Swink
BigY2: 320237MDKA Birth: Germany
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 320237 |
---|---|---|---|---|---|---|---|---|
13694961-G-A | 11539285-G-A | A* | ||||||
13695022-G-T | 11539346-G-T | A* | ||||||
22278542-T-A | 20116656-T-A | DYZ19 | A* | |||||
13691503-C-G | 11535827-C-G | BY88681 | + | |||||
19931620-CGA-C | 17819740-CGA-C | P5_Prx | 9×GA | ** | ||||
25880469-ATG-A | 23734322-ATG-A | P1_Y1 | 8×TG | ** | ||||
19436740-G-GAA | 17324860-G-GAA | ** | ||||||
7318490-T-TTTTA | 7450449-T-TTTTA | 11×TTTA | ** | |||||
14986650-CGG-C | 12874718-CGG-C | ** | ||||||
13472071-A-T | 11316395-A-T | ** | ||||||
28438218-AAG-A | 26292071-AAG-A | P1_gr2 | ** | |||||
14459934-C-A | 12339207-C-A | ** | ||||||
16932067-G-T | 14820187-G-T | ** | ||||||
13461108-A-T | 11305432-A-T | ** | ||||||
5191228-C-CTT | 5323187-C-CTT | 27×T | ** | |||||
16364058-CTA-C | 14252178-CTA-C | 27×TA | ** | |||||
16309251-T-TA | 14197371-T-TA | 19×A | ** | |||||
18039366-ATTTTTTTT-A | 15927486-ATTTTTTTT-A | 30×T | ** | |||||
16896539-C-CA | 14784659-C-CA | 17×A | ** | |||||
58979488-T-A | 56833341-T-A | ** | ||||||
14148014-AAAAT-A | 12027308-AAAAT-A | 8×AAAT | ** | |||||
22309944-G-T | 20148058-G-T | FT455634 | DYZ19 | ** | ||||
10887936-C-CTT | ** | |||||||
10988642-T-C | ** | |||||||
11019406-G-T | ** | |||||||
20579281-C-A | 18417395-C-A | P5_Dst | ** | |||||
13480467-T-A | 11324791-T-A | ** | ||||||
10744433-CAACTGCACTG-C | ** | |||||||
10744484-C-T | ** | |||||||
10744514-C-T | ** | |||||||
10794235-A-T | ** | |||||||
11022398-A-T | ** | |||||||
19324119-CA-C | 17212239-CA-C | 10×A | ** | |||||
10660972-C-T | ** | |||||||
10861863-T-C | ** | |||||||
10861871-A-T | ** | |||||||
10861890-CAGTCA-C | ** | |||||||
13718515-G-T | 11562839-G-T | ** | ||||||
10994346-T-C | ** | |||||||
10994350-ATTTC-A | ** | |||||||
10895803-TTCCGTTCCTCTC-T | ** | |||||||
10929977-A-T | ** | |||||||
14062010-CAA-C | 11941304-CAA-C | 34×A | ** | |||||
10838647-T-A | ** | |||||||
10838651-C-CTGAT | ** | |||||||
10838678-C-T | ** | |||||||
10838679-T-C | ** | |||||||
10838696-C-T | ** | |||||||
10868080-C-A | ** | |||||||
10943340-C-A | ** | |||||||
10994322-G-A | ** | |||||||
11021353-A-ACT | ** | |||||||
10949599-G-T | ** | |||||||
5059657-C-A | 5191616-C-A | ** | ||||||
5367839-G-T | 5499798-G-T | ** | ||||||
10825653-G-A | ** | |||||||
10875747-G-T | ** | |||||||
10875750-T-C | ** | |||||||
10875760-C-G | ** | |||||||
10875775-C-A | ** | |||||||
10875776-C-T | ** | |||||||
11033725-A-G | ** | |||||||
56850955-G-T | ** | |||||||
5935415-A-T | 6067374-A-T | ** | ||||||
7280952-CTTT-C | 7412911-CTTT-C | 26×T | ** | |||||
10885079-T-C | ** | |||||||
15374441-G-GTT | 13262561-G-GTT | 20×T | ** | |||||
24614178-C-CA | 22468031-C-CA | P3_t2 | 19×A | ** | ||||
10669390-A-G | ** | |||||||
10669391-T-C | ** | |||||||
10968786-A-T | ** | |||||||
10925496-C-CTCCAT | ** | |||||||
10763288-T-A | ** | |||||||
10763298-C-T | ** | |||||||
10763311-C-T | ** | |||||||
16980-A-T | ** | |||||||
11019443-C-T | ** | |||||||
18895707-G-GAA | 16783827-G-GAA | 12×A | ** | |||||
10906238-T-G | ** | |||||||
10989140-TC-T | ** | |||||||
14847004-CAAAA-C | 12735070-CAAAA-C | 20×A | ** | |||||
10924329-T-C | ** | |||||||
10859977-G-A | ** | |||||||
10669389-C-T | ** | |||||||
10685532-A-T | ** | |||||||
56849039-G-C | ** | |||||||
56849060-G-T | ** | |||||||
56849076-T-G | ** | |||||||
10836523-C-A | ** | |||||||
10929976-G-T | ** | |||||||
10929985-A-G | ** | |||||||
10930016-C-T | ** | |||||||
10930023-C-G | ** | |||||||
10930026-T-C | ** | |||||||
10930036-T-C | ** | |||||||
10930054-C-A | ** | |||||||
10749944-T-A | ** | |||||||
10749948-A-T | ** | |||||||
10749953-T-C | ** | |||||||
10885090-T-A | ** | |||||||
10885114-C-G | ** | |||||||
10885118-A-T | ** | |||||||
10885144-C-G | ** | |||||||
58883683-C-T | 56707188-G-A | ** | ||||||
10961378-C-T | ** | |||||||
13229769-C-A | 11074093-C-A | ** | ||||||
11007536-G-T | ** | |||||||
19162015-C-A | 17050135-C-A | ** | ||||||
8673884-C-A | 8805843-C-A | ** | ||||||
10852751-T-C | ** | |||||||
10906182-C-A | FT436129 | ** | ||||||
4902062-C-A | 5034021-C-A | ** | ||||||
10961370-C-G | ** | |||||||
10859973-T-C | ** | |||||||
20579265-C-A | 18417379-C-A | P5_Dst | ** | |||||
10845638-TTCC-T | ** | |||||||
10845668-TTCCA-T | ** | |||||||
10845674-TCCATTC-T | ** | |||||||
10924309-C-T | ** | |||||||
10924326-C-T | ** | |||||||
20376671-C-A | 18214785-C-A | P5_Dst | ** | |||||
10687519-G-T | FT429045 | ** | ||||||
10927866-C-T | ** | |||||||
13698516-T-C | 11542840-T-C | ** | ||||||
10751703-T-C | ** | |||||||
10824134-C-T | ** | |||||||
13987109-C-A | 11866403-C-A | ** | ||||||
19610283-C-A | 17498403-C-A | P5_Prx | ** | |||||
10759782-C-G | BY156133 | ** | ||||||
10759792-T-A | BY51911 | ** | ||||||
11033780-T-C | ** | |||||||
10802478-C-T | ** | |||||||
10952435-T-C | ** | |||||||
10952439-A-T | ** | |||||||
10952475-C-A | ** | |||||||
3116380-C-A | 3248339-C-A | ** | ||||||
10962671-G-T | ** | |||||||
26099756-A-T | 23953609-A-T | P1_Y1 | ** | |||||
10906196-A-G | ** | |||||||
10759742-T-C | ** | |||||||
10906171-G-C | ** | |||||||
10906181-C-T | ** | |||||||
10906189-T-A | ** | |||||||
10906204-G-C | ** | |||||||
10906233-G-C | ** | |||||||
11023080-G-T | ** | |||||||
14977296-CTTTT-C | 12865371-CTTTT-C | 15×T | ** | |||||
19847664-G-T | 17735784-G-T | P5_Prx | ** | |||||
13468241-A-T | 11312565-A-T | ** | ||||||
10777933-C-CTCCAT | ** | |||||||
10773413-C-A | ** | |||||||
10909744-T-C | ** | |||||||
13726258-T-A | 11570582-T-A | ** | ||||||
10852745-A-T | ** | |||||||
23848559-C-A | 21686673-C-A | ** | ||||||
10868048-C-G | ** | |||||||
10869018-C-A | ** | |||||||
10869028-C-G | ** | |||||||
23807576-C-A | 21645690-C-A | ** | ||||||
10868081-G-GTGAAC | ** | |||||||
10868087-TC-T | ** | |||||||
10787153-T-G | ** | |||||||
10836542-T-A | ** | |||||||
10836545-AT-A | ** | |||||||
19663425-G-T | 17551545-G-T | P5_Prx | ** | |||||
6830626-C-A | 6962585-C-A | ** | ||||||
4919273-G-T | 5051232-G-T | ** | ||||||
4805102-C-A | 4937061-C-A | ** | ||||||
25998835-AG-A | 23852688-AG-A | P1_Y1 | ** | |||||
10859969-T-G | ** | |||||||
10773417-C-A | ** | |||||||
10773434-C-A | ** | |||||||
9074091-C-A | 9236482-C-A | ** | ||||||
8160218-C-A | 8292177-C-A | ** | ||||||
4504905-C-A | 4636864-C-A | ** | ||||||
3079414-C-A | 3211373-C-A | ** | ||||||
11007540-C-T | ** | |||||||
56861714-C-G | ** | |||||||
24283331-C-A | 22137184-C-A | P3_t1 | ** | |||||
21212245-C-A | 19050359-C-A | ** | ||||||
11007525-C-T | FT393475 | ** | ||||||
19532442-C-A | 17420562-C-A | ** | ||||||
5185424-C-A | 5317383-C-A | ** | ||||||
23306520-C-A | 21144634-C-A | ** | ||||||
11033205-TTCCTG-T | ** | |||||||
16583279-G-A | 14471399-G-A | ** | ||||||
24601761-T-TC | 22455614-T-TC | P3_t2 | ** | |||||
13317861-C-A | 11162185-C-A | ** | ||||||
3275444-G-T | 3407403-G-T | ** | ||||||
10927881-T-C | ** | |||||||
10655071-T-C | ** | |||||||
20469715-CAAA-C | 18307829-CAAA-C | P5_Dst | ** | |||||
10860050-T-A | ** | |||||||
19847665-TA-T | 17735785-TA-T | P5_Prx | ** | |||||
22901917-C-A | 20740031-C-A | ** | ||||||
14549309-C-CAA | 12437510-C-CAA | 16×A | ** | |||||
17176054-G-T | 15064174-G-T | ** | ||||||
14504626-C-A | 12392831-C-A | ** | ||||||
23807574-G-T | 21645688-G-T | ** | ||||||
10868061-C-T | ** | |||||||
10868071-C-T | FT189924 | ** | ||||||
13269594-CAAAAA-C | 11113918-CAAAAA-C | ** | ||||||
10764589-C-CCATG | ** | |||||||
14042715-C-A | 11922009-C-A | ** | ||||||
10773397-A-AAAT | ** | |||||||
10773414-C-A | ** | |||||||
14077791-C-A | 11957085-C-A | ** | ||||||
7397620-C-A | 7529579-C-A | ** | ||||||
23825090-G-TTT | 21663204-G-TTT | ** | ||||||
28764940-C-A | 26618793-C-A | ** | ||||||
10884556-C-A | ** | |||||||
10663755-C-A | ** | |||||||
10868036-T-A | ** | |||||||
10797721-C-T | ** | |||||||
11643482-C-A | ** | |||||||
10754742-CTGCACTCCAT-C | ** | |||||||
20352301-C-A | 18190415-C-A | P5_Dst | ** | |||||
4002941-C-A | 4134900-C-A | ** | ||||||
11023086-T-C | ** | |||||||
10769739-G-C | FT430419 | ** | ||||||
10824158-A-T | ** | |||||||
15158611-GAAA-G | 13046697-GAAA-G | 15×A | ** | |||||
3721444-C-A | 3853403-C-A | ** | ||||||
7295770-A-C | 7427729-A-C | ** | ||||||
16992-T-C | ** | |||||||
10868012-T-G | ** | |||||||
10868017-T-C | ** | |||||||
10868030-C-CACTGAA | ** | |||||||
10671185-C-T | ** | |||||||
21946945-A-ATT | 19785059-A-ATT | 15×T | ** | |||||
10971137-T-G | ** | |||||||
4371153-C-A | 4503112-C-A | ** | ||||||
6861499-C-A | 6993458-C-A | ** | ||||||
10961408-C-T | ** | |||||||
10961393-C-T | ** | |||||||
7142222-C-A | 7274181-C-A | ** | ||||||
10839000-A-C | ** | |||||||
13472041-C-T | 11316365-C-T | ** | ||||||
14506734-A-C | 12394939-A-C | ** | ||||||
7643206-C-A | 7775165-C-A | ** | ||||||
10940260-A-C | FT437446 | ** | ||||||
13223393-A-C | 11067717-A-C | ** | ||||||
13223404-G-GAGCA | 11067728-G-GAGCA | ** | ||||||
28761235-T-G | 26615088-T-G | ** | ||||||
10673554-T-G | ** | |||||||
13858259-C-A | 11737553-C-A | ** | ||||||
13486780-C-A | 11331104-C-A | ** | ||||||
22325285-C-A | 20163399-C-A | DYZ19 | ** | |||||
10940282-T-A | ** | |||||||
10894567-A-AT | ** | |||||||
10955223-T-C | ** | |||||||
10907920-A-G | ** | |||||||
5242500-G-A | 5374459-G-A | ** | ||||||
16508657-C-A | 14396777-C-A | ** | ||||||
14280856-C-A | 12160150-C-A | ** | ||||||
11033210-G-T | ** | |||||||
8350629-C-A | 8482588-C-A | ** | ||||||
5293961-C-A | 5425920-C-A | ** | ||||||
19145444-C-A | 17033564-C-A | ** | ||||||
10860042-A-C | ** | |||||||
10814459-C-A | FT223128 | ** | ||||||
16945488-C-A | 14833608-C-A | ** | ||||||
56707214-G-T | ** | |||||||
14932017-C-A | 12820082-C-A | ** | ||||||
10809603-C-G | ** | |||||||
10809609-C-A | ** | |||||||
21905353-CG-C | 19743467-CG-C | ** | ||||||
10876738-T-C | ** | |||||||
14933527-C-A | 12821592-C-A | ** | ||||||
10898386-T-C | ** | |||||||
4902177-C-A | 5034136-C-A | ** | ||||||
16421135-C-A | 14309255-C-A | ** | ||||||
56858573-C-A | ** | |||||||
7043611-G-T | 7175570-G-T | ** | ||||||
10787307-T-G | ** | |||||||
2839971-C-A | 2971930-C-A | ** | ||||||
18880138-C-A | 16768258-C-A | ** | ||||||
19266732-C-A | 17154852-C-A | ** | ||||||
16956-GT-G | ** | |||||||
10962618-C-G | ** | |||||||
11031116-G-T | ** | |||||||
18343590-A-T | 16231710-A-T | P6_Prx | ** | |||||
19126393-C-A | 17014513-C-A | ** | ||||||
13486797-G-A | 11331121-G-A | ** | ||||||
11007528-C-A | ** | |||||||
8907664-C-A | 9039623-C-A | ** | ||||||
10824133-A-T | ** | |||||||
10658905-A-T | ** | |||||||
2979370-C-A | 3111329-C-A | ** | ||||||
10870309-C-A | ** | |||||||
10818630-T-C | ** | |||||||
10825656-C-G | ** | |||||||
16951-T-A | ** | |||||||
14505995-C-A | 12394200-C-A | ** | ||||||
7470108-C-A | 7602067-C-A | IR1_L | ** | |||||
28818096-G-T | 26671949-G-T | ** | ||||||
16964-A-G | ** | |||||||
28030819-C-T | 25884672-C-T | P1_Y2 | ** | |||||
14785501-CA-C | 12673571-CA-C | ** | ||||||
7315255-C-A | 7447214-C-A | ** | ||||||
10939077-A-ATTCTT | ** | |||||||
10939080-GTACCC-G | ** | |||||||
7044567-G-T | 7176526-G-T | ** | ||||||
16701463-C-A | 14589583-C-A | ** | ||||||
4889439-C-A | 5021398-C-A | ** | ||||||
21457753-G-T | 19295867-G-T | ** | ||||||
7646546-C-A | 7778505-C-A | ** | ||||||
8807626-C-A | 8939585-C-A | ** | ||||||
15430350-C-A | 13318470-C-A | ** | ||||||
14470554-C-A | 12349823-C-A | ** | ||||||
17372121-C-A | 15260241-C-A | ** | ||||||
2793094-C-A | 2925053-C-A | ** | ||||||
2845867-G-T | 2977826-G-T | ** | ||||||
2906666-C-A | 3038625-C-A | ** | ||||||
3177645-G-A | 3309604-G-A | ** | ||||||
3274318-C-A | 3406277-C-A | ** | ||||||
3274759-C-A | 3406718-C-A | ** | ||||||
3501059-C-A | 3633018-C-A | ** | ||||||
3606160-A-G | 3738119-A-G | ** | ||||||
3659061-T-C | 3791020-T-C | ** | ||||||
3679959-G-C | 3811918-G-C | ** | ||||||
3895656-G-T | 4027615-G-T | ** | ||||||
4009926-G-T | 4141885-G-T | ** | ||||||
4386393-T-C | 4518352-T-C | ** | ||||||
4580636-C-A | 4712595-C-A | ** | ||||||
4889429-C-A | 5021388-C-A | ** | ||||||
4918269-C-T | 5050228-C-T | ** | ||||||
4939815-C-A | 5071774-C-A | ** | ||||||
5221635-A-G | 5353594-A-G | ** | ||||||
5309994-C-A | 5441953-C-A | ** | ||||||
5322360-G-T | 5454319-G-T | ** | ||||||
5436160-A-T | 5568119-A-T | ** | ||||||
5603674-C-T | 5735633-C-T | ** | ||||||
5678743-G-T | 5810702-G-T | ** | ||||||
6054503-C-A | 6186462-C-A | ** | ||||||
6146410-A-G | 6278369-A-G | IR3_Dst | ** | |||||
6412918-G-T | 6544877-G-T | ** | ||||||
6490646-G-T | 6622605-G-T | ** | ||||||
6744565-C-A | 6876524-C-A | ** | ||||||
6752747-C-A | 6884706-C-A | ** | ||||||
7054343-C-A | 7186302-C-A | ** | ||||||
7103376-C-A | 7235335-C-A | ** | ||||||
7282549-C-A | 7414508-C-A | ** | ||||||
7379237-G-T | 7511196-G-T | ** | ||||||
7438019-C-A | 7569978-C-A | ** | ||||||
7829628-G-A | 7961587-G-A | Y130769 | ** | |||||
8080553-G-T | 8212512-G-T | ** | ||||||
8289450-G-A | 8421409-G-A | ** | ||||||
8575953-T-G | 8707912-T-G | ** | ||||||
9108413-C-A | ** | |||||||
9482273-C-A | 9644664-C-A | ** | ||||||
9500112-C-A | 9662503-C-A | ** | ||||||
9555342-G-T | 9717733-G-T | IR3_Prx | ** | |||||
9555353-C-A | 9717744-C-A | IR3_Prx | ** | |||||
9555370-C-A | 9717761-C-A | IR3_Prx | ** | |||||
9555376-C-A | 9717767-C-A | IR3_Prx | ** | |||||
9732991-G-T | 9895382-G-T | IR3_Prx | ** | |||||
9980515-C-A | 10142906-C-A | ** | ||||||
10655762-C-A | ** | |||||||
10658287-A-G | ** | |||||||
10664453-C-A | ** | |||||||
10664474-C-A | ** | |||||||
10666846-T-G | ** | |||||||
10671871-G-T | ** | |||||||
10757442-A-C | ** | |||||||
10770267-C-A | ** | |||||||
10779397-C-A | ** | |||||||
10794944-C-A | ** | |||||||
10796681-C-CGG | ** | |||||||
10796682-C-CTTT | ** | |||||||
10796688-A-AC | ** | |||||||
10796690-TC-T | ** | |||||||
10796706-C-T | ** | |||||||
10797715-TC-T | ** | |||||||
10797723-A-AT | ** | |||||||
10797888-T-C | ** | |||||||
10803598-G-T | ** | |||||||
10818617-A-T | ** | |||||||
10818632-A-T | ** | |||||||
10824182-CAT-C | ** | |||||||
10824186-CCAT-C | ** | |||||||
10825672-C-T | ** | |||||||
10828082-T-C | ** | |||||||
10839007-T-TTTGAG | ** | |||||||
10839012-T-A | ** | |||||||
10839060-C-A | ** | |||||||
10868000-C-G | ** | |||||||
10868115-A-T | ** | |||||||
10868117-T-C | ** | |||||||
10870000-T-A | ** | |||||||
10870642-C-A | ** | |||||||
10872003-C-A | ** | |||||||
10874185-C-A | FT434998 | ** | ||||||
10880597-C-A | ** | |||||||
10883842-C-A | ** | |||||||
10885345-C-A | ** | |||||||
10891986-CACA-C | ** | |||||||
10894564-TC-T | ** | |||||||
10894734-C-A | ** | |||||||
10900504-A-C | ** | |||||||
10901038-CCATTCCACTCCACCCCACTG-C | ** | |||||||
10909710-C-T | ** | |||||||
10927860-AG-A | ** | |||||||
10927886-T-AACCACTCTAC | ** | |||||||
10934621-C-A | ** | |||||||
10959794-GCACTC-G | ** | |||||||
10961410-C-T | ** | |||||||
10961416-C-CATTGCTCTCT | ** | |||||||
10961440-C-A | ** | |||||||
10968751-A-T | ** | |||||||
10974404-C-G | ** | |||||||
10974423-G-C | ** | |||||||
10976151-T-G | ** | |||||||
11007523-C-T | ** | |||||||
11011750-C-A | ** | |||||||
11022451-A-C | ** | |||||||
11030764-C-CCCCAT | ** | |||||||
11033207-C-G | ** | |||||||
13601904-T-A | 11446228-T-A | ** | ||||||
13643899-C-A | 11488223-C-A | ** | ||||||
11654052-C-G | ** | |||||||
11666870-C-A | ** | |||||||
11673486-G-A | FT451315 | ** | ||||||
13839750-G-T | 11719044-G-T | ** | ||||||
13850196-G-T | 11729490-G-T | ** | ||||||
14301986-G-T | 12181280-G-T | ** | ||||||
14339106-C-CTT | 12218401-C-CTT | 19×T | ** | |||||
14416591-ATTTAT-A | 12295888-ATTTAT-A | ** | ||||||
14431650-A-G | 12310923-A-G | ** | ||||||
14432106-T-C | 12311379-T-C | ** | ||||||
14474547-A-C | 12353816-A-C | ** | ||||||
14511978-C-A | 12400183-C-A | ** | ||||||
14560781-C-A | 12448982-C-A | ** | ||||||
14711954-G-T | 12600021-G-T | ** | ||||||
14712198-C-A | 12600265-C-A | ** | ||||||
14727179-G-T | 12615247-G-T | ** | ||||||
15254421-C-A | 13142507-C-A | ** | ||||||
15315426-C-A | 13203531-C-A | ** | ||||||
13203566-C-CAAA | 19×A | ** | ||||||
15423743-G-T | 13311863-G-T | ** | ||||||
15476348-GATTCTC-G | 13364468-GATTCTC-G | ** | ||||||
15547097-C-A | 13435217-C-A | ** | ||||||
15643647-G-T | 13531767-G-T | ** | ||||||
15648822-C-A | 13536942-C-A | ** | ||||||
15753291-C-A | 13641411-C-A | ** | ||||||
15882584-T-G | 13770704-T-G | ** | ||||||
15997475-C-A | 13885595-C-A | ** | ||||||
16583877-C-A | 14471997-C-A | ** | ||||||
16725762-C-A | 14613882-C-A | ** | ||||||
17087815-A-C | 14975935-A-C | ** | ||||||
17090814-T-A | 14978934-T-A | ** | ||||||
17414794-C-A | 15302914-C-A | ** | ||||||
17466533-T-C | 15354653-T-C | ** | ||||||
17568288-A-C | 15456408-A-C | ** | ||||||
17633784-T-C | 15521904-T-C | ** | ||||||
17633785-G-A | 15521905-G-A | ** | ||||||
18177126-AT-A | 16065246-AT-A | ** | ||||||
18391779-CT-C | 16279899-CT-C | P6_Gap | ** | |||||
18462640-T-A | 16350760-T-A | P6_Dst | ** | |||||
18564885-A-C | 16453005-A-C | ** | ||||||
18630967-C-A | 16519087-C-A | ** | ||||||
18661632-T-G | 16549752-T-G | ** | ||||||
18853235-C-A | 16741355-C-A | ** | ||||||
18952979-GA-G | 16841099-GA-G | ** | ||||||
19010999-T-C | 16899119-T-C | ** | ||||||
19111014-C-A | 16999134-C-A | ** | ||||||
19202962-G-C | 17091082-G-C | ** | ||||||
19259105-T-A | 17147225-T-A | ** | ||||||
19301544-G-A | 17189664-G-A | ** | ||||||
19931656-T-A | 17819776-T-A | P5_Prx | ** | |||||
20213062-C-A | 18051176-C-A | P5_Dst | ** | |||||
20469736-C-G | 18307850-C-G | P5_Dst | ** | |||||
20655023-TGTG-T | 18493137-TGTG-T | P4_Prx | ** | |||||
20865355-C-CACAT | 18703469-C-CACAT | P4_Dst | ** | |||||
21037584-G-A | 18875698-G-A | ** | ||||||
21073412-G-T | 18911526-G-T | ** | ||||||
21438507-C-A | 19276621-C-A | ** | ||||||
21547420-T-A | 19385534-T-A | ** | ||||||
21559884-A-C | 19397998-A-C | Y134672 | ** | |||||
21905312-C-A | 19743426-C-A | ** | ||||||
22108456-C-A | 19946570-C-A | ** | ||||||
22309953-C-A | 20148067-C-A | DYZ19 | ** | |||||
22316199-C-T | 20154313-C-T | DYZ19 | ** | |||||
22342508-C-T | 20180622-C-T | DYZ19 | ** | |||||
22518127-A-C | 20356241-A-C | ** | ||||||
22793124-C-A | 20631238-C-A | FGC46224 | ** | |||||
23009387-C-T | 20847501-C-T | ** | ||||||
23026633-C-A | 20864747-C-A | ** | ||||||
23045845-C-A | 20883959-C-A | ** | ||||||
23066880-G-A | 20904994-G-A | ** | ||||||
23190351-C-A | 21028465-C-A | ** | ||||||
23255910-C-T | 21094024-C-T | ** | ||||||
23256288-C-A | 21094402-C-A | ** | ||||||
23294148-C-T | 21132262-C-T | ** | ||||||
23490943-G-A | 21329057-G-A | ** | ||||||
23609927-C-A | 21448041-C-A | ** | ||||||
23802403-AAG-A | 21640517-AAG-A | ** | ||||||
21755640-C-T | ** | |||||||
24302812-G-T | 22156665-G-T | P3_t1 | ** | |||||
24314680-C-A | 22168533-C-A | P3_t1 | ** | |||||
24314692-C-A | 22168545-C-A | P3_t1 | ** | |||||
24416810-C-A | 22270663-C-A | ** | ||||||
24502328-C-A | 22356181-C-A | ** | ||||||
26099774-C-A | 23953627-C-A | P1_Y1 | ** | |||||
26329274-T-G | 24183127-T-G | P1_Y1 | ** | |||||
28558606-A-G | 26412459-A-G | ** | ||||||
28596701-T-A | 26450554-T-A | ** | ||||||
28632108-C-A | 26485961-C-A | ** | ||||||
56844175-G-T | ** | |||||||
56851748-C-T | ** | |||||||
56858657-C-A | ** | |||||||
56860582-G-T | ** | |||||||
58981926-T-C | 56835779-T-C | *** | ||||||
21484595-T-TA | 19322709-T-TA | Z16343 | Z16857 | 11×A | *** | |||
58981931-C-G | 56835784-C-G | *** | ||||||
58981936-T-C | 56835789-T-C | *** | ||||||
13457791-C-A | 11302115-C-A | *** | ||||||
13485378-A-T | 11329702-A-T | *** | ||||||
17597506-G-GA | 15485626-G-GA | 10×A | *** | |||||
6402018-C-G | 6533977-C-G | *** | ||||||
8182205-CAAAAAA-C | 8314164-CAAAAAA-C | 18×A | *** | |||||
21730548-ATTTTT-A | 19568662-ATTTTT-A | 23×T | *** | |||||
15055079-A-T | 12943170-A-T | Y1885 FGC1581 CTS3597 | *** | |||||
16889537-AAG-A | 14777657-AAG-A | *** | ||||||
58972906-GTCCATTCCATTCGAT-G | 56826759-GTCCATTCCATTCGAT-G | *** | ||||||
14471469-CTTT-C | 12350738-CTTT-C | 19×T | *** | |||||
7157737-G-GA | 7289696-G-GA | 9×A | *** | |||||
58982112-A-G | 56835965-A-G | *** | ||||||
13448799-C-A | 11293123-C-A | *** | ||||||
13457784-T-A | 11302108-T-A | *** | ||||||
13457797-A-C | 11302121-A-C | *** | ||||||
58992435-G-C | 56846288-G-C | *** | ||||||
13456837-TATTCC-T | 11301161-TATTCC-T | 7×ATTCC | *** | |||||
13489120-C-A | 11333444-C-A | *** | ||||||
13456319-C-G | 11300643-C-G | *** | ||||||
10773088-G-A | FT255212 | *** | ||||||
17946903-GT-G | 15835023-GT-G | 11×T | *** | |||||
10772518-T-C | *** | |||||||
10807297-A-C,T | *** | |||||||
10964821-G-C | *** | |||||||
10999867-T-A | *** | |||||||
10747009-A-G | *** | |||||||
13483297-C-A | 11327621-C-A | *** | ||||||
10934801-A-C | *** | |||||||
11643706-A-G | *** | |||||||
10669374-C-G | *** | |||||||
10988554-T-A | *** | |||||||
19529116-CTTTT-C | 17417236-CTTTT-C | 14×T | *** | |||||
10669384-C-T | *** | |||||||
56828733-CCTGTCCATTCCATTC-C,CCTGTCCATTCCATT | *** | |||||||
10673574-C-G | *** | |||||||
10673579-T-TTACACTATAC | *** | |||||||
10673665-A-G | *** | |||||||
10988534-C-G | *** | |||||||
23391496-ATTT-A,AT | 21229610-ATTT-A,AT | 20×T | *** | |||||
11005117-TA-C | *** | |||||||
10845685-C-T | *** | |||||||
56835923-C-CCACTT | *** | |||||||
10958368-C-A | *** | |||||||
10759317-C-G | *** | |||||||
10964846-C-A | *** | |||||||
10999915-A-G | *** | |||||||
21211537-C-A | 19049651-C-A | *** | ||||||
10673588-A-G | *** | |||||||
10799589-C-G | *** | |||||||
13456273-C-T | 11300597-C-T | *** | ||||||
10746966-T-A | *** | |||||||
10775963-GCCATT-G | *** | |||||||
10787322-T-C | *** | |||||||
3833652-CAA-C,CA | 3965611-CAA-C,CA | 16×A | *** | |||||
16599739-T-TA | 14487859-T-TA | 10×A | *** | |||||
10756184-CTCCAT-C | *** | |||||||
16374686-G-T | 14262806-G-T | 19×A | *** | |||||
56875939-G-C | *** | |||||||
10787324-C-G | *** | |||||||
23834228-ATT-A | 21672342-ATT-A | 14×T | *** | |||||
16920186-C-A | 14808306-C-A | *** | ||||||
22792646-C-A | 20630760-C-A | *** | ||||||
10057140-C-A | 10219531-C-A | *** | ||||||
18569976-CT-C | 16458096-CT-C | 9×T | *** | |||||
10971115-C-A | *** | |||||||
23076133-C-A | 20914247-C-A | *** | ||||||
2728110-C-A | 2860069-C-A | *** | ||||||
3732438-C-A | 3864397-C-A | *** | ||||||
4222973-C-A | 4354932-C-A | *** | ||||||
4374643-C-A | 4506602-C-A | *** | ||||||
6675681-C-A | 6807640-C-A | *** | ||||||
7139463-C-A | 7271422-C-A | *** | ||||||
8055212-C-A | 8187171-C-A | *** | ||||||
8462082-A-AC,C | 8594041-A-AC,C | *** | ||||||
9117240-C-A | 9279631-C-A | *** | ||||||
10010954-A-G | 10173345-A-G | *** | ||||||
10655818-CT-C | *** | |||||||
10750964-C-A | *** | |||||||
10773078-A-G,T | *** | |||||||
10819340-C-A | *** | |||||||
13268616-G-A | 11112940-G-A | *** | ||||||
13453417-TTCATG-T | 11297741-TTCATG-T | *** | ||||||
14594217-T-C | 12482417-T-C | *** | ||||||
15750502-CTTTTT-C,CTTTTTT | 13638622-CTTTTT-C,CTTTTTT | 18×T | *** | |||||
15848863-T-C | 13736983-T-C | *** | ||||||
16085861-C-A | 13973981-C-A | *** | ||||||
16704244-C-A | 14592364-C-A | *** | ||||||
16869206-C-A | 14757326-C-A | *** | ||||||
17019618-C-A | 14907738-C-A | *** | ||||||
17212424-G-T | 15100544-G-T | *** | ||||||
17414907-TCA-T,TA | 15303027-TCA-T,TA | *** | ||||||
18906239-G-T | 16794359-G-T | *** | ||||||
18910867-C-A | 16798987-C-A | *** | ||||||
19151864-T-C | 17039984-T-C | *** | ||||||
19492877-C-A | 17380997-C-A | *** | ||||||
22045698-C-A | 19883812-C-A | *** | ||||||
22316183-T-A | 20154297-T-A | DYZ19 | *** | |||||
22867370-C-A | 20705484-C-A | *** | ||||||
22870763-C-A | 20708877-C-A | *** | ||||||
23418302-T-C | 21256416-T-C | *** | ||||||
23523804-C-A | 21361918-C-A | *** | ||||||
23651012-C-A | 21489126-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.