Wright
BigY2: 255397Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 255397 |
---|---|---|---|---|---|---|---|---|
26167299-G-GTA | 24021152-G-GTA | P1_Y1 | A* | |||||
26171320-C-A | 24025173-C-A | A20672 | P1_Y1 | A* | ||||
20747156-T-A | 18585270-T-A | P4_Prx | A* | |||||
25964107-C-T | 23817960-C-T | P1_Y1 | A* | |||||
26156827-A-C | 24010680-A-C | P1_Y1 | A* | |||||
8887138-C-T | 9019097-C-T | BY76647 | Y | + | ||||
8887334-C-T | 9019293-C-T | BY76653 | Y | + | ||||
23250301-T-G | 21088415-T-G | BY144094 | Y | Y | + | |||
13449341-A-G | 11293665-A-G | * | ||||||
25931556-AAAGG-A | 23785409-AAAGG-A | P1_Y1 | 9×AAGG | ** | ||||
14026036-A-G | 11905330-A-G | BY6826 | ** | |||||
58883701-G-T | 56707170-C-A | ** | ||||||
13710331-T-A | 11554655-T-A | ** | ||||||
58909795-G-T | 56681076-C-A | ** | ||||||
13720080-T-A | 11564404-T-A | ** | ||||||
26089873-C-T | 23943726-C-T | P1_Y1 | ** | |||||
22426958-T-A | 20265072-T-A | F5299 | DYZ19 | ** | ||||
7043074-C-T | 7175033-C-T | CTS840 | ** | |||||
13933695-C-T | 11812989-C-T | ** | ||||||
19275225-GTA-G | 17163345-GTA-G | ** | ||||||
21335285-G-A | 19173399-G-A | FT298371 | ** | |||||
8171876-C-A | 8303835-C-A | ** | ||||||
22292151-G-T | 20130265-G-T | DYZ19 | ** | |||||
21335217-A-G | 19173331-A-G | ** | ||||||
22252180-G-A | 20090294-G-A | DYZ19 | ** | |||||
22292134-G-A | 20130248-G-A | DYZ19 | ** | |||||
22505434-T-G | 20343548-T-G | DYZ19 | ** | |||||
16054923-C-A | 13943043-C-A | ** | ||||||
26376577-T-A | 24230430-T-A | A3569 | P1_Y1 | ** | ||||
22427039-C-G | 20265153-C-G | DYZ19 | ** | |||||
10859607-T-C | BY83914 | ** | ||||||
10825294-C-G | ** | |||||||
10889218-A-C | ** | |||||||
10755571-A-C | ** | |||||||
10970864-C-A | ** | |||||||
10884587-T-C | ** | |||||||
14468403-T-TA | 12347672-T-TA | 10×A | ** | |||||
10808173-G-T | ** | |||||||
10787153-T-C | ** | |||||||
10889876-A-T | ** | |||||||
5844994-C-A | 5976953-C-A | ** | ||||||
10977074-A-T | ** | |||||||
22001889-T-G | 19840003-T-G | ** | ||||||
17030851-C-A | 14918971-C-A | ** | ||||||
10959282-T-G | ** | |||||||
10959306-T-A | ** | |||||||
15789053-C-A | 13677173-C-A | ** | ||||||
21748232-C-A | 19586346-C-A | ** | ||||||
13227821-C-A | 11072145-C-A | ** | ||||||
10961373-T-C | ** | |||||||
10762215-C-A | ** | |||||||
16052264-C-A | 13940384-C-A | ** | ||||||
10832376-T-C | ** | |||||||
10832385-A-C | ** | |||||||
13710353-T-G | 11554677-T-G | ** | ||||||
13227151-C-A | 11071475-C-A | ** | ||||||
28385926-T-TAC | 26239779-T-TAC | P1_gr2 | 20×AC | ** | ||||
24870883-C-A | 22724736-C-A | IR1_R | ** | |||||
2833178-CTTTTT-C | 2965137-CTTTTT-C | 19×T | ** | |||||
10993083-T-C | ** | |||||||
28644406-C-A | 26498259-C-A | ** | ||||||
13938742-T-C | 11818036-T-C | ** | ||||||
10689045-T-C | ** | |||||||
10755469-C-T | ** | |||||||
13466391-C-A | 11310715-C-A | ** | ||||||
20214067-G-C | 18052181-G-C | P5_Dst | ** | |||||
14059318-C-A | 11938612-C-A | ** | ||||||
20557677-T-A | 18395791-T-A | P5_Dst | ** | |||||
10772703-T-C | ** | |||||||
56842879-C-G | ** | |||||||
7230882-G-T | 7362841-G-T | FT133397 | ** | |||||
10909684-A-C | ** | |||||||
10984003-TC-T | ** | |||||||
28805861-AAAATGGAATC-A | 26659714-AAAATGGAATC-A | ** | ||||||
10685601-C-A | FT429017 | ** | ||||||
10946538-T-C | ** | |||||||
17440740-C-A | 15328860-C-A | ** | ||||||
10989159-T-A | ** | |||||||
10927894-C-A | ** | |||||||
11005482-C-T | ** | |||||||
10755586-C-T | ** | |||||||
10755592-C-A | ** | |||||||
10755601-T-C | ** | |||||||
10755626-C-T | ** | |||||||
10755629-C-A | ** | |||||||
10755633-A-G | ** | |||||||
13695570-G-A | 11539894-G-A | ** | ||||||
7311582-C-A | 7443541-C-A | ** | ||||||
10759817-T-A | ** | |||||||
10094357-C-A | 10256748-C-A | ** | ||||||
11649258-C-A | ** | |||||||
10867376-C-A | ** | |||||||
10815131-T-G | ** | |||||||
18427773-G-T | 16315893-G-T | P6_Dst | ** | |||||
10884540-G-C | ** | |||||||
11670192-G-T | ** | |||||||
56843775-C-A | ** | |||||||
22661015-C-A | 20499129-C-A | ** | ||||||
10971064-CAAATT-C | ** | |||||||
13457710-AGTGTTGATTC-A | 11302034-AGTGTTGATTC-A | ** | ||||||
10946499-T-C | ** | |||||||
10946500-AC-A | ** | |||||||
10946504-C-CA | ** | |||||||
10946511-T-C | ** | |||||||
10946516-A-G | ** | |||||||
10946520-T-A | ** | |||||||
10946527-T-C | ** | |||||||
10946536-T-G | ** | |||||||
11030175-T-C | ** | |||||||
18518307-C-A | 16406427-C-A | P6_Dst | ** | |||||
19948100-C-T | 17836220-C-T | P5_Prx | ** | |||||
10832407-G-A | ** | |||||||
10889856-A-T | ** | |||||||
21531545-C-A | 19369659-C-A | ** | ||||||
10946557-T-C | ** | |||||||
28645914-C-A | 26499767-C-A | ** | ||||||
10971497-C-T | ** | |||||||
20579247-C-A | 18417361-C-A | P5_Dst | ** | |||||
10913750-G-T | ** | |||||||
23188274-C-A | 21026388-C-A | ** | ||||||
6816766-C-A | 6948725-C-A | ** | ||||||
16952542-C-A | 14840662-C-A | ** | ||||||
20655158-T-A | 18493272-T-A | P4_Prx | ** | |||||
10691375-T-G | ** | |||||||
10691379-T-C | ** | |||||||
10658639-ACTCAC-A | ** | |||||||
13197982-C-A | 11042306-C-A | ** | ||||||
10815136-T-C | ** | |||||||
10755638-T-A | ** | |||||||
10921401-A-C | ** | |||||||
19340466-T-G | 17228586-T-G | ** | ||||||
21391610-C-A | 19229724-C-A | ** | ||||||
16305861-C-G | 14193981-C-G | ** | ||||||
28794245-G-A | 26648098-G-A | ** | ||||||
11030151-C-A | ** | |||||||
13938729-C-T | 11818023-C-T | ** | ||||||
10909686-A-T | ** | |||||||
14021395-A-C | 11900689-A-C | ** | ||||||
13453383-CGGGTTGATTC-G | 11297707-CGGGTTGATTC-G | ** | ||||||
10859972-A-C | ** | |||||||
17323736-G-A | 15211856-G-A | 4×GGAA | ** | |||||
21994026-A-C | 19832140-A-C | ** | ||||||
7237285-T-A | 7369244-T-A | ** | ||||||
5409720-C-A | 5541679-C-A | ** | ||||||
8124890-C-A | 8256849-C-A | ** | ||||||
10950479-T-C | ** | |||||||
56841701-G-T | ** | |||||||
10851291-A-T | ** | |||||||
10958963-T-C | ** | |||||||
10889210-C-T | ** | |||||||
10889215-A-T | ** | |||||||
10877852-G-A | ** | |||||||
16004488-G-T | 13892608-G-T | ** | ||||||
10692849-A-C | ** | |||||||
7384736-C-A | 7516695-C-A | ** | ||||||
22167212-C-A | 20005326-C-A | ** | ||||||
10832368-C-T | ** | |||||||
10832373-C-T | ** | |||||||
26098049-T-A | 23951902-T-A | P1_Y1 | ** | |||||
10692817-A-C | ** | |||||||
11018243-C-A | ** | |||||||
13725627-A-T | 11569951-A-T | ** | ||||||
10755441-C-T | ** | |||||||
15435207-C-A | 13323327-C-A | ** | ||||||
15381194-A-C | 13269314-A-C | ** | ||||||
10763357-T-A | ** | |||||||
10763369-C-G | ** | |||||||
11650341-C-A | ** | |||||||
10913764-T-A | ** | |||||||
10912252-A-G | ** | |||||||
7182144-C-A | 7314103-C-A | ** | ||||||
10662093-C-A | ** | |||||||
10824423-G-T | ** | |||||||
8824221-C-A | 8956180-C-A | ** | ||||||
10889865-G-T | ** | |||||||
10826558-C-T | ** | |||||||
9183743-C-A | 9346134-C-A | ** | ||||||
3341379-C-A | 3473338-C-A | ** | ||||||
13952562-C-A | 11831856-C-A | ** | ||||||
10816534-T-C | ** | |||||||
10889867-TTATCA-T | ** | |||||||
11038113-T-A | ** | |||||||
6773315-C-A | 6905274-C-A | ** | ||||||
10832397-A-T | ** | |||||||
13227138-C-T | 11071462-C-T | FT441331 | ** | |||||
28505183-C-A | 26359036-C-A | ** | ||||||
10844059-T-A | ** | |||||||
20004077-C-A | 17892197-C-A | P5_Prx | ** | |||||
22997477-C-A | 20835591-C-A | ** | ||||||
16295787-C-A | 14183907-C-A | ** | ||||||
10655221-G-T | ** | |||||||
10802352-C-A | ** | |||||||
19674826-A-C | 17562946-A-C | P5_Prx | ** | |||||
10961379-C-A | ** | |||||||
26204671-G-C | 24058524-G-C | P1_Y1 | ** | |||||
22427029-C-G | 20265143-C-G | DYZ19 | ** | |||||
22427037-A-T | 20265151-A-T | FGC81065 | DYZ19 | ** | ||||
14700822-A-G | 12588888-A-G | ** | ||||||
10894428-C-T | ** | |||||||
10900923-A-G | ** | |||||||
7319140-C-A | 7451099-C-A | ** | ||||||
15918460-C-A | 13806580-C-A | ** | ||||||
10884557-C-T | ** | |||||||
10884567-C-G | ** | |||||||
10884589-C-CTCCAT | ** | |||||||
10884632-C-G | ** | |||||||
16045022-C-A | 13933142-C-A | ** | ||||||
13929919-C-A | 11809213-C-A | ** | ||||||
22766573-C-A | 20604687-C-A | ** | ||||||
10655239-G-T | FT428230 | ** | ||||||
10941758-A-T | ** | |||||||
14908472-C-A | 12796539-C-A | ** | ||||||
19678801-T-G | 17566921-T-G | P5_Prx | ** | |||||
11004422-T-TTTGAG | ** | |||||||
17648280-T-C | 15536400-T-C | ** | ||||||
19489259-G-A | 17377379-G-A | ** | ||||||
10993088-T-G | ** | |||||||
10993096-T-A | ** | |||||||
8057171-A-G | 8189130-A-G | FT2800 | ** | |||||
10955291-C-A | ** | |||||||
7332965-C-A | 7464924-C-A | ** | ||||||
10655246-A-T | ** | |||||||
10981253-C-A | ** | |||||||
10899250-C-A | ** | |||||||
7917109-C-A | 8049068-C-A | ** | ||||||
11016367-C-A | ** | |||||||
15379358-A-C | 13267478-A-C | ** | ||||||
14605729-C-A | 12493931-C-A | ** | ||||||
22080932-G-T | 19919046-G-T | ** | ||||||
10907824-C-A | ** | |||||||
13705495-GGA-G | 11549819-GGA-G | ** | ||||||
11033391-G-T | ** | |||||||
10808032-A-C | ** | |||||||
10832402-A-T | ** | |||||||
13475517-C-A | 11319841-C-A | ** | ||||||
20004033-C-A | 17892153-C-A | FT452483 | P5_Prx | ** | ||||
10787163-T-C | ** | |||||||
3093894-C-A | 3225853-C-A | ** | ||||||
28794257-G-A | 26648110-G-A | ** | ||||||
3500584-T-A | 3632543-T-A | ** | ||||||
23997337-G-T | 21851190-G-T | ** | ||||||
10653525-C-T | ** | |||||||
11651144-T-A | ** | |||||||
10899270-C-A | ** | |||||||
9141756-A-C | 9304147-A-C | ** | ||||||
8080437-G-T | 8212396-G-T | ** | ||||||
10927858-A-G | ** | |||||||
10927899-C-CACTCA | ** | |||||||
13598581-C-A | 11442905-C-A | ** | ||||||
21473753-C-T | 19311867-C-T | ** | ||||||
13938735-A-G | 11818029-A-G | ** | ||||||
22427751-T-C | 20265865-T-C | DYZ19 | ** | |||||
15630425-C-T | 13518545-C-T | ** | ||||||
2812776-GATT-G | 2944735-GATT-G | ** | ||||||
2909565-G-T | 3041524-G-T | ** | ||||||
3016470-C-A | 3148429-C-A | ** | ||||||
3093953-C-A | 3225912-C-A | ** | ||||||
3205773-T-C | 3337732-T-C | ** | ||||||
3205898-T-A | 3337857-T-A | ** | ||||||
3229557-G-A | 3361516-G-A | ** | ||||||
3272844-A-T | 3404803-A-T | ** | ||||||
3366281-A-G | 3498240-A-G | ** | ||||||
3366287-G-T | 3498246-G-T | ** | ||||||
3366309-G-T | 3498268-G-T | ** | ||||||
3497098-G-T | 3629057-G-T | ** | ||||||
3526631-A-T | 3658590-A-T | FT88321 | ** | |||||
3544539-A-T | 3676498-A-T | ** | ||||||
3550013-G-T | 3681972-G-T | ** | ||||||
3559928-T-G | 3691887-T-G | ** | ||||||
3640752-T-A | 3772711-T-A | ** | ||||||
3649035-A-T | 3780994-A-T | ** | ||||||
3662605-CTATA-C | 3794564-CTATA-C | 8×TA | ** | |||||
3670821-C-A | 3802780-C-A | ** | ||||||
3744886-G-T | 3876845-G-T | ** | ||||||
4144964-G-T | 4276923-G-T | ** | ||||||
4215773-G-T | 4347732-G-T | ** | ||||||
4220294-G-C | 4352253-G-C | ** | ||||||
4231927-G-T | 4363886-G-T | ** | ||||||
4293849-C-A | 4425808-C-A | ** | ||||||
4300722-C-CA | 4432681-C-CA | 9×A | ** | |||||
4357905-G-A | 4489864-G-A | ** | ||||||
4416767-C-A | 4548726-C-A | ** | ||||||
4422214-A-G | 4554173-A-G | ** | ||||||
4447629-T-G | 4579588-T-G | ** | ||||||
4472202-T-C | 4604161-T-C | ** | ||||||
4636030-C-G | 4767989-C-G | ** | ||||||
4636033-G-A | 4767992-G-A | ** | ||||||
4636048-C-T | 4768007-C-T | ** | ||||||
4636049-C-G | 4768008-C-G | ** | ||||||
4636050-C-T | 4768009-C-T | ** | ||||||
4784382-G-T | 4916341-G-T | ** | ||||||
4969201-C-A | 5101160-C-A | ** | ||||||
4996049-C-A | 5128008-C-A | ** | ||||||
5038629-C-A | 5170588-C-A | ** | ||||||
5174346-C-G | 5306305-C-G | ** | ||||||
5349531-C-A | 5481490-C-A | ** | ||||||
5471188-C-A | 5603147-C-A | ** | ||||||
5845201-C-A | 5977160-C-A | ** | ||||||
5950697-C-T | 6082656-C-T | FT88913 | ** | |||||
6070033-C-A | 6201992-C-A | ** | ||||||
6264497-T-C | 6396456-T-C | IR3_Dst | ** | |||||
6402668-T-A | 6534627-T-A | ** | ||||||
6621605-C-A | 6753564-C-A | ** | ||||||
6666130-G-A | 6798089-G-A | ** | ||||||
6882541-C-A | 7014500-C-A | ** | ||||||
7063483-T-C | 7195442-T-C | ** | ||||||
7094546-C-A | 7226505-C-A | ** | ||||||
7165444-T-G | 7297403-T-G | FT67081 | ** | |||||
7167260-C-A | 7299219-C-A | ** | ||||||
7230784-C-T | 7362743-C-T | BY38192 | ** | |||||
7230794-A-G | 7362753-A-G | BY38193 | ** | |||||
7230898-A-G | 7362857-A-G | FT133398 | ** | |||||
7230904-T-C | 7362863-T-C | FT133399 | ** | |||||
7313609-T-G | 7445568-T-G | ** | ||||||
7318475-G-T | 7450434-G-T | ** | ||||||
7347041-T-A | 7479000-T-A | ** | ||||||
8057173-A-G | 8189132-A-G | FTB17017 | ** | |||||
8849988-G-A | 8981947-G-A | ** | ||||||
8849999-C-A | 8981958-C-A | ** | ||||||
8850028-T-C | 8981987-T-C | ** | ||||||
8850034-C-A | 8981993-C-A | A19467 | ** | |||||
8850044-T-C | 8982003-T-C | ** | ||||||
9079843-T-C | 9242234-T-C | ** | ||||||
9181025-C-G | 9343416-C-G | ** | ||||||
9183737-C-G | 9346128-C-G | ** | ||||||
9183749-T-C | 9346140-T-C | ** | ||||||
9900214-A-T | 10062605-A-T | ** | ||||||
10003025-C-A | 10165416-C-A | ** | ||||||
10050818-G-T | 10213209-G-T | ** | ||||||
10077661-C-A | 10240052-C-A | ** | ||||||
10623727-T-A | ** | |||||||
10623737-G-T | ** | |||||||
10623751-C-T | FT258102 | ** | ||||||
10623764-C-G | ** | |||||||
10653483-A-T | ** | |||||||
10653532-A-G | ** | |||||||
10657891-A-C | ** | |||||||
10672431-T-G | ** | |||||||
10687072-C-A | ** | |||||||
10692813-A-T | ** | |||||||
10692834-A-T | ** | |||||||
10692848-A-T | ** | |||||||
10744522-TCCACTGCATC-T | ** | |||||||
10746973-C-T | ** | |||||||
10747039-A-ATTTCT | ** | |||||||
10751053-C-G | ** | |||||||
10751245-AATTAT-A | ** | |||||||
10751256-T-C | ** | |||||||
10751261-T-C | ** | |||||||
10755119-T-A | ** | |||||||
10755415-TCC-T | ** | |||||||
10755419-TTCC-T | ** | |||||||
10757193-G-A | ** | |||||||
10764178-A-T | ** | |||||||
10765091-C-T | ** | |||||||
10772678-T-G | ** | |||||||
10774135-C-A | ** | |||||||
10775157-G-A | ** | |||||||
10775171-G-C | ** | |||||||
10779000-C-A | ** | |||||||
10782654-C-A | ** | |||||||
10787164-G-T | ** | |||||||
10787167-T-G | ** | |||||||
10789067-C-T | ** | |||||||
10791556-T-C | ** | |||||||
10796661-CC-T | ** | |||||||
10809022-GCATTCCGTTC-G | ** | |||||||
10816531-C-T | ** | |||||||
10816558-A-T | ** | |||||||
10819098-C-T | ** | |||||||
10824428-G-T | ** | |||||||
10824433-G-T | ** | |||||||
10825292-T-C | ** | |||||||
10825307-T-G | ** | |||||||
10826455-CCA-C | ** | |||||||
10826460-C-CTT | ** | |||||||
10828424-A-C | ** | |||||||
10832386-C-A | ** | |||||||
10832415-C-G | ** | |||||||
10840732-C-T | FT183016 | ** | ||||||
10850368-C-A | ** | |||||||
10851279-A-T | ** | |||||||
10877843-C-CACTTT | ** | |||||||
10888642-C-T | ** | |||||||
10889219-A-G | ** | |||||||
10889824-C-G | ** | |||||||
10889842-C-T | ** | |||||||
10899267-C-T | FT435889 | ** | ||||||
10901174-C-A | ** | |||||||
10902912-G-T | ** | |||||||
10905091-AC-A | ** | |||||||
10905104-TG-T | ** | |||||||
10905110-A-T | ** | |||||||
10905300-A-C | ** | |||||||
10905302-T-G | ** | |||||||
10905804-T-A | ** | |||||||
10936652-C-A | ** | |||||||
10941387-C-T | ** | |||||||
10941413-G-T | ** | |||||||
10950463-A-AGTC | ** | |||||||
10950467-T-TTC | ** | |||||||
10955305-C-CCACCT | ** | |||||||
10961368-C-T | ** | |||||||
10976081-G-T | ** | |||||||
10976200-A-C | ** | |||||||
10976359-C-T | ** | |||||||
10989158-A-T | ** | |||||||
10990292-C-A | ** | |||||||
10993270-T-C | FT439544 | ** | ||||||
11000310-C-A | ** | |||||||
11013939-A-G | ** | |||||||
11013943-C-A | ** | |||||||
11017340-G-T | ** | |||||||
11020861-A-T | ** | |||||||
11022792-C-A | ** | |||||||
11022864-T-G | ** | |||||||
11027114-C-A | ** | |||||||
11034865-T-C | ** | |||||||
13227134-C-T | 11071458-C-T | ** | ||||||
13227144-T-C | 11071468-T-C | ** | ||||||
13227160-A-G | 11071484-A-G | ** | ||||||
13341199-G-C | 11185523-G-C | ** | ||||||
13341206-G-T | 11185530-G-T | ** | ||||||
13453344-C-CTGTACTCAGGTTG | 11297668-C-CTGTACTCAGGTTG | ** | ||||||
13474532-T-G | 11318856-T-G | ** | ||||||
13474534-A-C | 11318858-A-C | ** | ||||||
13512742-C-G | 11357066-C-G | ** | ||||||
13714981-G-C | 11559305-G-C | ** | ||||||
11651142-A-C | ** | |||||||
11653224-G-T | ** | |||||||
11670197-C-G | FT451139 | ** | ||||||
11671656-T-G | ** | |||||||
11672946-G-C | ** | |||||||
11673664-A-C | ** | |||||||
13856959-A-C | 11736253-A-C | ** | ||||||
13938716-G-T | 11818010-G-T | ** | ||||||
13938718-G-A | 11818012-G-A | ** | ||||||
13938722-G-C | 11818016-G-C | ** | ||||||
13938740-G-T | 11818034-G-T | ** | ||||||
13938743-G-A | 11818037-G-A | ** | ||||||
13938747-T-C | 11818041-T-C | ** | ||||||
13941987-A-C | 11821281-A-C | ** | ||||||
13984209-T-G | 11863503-T-G | ** | ||||||
13994716-T-G | 11874010-T-G | ** | ||||||
14247591-T-A | 12126885-T-A | ** | ||||||
14279866-G-C | 12159160-G-C | ** | ||||||
14344997-A-C | 12224292-A-C | ** | ||||||
14532987-C-A | 12421188-C-A | ** | ||||||
14718445-T-C | 12606513-T-C | ** | ||||||
14737846-G-T | 12625914-G-T | ** | ||||||
14792837-A-C | 12680908-A-C | ** | ||||||
15138018-T-TA | 13026105-T-TA | ** | ||||||
15443907-C-A | 13332027-C-A | ** | ||||||
16003639-A-G | 13891759-A-G | ** | ||||||
16090540-T-C | 13978660-T-C | ** | ||||||
16221559-C-A | 14109679-C-A | ** | ||||||
16276062-G-T | 14164182-G-T | ** | ||||||
16305837-A-C | 14193957-A-C | FGC55074 | ** | |||||
16305855-G-T | 14193975-G-T | ** | ||||||
16522453-T-G | 14410573-T-G | ** | ||||||
16668009-G-A | 14556129-G-A | ** | ||||||
16829167-T-A | 14717287-T-A | ** | ||||||
17247194-A-T | 15135314-A-T | ** | ||||||
17375045-C-A | 15263165-C-A | ** | ||||||
17379188-T-G | 15267308-T-G | ** | ||||||
17449276-T-G | 15337396-T-G | ** | ||||||
17450133-C-A | 15338253-C-A | ** | ||||||
17617118-C-A | 15505238-C-A | ** | ||||||
17697091-C-T | 15585211-C-T | ** | ||||||
17902343-A-C | 15790463-A-C | ** | ||||||
17926545-A-AC | 15814665-A-AC | ** | ||||||
17926548-A-AC | 15814668-A-AC | ** | ||||||
18086233-A-C | 15974353-A-C | ** | ||||||
18090149-C-A | 15978269-C-A | ** | ||||||
18188037-G-T | 16076157-G-T | ** | ||||||
18465500-G-T | 16353620-G-T | P6_Dst | ** | |||||
18511271-G-T | 16399391-G-T | P6_Dst | ** | |||||
18626608-A-G | 16514728-A-G | ** | ||||||
18626610-T-G | 16514730-T-G | ** | ||||||
18626613-G-A | 16514733-G-A | ** | ||||||
18647599-T-TG | 16535719-T-TG | ** | ||||||
18736269-C-T | 16624389-C-T | ** | ||||||
18800743-A-G | 16688863-A-G | ** | ||||||
18891144-A-C | 16779264-A-C | ** | ||||||
19022360-C-A | 16910480-C-A | ** | ||||||
19330312-A-G | 17218432-A-G | ** | ||||||
19479854-C-A | 17367974-C-A | ** | ||||||
19674846-T-A | 17562966-T-A | P5_Prx | ** | |||||
19678691-C-A | 17566811-C-A | P5_Prx | ** | |||||
19726192-A-AC | 17614312-A-AC | P5_Prx | ** | |||||
19927011-T-G | 17815131-T-G | P5_Prx | ** | |||||
19966517-T-G | 17854637-T-G | P5_Prx | ** | |||||
20521910-C-A | 18360024-C-A | P5_Dst | ** | |||||
20521929-T-A | 18360043-T-A | P5_Dst | ** | |||||
20579214-G-T | 18417328-G-T | P5_Dst | ** | |||||
20579214-G-GTT | 18417328-G-GTT | P5_Dst | ** | |||||
20888555-A-T | 18726669-A-T | P4_Dst | ** | |||||
21058181-G-T | 18896295-G-T | ** | ||||||
21065967-T-C | 18904081-T-C | FT144220 | ** | |||||
21139401-T-G | 18977515-T-G | ** | ||||||
21243147-C-A | 19081261-C-A | ** | ||||||
21273684-C-T | 19111798-C-T | ** | ||||||
21306626-GA-G | 19144740-GA-G | ** | ||||||
21328711-C-A | 19166825-C-A | ** | ||||||
21335225-A-G | 19173339-A-G | ** | ||||||
21335233-T-C | 19173347-T-C | ** | ||||||
21335239-T-C | 19173353-T-C | ** | ||||||
21335240-G-A | 19173354-G-A | ** | ||||||
21335259-A-T | 19173373-A-T | ** | ||||||
21335265-G-T | 19173379-G-T | ** | ||||||
21335271-T-A | 19173385-T-A | ** | ||||||
21335303-G-A | 19173417-G-A | ** | ||||||
21335310-AC-A | 19173424-AC-A | ** | ||||||
21335313-G-GA | 19173427-G-GA | ** | ||||||
21352265-A-C | 19190379-A-C | ** | ||||||
21381720-C-A | 19219834-C-A | ** | ||||||
21468081-A-T | 19306195-A-T | ** | ||||||
21473763-C-A | 19311877-C-A | ** | ||||||
21552261-A-C | 19390375-A-C | ** | ||||||
21792804-G-T | 19630918-G-T | ** | ||||||
21793800-C-G | 19631914-C-G | ** | ||||||
21922100-AAAAG-A | 19760214-AAAAG-A | ** | ||||||
22252179-G-A | 20090293-G-A | DYZ19 | ** | |||||
22540498-G-A | 20378612-G-A | ** | ||||||
22692677-A-C | 20530791-A-C | ** | ||||||
22857005-G-T | 20695119-G-T | ** | ||||||
23004305-CT-C | 20842419-CT-C | ** | ||||||
23005556-G-T | 20843670-G-T | ** | ||||||
23006757-T-C | 20844871-T-C | ** | ||||||
23137076-C-A | 20975190-C-A | ** | ||||||
23361530-T-G | 21199644-T-G | ** | ||||||
23439011-C-A | 21277125-C-A | ** | ||||||
23514477-C-A | 21352591-C-A | ** | ||||||
23516521-G-T | 21354635-G-T | ** | ||||||
23825267-T-G | 21663381-T-G | ** | ||||||
23832943-C-A | 21671057-C-A | ** | ||||||
25995074-T-G | 23848927-T-G | P1_Y1 | ** | |||||
26120053-C-A | 23973906-C-A | P1_Y1 | ** | |||||
28485931-C-A | 26339784-C-A | ** | ||||||
28649304-A-C | 26503157-A-C | ** | ||||||
28754376-T-C | 26608229-T-C | ** | ||||||
28798887-A-C | 26652740-A-C | ** | ||||||
56681143-G-T | ** | |||||||
56844681-G-T | ** | |||||||
56848322-C-A | ** | |||||||
31160-G-C | ** | |||||||
23476006-G-T | 21314120-G-T | 11×T | *** | |||||
58971887-C-CAT | 56825740-C-CAT | 12×AT | *** | |||||
22729681-TACA-T | 20567795-TACA-T | 7×ACA | *** | |||||
58990487-C-T | 56844340-C-T | *** | ||||||
58984664-C-G | 56838517-C-G | *** | ||||||
22447890-G-C | 20286004-G-C | DYZ19 | *** | |||||
22360220-G-T | 20198334-G-T | DYZ19 | *** | |||||
10669486-T-C | *** | |||||||
10775061-T-A,G | *** | |||||||
10959016-C-A | *** | |||||||
10958975-G-C | *** | |||||||
10686663-T-C | *** | |||||||
10969447-C-A | *** | |||||||
19006136-CAAA-C | 16894256-CAAA-C | 21×A | *** | |||||
8160178-C-CAA | 8292137-C-CAA | 20×A | *** | |||||
19414-T-A | *** | |||||||
10956594-C-T | *** | |||||||
13809202-A-T | 11688496-A-T | *** | ||||||
23475257-CT-C,CTT | 21313371-CT-C,CTT | 15×T | *** | |||||
17843091-AT-A,ATT | 15731211-AT-A,ATT | 18×T | *** | |||||
10847098-C-T | *** | |||||||
19172799-GT-G,GTT | 17060919-GT-G,GTT | 17×T | *** | |||||
10926657-CCGTTG-C,CCATTC | *** | |||||||
2790410-C-A | 2922369-C-A | *** | ||||||
16320318-A-G | 14208438-A-G | *** | ||||||
13217947-C-A | 11062271-C-A | *** | ||||||
10770634-T-A,G | *** | |||||||
14180854-C-A | 12060148-C-A | *** | ||||||
2860458-GTTTTT-G | 2992417-GTTTTT-G | 18×T | *** | |||||
10764578-T-C | *** | |||||||
22538056-C-A | 20376170-C-A | *** | ||||||
3098-A-C | *** | |||||||
10982616-C-A | *** | |||||||
7182251-C-A | 7314210-C-A | *** | ||||||
23311051-G-A | 21149165-G-A | *** | ||||||
16921535-A-C | 14809655-A-C | *** | ||||||
22360190-A-C | 20198304-A-C | DYZ19 | *** | |||||
14227652-C-A | 12106946-C-A | *** | ||||||
22360221-T-G | 20198335-T-G | DYZ19 | *** | |||||
4243117-C-A | 4375076-C-A | *** | ||||||
8735016-C-A | 8866975-C-A | *** | ||||||
10018460-ACAGACAGGGTCTCATCATTTTGTTGCAACCCTCCTGAAC-A | 10180851-ACAGACAGGGTCTCATCATTTTGTTGCAACCCTCCTGAAC-A | *** | ||||||
10668983-G-A | *** | |||||||
10764580-C-CTTTTG | *** | |||||||
10937430-CAATCA-C | *** | |||||||
10955492-ATT-A,ACT | *** | |||||||
10958974-T-C | *** | |||||||
10973897-C-G | *** | |||||||
13227062-T-C | 11071386-T-C | *** | ||||||
13922376-T-C | 11801670-T-C | *** | ||||||
16226380-A-G | 14114500-A-G | *** | ||||||
17191689-T-C | 15079809-T-C | *** | ||||||
17713829-A-T | 15601949-A-T | *** | ||||||
22447896-T-C | 20286010-T-C | DYZ19 | *** | |||||
27127803-GTCTT-G | 24981656-GTCTT-G | P1_g3 | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.