Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF41/S524 > Z43690 > S775 > L746 > S781 > BY11989 > A922

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
RDNDZ
22708397-T-C 20546511-T-C FGC74574 YY+
13262017-C-T 11106341-C-T +
3822962-GATATATATATATAT-G 3954921-GATATATATATATAT-G 26×AT+
22243361-T-C 20081475-T-C FGC74573 DYZ19 +
21524444-G-A 19362558-G-A FGC74572 Y+
58838545-G-C 56752326-C-G +
3588094-GTATATATA-G 3720053-GTATATATA-G 24×TA+
3600535-C-T 3732494-C-T FGC74569 +
16724402-G-A 14612522-G-A M2889 Y+
59016773-C-T 56870626-C-T +
17319971-GAGAAAGAA-G 15208091-GAGAAAGAA-G 13×AGAA+
59013228-C-G 56867081-C-G +
59013179-G-T 56867032-G-T +
5821838-G-T 5953797-G-T FGC74570 +
14930083-C-G 12818148-C-G FGC74571 YY+
13277778-T-A 11122102-T-A *
6089796-A-T 6221755-A-T *
13449060-TTCCACTGCACTTCACTCCACTGCAC-T 11293384-TTCCACTGCACTTCACTCCACTGCAC-T *
13498288-C-T 11342612-C-T *
5299344-A-C 5431303-A-C *
28796394-T-G 26650247-T-G *
3970482-G-GA 4102441-G-GA 12×A*
13734436-G-A 11578760-G-A *
13709209-T-A 11553533-T-A *
13690064-C-G 11534388-C-G *
13636850-T-TA 11481174-T-TA 10×A*
13593090-C-T 11437414-C-T *
13489740-C-T 11334064-C-T *
13342523-A-T 11186847-A-T *
13513666-G-T 11357990-G-T *
28805917-G-A 26659770-G-A *
13710343-G-A 11554667-G-A *
59027301-AAAAAC-A,AAAAAGC 56881154-AAAAAC-A,AAAAAGC 4×AAAAC*
13474356-T-A 11318680-T-A *
13474354-G-C 11318678-G-C *
13269599-A-C 11113923-A-C *
13196396-A-C 11040720-A-C *
5664338-A-G 5796297-A-G *
5664336-C-T 5796295-C-T *
5663688-T-C 5795647-T-C *
15018653-G-C 12906742-G-C YY*
13718583-A-T 11562907-A-T *
13748537-G-T 11592861-G-T *
13498392-A-T 11342716-A-T *
13458650-C-G 11302974-C-G *
13407141-C-CT 11251465-C-CT 13×T*
13195931-A-G 11040255-A-G *
13196378-G-A 11040702-G-A *
22508738-G-A 20346852-G-A DYZ19 *
13734427-G-C 11578751-G-C *
13196401-T-C 11040725-T-C *
3259035-CAAA-C 3390994-CAAA-C 22×A*
13194227-T-C 11038551-T-C *
13194850-C-T 11039174-C-T *
28539174-CAAA-C 26393027-CAAA-C 20×A*
13195379-C-G 11039703-C-G *
4878246-C-CA 5010205-C-CA 18×A*
13196284-C-T 11040608-C-T *
3446607-C-CA 3578566-C-CA 25×A*
6091720-ATTT-A 6223679-ATTT-A 28×T*
58833835-T-C 56757036-A-G *
4807249-TA-T 4939208-TA-T 23×A*
5987232-C-CT 6119191-C-CT 12×T*
5354713-C-CATAT 5486672-C-CATAT 16×AT*
2934095-AT-A 3066054-AT-A 15×T*
22509198-G-A 20347312-G-A DYZ19 *
58905084-T-C 56685787-A-G *
22508948-G-T 20347062-G-T DYZ19 *
4982523-AT-A 5114482-AT-A 23×T*
5388088-C-CA 5520047-C-CA 13×A*
13688984-T-A 11533308-T-A *
23041198-GAA-G 20879312-GAA-G 34×A*
6839614-A-G 6971573-A-G YY*
4803315-CT-C 4935274-CT-C 13×T*
6402042-A-C 6534001-A-C *
6408535-G-A 6540494-G-A FGC69283 *
5480908-CT-C 5612867-CT-C 16×T*
58979156-C-G 56833009-C-G *
7341946-A-G 7473905-A-G Y*
13196408-A-T 11040732-A-T 5×CCATT*
17802166-TA-T 15690286-TA-T 30×A*
9789275-CGTGTGT-C,CGT 9951666-CGTGTGT-C,CGT 22×GT*
4020761-TA-T 4152720-TA-T 12×A*
13697125-G-C 11541449-G-C *
4151936-C-CA 4283895-C-CA 17×A*
13726305-G-T 11570629-G-T *
5155953-TA-T 5287912-TA-T 13×A*
23488834-TA-T 21326948-TA-T 30×A*
17663118-C-CAA 15551238-C-CAA 26×A*
28553992-CA-C 26407845-CA-C 28×A*
16692117-C-CAA 14580237-C-CAA 28×A*
13474500-A-G 11318824-A-G *
13637178-T-C 11481502-T-C *
58979172-C-T 56833025-C-T *
13688951-G-A 11533275-G-A *
13723132-G-T 11567456-G-T *
13722810-T-G 11567134-T-G *
13721146-G-A 11565470-G-A *
13721100-C-G 11565424-C-G *
13709852-C-G 11554176-C-G *
13709109-C-A,T 11553433-C-A,T *
13689005-C-G 11533329-C-G *
13637233-C-A 11481557-C-A *
13858760-C-T 11738054-C-T *
13637213-C-T 11481537-C-T *
13637207-G-T 11481531-G-T *
13521695-G-T 11366019-G-T *
13497534-A-T 11341858-A-T *
13469034-G-T 11313358-G-T *
13464951-A-T 11309275-A-T *
13464201-T-C 11308525-T-C *
13461123-T-A 11305447-T-A *
13734440-T-C 11578764-T-C *
13954127-A-AAATAAT,AAATAATAAT 11833421-A-AAATAAT,AAATAATAAT 12×AAT*
13450674-G-C 11294998-G-C *
28805375-G-A 26659228-G-A *
59030478-AAAAC-A,AAAACAAAC 56884331-AAAAC-A,AAAACAAAC 6×AAAC*
59026918-T-C 56880771-T-C *
59014168-C-A,T 56868021-C-A,T *
58981131-G-C 56834984-G-C *
58978094-A-G 56831947-A-G *
28816873-G-C 26670726-G-C *
28812839-A-C 26666692-A-C *
28461722-CT-C,CTT 26315575-CT-C,CTT 19×T*
15340383-C-CT,CTT 18×T*
27506515-CA-C 25360368-CA-C P1_Y2 24×A*
26010309-T-TAC 23864162-T-TAC P1_Y1 *
22510490-G-T 20348604-G-T DYZ19 *
22230892-G-A 20069006-G-A DYZ19 *
22230885-C-T 20068999-C-T DYZ19 *
22230870-A-T 20068984-A-T DYZ19 *
19309422-CATAT-C,CAT 17197542-CATAT-C,CAT 19×AT*
17841328-GACAC-G,GAC 15729448-GACAC-G,GAC 22×AC*
13450685-C-G 11295009-C-G *
13448203-T-TCCATC,TCCATTCCATC 11292527-T-TCCATC,TCCATTCCATC *
13194281-T-A 11038605-T-A *
3062024-C-CA 3193983-C-CA 13×A*
4837552-A-C 4969511-A-C *
22441551-G-C 20279665-G-C BY26527 DYZ19 *
4583025-G-GTT 4714984-G-GTT 27×T*
4485715-CTGTG-C,CTG 4617674-CTGTG-C,CTG 16×TG*
4378776-T-G 4510735-T-G *
3822982-T-G 3954941-T-G *
3615472-GA-G 3747431-GA-G 14×A*
4773481-CT-C 4905440-CT-C 25×T*
5135238-C-T 5267197-C-T 26×T*
59003044-C-A 56856897-C-A *
13734450-T-C 11578774-T-C *
13711883-G-A 11556207-G-A *
13637182-G-T 11481506-G-T *
22487083-C-G 20325197-C-G DYZ19 *
13378255-A-G 11222579-A-G *
13194970-T-C 11039294-T-C *
13194956-T-C 11039280-T-C *
4964729-ATT-A 5096688-ATT-A 34×T*
5223608-TA-T 5355567-TA-T 12×A*
13445530-A-G 11289854-A-G *
9984067-T-C 10146458-T-C Y*
13420907-C-T 11265231-C-T *
13378169-G-A 11222493-G-A *
13346088-A-AG 11190412-A-AG 8×AG*
13253309-C-T 11097633-C-T *
13239513-C-CT 11083837-C-CT 17×T*
13196316-C-A 11040640-C-A *
13194849-C-T 11039173-C-T *
8288815-TA-T,TAA 8420774-TA-T,TAA 23×A*
5354749-C-T 5486708-C-T 9×AT*
7534406-G-GT,GTT 7666365-G-GT,GTT 19×T*
7534382-G-T 7666341-G-T YY9×T*
6447774-G-GT 6579733-G-GT 16×T*
6402359-T-A 6534318-T-A *
5945467-C-CTT 6077426-C-CTT 25×T*
5663480-C-T 5795439-C-T *
5659707-GTATA-G 5791666-GTATA-G 28×TA*
5434018-A-G 5565977-A-G *
3521303-A-AT 3653262-A-AT 14×T*
59031840-G-A 56885693-G-A *
13697048-T-A 11541372-T-A *
5661100-A-G 5793059-A-G *
13326180-C-G 11170504-C-G *
13388195-A-T 11232519-A-T *
13415306-C-T 11259630-C-T *
13494545-C-T 11338869-C-T *
13502851-C-T 11347175-C-T *
13521343-A-T 11365667-A-T *
13570214-A-T 11414538-A-T *
13640775-T-TG 11485099-T-TG *
22509279-G-C 20347393-G-C FGC73124 DYZ19 *
59003021-G-A 56856874-G-A *
59003090-G-A 56856943-G-A *
59031246-C-A 56885099-C-A *
5366585-G-A 5498544-G-A *
5366640-T-G 5498599-T-G *
5661132-C-T 5793091-C-T *
13308570-G-A 11152894-G-A *
5667405-C-T 5799364-C-T *
5667760-G-C 5799719-G-C *
13263872-G-A 11108196-G-A *
13263903-A-C 11108227-A-C *
13265535-G-T 11109859-G-T *
13286013-G-A 11130337-G-A *
13293104-G-C 11137428-G-C *
13398353-C-A 11242677-C-A *
13398354-C-A 11242678-C-A *
13433435-G-A 11277759-G-A *
13712521-T-C 11556845-T-C *
17158968-C-CTT 15047088-C-CTT 26×T*
22255654-T-G 20093768-T-G DYZ19 *
22509920-C-A 20348034-C-A DYZ19 *
13324143-G-T 11168467-G-T *
13308567-C-T 11152891-C-T *
59010417-A-G 56864270-A-G *
5661897-G-T 5793856-G-T *
13502822-A-T 11347146-A-T *
13696960-G-C 11541284-G-C *
3257945-C-G 3389904-C-G *
3257985-A-C 3389944-A-C *
3258676-A-G 3390635-A-G *
3293192-G-A 3425151-G-A *
24343465-T-G 22197318-T-G P3_t1 *
3474980-A-C 3606939-A-C *
3573284-T-G 3705243-T-G *
3573338-G-A 3705297-G-A *
4379306-A-G 4511265-A-G *
4416201-A-T 4548160-A-T *
4417098-G-C 4549057-G-C *
5366840-T-C 5498799-T-C *
5664050-A-T 5796009-A-T *
13277762-G-T 11122086-G-T *
13246235-G-A 11090559-G-A *
13263883-A-G 11108207-A-G *
19189430-C-CT 17077550-C-CT 35×T*
28802898-A-G 26656751-A-G *
13260372-T-A 11104696-T-A *
3253829-CA-C 3385788-CA-C 18×A*
13254498-C-T 11098822-C-T *
13242337-C-T 11086661-C-T *
5664482-A-G 5796441-A-G *
6598964-G-A 6730923-G-A *
6580116-T-C 6712075-T-C FGC69274 *
6414897-T-C 6546856-T-C *
6402301-A-C 6534260-A-C *
5675536-A-T 5807495-A-T *
5664514-C-A 5796473-C-A *
28796467-C-G 26650320-C-G *
13403594-C-T 11247918-C-T *
3649831-C-T 3781790-C-T *
59029089-C-T 56882942-C-T *
59028919-C-A 56882772-C-A *
5581941-AT-A 5713900-AT-A 12×T*
3115734-G-GA 3247693-G-GA 14×A*
59029701-A-T 56883554-A-T *
59030008-A-T 56883861-A-T *
13720850-A-G 11565174-A-G *
3404731-G-GA 3536690-G-GA 11×A*
13868786-G-A 11748080-G-A *
26344249-CAA-C 24198102-CAA-C P1_Y1 14×A*
3812718-C-CA 3944677-C-CA 17×A*
3039839-CT-C 3171798-CT-C 22×T*
9994930-G-A 10157321-G-A Y*
22424794-A-G 20262908-A-G DYZ19 *
58986706-C-T 56840559-C-T *
2888870-CAA-C 3020829-CAA-C 32×A*
17086602-C-CATAT 14974722-C-CATAT 22×AT*
9984160-C-G 10146551-C-G Y*
21450481-C-A 19288595-C-A **
13458295-A-C 11302619-A-C **
13459325-C-T 11303649-C-T **
21450507-A-C 19288621-A-C **
21212943-A-C 19051057-A-C **
13459339-T-G 11303663-T-G **
21213055-C-T 19051169-C-T **
21523634-G-T 19361748-G-T **
20723532-G-T 18561646-G-T P4_Prx **
20433261-T-G 18271375-T-G P5_Dst **
20252778-G-C 18090892-G-C P5_Dst **
20105551-G-T 17993671-G-T P5_Dst **
19812518-A-T 17700638-A-T P5_Prx **
19709723-A-T 17597843-A-T P5_Prx **
19611315-A-C 17499435-A-C P5_Prx **
13488340-G-A 11332664-G-A **
19604523-G-C 17492643-G-C P5_Prx **
19436732-G-A 17324852-G-A **
19436712-G-A 17324832-G-A **
21475022-C-A 19313136-C-A **
27906394-G-T 25760247-G-T P1_Y2 **
58865670-C-T 56725201-G-A **
9591181-G-A 9753572-G-A IR3_Prx **
7084450-T-G 7216409-T-G **
7264622-A-T 7396581-A-T **
7441607-C-T 7573566-C-T **
58865900-G-T 56724971-C-A **
22361016-T-C 20199130-T-C DYZ19 **
58856377-G-A 56734494-C-T **
27856803-G-T 25710656-G-T P1_Y2 **
8692388-G-A 8824347-G-A **
9310817-G-T 9473208-G-T **
9349857-G-T 9512248-G-T **
9414468-T-A 9576859-T-A **
9430341-C-A 9592732-C-A **
9638773-C-T 9801164-C-T IR3_Prx **
21536437-C-A 19374551-C-A **
9949252-G-C 10111643-G-C **
9971503-G-C 10133894-G-C **
22212022-G-A 20050136-G-A **
22016932-A-T 19855046-A-T **
58912872-C-A 56677999-G-T **
21944777-C-A 19782891-C-A **
21913662-T-G 19751776-T-G **
21681505-A-C 19519619-A-C **
21634998-T-C 19473112-T-C **
21575108-T-G 19413222-T-G **
13458288-C-T 11302612-C-T **
13424454-T-C 11268778-T-C **
13654423-G-T 11498747-G-T **
19018013-A-G 16906133-A-G **
13655510-G-T 11499834-G-T **
17624669-T-A 15512789-T-A **
22226636-A-C 20064750-A-C ZS5238 DYZ19 **
15146975-A-C 13035062-A-C **
15189403-C-G 13077489-C-G **
22360974-G-C 20199088-G-C DYZ19 **
17757209-C-A 15645329-C-A **
15377888-G-A 13266008-G-A **
15444720-A-C 13332840-A-C **
17733736-G-T 15621856-G-T **
17726468-A-C 15614588-A-C **
15646976-T-G 13535096-T-G **
17726207-A-G 15614327-A-G **
15962888-T-G 13851008-T-G **
14682948-T-A 12571014-T-A **
15963346-G-C 13851466-G-C **
17618491-A-C 15506611-A-C **
16319542-A-C 14207662-A-C **
16319585-A-T 14207705-A-T **
16379780-A-C 14267900-A-C **
17616911-A-C 15505031-A-C **
16725854-A-C 14613974-A-C **
16725858-G-A 14613978-G-A **
16725885-A-C 14614005-A-C **
17023527-T-A 14911647-T-A **
17065016-G-A 14953136-G-A **
17220475-C-T 15108595-C-T **
14740131-T-G 12628199-T-G **
14682945-G-A 12571011-G-A **
13655514-C-A 11499838-C-A **
18403267-A-G 16291387-A-G P6_Gap **
59000030-A-T 56853883-A-T **
19042168-T-A 16930288-T-A **
19042154-G-A 16930274-G-A **
7058399-T-G 7190358-T-G **
19014238-C-T 16902358-C-T **
19000977-A-T 16889097-A-T **
18902291-A-G 16790411-A-G **
18819099-C-T 16707219-C-T **
18797200-T-C 16685320-T-C **
18526183-C-T 16414303-C-T P6_Dst **
18409078-G-T 16297198-G-T P6_Gap **
13747457-G-T 11591781-G-T **
18228597-C-G 16116717-C-G **
14565144-A-C 12453344-A-C **
18143716-A-C 16031836-A-C **
18124155-T-G 16012275-T-G **
18014722-C-T 15902842-C-T P7_Dst **
17994501-C-A 15882621-C-A P7_Prx **
17855362-C-A 15743482-C-A **
17849696-T-C 15737816-T-C **
13981421-T-G 11860715-T-G **
13981749-A-G 11861043-A-G **
14112170-T-C 11991464-T-C **
14122816-G-A 12002110-G-A **
14123147-T-C 12002441-T-C **
14259732-G-A 12139026-G-A **
7058401-A-C 7190360-A-C **
17322928-G-A 15211048-G-A **
7008045-A-C 7140004-A-C **
2769133-C-T 2901092-C-T **
24126355-A-G 21980208-A-G P3_b1 **
24101923-T-C 21955776-T-C P3_b1 **
59025339-A-T 56879192-A-T **
24101890-A-T 21955743-A-T P3_b1 **
24096495-C-A 21950348-C-A P3_b1 **
23569602-A-G 21407716-A-G **
26132991-T-G 23986844-T-G P1_Y1 **
58866372-G-A 56724499-C-T **
2678509-G-A 2810468-G-A FGC10429 **
27966830-T-A 25820683-T-A P1_Y2 **
58974896-C-A 56828749-C-A **
23521262-T-G 21359376-T-G **
3237462-T-G 3369421-T-G **
3460080-A-T 3592039-A-T **
3462049-G-T 3594008-G-T **
26263633-G-A 24117486-G-A P1_Y1 **
28033401-G-A 25887254-G-A P1_Y2 **
26314362-A-C 24168215-A-C P1_Y1 **
26314371-T-A 24168224-T-A P1_Y1 **
13518961-G-A 11363285-G-A **
24387597-T-C 22241450-T-C **
6984603-G-A 7116562-G-A **
13518946-T-A 11363270-T-A **
58827089-C-A 56763782-G-T **
17265219-G-A 15153339-G-A **
59025397-T-A 56879250-T-A **
22361525-T-G 20199639-T-G DYZ19 **
25241010-G-A 23094863-G-A P2_r1 **
22361512-G-A 20199626-G-A DYZ19 **
22361484-G-A 20199598-G-A DYZ19 **
25161388-A-T 23015241-A-T g1 **
25160503-T-G 23014356-T-G g1 **
25138297-C-A 22992150-C-A g1 **
25106044-G-A 22959897-G-A g1 **
24141638-T-G 21995491-T-G P3_b1 **
25497984-G-A 23351837-G-A P2_r2 **
25688962-T-G 23542815-T-G P1_b3 **
25732511-A-C 23586364-A-C P1_b3 **
13261085-G-A 11105409-G-A **
24625353-T-A 22479206-T-A P3_t2 **
25732523-A-C 23586376-A-C P1_b3 **
24294130-C-A 22147983-C-A P3_t1 **
24257759-T-A 22111612-T-A P3_b1 **
24166203-G-T 22020056-G-T P3_b1 **
3811446-T-C 3943405-T-C **
58881619-T-C 56709252-A-G **
25270181-T-A 23124034-T-A P2_r1 **
58839198-T-G 56751673-A-C **
5115218-A-G 5247177-A-G **
16344936-A-C 14233056-A-C **
26874627-A-G 24728480-A-G P1_r3 **
26981912-G-T 24835765-G-T P1_r4 **
28004876-C-G 25858729-C-G P1_Y2 **
5241049-C-T 5373008-C-T **
27189874-C-T 25043727-C-T P1_g3 **
5289043-T-C 5421002-T-C **
27225748-A-C 25079601-A-C P1_g3 **
17324133-A-G 15212253-A-G **
22841439-A-C 20679553-A-C **
59018652-C-T 56872505-C-T **
27384555-T-C 25238408-T-C P1_g3 **
22495957-G-T 20334071-G-T DYZ19 **
27527569-C-T 25381422-C-T P1_Y2 **
58881606-C-A 56709265-G-T **
58881607-C-G 56709264-G-C **
6008799-T-G 6140758-T-G **
58865869-A-T 56725002-T-A **
22488560-T-G 20326674-T-G DYZ19 **
26810718-T-C 24664571-T-C P1_g2 **
58827061-A-G 56763810-T-C **
4227137-A-C 4359096-A-C **
4288683-T-G 4420642-T-G **
3997290-A-G 4129249-A-G **
4431614-C-A 4563573-C-A **
3870474-A-T 4002433-A-T **
28004920-A-T 25858773-A-T P1_Y2 **
23447776-A-C 21285890-A-C **
4548294-T-G 4680253-T-G **
23016838-T-A 20854952-T-A **
26637477-G-C 24491330-G-C P1_g2 **
26637483-A-C 24491336-A-C P1_g2 **
4699307-G-C 4831266-G-C **
4735636-A-G 4867595-A-G **
58831501-C-T 56759370-G-A **
26637488-A-C 24491341-A-C P1_g2 **
22132571-G-T 19970685-G-T **
17431012-G-T 15319132-G-T ***
28478010-T-A 26331863-T-A ***
27815516-G-A 25669369-G-A P1_Y2 ***
17482312-A-G 15370432-A-G ***
6580103-A-C 6712062-A-C ***
17966193-A-G 15854313-A-G ***
13474780-A-G 11319104-A-G ***
13469318-G-C 11313642-G-C ***
17857848-T-C 15745968-T-C ***
17527378-G-A 15415498-G-A 8×TA***
26146751-G-A 24000604-G-A P1_Y1 ***
27189983-C-T 25043836-C-T P1_g3 ***
17726309-T-C 15614429-T-C ***
28474501-C-T 26328354-C-T ***
26454947-C-G 24308800-C-G P1_Y1 ***
19354285-T-C 17242405-T-C ***
28515431-A-C 26369284-A-C ***
22877148-G-T 20715262-G-T ***
21540851-G-A 19378965-G-A ***
23357210-A-G 21195324-A-G ***
21795385-C-G 19633499-C-G ***
58978092-C-A 56831945-C-A ***
22039890-G-T 19878004-G-T ***
58888833-T-A 56702038-A-T ***
58836792-G-A 56754079-C-T ***
22989143-G-A 20827257-G-A ***
13262030-G-T 11106354-G-T ***
58848007-T-C 56742864-A-G ***
58826999-C-G 56763872-G-C ***
22765739-G-A 20603853-G-A ***
22485472-G-C 20323586-G-C DYZ19 ***
22475607-C-G 20313721-C-G Z22231 DYZ19 ***
58848021-A-T 56742850-T-A ***
58872690-C-A 56718181-G-T ***
22475891-C-G 20314005-C-G DYZ19 ***
22366268-T-A 20204382-T-A DYZ19 ***
22357565-A-C 20195679-A-C DYZ19 ***
22357653-A-G 20195767-A-G DYZ19 ***
58978425-A-T 56832278-A-T ***
58979168-A-C 56833021-A-C ***
18136143-T-C 16024263-T-C ***
28805396-T-C 26659249-T-C ***
28784431-G-A 26638284-G-A ***
22315439-A-G 20153553-A-G DYZ19 ***
59019882-C-T 56873735-C-T ***
24941384-G-A 22795237-G-A g1 ***
19019869-T-G 16907989-T-G ***
19019875-T-A 16907995-T-A ***
19019882-A-C 16908002-A-C ***
19031329-C-T 16919449-C-T ***
13483437-C-T 11327761-C-T F18186 ***
58986865-T-A 56840718-T-A ***
58980756-A-C 56834609-A-C ***
58984544-A-G 56838397-A-G ***
58981146-C-A 56834999-C-A ***
22357635-G-T 20195749-G-T DYZ19 ***
19721380-C-T 17609500-C-T P5_Prx ***
13256791-A-C 11101115-A-C ***
20516305-C-A 18354419-C-A P5_Dst ***
58981142-A-C 56834995-A-C ***
22230881-T-C 20068995-T-C DYZ19 ***
21386509-G-T 19224623-G-T ***
58980835-C-T 56834688-C-T ***
58872730-C-G 56718141-G-C ***
13474735-A-T 11319059-A-T ***
17323101-A-G 15211221-A-G ***
13468508-T-G 11312832-T-G ***
13298592-C-T 11142916-C-T ***
13373932-G-A 11218256-G-A ***
13691947-C-T 11536271-C-T ***
13711874-A-C 11556198-A-C ***
13718605-C-T 11562929-C-T ***
13637399-C-T 11481723-C-T ***
22257524-G-C 20095638-G-C DYZ19 ***
13468500-G-A 11312824-G-A ***
4589798-T-G 4721757-T-G ***
22459722-C-A 20297836-C-A DYZ19 ***
22508556-G-C 20346670-G-C DYZ19 ***
22510813-A-G 20348927-A-G DYZ19 ***
9822742-T-G 9985133-T-G ***
28796408-C-T 26650261-C-T ***
6401998-G-A 6533957-G-A ***
13859364-G-C 11738658-G-C ***
13447114-T-C 11291438-T-C ***
58976868-A-C 56830721-A-C ***
13326172-T-G 11170496-T-G ***
59010319-G-T 56864172-G-T ***
58990783-A-C 56844636-A-C ***
17071126-T-A 14959246-T-A ***
18354233-A-G 16242353-A-G P6_Prx ***
13722909-A-C 11567233-A-C ***
19042179-C-A 16930299-C-A 17×A***
13204123-G-T 11048447-G-T ***
59022734-C-T 56876587-C-T ***
13194207-A-G 11038531-A-G ***
59015266-C-T 56869119-C-T ***
58990752-A-G 56844605-A-G ***
13196358-G-T 11040682-G-T ***
59031039-G-A 56884892-G-A ***
22487028-C-A 20325142-C-A DYZ19 ***
21107041-C-G 18945155-C-G ***
13474488-A-T 11318812-A-T ***
13362927-C-CTT 11207251-C-CTT 12×T***
28806059-T-A 26659912-T-A A4525 ***
9964319-C-T 10126710-C-T ***
13461052-A-C 11305376-A-C ***
13474342-C-T 11318666-C-T ***
13722703-G-A 11567027-G-A ***
3124050-G-A 3256009-G-A ***
13468489-T-A 11312813-T-A ***
13450320-A-T 11294644-A-T ***
13347726-A-C 11192050-A-C ***
13194555-C-T 11038879-C-T ***
4826445-C-T 4958404-C-T ***
7003106-G-T 7135065-G-T ***
22509244-T-G 20347358-T-G DYZ19 ***
13488170-C-A 11332494-C-A ***
13697233-G-A 11541557-G-A ***
13468463-C-T 11312787-C-T ***
28784422-A-G 26638275-A-G ***
13468457-G-A 11312781-G-A ***
13488169-G-A 11332493-G-A ***
13459285-C-A 11303609-C-A ***
13718269-T-A 11562593-T-A ***
58910511-A-G 56680360-T-C ***
58975807-G-A 56829660-G-A ***
22510363-G-A 20348477-G-A DYZ19 ***
22487085-A-C 20325199-A-C DYZ19 ***
58891094-C-T 56699777-G-A ***
3970985-CTT-C 4102944-CTT-C 17×T***
15622540-G-A 13510660-G-A ***
28818181-G-A 26672034-G-A ***
59024545-G-A 56878398-G-A ***
4378789-T-G 4510748-T-G ***
19367024-C-G 17255144-C-G ***
13719434-T-C 11563758-T-C ZS7842 ***
28802581-A-G 26656434-A-G ***
58984545-A-C 56838398-A-C ***
58984539-C-T 56838392-C-T ***
13869164-G-A 11748458-G-A ***
58836838-A-G 56754033-T-C ***
26379391-T-A 24233244-T-A P1_Y1 ***
13451044-T-C 11295368-T-C ***
58906788-T-C 56684083-A-G ***
28515436-A-C 26369289-A-C ***
22508049-C-G 20346163-C-G DYZ19 ***
22512048-A-T 20350162-A-T DYZ19 ***
7003021-C-A 7134980-C-A ***
21347035-T-A 19185149-T-A ***
13718874-C-A 11563198-C-A ***
4076256-C-A 4208215-C-A 21×A***
13486692-T-A 11331016-T-A ***
17245552-G-A 15133672-G-A ***
13694556-C-G 11538880-C-G ***
13723171-T-A 11567495-T-A ***
13273994-C-T 11118318-C-T ***
13273993-C-A 11118317-C-A ***
13468885-C-A 11313209-C-A Z37066 ***
13708683-T-A 11553007-T-A ***
13704934-C-G 11549258-C-G ***
13697497-G-A 11541821-G-A ***
13696640-A-C 11540964-A-C ***
13692486-A-C 11536810-A-C ***
13832091-A-C 11711385-A-C ***
13690197-C-G 11534521-C-G ***
3289275-A-G 3421234-A-G ***
13688725-G-C 11533049-G-C ***
13688713-C-A 11533037-C-A ***
13637524-T-A 11481848-T-A ***
13637424-C-G 11481748-C-G ***
13637255-G-A 11481579-G-A ***
13488366-C-T 11332690-C-T ***
28796468-C-A 26650321-C-A ***
13851988-A-G 11731282-A-G ***
13474778-T-A 11319102-T-A ***
15358591-T-G 13246710-T-G ***
16980159-G-A 14868279-G-A ***
16710070-T-A 14598190-T-A ***
16309305-G-A 14197425-G-A ***
15760385-A-G 13648505-A-G ***
15669873-T-G 13557993-T-G ***
15629557-C-A 13517677-C-A ***
15622534-G-T 13510654-G-T ***
15622527-G-A 13510647-G-A ***
14255904-G-A 12135198-G-A ***
13852011-C-T 11731305-C-T 11×GAATG***
58884112-C-A 56706759-G-T ***
13869175-G-C 11748469-G-C ***
13869173-T-A 11748467-T-A ***
13852048-A-G 11731342-A-G ***
13852043-A-C 11731337-A-C ***
13852042-G-A 11731336-G-A ***
13852035-T-A 11731329-T-A ***
13852021-G-T 11731315-G-T ***
13484226-A-G 11328550-A-G ***
4917601-CT-C 5049560-CT-C 16×T***
4548324-A-G 4680283-A-G ***
5996596-A-T 6128555-A-T ***
9984068-G-C 10146459-G-C ***
9984054-T-C 10146445-T-C ***
9822737-T-G 9985128-T-G ***
7966983-G-T 8098942-G-T ***
13261739-C-T 11106063-C-T ***
7503288-A-C 7635247-A-C IR1_L ***
7341954-G-T 7473913-G-T ***
13266445-G-T 11110769-G-T ***
13270797-A-G 11115121-A-G ***
13253125-T-G 11097449-T-G ***
5701184-C-T 5833143-C-T ***
5664525-G-A 5796484-G-A ***
5664523-C-T 5796482-C-T ***
13282244-T-G 11126568-T-G ***
13303431-A-C 11147755-A-C ***
5354771-C-T 5486730-C-T 11×AT***
5230701-A-C 5362660-A-C ***
13448821-T-G 11293145-T-G ***
13127068-C-T 10616554-C-T ***
13253308-T-A 11097632-T-A ***
13474512-C-A 11318836-C-A ***
13458652-A-T 11302976-A-T ***
4416473-A-T 4548432-A-T ***
13468048-T-C 11312372-T-C ***
13466583-T-C 11310907-T-C ***
13466577-G-A 11310901-G-A ***
13466522-A-G 11310846-A-G ***
13466503-C-G 11310827-C-G ***
13464986-C-T 11309310-C-T ***
13464190-T-C 11308514-T-C ***
13450289-C-T 11294613-C-T ***
13253320-A-C 11097644-A-C ***
13449892-T-A 11294216-T-A ***
13448708-C-T 11293032-C-T ***
13447319-C-G 11291643-C-G ***
5674390-C-T 5806349-C-T ***
5972747-G-C 6104706-G-C ***
13350765-T-C 11195089-T-C ***
13344988-A-G 11189312-A-G ***
13263625-G-T 11107949-G-T ***
4746512-C-A 4878471-C-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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