Swink
BigY2: 106932MDKA Birth: Germany
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 106932 |
---|---|---|---|---|---|---|---|---|
19929955-G-A | 17818075-G-A | FT12115 | P5_Prx | A* | ||||
28808603-T-C | 26662456-T-C | A* | ||||||
28817512-T-G | 26671365-T-G | A* | ||||||
22313308-A-G | 20151422-A-G | DYZ19 | A* | |||||
28817880-T-C | 26671733-T-C | A* | ||||||
14312904-C-G | 12192198-C-G | Y | Y | + | ||||
16946511-C-A | 14834631-C-A | Y | Y | + | ||||
22297932-G-A | 20136046-G-A | DYZ19 | * | |||||
8462082-A-AC | 8594041-A-AC | * | ||||||
13801295-A-C | 11680589-A-C | ** | ||||||
13697623-A-G | 11541947-A-G | ** | ||||||
13801263-G-C | 11680557-G-C | ** | ||||||
13801267-C-T | 11680561-C-T | A18600 | ** | |||||
13456151-C-T | 11300475-C-T | ** | ||||||
22252506-T-A | 20090620-T-A | BY48858 | DYZ19 | ** | ||||
3663374-C-T | 3795333-C-T | ** | ||||||
3663380-T-C | 3795339-T-C | FT318061 | ** | |||||
13801309-G-A | 11680603-G-A | ** | ||||||
6523684-CAT-C | 6655643-CAT-C | ** | ||||||
28747685-A-T | 26601538-A-T | ** | ||||||
20252821-G-A | 18090935-G-A | P5_Dst | ** | |||||
13460236-A-T | 11304560-A-T | ** | ||||||
17414907-TC-T | 15303027-TC-T | ** | ||||||
59018388-C-A | 56872241-C-A | ** | ||||||
18926872-CAA-C | 16814992-CAA-C | 17×A | ** | |||||
13697597-T-G | 11541921-T-G | FGC80613 | 5×GAATG | ** | ||||
17210920-C-A | 15099040-C-A | ** | ||||||
20326069-G-T | 18164183-G-T | P5_Dst | ** | |||||
22342540-A-G | 20180654-A-G | DYZ19 | ** | |||||
22252501-T-A | 20090615-T-A | DYZ19 | ** | |||||
22252480-C-T | 20090594-C-T | DYZ19 | ** | |||||
22252487-C-T | 20090601-C-T | DYZ19 | ** | |||||
22252503-C-A | 20090617-C-A | DYZ19 | ** | |||||
58984813-T-G | 56838666-T-G | ** | ||||||
58984804-A-G | 56838657-A-G | ** | ||||||
19668733-C-A | 17556853-C-A | P5_Prx | ** | |||||
7311500-A-C | 7443459-A-C | ** | ||||||
58973727-G-T | 56827580-G-T | ** | ||||||
22297884-G-A | 20135998-G-A | DYZ19 | ** | |||||
20937051-T-A | 18775165-T-A | P4_Dst | ** | |||||
11022033-C-T | ** | |||||||
10683366-C-A | ** | |||||||
10935637-A-T | ** | |||||||
11034872-T-C | ** | |||||||
10751036-T-C | ** | |||||||
10751055-G-A | FGC79642 | ** | ||||||
10761145-C-A | ** | |||||||
10831597-A-AC | ** | |||||||
10831602-TC-T | ** | |||||||
10956601-T-G | ** | |||||||
10844434-A-T | ** | |||||||
10921519-T-C | ** | |||||||
11034918-T-A | ** | |||||||
10977128-G-C | ** | |||||||
10992271-C-A | ** | |||||||
10994208-T-G | ** | |||||||
13254612-T-G | 11098936-T-G | ** | ||||||
10799632-T-TTAGAC | ** | |||||||
10799642-C-T | ** | |||||||
6836-A-C | ** | |||||||
6851-T-G | ** | |||||||
6130244-G-T | 6262203-G-T | ** | ||||||
10956582-T-TC | ** | |||||||
10956605-A-G | ** | |||||||
10956619-C-G | ** | |||||||
10657255-A-C | FT428316 | ** | ||||||
10669456-T-C | ** | |||||||
10791291-C-A | ** | |||||||
10791293-C-T | ** | |||||||
10791307-T-A | ** | |||||||
10791308-C-T | ** | |||||||
10791313-C-T | ** | |||||||
10791326-C-G | ** | |||||||
10791329-C-T | ** | |||||||
10900023-T-C | ** | |||||||
10868990-C-T | ** | |||||||
10895801-C-T | ** | |||||||
10763059-T-A | ** | |||||||
10763068-C-T | ** | |||||||
10770630-T-C | BY29331 | ** | ||||||
10992287-A-AT | ** | |||||||
10895808-TTCC-T | ** | |||||||
10846949-C-A | ** | |||||||
19668824-G-T | 17556944-G-T | P5_Prx | ** | |||||
10693748-C-G | ** | |||||||
10693749-CTTTCC-A | ** | |||||||
11036084-A-G | ** | |||||||
10988879-C-G | ** | |||||||
10988884-G-C | ** | |||||||
11034878-G-C | ** | |||||||
11034893-C-A | ** | |||||||
11034902-G-A | ** | |||||||
11034903-T-C | ** | |||||||
11034909-G-A | ** | |||||||
11034915-C-G | ** | |||||||
11034955-T-C | ** | |||||||
10884757-C-T | ** | |||||||
11025109-A-T | ** | |||||||
11025112-C-G | ** | |||||||
10995801-T-G | ** | |||||||
20603885-G-A | 18441999-G-A | P5_Dst | ** | |||||
10673553-A-T | ** | |||||||
10673567-C-T | ** | |||||||
10673576-C-G | ** | |||||||
10748217-T-C | ** | |||||||
11000431-T-TATGAAACC | ** | |||||||
11000456-T-C | ** | |||||||
10750271-G-T | ** | |||||||
10750273-C-T | FT199998 | ** | ||||||
10973800-G-T | ** | |||||||
10988849-C-A | ** | |||||||
10988867-T-C | ** | |||||||
10988869-C-G | ** | |||||||
10926720-T-C | ** | |||||||
10761165-C-T | ** | |||||||
21253983-C-A | 19092097-C-A | ** | ||||||
10792261-T-C | ** | |||||||
10845736-T-C | ** | |||||||
16692752-G-T | 14580872-G-T | ** | ||||||
14495756-C-A | 12383953-C-A | ** | ||||||
10895802-A-T | ** | |||||||
11036072-T-C | ** | |||||||
56750092-A-C | ** | |||||||
10895833-T-C | ** | |||||||
10845738-T-A | ** | |||||||
15424786-G-T | 13312906-G-T | ** | ||||||
10849723-T-C | ** | |||||||
10849763-C-A | FT434030 | ** | ||||||
10849766-G-T | ** | |||||||
10912837-C-T | ** | |||||||
10992286-C-A | ** | |||||||
10992332-T-A | ** | |||||||
10992261-C-A | ** | |||||||
13466379-G-T | 11310703-G-T | ** | ||||||
17030673-C-A | 14918793-C-A | ** | ||||||
10763073-C-T | ** | |||||||
10685466-C-A | ** | |||||||
28496348-C-CA | 26350201-C-CA | 18×A | ** | |||||
8736864-C-A | 8868823-C-A | ** | ||||||
7165306-GTT-G | 7297265-GTT-G | 20×T | ** | |||||
16590873-CAAA-C | 14478993-CAAA-C | 17×A | ** | |||||
10769415-C-T | ** | |||||||
10672624-C-A | ** | |||||||
10934928-C-A | ** | |||||||
10895807-G-C | ** | |||||||
10895841-CA-C | ** | |||||||
10940873-A-C | ** | |||||||
10762983-C-T | ** | |||||||
10947664-T-C | ** | |||||||
10985124-C-CATT | ** | |||||||
28793049-T-A | 26646902-T-A | ** | ||||||
7140513-C-A | 7272472-C-A | ** | ||||||
10946714-AATTCC-A | ** | |||||||
15127845-A-T | 13015932-A-T | ** | ||||||
10799547-T-C | ** | |||||||
11000425-T-A | ** | |||||||
10947684-C-A | ** | |||||||
14300786-C-A | 12180080-C-A | ** | ||||||
13712572-AG-A | 11556896-AG-A | ** | ||||||
10758027-T-C | ** | |||||||
10898345-C-T | ** | |||||||
13726429-G-A | 11570753-G-A | ** | ||||||
13726433-T-C | 11570757-T-C | ** | ||||||
10760470-T-A | ** | |||||||
10760471-A-T | ** | |||||||
10760482-G-C | ** | |||||||
10760484-A-C | ** | |||||||
10760487-C-A | ** | |||||||
10821954-T-C | ** | |||||||
10840776-C-A | ** | |||||||
10842944-G-C | ** | |||||||
7197570-ATTT-A | 7329529-ATTT-A | 19×T | ** | |||||
10873340-G-T | ** | |||||||
9702981-C-A | 9865372-C-A | IR3_Prx | ** | |||||
10940856-A-C | ** | |||||||
10898278-A-C | ** | |||||||
10898285-T-G | ** | |||||||
10898291-T-A | ** | |||||||
10898292-G-C | ** | |||||||
10898293-C-A | ** | |||||||
10898314-A-ACTTCG | ** | |||||||
10898340-C-G | ** | |||||||
10898350-T-TTCTTC | ** | |||||||
10898357-C-G | ** | |||||||
10754954-T-C | ** | |||||||
10657425-CA-C | ** | |||||||
8333620-TCTC-T | 8465579-TCTC-T | ** | ||||||
10808063-C-A | ** | |||||||
10977068-C-G | ** | |||||||
10977135-T-A | ** | |||||||
10977138-C-G | ** | |||||||
10912847-G-C | ** | |||||||
10992321-A-C | ** | |||||||
6085404-C-A | 6217363-C-A | ** | ||||||
10653123-C-CATTCAAATCG | ** | |||||||
10986591-G-T | ** | |||||||
10849752-C-T | ** | |||||||
56838168-G-T | ** | |||||||
19668831-G-T | 17556951-G-T | P5_Prx | ** | |||||
10751054-C-T | ** | |||||||
9799132-G-T | 9961523-G-T | ** | ||||||
10865827-C-T | ** | |||||||
10865811-TCCAGA-T | ** | |||||||
19668818-C-A | 17556938-C-A | P5_Prx | ** | |||||
10947674-T-G | ** | |||||||
27808662-T-G | 25662515-T-G | P1_Y2 | ** | |||||
10808082-C-G | ** | |||||||
10940901-C-T | ** | |||||||
7080095-A-C | 7212054-A-C | ** | ||||||
14404896-C-A | 12284193-C-A | ** | ||||||
10865813-C-A | ** | |||||||
10865835-C-T | ** | |||||||
10865847-C-T | ** | |||||||
22881412-C-A | 20719526-C-A | FTA3842 | ** | |||||
7717740-CTTT-C | 7849699-CTTT-C | ** | ||||||
7717744-CT-C | 7849703-CT-C | ** | ||||||
14397718-T-G | 12277014-T-G | ** | ||||||
18378986-T-G | 16267106-T-G | P6_Prx | ** | |||||
15449892-CTTTTT-C | 13338012-CTTTTT-C | 21×T | ** | |||||
10760434-C-A | ** | |||||||
10767214-AT-A | BY14605 | ** | ||||||
6756908-CAA-C | 6888867-CAA-C | 26×A | ** | |||||
16092604-C-A | 13980724-C-A | ** | ||||||
10912824-G-T | ** | |||||||
10934915-C-T | ** | |||||||
10934927-C-A | ** | |||||||
10846897-T-C | ** | |||||||
10866084-C-CT | ** | |||||||
10792269-C-T | ** | |||||||
24637483-TG-T | 22491336-TG-T | P3_t2 | ** | |||||
10761206-C-A | ** | |||||||
10912882-C-A | ** | |||||||
13475627-A-T | 11319951-A-T | ** | ||||||
10921500-C-T | ** | |||||||
13466355-A-T | 11310679-A-T | ** | ||||||
13466356-G-A | 11310680-G-A | ** | ||||||
10760446-A-G | ** | |||||||
10898263-T-C | ** | |||||||
10751046-T-C | ** | |||||||
10684224-C-A | ** | |||||||
10808068-G-C | ** | |||||||
10808071-A-C | ** | |||||||
28797116-C-A | 26650969-C-A | ** | ||||||
10651628-G-T | ** | |||||||
10926700-T-A | ** | |||||||
11022101-C-T | ** | |||||||
11022124-TC-T | ** | |||||||
10929747-A-C | ** | |||||||
10992260-C-A | ** | |||||||
10895814-TCC-T | ** | |||||||
56843663-A-C | ** | |||||||
4302337-C-A | 4434296-C-A | ** | ||||||
10808045-C-A | ** | |||||||
21234989-A-G | 19073103-A-G | ** | ||||||
10665807-C-G | ** | |||||||
10665819-A-G | ** | |||||||
10665833-A-C | ** | |||||||
21939738-A-C | 19777852-A-C | ** | ||||||
10921538-T-G | ** | |||||||
27862619-G-T | 25716472-G-T | P1_Y2 | ** | |||||
10921503-ATCCAT-A | ** | |||||||
16298369-C-A | 14186489-C-A | ** | ||||||
6424818-C-A | 6556777-C-A | ** | ||||||
11038202-C-G | ** | |||||||
10792270-T-C | ** | |||||||
10792294-C-T | ** | |||||||
28332502-G-T | 26186355-G-T | P1_b4 | ** | |||||
28815163-G-T | 26669016-G-T | ** | ||||||
27570957-G-T | 25424810-G-T | P1_Y2 | ** | |||||
5828960-CACACAA-C | 5960919-CACACAA-C | ** | ||||||
17512529-T-G | 15400649-T-G | ** | ||||||
13466353-A-T | 11310677-A-T | ** | ||||||
11017636-A-T | ** | |||||||
10990723-C-A | ** | |||||||
56742767-G-T | ** | |||||||
17117359-C-A | 15005479-C-A | ** | ||||||
10873320-C-T | ** | |||||||
10986577-T-A | ** | |||||||
10866976-ACACTC-A | ** | |||||||
4630803-G-T | 4762762-G-T | ** | ||||||
10677550-T-G | ** | |||||||
10940880-G-A | ** | |||||||
20500942-GAAAA-G | 18339056-GAAAA-G | P5_Dst | 15×A | ** | ||||
16243092-C-A | 14131212-C-A | ** | ||||||
13866154-C-G | 11745448-C-G | ** | ||||||
13935633-C-A | 11814927-C-A | ** | ||||||
11024418-C-T | ** | |||||||
10669441-T-C | ** | |||||||
10865782-G-C | ** | |||||||
10770638-C-G | ** | |||||||
56843675-G-T | ** | |||||||
10912785-T-G | ** | |||||||
10912793-G-A | ** | |||||||
10912794-C-T | ** | |||||||
10912851-G-T | ** | |||||||
10912867-A-C | ** | |||||||
10912899-G-A | ** | |||||||
10849712-C-A | ** | |||||||
13453339-C-A | 11297663-C-A | ** | ||||||
10988736-G-T | ** | |||||||
14356300-C-A | 12235595-C-A | ** | ||||||
10873365-T-C | ** | |||||||
13705418-C-A | 11549742-C-A | ** | ||||||
10954306-C-A | ** | |||||||
22281787-T-A | 20119901-T-A | DYZ19 | ** | |||||
21447899-C-A | 19286013-C-A | ** | ||||||
14289481-G-T | 12168775-G-T | ** | ||||||
10760349-G-T | ** | |||||||
10665820-A-G | ** | |||||||
10665830-G-A | ** | |||||||
10940870-A-C | FT437472 | ** | ||||||
56827588-T-A | ** | |||||||
9110372-C-A | ** | |||||||
10760444-C-T | ** | |||||||
10782240-C-A | ** | |||||||
10961596-C-A | ** | |||||||
10965209-G-T | ** | |||||||
6992593-C-A | 7124552-C-A | ** | ||||||
19043730-A-C | 16931850-A-C | ** | ||||||
25521872-T-G | 23375725-T-G | P1_gr1 | ** | |||||
13326284-C-A | 11170608-C-A | ** | ||||||
25955978-GT-G | 23809831-GT-G | P1_Y1 | ** | |||||
24445427-C-A | 22299280-C-A | Y112866 | ** | |||||
19992570-A-C | 17880690-A-C | P5_Prx | 9×T | ** | ||||
19079116-C-A | 16967236-C-A | ** | ||||||
18270997-C-A | 16159117-C-A | ** | ||||||
10684211-T-C | ** | |||||||
16422370-C-A | 14310490-C-A | ** | ||||||
10789333-TC-T | ** | |||||||
10866079-T-A | ** | |||||||
11013958-C-T | ** | |||||||
13856184-T-A | 11735478-T-A | ** | ||||||
10799512-T-C | ** | |||||||
13705483-A-C | 11549807-A-C | ** | ||||||
10665793-C-G | ** | |||||||
10665812-A-C | ** | |||||||
6267388-T-G | 6399347-T-G | IR3_Dst | ** | |||||
10661661-T-C | ** | |||||||
13929271-C-A | 11808565-C-A | ** | ||||||
15209300-C-A | 13097386-C-A | ** | ||||||
9548980-A-AGTGT | 9711371-A-AGTGT | IR3_Prx | ** | |||||
7430551-C-A | 7562510-C-A | ** | ||||||
9962127-C-A | 10124518-C-A | ** | ||||||
3697149-G-T | 3829108-G-T | ** | ||||||
18628053-C-A | 16516173-C-A | ** | ||||||
10846970-A-T | ** | |||||||
14561249-C-A | 12449450-C-A | ** | ||||||
28432112-CGT-C | 26285965-CGT-C | P1_gr2 | ** | |||||
10990710-A-C | ** | |||||||
2665506-C-A | 2797465-C-A | ** | ||||||
2669985-C-A | 2801944-C-A | ** | ||||||
2708153-C-A | 2840112-C-A | ** | ||||||
2928461-C-A | 3060420-C-A | ** | ||||||
3133156-C-A | 3265115-C-A | ** | ||||||
3274230-A-C | 3406189-A-C | ** | ||||||
3561461-C-T | 3693420-C-T | ** | ||||||
3727835-C-A | 3859794-C-A | ** | ||||||
4408797-C-T | 4540756-C-T | ** | ||||||
4450468-CT-C | 4582427-CT-C | 9×T | ** | |||||
4509428-C-A | 4641387-C-A | ** | ||||||
4921380-G-T | 5053339-G-T | ** | ||||||
5011277-T-G | 5143236-T-G | ** | ||||||
5059663-T-G | 5191622-T-G | ** | ||||||
5226103-G-T | 5358062-G-T | ** | ||||||
5281479-C-A | 5413438-C-A | ** | ||||||
5483404-G-T | 5615363-G-T | ** | ||||||
6050857-G-T | 6182816-G-T | ** | ||||||
6983809-C-A | 7115768-C-A | ** | ||||||
6996669-T-C | 7128628-T-C | ** | ||||||
7013587-C-A | 7145546-C-A | Y83143 | ** | |||||
7015349-A-T | 7147308-A-T | ** | ||||||
7157093-G-T | 7289052-G-T | ** | ||||||
7162966-A-G | 7294925-A-G | ** | ||||||
7164067-C-T | 7296026-C-T | ** | ||||||
7428174-C-A | 7560133-C-A | ** | ||||||
8178898-C-A | 8310857-C-A | ** | ||||||
8674131-C-A | 8806090-C-A | ** | ||||||
8698993-G-T | 8830952-G-T | ** | ||||||
9034578-C-G | 9196969-C-G | ** | ||||||
9040170-TG-T | 9202561-TG-T | ** | ||||||
9116917-A-C | 9279308-A-C | ** | ||||||
9414482-G-T | 9576873-G-T | ** | ||||||
9629246-C-TGTGTGT | 9791637-C-TGTGTGT | IR3_Prx | ** | |||||
9629260-G-C | 9791651-G-C | IR3_Prx | ** | |||||
9629262-G-T | 9791653-G-T | IR3_Prx | ** | |||||
9629270-A-G | 9791661-A-G | IR3_Prx | ** | |||||
9629275-A-T | 9791666-A-T | IR3_Prx | ** | |||||
10661650-A-T | ** | |||||||
10665824-A-G | FT428605 | ** | ||||||
10678624-A-T | ** | |||||||
10689366-T-G | ** | |||||||
10690319-C-A | ** | |||||||
10692475-C-A | ** | |||||||
10693336-C-A | ** | |||||||
10744429-C-A | ** | |||||||
10744490-ATT-A | ** | |||||||
10758036-A-T | ** | |||||||
10758047-T-C | ** | |||||||
10759961-AC-A | ** | |||||||
10760485-C-A | ** | |||||||
10760497-T-G | ** | |||||||
10761490-C-T | FT430048 | ** | ||||||
10790515-T-G | ** | |||||||
10798276-C-A | ** | |||||||
10821920-TC-T | ** | |||||||
10821924-TTCCATTCCA-T | ** | |||||||
10824960-T-A | ** | |||||||
10842980-C-A | ** | |||||||
10846899-A-T | ** | |||||||
10846958-C-T | ** | |||||||
10846962-C-G | ** | |||||||
10862842-C-A | ** | |||||||
10866042-C-CGTTCA | ** | |||||||
10866051-C-G | ** | |||||||
10866086-C-CATTT | ** | |||||||
10866089-T-TTCCTC | ** | |||||||
10866101-C-A | ** | |||||||
10866142-C-A | ** | |||||||
10873343-C-T | FT294388 | ** | ||||||
10873347-T-G | ** | |||||||
10873349-A-G | ** | |||||||
10874425-T-G | ** | |||||||
10874426-C-T | ** | |||||||
10874432-C-T | ** | |||||||
10875729-T-TCAACC | ** | |||||||
10883907-CATTCCATTCCATTCCATTCCATTAA-C | ** | |||||||
10889745-C-A | ** | |||||||
10896118-A-T | ** | |||||||
10921103-TTCCATTCCACTCCAC-T | ** | |||||||
10921503-A-G | ** | |||||||
10935647-C-T | FT437215 | ** | ||||||
10940843-T-C | ** | |||||||
10940841-CATTGT-C | ** | |||||||
10940864-T-A | ** | |||||||
10947865-CCACTCCTCTG-C | ** | |||||||
10949117-ATGC-A | ** | |||||||
10949429-A-G | ** | |||||||
10950921-C-T | ** | |||||||
10958173-C-A | ** | |||||||
10963642-TC-T | ** | |||||||
10971197-A-T | ** | |||||||
10973810-G-T | ** | |||||||
10983955-CAT-C | ** | |||||||
10990727-G-T | ** | |||||||
10994834-C-A | ** | |||||||
11013967-C-T | ** | |||||||
11017641-T-A | ** | |||||||
11019896-C-A | ** | |||||||
13217818-CAAGGGGGAAAT-C | 11062142-CAAGGGGGAAAT-C | ** | ||||||
13223647-G-A | 11067971-G-A | ** | ||||||
13255212-T-G | 11099536-T-G | ** | ||||||
13456076-T-C | 11300400-T-C | ** | ||||||
13457696-C-A | 11302020-C-A | ** | ||||||
13506900-C-A | 11351224-C-A | ** | ||||||
13597162-C-A | 11441486-C-A | ** | ||||||
13645017-T-A | 11489341-T-A | ** | ||||||
13697608-GA-G | 11541932-GA-G | ** | ||||||
13709533-T-A | 11553857-T-A | ** | ||||||
11644816-T-C | ** | |||||||
11644825-A-G | ** | |||||||
11644827-G-A | FT351517 | ** | ||||||
11665290-C-A | ** | |||||||
13846740-G-T | 11726034-G-T | ** | ||||||
14089823-A-C | 11969117-A-C | ** | ||||||
14251681-C-A | 12130975-C-A | ** | ||||||
14270066-G-T | 12149360-G-T | ** | ||||||
14446696-C-A | 12325969-C-A | ** | ||||||
14701402-C-A | 12589468-C-A | ** | ||||||
14721784-T-C | 12609852-T-C | ** | ||||||
15066424-C-A | 12954515-C-A | ** | ||||||
15107621-G-T | 12995708-G-T | ** | ||||||
15317464-T-A | 13205570-T-A | ** | ||||||
15622663-C-A | 13510783-C-A | ** | ||||||
15756428-C-A | 13644548-C-A | ** | ||||||
15932299-C-G | 13820419-C-G | ** | ||||||
16084334-A-C | 13972454-A-C | ** | ||||||
16115635-G-A | 14003755-G-A | P8_Prx | ** | |||||
16450414-C-A | 14338534-C-A | ** | ||||||
16450421-T-G | 14338541-T-G | ** | ||||||
16865176-G-A | 14753296-G-A | FTB29121 | ** | |||||
16931516-C-A | 14819636-C-A | ** | ||||||
16987788-C-A | 14875908-C-A | ** | ||||||
17146484-C-A | 15034604-C-A | ** | ||||||
17634639-A-C | 15522759-A-C | ** | ||||||
17839742-C-A | 15727862-C-A | ** | ||||||
17865395-T-A | 15753515-T-A | ** | ||||||
17918795-C-A | 15806915-C-A | ** | ||||||
18086249-A-C | 15974369-A-C | ** | ||||||
18297878-T-TG | 16185998-T-TG | P6_Prx | ** | |||||
18344527-ATTT-A | 16232647-ATTT-A | P6_Prx | ** | |||||
18487924-G-GAC | 16376044-G-GAC | P6_Dst | ** | |||||
18846863-C-A | 16734983-C-A | ** | ||||||
18867335-ATGTC-A | 16755455-ATGTC-A | ** | ||||||
18950618-C-A | 16838738-C-A | ** | ||||||
19043719-T-G | 16931839-T-G | ** | ||||||
19073796-C-A | 16961916-C-A | ** | ||||||
19459961-C-A | 17348081-C-A | ** | ||||||
19788666-A-T | 17676786-A-T | P5_Prx | ** | |||||
19788700-A-T | 17676820-A-T | P5_Prx | ** | |||||
19899110-T-G | 17787230-T-G | P5_Prx | ** | |||||
20045244-G-T | 17933364-G-T | P5_Prx | 7×AAAGA | ** | ||||
20458872-T-C | 18296986-T-C | P5_Dst | ** | |||||
20759801-C-A | 18597915-C-A | P4_Prx | ** | |||||
20793540-CACA-C | 18631654-CACA-C | P4_Prx | ** | |||||
21109871-A-C | 18947985-A-C | ** | ||||||
21221336-C-A | 19059450-C-A | ** | ||||||
21234977-A-G | 19073091-A-G | ** | ||||||
21234981-T-CAG | 19073095-T-CAG | ** | ||||||
21234984-G-A | 19073098-G-A | ** | ||||||
21234988-C-T | 19073102-C-T | ** | ||||||
21888028-T-G | 19726142-T-G | ** | ||||||
22316380-C-G | 20154494-C-G | DYZ19 | ** | |||||
23205006-A-T | 21043120-A-T | ** | ||||||
23825228-C-T | 21663342-C-T | ** | ||||||
24023653-CA-C | 21877506-CA-C | ** | ||||||
24445435-C-A | 22299288-C-A | ** | ||||||
26059268-T-G | 23913121-T-G | P1_Y1 | ** | |||||
26059313-T-G | 23913166-T-G | P1_Y1 | ** | |||||
26199647-A-T | 24053500-A-T | P1_Y1 | ** | |||||
26318422-A-C | 24172275-A-C | P1_Y1 | ** | |||||
26318425-A-C | 24172278-A-C | P1_Y1 | ** | |||||
27466765-G-T | 25320618-G-T | P1_Y2 | ** | |||||
28483049-AAAT-A | 26336902-AAAT-A | ** | ||||||
28610239-T-C | 26464092-T-C | ** | ||||||
28728320-T-C | 26582173-T-C | ** | ||||||
28728884-G-T | 26582737-G-T | ** | ||||||
28812343-G-A | 26666196-G-A | ** | ||||||
56831484-C-A | ** | |||||||
56843669-A-G | ** | |||||||
56844871-A-T | ** | |||||||
8901-A-G | ** | |||||||
27915-T-G | ** | |||||||
27930-C-A | ** | |||||||
13456147-G-T | 11300471-G-T | *** | ||||||
13850361-G-A | 11729655-G-A | Z16435 | BY43276 | *** | ||||
58974932-T-A | 56828785-T-A | *** | ||||||
15585186-G-GA | 13473306-G-GA | 10×A | *** | |||||
20826397-C-CT | 18664511-C-CT | P4_Gap | 17×T | *** | ||||
21873566-CAA-C | 19711680-CAA-C | 14×A | *** | |||||
19124920-CTT-C | 17013040-CTT-C | 15×T | *** | |||||
2950244-C-T | 3082203-C-T | FGC39197 | *** | |||||
8874970-C-CT | 9006929-C-CT | 17×T | *** | |||||
22115622-ATT-A | 19953736-ATT-A | 14×T | *** | |||||
8614794-C-CT | 8746753-C-CT | 10×T | *** | |||||
21194378-C-CT | 19032492-C-CT | 11×T | *** | |||||
10831558-T-C | *** | |||||||
56827866-TTCCAT-T,TTCCAG | *** | |||||||
11643767-T-A | BY89855 | *** | ||||||
7098863-CA-C | 7230822-CA-C | 10×A | *** | |||||
11643777-T-A | BY89858 | *** | ||||||
21425339-CTTTT-C | 19263453-CTTTT-C | 24×T | *** | |||||
10987836-T-C | *** | |||||||
13474753-C-A | 11319077-C-A | *** | ||||||
10673872-C-A | *** | |||||||
18592167-CAAAA-C | 16480287-CAAAA-C | 18×A | *** | |||||
10993054-C-T | *** | |||||||
56836128-C-CTCCAT | *** | |||||||
10682494-C-A | BY83683 | *** | ||||||
9798063-GT-G,GTT | 9960454-GT-G,GTT | 17×T | *** | |||||
10934857-C-T | *** | |||||||
13480393-C-G | 11324717-C-G | *** | ||||||
13480465-C-A | 11324789-C-A | *** | ||||||
13453174-C-A | 11297498-C-A | *** | ||||||
10794309-C-T | *** | |||||||
11643768-G-A | BY89856 | *** | ||||||
13513142-CA-C | 11357466-CA-C | *** | ||||||
10892568-C-T | *** | |||||||
10673869-A-T | BY83665 | *** | ||||||
21482762-CTTTTT-C | 19320876-CTTTTT-C | 19×T | *** | |||||
11643696-A-G | *** | |||||||
10667001-T-C | *** | |||||||
11643701-A-T | *** | |||||||
56832058-CACTCCACCCCACTCCA-C,CACTCCAC | *** | |||||||
2810366-ATTTT-A | 2942325-ATTTT-A | 23×T | *** | |||||
13487692-C-G | 11332016-C-G | *** | ||||||
10759957-T-C | *** | |||||||
19045010-TA-T,TAA | 16933130-TA-T,TAA | 16×A | *** | |||||
11643698-G-T | *** | |||||||
8760517-CTTTTT-C,CTTTT | 8892476-CTTTTT-C,CTTTT | 20×T | *** | |||||
10794305-A-G | *** | |||||||
21961720-GAA-G | 19799834-GAA-G | 12×A | *** | |||||
10926728-C-G | *** | |||||||
10892543-C-G | *** | |||||||
15993681-GTATA-G | 13881801-GTATA-G | 10×TA | *** | |||||
3271601-CT-C,CTT | 3403560-CT-C,CTT | 14×T | *** | |||||
10926694-A-AC | *** | |||||||
13473966-C-A | 11318290-C-A | *** | ||||||
56830311-G-C | *** | |||||||
21235227-CAAAAAAA-C | 19073341-CAAAAAAA-C | 19×A | *** | |||||
15341674-C-CT | 13229793-C-CT | 11×T | *** | |||||
21283519-C-A | 19121633-C-A | *** | ||||||
56834801-A-ACGCCACTCCT | *** | |||||||
7139295-C-A | 7271254-C-A | *** | ||||||
22298434-T-C | 20136548-T-C | BY37489 | DYZ19 | *** | ||||
5242428-C-G | 5374387-C-G | *** | ||||||
15059467-C-A | 12947559-C-A | *** | ||||||
10791027-T-A | *** | |||||||
14463291-CTT-C,CT | 12342564-CTT-C,CT | 16×T | *** | |||||
10801707-C-G | *** | |||||||
56836998-T-A | *** | |||||||
22068575-C-A | 19906689-C-A | *** | ||||||
2768179-G-T | 2900138-G-T | *** | ||||||
7009187-CTTTTT-C,CTT | 7141146-CTTTTT-C,CTT | 19×T | *** | |||||
7238342-C-A | 7370301-C-A | *** | ||||||
8290677-G-T | 8422636-G-T | *** | ||||||
8468065-CAAAAA-C,CAAA | 8600024-CAAAAA-C,CAAA | 24×A | *** | |||||
10892546-T-TAAATTA | *** | |||||||
10892548-CA-C | *** | |||||||
10892569-A-G | *** | |||||||
10986425-A-T | *** | |||||||
13839769-T-A | 11719063-T-A | *** | ||||||
13869130-G-C | 11748424-G-C | *** | ||||||
14253338-T-C | 12132632-T-C | *** | ||||||
17170167-CTT-C,CTTT | 15058287-CTT-C,CTTT | 21×T | *** | |||||
17914218-GTATATATA-G,GTATATA | 15802338-GTATATATA-G,GTATATA | 15×TA | *** | |||||
56841724-G-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.