Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > DF21/S192 > FGC3213 > ZZ1 > S3058 > S424 > LSC > LSC1 > LSC1a > Z36747 > Y40070

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
237552
BigY2
237552
Manual
Edits
19978396-A-T 17866516-A-T P5_Prx ***A*
22234506-C-A 20072620-C-A DYZ19 A*
28817304-T-G 26671157-T-G A*
19698566-T-TA 17586686-T-TA FGC12993 P5_Prx 9×AA*
20013058-T-TG 17901178-T-TG P5_Prx 10×G***A*
13717221-G-T 11561545-G-T ++
17906475-C-T 15794595-C-T YY++
9868411-T-C 10030802-T-C YY++
7399102-A-G 7531061-A-G Y38949 YY++
8146791-T-TA 8278750-T-TA 9×A++
6843217-C-A 6975176-C-A YY****
13449815-T-C,G 11294139-T-C,G *
17578390-C-A 15466510-C-A YY****
28792057-G-T 26645910-G-T *
16829415-C-A 14717535-C-A **
16405251-C-A 14293371-C-A **
16488104-C-A 14376224-C-A **
16503812-A-G 14391932-A-G **
16506215-TG-T 14394335-TG-T **
16506242-C-A 14394362-C-A **
16571937-G-A 14460057-G-A **
16681384-T-C 14569504-T-C **
16629220-C-A 14517340-C-A **
16758594-C-A 14646714-C-A **
16805447-C-A 14693567-C-A **
16708508-G-T 14596628-G-T **
16783241-C-A 14671361-C-A **
16370880-T-C 14259000-T-C **
16713187-A-G 14601307-A-G **
16750197-T-C 14638317-T-C **
16370881-T-A 14259001-T-A **
16309421-AG-A 14197541-AG-A **
16349928-C-A 14238048-C-A **
15903411-C-A 13791531-C-A **
15583576-A-G 13471696-A-G **
15583577-T-C 13471697-T-C **
15583583-G-A 13471703-G-A **
15589556-C-A 13477676-C-A **
15605818-A-G 13493938-A-G **
15649031-A-G 13537151-A-G **
15668564-T-C 13556684-T-C **
15668597-A-G 13556717-A-G **
15764050-C-A 13652170-C-A **
15818375-C-A 13706495-C-A **
15841812-G-A 13729932-G-A **
15975114-C-A 13863234-C-A **
16344634-T-C 14232754-T-C **
16042719-A-T 13930839-A-T **
16064888-AC-A 13953008-AC-A **
16070080-C-A 13958200-C-A **
16179546-C-A 14067666-C-A Y27112 **
16186605-C-T 14074725-C-T **
16188181-CTTTTTT-C 14076301-CTTTTTT-C 16×T**
16192704-C-A 14080824-C-A **
16212590-G-A 14100710-G-A **
16275928-G-T 14164048-G-T **
16297146-T-A 14185266-T-A **
16298452-C-A 14186572-C-A **
16852854-G-T 14740974-G-T **
16830970-C-A 14719090-C-A **
29847-G-A **
16865135-C-A 14753255-C-A **
17713991-C-T 15602111-C-T **
17580696-T-C 15468816-T-C **
17581333-A-G 15469453-A-G **
17581343-G-GA 15469463-G-GA 9×A**
17594028-C-A 15482148-C-A **
17605683-G-A 15493803-G-A **
17612895-G-T 15501015-G-T **
17616797-C-A 15504917-C-A **
17646844-C-A 15534964-C-A F21972 **
17650219-T-C 15538339-T-C **
17682441-C-A 15570561-C-A **
17713985-C-T 15602105-C-T **
17803177-C-A 15691297-C-A **
17506568-T-A 15394688-T-A **
17875900-C-A 15764020-C-A **
17876593-C-A 15764713-C-A **
17923178-G-A 15811298-G-A **
17923180-A-G 15811300-A-G **
17923182-T-C 15811302-T-C **
17942103-C-T 15830223-C-T 11×T**
17944219-T-C 15832339-T-C **
17972794-A-G 15860914-A-G **
17998071-C-T 15886191-C-T P7_Gap **
18017144-TA-T 15905264-TA-T **
18060241-C-A 15948361-C-A **
17559844-C-A 15447964-C-A **
17484946-C-A 15373066-C-A **
16871325-C-A 14759445-C-A **
17159077-C-T 15047197-C-T **
15583562-A-G 13471682-A-G **
16897538-G-T 14785658-G-T **
16927681-C-A 14815801-C-A **
16967213-TA-T 14855333-TA-T **
16973967-T-A 14862087-T-A **
16988961-T-C 14877081-T-C **
17058465-G-T 14946585-G-T **
17081277-A-T 14969397-A-T **
17081301-A-ATT 14969421-A-ATT **
17099253-C-A 14987373-C-A **
17155989-C-A 15044109-C-A **
17167775-G-A 15055895-G-A **
17479316-C-A 15367436-C-A **
17167780-A-G 15055900-A-G **
17183480-T-A 15071600-T-A **
17203473-C-A 15091593-C-A **
17289804-G-T 15177924-G-T **
17289864-C-A 15177984-C-A **
17335047-C-A 15223167-C-A **
17352448-C-A 15240568-C-A **
17363355-G-T 15251475-G-T **
17369516-T-C 15257636-T-C **
17415330-C-A 15303450-C-A **
17451368-C-A 15339488-C-A **
15583574-G-A 13471694-G-A **
15468159-C-A 13356279-C-A **
15583552-A-T 13471672-A-T **
14396561-C-A 12275857-C-A **
14229773-C-A 12109067-C-A **
14230774-T-C 12110068-T-C **
14284268-C-A 12163562-C-A **
14286150-T-A 12165444-T-A **
14343135-C-A 12222430-C-A **
14373767-A-G 12253063-A-G **
14373777-A-G 12253073-A-G **
14374753-C-A 12254049-C-A **
14384979-C-G 12264275-C-G **
14389202-C-A 12268498-C-A **
14398760-C-A 12278056-C-A **
14103251-ATATG-A 11982545-ATATG-A 6×TATG**
14423214-C-A 12302489-C-A **
14429288-C-A 12308563-C-A **
14465421-A-G 12344694-A-G **
14483927-C-A 12363196-C-A **
14488649-C-A 12367918-C-A **
14515191-A-G 12403396-A-G **
14515201-G-A 12403406-G-A **
14546351-C-A 12434552-C-A **
14547450-C-A 12435651-C-A **
14553358-C-A 12441559-C-A **
14144113-T-C 12023407-T-C **
14045562-C-A 11924856-C-A **
14573460-AT-A 12461660-AT-A **
13677126-A-T 11521450-A-T **
13445865-C-A 11290189-C-A **
13462479-C-A 11306803-C-A **
13469399-G-T 11313723-G-T **
13478225-C-A 11322549-C-A **
13487091-A-T 11331415-A-T **
13487711-C-A 11332035-C-A **
13495833-C-A 11340157-C-A **
13575707-C-A 11420031-C-A **
13579831-C-A 11424155-C-A **
13653898-C-A 11498222-C-A **
13677133-T-G 11521457-T-G **
14025369-C-A 11904663-C-A **
11647156-G-T **
11658341-T-C **
13816315-C-A 11695609-C-A **
13816318-C-G 11695612-C-G **
13816322-T-A 11695616-T-A **
13816331-C-G 11695625-C-G **
13829004-A-T 11708298-A-T **
13989156-C-A 11868450-C-A **
13996758-C-A 11876052-C-A **
13997156-C-A 11876450-C-A **
14562733-C-A 12450933-C-A **
14602269-C-A 12490471-C-A **
15583535-C-T 13471655-C-T **
15410525-T-G 13298645-T-G **
15338801-C-T 13226919-C-T **
15342411-C-T 13230530-C-T **
15357918-G-C 13246037-G-C **
15365776-C-A 13253896-C-A **
15382707-C-A 13270827-C-A **
15386525-T-C 13274645-T-C **
15403015-C-A 13291135-C-A **
15403539-C-A 13291659-C-A **
15403544-C-T 13291664-C-T **
15410475-A-C 13298595-A-C **
15410527-A-G 13298647-A-G **
15258374-C-A 13146458-C-A **
15410551-A-G 13298671-A-G **
15420121-T-G 13308241-T-G **
15420132-C-CAA 13308252-C-CAA 18×A**
15446091-C-A 13334211-C-A **
18184854-T-C 16072974-T-C **
15579544-G-A 13467664-G-A **
15579545-G-T 13467665-G-T **
15579555-G-T 13467675-G-T **
15583532-G-A 13471652-G-A **
15583534-G-T 13471654-G-T **
15305616-A-G 13193715-A-G **
15211054-G-T 13099140-G-T **
14673498-G-T 12561564-G-T **
14884530-C-A 12772596-C-A **
14678214-G-A 12566280-G-A **
14718153-G-T 12606221-G-T **
14728692-C-A 12616760-C-A **
14757427-C-G 12645496-C-G **
14757729-C-A 12645798-C-A **
14762243-G-A 12650312-G-A **
14762254-T-C 12650323-T-C **
14762255-G-A 12650324-G-A **
14762270-A-T 12650339-A-T **
14789563-T-C 12677634-T-C **
14893068-C-A 12781134-C-A **
15126853-C-A 13014940-C-A **
14913020-C-A 12801087-C-A **
14929109-A-G 12817174-A-G **
14929114-A-G 12817179-A-G **
14938287-C-A 12826362-C-A **
14949402-CCCATCTGG-C 12837476-CCCATCTGG-C **
14949735-C-T 12837809-C-T **
15020799-T-A 12908888-T-A **
15065796-A-G 12953888-A-G **
15080574-C-A 12968664-C-A **
15107536-C-A 12995623-C-A **
18130455-C-A 16018575-C-A **
18385251-T-TG 16273371-T-TG P6_Gap **
18218860-G-A 16106980-G-A **
23430240-C-A 21268354-C-A **
23152559-C-A 20990673-C-A **
23267308-C-T 21105422-C-T **
23280695-C-A 21118809-C-A **
23311288-G-TTT 21149402-G-TTT **
23315830-T-C 21153944-T-C **
23315832-C-A 21153946-C-A **
23315840-C-T 21153954-C-T **
23315841-A-G 21153955-A-G **
23389618-T-C 21227732-T-C **
23442795-C-A 21280909-C-A **
23138201-A-G 20976315-A-G **
23509165-G-T 21347279-G-T **
23560829-T-C 21398943-T-C **
23723540-T-A 21561654-T-A **
23765141-C-A 21603255-C-A **
23831469-T-A 21669583-T-A **
23848013-C-A 21686127-C-A **
23961101-C-A 21814954-C-A **
23961211-C-T 21815064-C-T **
23961218-C-T 21815071-C-T **
23961219-A-G 21815072-A-G **
23145394-C-A 20983508-C-A **
23104407-C-T 20942521-C-T **
24409333-G-T 22263186-G-T **
22802305-C-A 20640419-C-A **
22128721-G-A 19966835-G-A **
22172799-C-A 20010913-C-A ALK82 **
22204737-T-C 20042851-T-C **
22513145-C-T 20351259-C-T **
22513155-A-C 20351269-A-C **
22513160-A-G 20351274-A-G **
22727426-T-C 20565540-T-C **
22734530-T-C 20572644-T-C **
22755679-C-T 20593793-C-T **
22768224-A-G 20606338-A-G **
22864346-C-A 20702460-C-A **
23074694-C-A 20912808-C-A **
22904201-C-A 20742315-C-A **
22914070-C-A 20752184-C-A **
22936471-C-T 20774585-C-T **
22936492-A-T 20774606-A-T **
22936493-A-G 20774607-A-G **
22936495-C-T 20774609-C-T **
22960245-C-A 20798359-C-A **
22965286-T-A 20803400-T-A **
23018789-C-A 20856903-C-A **
23025642-C-A 20863756-C-A **
23961219-A-AG 21815072-A-AG **
24440639-G-T 22294492-G-T **
22102482-C-A 19940596-C-A **
56826145-C-A **
28698602-C-A 26552455-C-A **
28745691-ATGTGCATATG-A 26599544-ATGTGCATATG-A **
28756344-C-A 26610197-C-A **
28764420-G-T 26618273-G-T **
56724893-G-T **
56763526-G-C **
56763556-G-C **
56826123-C-A **
56826133-G-C **
56826142-C-A **
56826148-G-C **
28661400-C-A 26515253-C-A **
56826158-C-G **
56830296-T-TCAATTCCATA **
56832394-G-A **
56832399-G-A **
56850704-C-A **
56850714-C-CA **
56850716-AG-A **
56850731-G-T **
56850736-G-T **
56850762-T-C **
28674696-G-A 26528549-G-A **
28643943-C-T 26497796-C-T **
24440663-G-T 22294516-G-T **
27844540-T-TC 25698393-T-TC P1_Y2 **
24523593-CAAA-C 22377446-CAAA-C 13×A**
24872821-G-T 22726674-G-T IR1_R **
24878196-G-T 22732049-G-T g1 **
25709318-G-T 23563171-G-T P1_b3 **
25946566-T-TC 23800419-T-TC P1_Y1 **
26066360-GT-G 23920213-GT-G P1_Y1 13×T**
26066374-GTC-G 23920227-GTC-G P1_Y1 **
26096622-C-A 23950475-C-A P1_Y1 **
26344219-G-T 24198072-G-T P1_Y1 **
27585939-GAC-G 25439792-GAC-G P1_Y2 **
27862520-C-A 25716373-C-A P1_Y2 **
28626684-A-G 26480537-A-G **
27889319-AC-A 25743172-AC-A P1_Y2 **
27889322-C-CT 25743175-C-CT P1_Y2 **
27997989-G-T 25851842-G-T P1_Y2 **
28463840-C-A 26317693-C-A **
28484199-C-A 26338052-C-A **
28519445-TC-T 26373298-TC-T **
28521260-C-A 26375113-C-A **
28621456-G-T 26475309-G-T **
28622696-C-A 26476549-C-A **
28623168-C-A 26477021-C-A **
22127095-C-A 19965209-C-A **
22097234-C-T 19935348-C-T **
18238916-C-A 16127036-C-A **
19271955-C-A 17160075-C-A **
19070102-C-A 16958222-C-A **
19073913-C-A 16962033-C-A **
19119512-T-C 17007632-T-C **
19128614-C-A 17016734-C-A **
19138848-G-A 17026968-G-A **
19143207-C-A 17031327-C-A **
19179233-A-G 17067353-A-G **
19183552-T-A 17071672-T-A **
19209758-G-A 17097878-G-A **
19213553-G-T 17101673-G-T **
19290781-C-A 17178901-C-A **
19022426-A-G 16910546-A-G **
19319949-C-A 17208069-C-A **
19324788-C-A 17212908-C-A **
19346738-A-G 17234858-A-G **
19346742-C-T 17234862-C-T **
19346743-A-G 17234863-A-G **
19346747-A-G 17234867-A-G **
19346769-G-A 17234889-G-A **
19346775-T-C 17234895-T-C **
19346777-T-G 17234897-T-G **
19346779-T-A 17234899-T-A **
19061204-A-T 16949324-A-T **
18987251-T-C 16875371-T-C **
19402783-T-C 17290903-T-C **
18593458-T-C 16481578-T-C **
18239116-C-A 16127236-C-A **
18267557-A-G 16155677-A-G **
18296630-C-T 16184750-C-T P6_Prx **
18337107-G-T 16225227-G-T P6_Prx **
18384415-C-A 16272535-C-A P6_Gap **
13349892-C-A 11194216-C-A **
18390196-A-G 16278316-A-G P6_Gap **
18395750-T-A 16283870-T-A P6_Gap **
18398221-AT-A 16286341-AT-A P6_Gap **
18425437-G-T 16313557-G-T P6_Gap **
18646060-T-G 16534180-T-G **
18986529-C-A 16874649-C-A **
18654721-C-A 16542841-C-A **
18654736-C-A 16542856-C-A **
18659568-T-C 16547688-T-C **
18716647-C-A 16604767-C-A **
18723921-C-T 16612041-C-T **
18724087-T-G 16612207-T-G **
18859831-G-T 16747951-G-T **
18883883-C-T 16772003-C-T Y42724 **
18924975-C-A 16813095-C-A **
18943866-C-A 16831986-C-A **
19346782-G-A 17234902-G-A **
19424604-C-G 17312724-C-G **
22056096-C-A 19894210-C-A **
21629450-G-GC 19467564-G-GC **
21306528-C-A 19144642-C-A **
21405959-C-T 19244073-C-T **
21428526-C-A 19266640-C-A **
21477012-A-G 19315126-A-G **
21547488-C-A 19385602-C-A **
21587649-T-A 19425763-T-A **
21616038-G-T 19454152-G-T **
21616674-C-A 19454788-C-A **
21629446-A-T 19467560-A-T **
21629447-C-T 19467561-C-T Z33657 **
21629454-A-T 19467568-A-T **
21222157-T-G 19060271-T-G **
21629456-T-A 19467570-T-A **
21629465-T-C 19467579-T-C **
21629482-T-C 19467596-T-C **
21673329-T-G 19511443-T-G **
21737720-A-G 19575834-A-G **
21772579-G-T 19610693-G-T **
21775425-C-A 19613539-C-A **
21850817-T-A 19688931-T-A **
21861381-G-T 19699495-G-T **
22045455-C-A 19883569-C-A **
21300389-C-A 19138503-C-A **
21182600-C-A 19020714-C-A **
19433216-A-G 17321336-A-G **
19827425-G-T 17715545-G-T P5_Prx **
19433224-C-A 17321344-C-A **
19433225-T-C 17321345-T-C **
19433230-G-A 17321350-G-A **
19433236-G-T 17321356-G-T **
19443401-C-A 17331521-C-A **
19447433-T-C 17335553-T-C **
19497302-C-A 17385422-C-A **
19517176-C-A 17405296-C-A **
19548271-C-A 17436391-C-A **
19799937-C-G 17688057-C-G P5_Prx **
19844732-T-A 17732852-T-A P5_Prx **
21177350-A-G 19015464-A-G **
20025447-CT-C 17913567-CT-C P5_Prx **
20326037-G-TTTT 18164151-G-TTTT P5_Dst **
20622536-A-G 18460650-A-G P4_Prx **
20802716-C-A 18640830-C-A P4_Gap **
20824929-A-G 18663043-A-G P4_Gap **
21076075-T-C 18914189-T-C **
21095650-A-G 18933764-A-G **
21132137-C-A 18970251-C-A **
21148588-TCAA-T 18986702-TCAA-T **
21174497-C-A 19012611-C-A **
13435129-C-A 11279453-C-A **
14229763-A-C 12109057-A-C **
13323506-A-C 11167830-A-C **
8085296-C-A 8217255-C-A **
13465674-C-G 11309998-C-G **
5308684-G-T 5440643-G-T **
5421297-C-A 5553256-C-A **
5458839-C-A 5590798-C-A **
5546672-A-G 5678631-A-G **
14216609-C-A 12095903-C-A **
5577237-C-A 5709196-C-A **
27290721-G-A 25144574-G-A P1_g3 **
8149268-C-A 8281227-C-A **
10807293-T-C **
8110454-C-A 8242413-C-A **
5595698-C-A 5727657-C-A **
8085312-C-T 8217271-C-T **
5687613-T-TA 5819572-T-TA 8×A**
58978552-G-T 56832405-G-T **
5261656-A-G 5393615-A-G **
5720651-A-G 5852610-A-G **
7708951-C-A 7840910-C-A **
9451418-A-C 9613809-A-C **
7713999-C-T 7845958-C-T **
7725726-A-G 7857685-A-G **
5734622-T-C 5866581-T-C **
7837317-A-G 7969276-A-G **
7886455-C-A 8018414-C-A **
8073516-C-A 8205475-C-A **
5690281-C-T 5822240-C-T **
7922286-C-A 8054245-C-A **
7939225-G-A 8071184-G-A **
7989314-C-A 8121273-C-A **
7992184-C-A 8124143-C-A **
8046501-T-C 8178460-T-C **
5287167-T-C 5419126-T-C **
8398963-C-A 8530922-C-A **
7703675-A-G 7835634-A-G **
8731094-T-C 8863053-T-C **
11030185-CTCCAT-C **
4437930-C-A 4569889-C-A **
8714947-A-T 8846906-A-T **
4258051-G-T 4390010-G-T **
8715157-G-T 8847116-G-T **
8723593-C-A 8855552-C-A **
4241701-T-G 4373660-T-G **
4859036-G-T 4990995-G-T **
8736474-A-T 8868433-A-T **
4123677-A-G 4255636-A-G **
8766434-C-T 8898393-C-T **
10821913-A-T **
8832157-C-A 8964116-C-A **
3966909-G-T 4098868-G-T **
4805073-C-A 4937032-C-A **
8694271-C-A 8826230-C-A **
11030130-A-T **
11030143-C-G **
5241152-C-A 5373111-C-A **
5205287-AT-A 5337246-AT-A 9×T**
5200609-G-T 5332568-G-T **
5107445-A-G 5239404-A-G **
8481820-G-TT 8613779-G-TT **
8513596-TA-T 8645555-TA-T **
8536231-C-A 8668190-C-A **
4930682-C-A 5062641-C-A **
8566827-C-A 8698786-C-A **
5046731-C-A 5178690-C-A **
5041453-G-A 5173412-G-A **
8654012-C-A 8785971-C-A **
11030175-T-G **
8668954-G-T 8800913-G-T **
4351403-A-C 4483362-A-C **
21550187-T-C 19388301-T-C **
13442571-C-A 11286895-C-A **
6306005-A-T 6437964-A-T IR3_Dst **
6873273-C-A 7005232-C-A **
6881048-C-T 7013007-C-T **
6886742-G-C 7018701-G-C **
6944864-C-A 7076823-C-A **
13323485-CCCCACCGACA-C 11167809-CCCCACCGACA-C **
6967808-C-A 7099767-C-A **
7028739-C-A 7160698-C-A **
6835511-T-C 6967470-T-C **
6305926-A-G 6437885-A-G IR3_Dst **
6079487-G-T 6211446-G-T **
7101137-T-C 7233096-T-C **
7102527-T-G 7234486-T-G **
7130318-C-A 7262277-C-A **
20332111-C-A 18170225-C-A P5_Dst 30×A**
6858567-C-A 6990526-C-A **
6827997-C-A 6959956-C-A **
7161105-C-A 7293064-C-A **
6755733-C-A 6887692-C-A **
6582820-C-A 6714779-C-A **
6429529-C-A 6561488-C-A **
13469400-C-T 11313724-C-T **
6671038-C-A 6802997-C-A **
6694107-T-C 6826066-T-C **
6732694-C-A 6864653-C-A **
9945539-C-A 10107930-C-A **
6369850-G-T 6501809-G-T **
6395094-G-C 6527053-G-C **
6766108-C-A 6898067-C-A **
6767975-A-G 6899934-A-G **
8555721-CA-C 8687680-CA-C 9×A**
6793433-C-A 6925392-C-A **
6798634-C-A 6930593-C-A **
7160461-T-A 7292420-T-A **
7162082-C-A 7294041-C-A **
3079580-G-A 3211539-G-A **
7621054-C-A 7753013-C-A **
7524709-A-T 7656668-A-T **
5932483-G-GT 6064442-G-GT 9×T**
7591319-C-A 7723278-C-A **
16539869-G-T 14427989-G-T **
7619022-C-A 7750981-C-A **
7619109-C-A 7751068-C-A **
13447897-G-GTTGCATTCCA 11292221-G-GTTGCATTCCA **
58978551-G-A 56832404-G-A **
5807386-T-C 5939345-T-C **
5761596-C-A 5893555-C-A **
5278135-G-A 5410094-G-A FGC69268 **
4129645-CAT-C 4261604-CAT-C **
7657048-T-C 7789007-T-C **
7669659-G-A 7801618-G-A **
7429660-C-A 7561619-C-A **
7375049-C-A 7507008-C-A **
7189969-A-G 7321928-A-G **
7242693-G-A 7374652-G-A **
7189983-A-G 7321942-A-G **
7190633-C-G 7322592-C-G **
7196576-T-A 7328535-T-A **
7196582-TTA-T 7328541-TTA-T **
7196602-C-T 7328561-C-T **
13402580-C-A 11246904-C-A **
7303157-C-T 7435116-C-T **
7357712-A-G 7489671-A-G **
7305024-C-A 7436983-C-A **
7311620-A-T 7443579-A-T **
7331071-C-A 7463030-C-A **
7349208-C-A 7481167-C-A **
7352059-C-A 7484018-C-A **
59015673-C-A 56869526-C-A **
8855450-C-A 8987409-C-A **
9030196-C-A 9192587-C-A **
9057171-A-G 9219562-A-G **
10841950-A-G **
10933073-C-A **
10924788-C-A **
10919226-C-T **
10904742-G-T **
2857812-G-T 2989771-G-T **
2902283-T-G 3034242-T-G **
2981163-G-T 3113122-G-T **
3011187-C-A 3143146-C-A **
10888678-C-A **
28595655-T-G 26449508-T-G CTS12495 **
28595664-C-T 26449517-C-T CTS12496 **
10851085-TA-T **
10851083-T-AA **
10841968-C-G **
3032887-A-G 3164846-A-G **
13143790-CACATCACTCT-C 10633276-CACATCACTCT-C **
10802606-C-T **
58982103-T-C 56835956-T-C **
3252987-C-A 3384946-C-A **
10754812-T-A **
10789719-C-A **
3252567-C-A 3384526-C-A **
10789862-C-A **
10807263-CA-C **
3046365-T-A 3178324-T-A **
10821873-A-T **
3250470-G-T 3382429-G-T **
10821923-A-ACTCC **
10821924-T-TC **
3195199-G-T 3327158-G-T **
10841949-C-A **
2818207-C-A 2950166-C-A **
2766870-A-G 2898829-A-G **
9069062-C-T 9231453-C-T **
10665128-A-C **
18951153-C-A 16839273-C-A **
11003749-A-G **
11015151-A-T **
13193988-C-A 11038312-C-A **
13216478-C-A 11060802-C-A **
13219011-A-T 11063335-A-T **
18982511-C-A 16870631-C-A **
11003741-T-C **
14213234-C-A 12092528-C-A **
13235125-C-A 11079449-C-A **
13239667-T-C 11083991-T-C **
15410565-T-C 13298685-T-C **
13291102-G-A 11135426-G-A **
13323452-T-C 11167776-T-C **
11003744-A-AGGCCT **
10992861-C-A **
2746686-T-C 2878645-T-C **
10974729-A-C **
10807250-C-A **
2695488-A-G 2827447-A-G **
2686536-G-A 2818495-G-A **
10807271-T-TA **
10941220-G-T **
10971240-C-A **
10974754-A-T **
23555905-C-A 21394019-C-A **
2681211-TA-T 2813170-TA-T **
10807282-G-T **
10974760-C-T **
10992701-C-A **
10974742-C-G **
16147889-A-AC 14036009-A-AC P8_Dst **
3287122-C-A 3419081-C-A **
3409521-TC-T 3541480-TC-T **
10744484-C-A **
9624621-C-A 9787012-C-A IR3_Prx **
3558505-C-A 3690464-C-A **
9990011-G-T 10152402-G-T **
3558528-C-A 3690487-C-A **
9926396-T-G 10088787-T-G **
9908802-A-T 10071193-A-T **
3562883-G-T 3694842-G-T **
9875007-C-A 10037398-C-A **
3564895-G-T 3696854-G-T **
9865209-C-A 10027600-C-A **
3648346-C-A 3780305-C-A **
9732833-T-G 9895224-T-G IR3_Prx **
9702856-C-T 9865247-C-T IR3_Prx **
9697173-T-C 9859564-T-C IR3_Prx **
9647516-C-A 9809907-C-A IR3_Prx **
9590559-T-TTG 9752950-T-TTG IR3_Prx **
17491633-C-A 15379753-C-A **
9590559-T-C 9752950-T-C IR3_Prx **
9453936-G-T 9616327-G-T **
9451368-T-G 9613759-T-G **
9437482-T-C 9599873-T-C **
9437079-C-G 9599470-C-G **
9421116-A-T 9583507-A-T **
9158859-T-C 9321250-T-C **
9158801-C-A 9321192-C-A **
3689884-C-G 3821843-C-G **
3743339-C-A 3875298-C-A **
3857005-A-C 3988964-A-C **
3863779-G-T 3995738-G-T **
9069070-A-G 9231461-A-G **
9069069-C-T 9231460-C-T **
13839918-A-G 11719212-A-G **
10033679-C-A 10196070-C-A **
10050780-G-A 10213171-G-A **
10668039-C-A **
10665138-CCACT-C **
10668018-C-A **
10668021-T-C **
10668035-A-T **
3437057-G-T 3569016-G-T **
14515195-G-T 12403400-G-T PR1486 ****
10668044-A-C **
10665136-C-CTGTGT **
10668055-G-A **
10668058-G-T **
10669141-G-T **
10673904-A-T **
10673919-A-T **
10678281-T-C **
10678283-A-T **
3457328-C-A 3589287-C-A **
6457947-A-G 6589906-A-G **
10659533-A-G **
10665114-A-C **
10659547-C-T **
10665068-T-C **
10665076-T-A **
10665077-TTCTTTCC-T **
10665136-C-T **
10665085-ACTCCTTT-A **
3522459-A-G 3654418-A-G **
10665116-C-T **
10807242-C-A **
10665121-C-T **
10665131-C-T **
22027918-C-A 19866032-C-A ***
21888531-C-A 19726645-C-A ***
21862890-C-A 19701004-C-A ***
21836108-T-C 19674222-T-C ***
21795437-T-G 19633551-T-G ***
58977842-C-T 56831695-C-T ***
22079554-C-A 19917668-C-A ***
59004623-GGAAA-C 56858476-GGAAA-C 16×GAAA***
16648115-GTT-G 14536235-GTT-G 29×T***
9972040-C-T 10134431-C-T ***
13471875-T-A 11316199-T-A ***
28813293-T-G 26667146-T-G ***
28747482-C-A 26601335-C-A ***
13652106-C-T 11496430-C-T ***
13704468-C-G 11548792-C-G ***
7137277-GCA-G 7269236-GCA-G ***
13455475-A-ATCCAG 11299799-A-ATCCAG ***
13143779-C-T 10633265-C-T ***
13459211-CAACTGACTCA-C 11303535-CAACTGACTCA-C ***
9972041-T-C 10134432-T-C ***
28786006-A-T 26639859-A-T ***
28785714-A-ATGGAG 26639567-A-ATGGAG ***
16108662-A-T 13996782-A-T P8_Prx ***
28103949-CT-C 25957802-CT-C P1_Y2 22×T***
10020883-G-C 10183274-G-C ***
10037245-A-AG 10199636-A-AG ***
10037246-G-T 10199637-G-T ***
25734047-G-GT 23587900-G-GT P1_b3 11×T***
27719940-G-A 25573793-G-A P1_Y2 ***
13850260-A-C 11729554-A-C ***
28777118-C-A 26630971-C-A ***
56742726-G-T ***
26334850-A-AC 24188703-A-AC P1_Y1 ***
13855598-A-C 11734892-A-C ***
18423-G-A ***
13680898-A-C 11525222-A-C ***
13140295-T-G 10629781-T-G ***
13869439-G-A 11748733-G-A ***
5471990-G-A 5603949-G-A ***
5471991-A-G 5603950-A-G ***
5471992-G-A 5603951-G-A ***
56834508-C-A,T ***
56834492-C-A ***
13704463-G-C 11548787-G-C ***
13802920-A-C 11682214-A-C ***
56831653-C-CTCCATCCCAT,CTCCATTCCGC ***
56830541-GCTGAA-ATTGAA,G ***
13823171-A-T 11702465-A-T ***
16117482-AT-A 14005602-AT-A P8_Prx 10×T***
5472008-G-A 5603967-G-A ***
5472010-G-A 5603969-G-A ***
13823163-GCATCC-G 11702457-GCATCC-G ***
13823170-T-A 11702464-T-A ***
13869249-G-T 11748543-G-T ***
22490660-G-T 20328774-G-T DYZ19 ***
22490692-C-G 20328806-C-G DYZ19 ***
16519316-CAAAA-C 14407436-CAAAA-C 15×A***
6792019-T-TA 6923978-T-TA 11×A***
23644586-C-A 21482700-C-A ***
13839861-G-A 11719155-G-A ***
25101631-T-C 22955484-T-C g1 ***
26526565-T-TG 24380418-T-TG P1_Y1 ***
23436681-G-T 21274795-G-T ***
13680925-A-C,G 11525249-A-C,G ***
18596061-AACAC-A 16484181-AACAC-A 16×AC***
21838971-G-GAA 19677085-G-GAA 20×A***
18806044-C-CT 16694164-C-CT 19×T***
16247966-A-C 14136086-A-C ***
13812822-G-C 11692116-G-C ***
16406853-ATTTTT-A 14294973-ATTTTT-A 20×T***
13857490-G-A 11736784-G-A ***
14548297-C-A 12436498-C-A ***
22913216-AT-A 20751330-AT-A 8×T***
13476830-A-C,G 11321154-A-C,G ******
22880893-CTCCACA-C 20719007-CTCCACA-C ***
20951194-AT-A,ATT 18789308-AT-A,ATT P4_Dst 19×T***
22825730-C-A 20663844-C-A ***
13479029-C-A,G 11323353-C-A,G ***
13819949-C-G 11699243-C-G ***
23766907-C-A 21605021-C-A ***
13452841-C-T 11297165-C-T ***
7651844-C-CTG 7783803-C-CTG ***
13869144-GGAAAA-G,GGAAAC 11748438-GGAAAA-G,GGAAAC ***
13856380-C-A,T 11735674-C-A,T ***
17196747-GGTAG-G,GGT 15084867-GGTAG-G,GGT ***
24892888-C-T 22746741-C-T g1 ***
7651734-T-G 7783693-T-G ***
7651738-C-G 7783697-C-G ***
13865754-C-G,T 11745048-C-G,T ***
24490447-G-A 22344300-G-A ***
13453610-T-C 11297934-T-C ***
7651845-A-T 7783804-A-T ***
13462671-G-A 11306995-G-A ***
24355639-C-CGCAGAT 22209492-C-CGCAGAT ***
24096078-C-T 21949931-C-T P3_b1 ***
23976556-A-G 21830409-A-G ***
9985415-A-G 10147806-A-G ***
9985771-A-T 10148162-A-T ***
13294450-A-G 11138774-A-G ***
13447093-A-T 11291417-A-T ***
13454791-C-T 11299115-C-T ***
23876353-T-C 21714467-T-C ***
13455700-G-A 11300024-G-A ***
21676194-CACAAT-C 19514308-CACAAT-C ***
6960661-T-C 7092620-T-C ***
10807305-G-T ***
15475449-C-T 13363569-C-T ***
14710502-C-A 12598569-C-A ***
14712132-C-A 12600199-C-A ***
14761588-A-T 12649657-A-T ***
14765676-A-ATT 12653745-A-ATT 21×T***
14826059-C-A 12714126-C-A ***
14993807-C-A 12881892-C-A ***
10020174-C-A 10182565-C-A ***
9981495-T-A 10143886-T-A ***
9954371-C-A 10116762-C-A ***
15208256-C-A 13096342-C-A ***
9891877-A-C 10054268-A-C ***
13228501-CTTTTTTT-C ***
15352161-G-A 13240280-G-A ***
9848730-TCCATG-T 10011121-TCCATG-T ***
15564135-T-C 13452255-T-C ***
10754748-T-G ***
8695816-C-T 8827775-C-T ***
8648172-GATAT-G 8780131-GATAT-G 14×AT***
16018735-C-A 13906855-C-A ***
15956866-CTTTT-C 13844986-CTTTT-C 15×T***
15931226-A-G 13819346-A-G ***
15901197-A-G 13789317-A-G ***
15852169-C-A 13740289-C-A ***
8710845-C-A 8842804-C-A ***
9115136-G-T 9277527-G-T ***
15689615-C-A 13577735-C-A ***
15623244-C-A 13511364-C-A ***
8751085-T-C 8883044-T-C ***
8772747-G-T 8904706-G-T ***
8853344-G-T 8985303-G-T ***
9103520-G-T 9265911-G-T ***
10682551-C-G ***
10754764-C-A,T ***
8528343-A-T 8660302-A-T ***
13704528-T-C 11548852-T-C ***
13855559-T-C 11734853-T-C ***
13855412-G-T 11734706-G-T ***
13847436-A-G 11726730-A-G ***
10935666-C-A ***
13801083-C-A 11680377-C-A ***
11668775-C-A ***
13689489-T-G 11533813-T-G ***
13896706-G-A 11776000-G-A ***
13678376-ATGGAC-A 11522700-ATGGAC-A ***
13634314-C-A 11478638-C-A ***
13483107-C-A 11327431-C-A ***
13226028-T-C 11070352-T-C ***
13471907-C-T 11316231-C-T ***
13453365-A-T 11297689-A-T ***
13868604-T-A 11747898-T-A ***
13935502-G-A 11814796-G-A ***
14462348-C-T 12341621-C-T ***
14313217-T-C 12192511-T-C ***
14457728-T-A 12337001-T-A ***
14405637-C-A 12284934-C-A ***
14380395-C-A 12259691-C-A ***
10828855-T-C ***
14322218-C-A 12201512-C-A ***
14313221-A-G 12192515-A-G ***
13680865-C-T 11525189-C-T ***
13988801-C-A 11868095-C-A ***
14176027-TCATAG-T 12055321-TCATAG-T ***
14116869-C-A 11996163-C-A ***
10889785-C-CGTACA,T ***
14098640-C-A 11977934-C-A ***
14090024-A-T 11969318-A-T ***
10935589-T-TTCCAA ***
8600568-ACATCTGTCCTCTCCTAAAAT-A 8732527-ACATCTGTCCTCTCCTAAAAT-A ***
16228261-T-A 14116381-T-A ***
21612798-C-A 19450912-C-A ***
19119494-C-A 17007614-C-A ***
17763797-C-A 15651917-C-A ***
7053089-C-A 7185048-C-A ***
7000355-C-A 7132314-C-A ***
18124794-C-A 16012914-C-A ***
6779253-C-A 6911212-C-A ***
18249766-T-C 16137886-T-C ***
18266869-T-C 16154989-T-C ***
6668761-T-C 6800720-T-C ***
6652921-C-A 6784880-C-A ***
18406350-G-T 16294470-G-T P6_Gap ***
18550813-CCAGGCT-C 16438933-CCAGGCT-C ***
18637242-C-A 16525362-C-A ***
5927026-G-C 6058985-G-C ***
19040007-C-A 16928127-C-A ***
19126207-C-A 17014327-C-A ***
17580024-C-A 15468144-C-A ***
19476770-C-A 17364890-C-A ***
21562947-GTTTT-G,GTT 19401061-GTTTT-G,GTT 16×T***
2711954-C-A 2843913-C-A ***
2761936-C-A 2893895-C-A ***
3164076-A-T 3296035-A-T ***
19566080-C-A 17454200-C-A ***
3545011-A-G 3676970-A-G ***
19472472-C-A 17360592-C-A ***
5242472-G-A 5374431-G-A FGC44158 ***
3640528-TTTCT-T,TTTCC 3772487-TTTCT-T,TTTCC ***
4063043-C-A 4195002-C-A ***
4687878-A-G 4819837-A-G ***
4951136-C-A 5083095-C-A ***
19295458-C-A 17183578-C-A ***
19226601-C-A 17114721-C-A ***
17661555-C-A 15549675-C-A ***
17369122-T-C 15257242-T-C ***
16246062-G-T 14134182-G-T ***
8357727-C-A 8489686-C-A ***
16489451-A-G 14377571-A-G ***
8199225-C-A 8331184-C-A ***
8209481-C-A 8341440-C-A FGC46639 ***
8212024-C-A 8343983-C-A ***
8218246-C-A 8350205-C-A ***
8218253-C-A 8350212-C-A ***
16344564-C-A 14232684-C-A ***
16550080-C-A 14438200-C-A ***
16319590-C-A 14207710-C-A ***
16316627-A-G 14204747-A-G ***
8385743-C-A 8517702-C-A ***
8434616-C-A 8566575-C-A ***
16290147-G-A 14178267-G-A ***
8470846-T-A 8602805-T-A ***
8122496-C-A 8254455-C-A ***
16621439-G-T 14509559-G-T ***
7386082-C-A 7518041-C-A ***
7642831-C-A 7774790-C-A ***
17238410-G-T 15126530-G-T ***
7613065-C-A 7745024-C-A ***
7627885-C-A 7759844-C-A ***
17133853-C-A 15021973-C-A ***
17133001-C-A 15021121-C-A ***
7633687-C-A 7765646-C-A ***
7674380-C-A 7806339-C-A ***
16679628-C-A 14567748-C-A ***
7683412-C-A 7815371-C-A ***
7705190-C-A 7837149-C-A ***
7709025-T-C 7840984-T-C ***
7804097-C-A 7936056-C-A ***
16822324-C-A 14710444-C-A ***
16786213-CTTTTTTTT-C,CTTTTT 14674333-CTTTTTTTT-C,CTTTTT 22×T***
13658913-C-A 11503237-C-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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