291967-G-A ***
24278334-A-G 22132187-A-G P3_b1 ***
58843100-G-C 56747771-C-G ***
58982925-C-G 56836778-C-G ***
28721499-C-A 26575352-C-A 18×A***
13460941-C-A 11305265-C-A ***
58980074-T-A 56833927-T-A ***
4965185-TA-T 5097144-TA-T 20×A***
13461179-G-C 11305503-G-C ***
13707001-T-A 11551325-T-A ***
13704469-A-T 11548793-A-T ***
13859431-A-G 11738725-A-G ***
13468160-C-G 11312484-C-G ***
22359646-G-A 20197760-G-A DYZ19 ***
13637319-A-G 11481643-A-G ***
58982932-A-C 56836785-A-C ***
13488369-C-T 11332693-C-T ***
22510212-A-C 20348326-A-C DYZ19 ***
5017614-A-C 5149573-A-C 18×AC***
2763650-G-A 2895609-G-A ***
13450344-C-T 11294668-C-T ***
13450341-T-C 11294665-T-C ***
13447652-T-G 11291976-T-G ***
13485574-A-T 11329898-A-T ***
13448833-C-T 11293157-C-T ***
16228018-A-G 14116138-A-G ***
5787575-AT-A 5919534-AT-A 15×T***
22508009-G-T 20346123-G-T DYZ19 ***
58983115-C-G 56836968-C-G ***
58982955-C-T 56836808-C-T ***
58983081-C-G 56836934-C-G ***
13195657-A-T 11039981-A-T ***
13470595-C-A 11314919-C-A ***
13488373-G-A 11332697-G-A ***
3501955-CAA-C 3633914-CAA-C 22×A***
13933716-CA-C 11813010-CA-C 17×A***
22446797-T-A 20284911-T-A DYZ19 ***
22446802-T-C 20284916-T-C DYZ19 ***
13482135-A-T 11326459-A-T ***
13448843-C-G 11293167-C-G ***
6586786-C-CT 6718745-C-CT 22×T***
13489679-C-A 11334003-C-A ***
13488365-G-A 11332689-G-A ***
13485674-A-G 11329998-A-G ***
5388234-T-C 5520193-T-C ***
13384404-A-G 11228728-A-G ***
13368177-G-A 11212501-G-A ***
13262338-G-T 11106662-G-T ***
13465071-G-C 11309395-G-C ***
13465048-C-G 11309372-C-G ***
13465038-G-T 11309362-G-T ***
13363175-C-T 11207499-C-T ***
16003268-A-C 13891388-A-C ***
13259808-G-C 11104132-G-C ***
5842119-T-C 5974078-T-C ***
5366381-A-G 5498340-A-G ***
13485645-T-A 11329969-T-A ***
4116272-G-A 4248231-G-A ***
5769175-CT-C 5901134-CT-C 17×T***
6605511-T-TTA 6737470-T-TTA 14×TA***
13494555-A-AT 11338879-A-AT 13×T***
3558246-TA-T 3690205-TA-T 16×A***
21227375-C-CTT 19065489-C-CTT 22×T***
58833950-C-T 56756921-G-A ***
58979989-T-C 56833842-T-C ***
13709882-T-C 11554206-T-C ***
22307437-C-T 20145551-C-T DYZ19 ***
13447673-C-T 11291997-C-T ***
13488362-C-A 11332686-C-A ***
13483376-C-T 11327700-C-T ***
58976584-G-A 56830437-G-A ***
7996850-G-A 8128809-G-A ***
13256858-G-GT 11101182-G-GT 18×T***
3511856-C-CT 3643815-C-CT 15×T***
25379022-A-C 23232875-A-C P2_r2 ***
59031098-T-C 56884951-T-C ***
59024438-C-T 56878291-C-T ***
59015785-G-A 56869638-G-A ***
59013336-C-T 56867189-C-T ***
59012208-A-T 56866061-A-T ***
59008980-T-C 56862833-T-C ***
58975908-C-T 56829761-C-T ***
13489140-C-A 11333464-C-A ***
28812994-G-C 26666847-G-C A4541 ***
22509635-G-A 20347749-G-A DYZ19 ***
22509208-C-G 20347322-C-G DYZ19 ***
22447538-G-T 20285652-G-T DYZ19 ***
22447525-T-A 20285639-T-A DYZ19 ***
13868556-G-A 11747850-G-A ***
13868540-C-A 11747834-C-A ***
13694527-G-T 11538851-G-T ***
13688976-G-T 11533300-G-T ***
13634792-C-T 11479116-C-T ***
13489192-G-C 11333516-G-C ***
58993231-A-T 56847084-A-T ***
13451500-A-G 11295824-A-G ***
13977174-T-C 11856468-T-C ***
13450406-C-T 11294730-C-T ***
13482328-A-G 11326652-A-G ***
13470592-C-G 11314916-C-G ***
13469128-C-T 11313452-C-T ***
13468396-C-G 11312720-C-G ***
13468044-C-T 11312368-C-T ***
13464997-T-A 11309321-T-A ***
13464990-T-A 11309314-T-A ***
13458767-A-T 11303091-A-T ***
13452913-C-A 11297237-C-A ***
13452890-A-G 11297214-A-G ***
13449103-C-T 11293427-C-T ***
13486585-A-G 11330909-A-G ***
13351344-G-A 11195668-G-A ***
13351333-C-T 11195657-C-T ***
13345946-C-A 11190270-C-A ***
13345944-G-C 11190268-G-C ***
13326172-T-G 11170496-T-G ***
13196159-A-T 11040483-A-T ***
13140205-C-G 10629691-C-G ***
13136951-G-T 10626437-G-T ***
9992232-T-A 10154623-T-A ***
8971574-G-T 9133965-G-T ***
13485560-A-C 11329884-A-C ***
13489546-C-G 11333870-C-G ***
8281710-T-C 8413669-T-C ***
13691855-A-T 11536179-A-T ***
13813556-G-T 11692850-G-T ***
13730401-A-T 11574725-A-T ***
13723206-T-G 11567530-T-G ***
13722847-C-T 11567171-C-T ***
13719330-A-G 11563654-A-G ***
13715008-A-G 11559332-A-G ***
13708074-A-C 11552398-A-C ***
13706028-G-A 11550352-G-A ***
13694719-A-G 11539043-A-G ***
13692155-T-C 11536479-T-C ***
13691827-G-C 11536151-G-C ***
13489577-G-T 11333901-G-T ***
13690047-G-C 11534371-G-C ***
13690008-T-A 11534332-T-A ***
13688981-C-A 11533305-C-A ***
13688980-C-A 11533304-C-A ***
13644630-T-C 11488954-T-C ***
13498437-A-G 11342761-A-G ***
13498429-C-T 11342753-C-T ***
13498392-A-T 11342716-A-T ***
13489726-C-G 11334050-C-G ***
13489641-C-A 11333965-C-A ***
13489593-A-C 11333917-A-C ***
8785832-A-G 8917791-A-G ***
7967645-T-A 8099604-T-A ***
19022304-T-C 16910424-T-C ***
13708065-T-C 11552389-T-C ***
13141865-C-G 10631351-C-G ***
4511163-CAAA-C 4643122-CAAA-C 26×A***
5220159-C-CT 5352118-C-CT 21×T***
13707553-G-A 11551877-G-A ***
58980800-C-G 56834653-C-G ***
28805872-A-C 26659725-A-C ***
22508404-T-G 20346518-T-G DYZ19 ***
58982933-C-T 56836786-C-T ***
13709499-T-C 11553823-T-C ***
13708069-A-T 11552393-A-T ***
13485704-A-T 11330028-A-T ***
13469090-C-T 11313414-C-T ***
13485678-C-A 11330002-C-A ***
13485673-T-C 11329997-T-C ***
13468568-G-T 11312892-G-T ***
13468555-G-A 11312879-G-A ***
13195954-A-C 11040278-A-C ***
13195947-T-A 11040271-T-A ***
13141899-C-T 10631385-C-T ***
13460944-G-C 11305268-G-C ***
13461218-T-G 11305542-T-G ***
6130166-A-C 6262125-A-C ***
6918580-T-A 7050539-T-A ***
13450273-C-T 11294597-C-T ***
13571998-T-C 11416322-T-C ***
6867834-T-C 6999793-T-C ***
3549675-C-T 3681634-C-T ***
6776288-G-A 6908247-G-A ***
6450034-C-G 6581993-C-G ***
5846220-C-A 5978179-C-A ***
5772601-G-A 5904560-G-A ***
5570049-T-A 5702008-T-A ***
5453424-C-T 5585383-C-T ***
5434020-G-T 5565979-G-T 13×T***
4874898-C-G 5006857-C-G ***
4634558-C-CA 4766517-C-CA 28×A***
4225760-G-T 4357719-G-T ***
3444838-G-A 3576797-G-A ***
13708052-G-A 11552376-G-A ***
3333246-C-T 3465205-C-T ***
3333245-T-C 3465204-T-C ***
3263294-G-T 3395253-G-T ***
3041026-T-C 3172985-T-C ***
2957650-A-G 3089609-A-G ***
58978164-C-T 56832017-C-T ***
58978129-C-T 56831982-C-T ***
58976859-T-A 56830712-T-A ***
22510093-T-C 20348207-T-C DYZ19 ***
22508738-G-A 20346852-G-A DYZ19 ***
16889477-T-G 14777597-T-G ***
22165202-C-CA 20003316-C-CA 28×A***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: CLDE41567483795532908403015
Used in age calculations1567483795532908403015
Counts of SNPs20977
Variant counts last updated 2018-01-28 00:02:18.



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