Rutledge
BigY2: 392622MDKA Birth: United Kingdom
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 392622 |
---|---|---|---|---|---|---|---|---|
19798808-T-C | 17686928-T-C | P5_Prx | A* | |||||
19914067-G-A | 17802187-G-A | P5_Prx | A* | |||||
22224493-C-T | 20062607-C-T | DYZ19 | A* | |||||
22290805-G-A | 20128919-G-A | DYZ19 | A* | |||||
22306085-T-C | 20144199-T-C | DYZ19 | A* | |||||
26243447-A-AAG | 24097300-A-AAG | P1_Y1 | A* | |||||
13814381-C-T | 11693675-C-T | Y89667 | + | |||||
7596627-T-C | 7728586-T-C | Y46160 | Y | Y | + | |||
9013493-T-C | 9175884-T-C | Y48111 | Y | + | ||||
9742528-G-A | 9904919-G-A | BY80693 | IR3_Prx | + | ||||
14846677-T-C | 12734743-T-C | Y49964 | Y | Y | + | |||
15273229-G-T | 13161318-G-T | Y50470 | Y | Y | + | |||
15605973-T-C | 13494093-T-C | Y50892 | Y | Y | + | |||
16589945-C-T | 14478065-C-T | Y52087 | Y | Y | + | |||
17118718-A-T | 15006838-A-T | Y52792 | Y | Y | + | |||
17167786-T-C | 15055906-T-C | Y52854 | Y | Y | + | |||
18917801-T-A | 16805921-T-A | Y55054 | Y | Y | + | |||
18979820-T-A | 16867940-T-A | Y55155 | Y | Y | + | |||
19279155-C-A | 17167275-C-A | Y55649 | Y | Y | + | |||
21256752-G-T | 19094866-G-T | Y56411 | Y | Y | + | |||
21723547-T-G | 19561661-T-G | Y57123 | Y | Y | + | |||
22080284-C-T | 19918398-C-T | Y57597 | Y | Y | + | |||
22749818-T-G | 20587932-T-G | Y58237 | Y | Y | + | |||
23023205-C-G | 20861319-C-G | Y58595 | Y | Y | + | |||
23263269-G-A | 21101383-G-A | Y58957 | Y | Y | + | |||
23549632-G-T | 21387746-G-T | Y59324 | Y | Y | + | |||
14025562-A-AAAAGAAAGAAAGAAAG | 11904856-A-AAAAGAAAGAAAGAAAG | 12×AAAG | * | |||||
15882587-C-CT | 13770707-C-CT | 9×T | ** | |||||
13687972-G-C | 11532296-G-C | * | ||||||
19412006-G-GAAAGAGAA | 17300126-G-GAAAGAGAA | 14×AGAA | * | |||||
22279143-A-G | 20117257-A-G | DYZ19 | * | |||||
20084406-C-CTCTTTCTT | 17972526-C-CTCTTTCTT | P5_Dst | 14×TCTT | ** | ||||
18454862-T-C | 16342982-T-C | P6_Dst | ** | |||||
9987714-C-A | 10150105-C-A | ** | ||||||
18454878-TCC-T | 16342998-TCC-T | P6_Dst | ** | |||||
22460926-G-C | 20299040-G-C | FGC20563 | DYZ19 | ** | ||||
24071390-G-A | 21925243-G-A | Z1909 A1487 | A1510 | P3_b1 | ** | |||
3550544-T-A | 3682503-T-A | ** | ||||||
27417794-A-C | 25271647-A-C | FGC78733 | P1_g3 | ** | ||||
26991325-A-T | 24845178-A-T | P1_r4 | ** | |||||
10023000-C-A | 10185391-C-A | ** | ||||||
20998282-C-A | 18836396-C-A | P4_Dst | ** | |||||
13480116-C-A | 11324440-C-A | ** | ||||||
16868746-CATATATATATATATATATATATATAT-C | 14756866-CATATATATATATATATATATATATAT-C | 22×AT | ** | |||||
3492663-C-A | 3624622-C-A | ** | ||||||
26097968-C-A | 23951821-C-A | P1_Y1 | ** | |||||
8370068-G-T | 8502027-G-T | ** | ||||||
13141148-C-G | 10630634-C-G | F18115 | ** | |||||
17792264-T-G | 15680384-T-G | ** | ||||||
7704924-C-A | 7836883-C-A | ** | ||||||
16320416-TA-T | 14208536-TA-T | 9×A | ** | |||||
18147556-G-T | 16035676-G-T | ** | ||||||
14251759-C-A | 12131053-C-A | ** | ||||||
10785312-C-G | ** | |||||||
10672185-A-T | ** | |||||||
17006493-GT-G | 14894613-GT-G | 10×T | ** | |||||
17361058-C-A | 15249178-C-A | 25×A | ** | |||||
22164529-C-A | 20002643-C-A | FTB30328 | ** | |||||
7337311-C-A | 7469270-C-A | ** | ||||||
10942693-A-G | ** | |||||||
14500200-C-A | 12388405-C-A | ** | ||||||
10750998-C-A | ** | |||||||
19202921-G-A | 17091041-G-A | ** | ||||||
22658185-C-A | 20496299-C-A | FT306563 | ** | |||||
7021809-C-A | 7153768-C-A | ** | ||||||
6454512-C-A | 6586471-C-A | ** | ||||||
9063859-CTTTTT-C | 9226250-CTTTTT-C | 16×T | ** | |||||
21455911-C-A | 19294025-C-A | ** | ||||||
10942629-T-G | ** | |||||||
10942631-T-A | ** | |||||||
10821974-T-C | ** | |||||||
11019423-C-CTAATG | ** | |||||||
15860202-C-A | 13748322-C-A | ** | ||||||
10965647-T-C | ** | |||||||
10965663-T-C | ** | |||||||
10965664-G-A | ** | |||||||
10885173-A-T | ** | |||||||
10885175-TGAA-T | ** | |||||||
10976194-C-A | ** | |||||||
10755344-T-A | ** | |||||||
11668653-C-A | ** | |||||||
20741858-T-TC | 18579972-T-TC | P4_Prx | ** | |||||
11038155-T-A | ** | |||||||
11000223-TTCCAC-T | ** | |||||||
13468250-A-C | 11312574-A-C | ** | ||||||
10808605-C-T | ** | |||||||
11014625-A-G | ** | |||||||
11014668-T-CC | ** | |||||||
11014678-C-T | ** | |||||||
11014680-C-A | ** | |||||||
11014705-C-T | ** | |||||||
11014707-A-T | ** | |||||||
11014718-C-G | ** | |||||||
13468252-A-G | 11312576-A-G | ** | ||||||
10652572-C-A | ** | |||||||
18406938-C-A | 16295058-C-A | P6_Gap | ** | |||||
17367825-C-A | 15255945-C-A | ** | ||||||
3591822-C-A | 3723781-C-A | ** | ||||||
17338526-AG-A | 15226646-AG-A | ** | ||||||
10785279-A-G | ** | |||||||
14911010-C-A | 12799077-C-A | ** | ||||||
28716282-C-A | 26570135-C-A | ** | ||||||
4213098-C-A | 4345057-C-A | ** | ||||||
6326215-CA-C | 6458174-CA-C | IR3_Dst | ** | |||||
28507429-C-A | 26361282-C-A | ** | ||||||
13197843-CAAAAAAAAAAAAAAAAAAAAAAAA-C | 42×A | ** | ||||||
13487092-C-A | 11331416-C-A | ** | ||||||
10965621-C-CTGCAT | ** | |||||||
16017779-C-A | 13905899-C-A | ** | ||||||
14351112-C-A | 12230407-C-A | ** | ||||||
8694153-C-A | 8826112-C-A | ** | ||||||
22088727-C-A | 19926841-C-A | ** | ||||||
17277229-C-A | 15165349-C-A | ** | ||||||
10751023-C-CGGGTT | ** | |||||||
15342669-C-A | 13230788-C-A | ** | ||||||
4872578-C-A | 5004537-C-A | ** | ||||||
17597970-C-A | 15486090-C-A | ** | ||||||
18159172-C-A | 16047292-C-A | ** | ||||||
14506951-C-A | 12395156-C-A | ** | ||||||
27872569-C-A | 25726422-C-A | P1_Y2 | ** | |||||
10794764-G-T | ** | |||||||
3817429-C-A | 3949388-C-A | ** | ||||||
19088279-C-A | 16976399-C-A | ** | ||||||
10939017-A-T | ** | |||||||
10939029-T-C | ** | |||||||
14562364-G-T | 12450564-G-T | FTB43567 | ** | |||||
24475196-C-T | 22329049-C-T | ** | ||||||
10630613-C-A | ** | |||||||
10630619-C-T | ** | |||||||
10630628-C-T | ** | |||||||
10630635-A-G | ** | |||||||
10630638-C-T | ** | |||||||
10630639-C-G | ** | |||||||
13460782-T-A | 11305106-T-A | ** | ||||||
19506788-C-A | 17394908-C-A | ** | ||||||
15171346-A-T | 13059432-A-T | ** | ||||||
15912081-C-A | 13800201-C-A | FTA18900 | ** | |||||
13226978-C-A | 11071302-C-A | ** | ||||||
23317684-TTTG-T | 21155798-TTTG-T | ** | ||||||
10748331-C-A | ** | |||||||
11009320-C-A | ** | |||||||
22027809-C-A | 19865923-C-A | ** | ||||||
19247093-C-A | 17135213-C-A | ** | ||||||
10942619-C-A | ** | |||||||
13460766-C-G | 11305090-C-G | ** | ||||||
13460787-C-A | 11305111-C-A | ** | ||||||
21505600-C-A | 19343714-C-A | ** | ||||||
28687450-C-A | 26541303-C-A | ** | ||||||
28589326-C-A | 26443179-C-A | ** | ||||||
13899351-C-A | 11778645-C-A | ** | ||||||
10785295-T-G | ** | |||||||
17461923-C-A | 15350043-C-A | ** | ||||||
9040925-A-ATATATATAT | 9203316-A-ATATATATAT | 17×AT | ** | |||||
2738727-C-A | 2870686-C-A | ** | ||||||
15449921-A-G | 13338041-A-G | ** | ||||||
13208102-C-A | 11052426-C-A | ** | ||||||
17654930-C-A | 15543050-C-A | ** | ||||||
2978787-C-A | 3110746-C-A | ** | ||||||
13228231-C-A | 11072555-C-A | ** | ||||||
4928940-C-A | 5060899-C-A | ** | ||||||
56734767-G-A | ** | |||||||
7579981-C-A | 7711940-C-A | ** | ||||||
23142013-G-T | 20980127-G-T | ** | ||||||
15171427-C-A | 13059513-C-A | ** | ||||||
56875476-C-A | ** | |||||||
14385385-C-A | 12264681-C-A | ** | ||||||
17337680-C-A | 15225800-C-A | ** | ||||||
21455682-C-A | 19293796-C-A | ** | ||||||
17955947-C-A | 15844067-C-A | ** | ||||||
17382452-C-A | 15270572-C-A | ** | ||||||
7132053-C-A | 7264012-C-A | ** | ||||||
13462266-C-T | 11306590-C-T | ** | ||||||
14219570-C-A | 12098864-C-A | ** | ||||||
9799166-C-A | 9961557-C-A | ** | ||||||
23434337-C-A | 21272451-C-A | ** | ||||||
15533630-C-A | 13421750-C-A | ** | ||||||
11020665-G-T | ** | |||||||
28774447-C-A | 26628300-C-A | ** | ||||||
10760647-G-T | ** | |||||||
9427490-C-A | 9589881-C-A | ** | ||||||
28500117-C-A | 26353970-C-A | ** | ||||||
7131951-G-C | 7263910-G-C | ** | ||||||
4888352-C-A | 5020311-C-A | ** | ||||||
18753049-C-A | 16641169-C-A | ** | ||||||
20025479-CTCT-C | 17913599-CTCT-C | P5_Prx | ** | |||||
16652956-C-A | 14541076-C-A | ** | ||||||
13309581-C-A | 11153905-C-A | ** | ||||||
8235549-C-A | 8367508-C-A | ** | ||||||
5785951-C-A | 5917910-C-A | ** | ||||||
4370950-C-A | 4502909-C-A | ** | ||||||
3165186-G-T | 3297145-G-T | ** | ||||||
10671884-C-A | ** | |||||||
10011195-G-T | 10173586-G-T | ** | ||||||
19558843-C-A | 17446963-C-A | ** | ||||||
14079991-G-T | 11959285-G-T | ** | ||||||
56850651-G-T | ** | |||||||
13895845-C-A | 11775139-C-A | ** | ||||||
10983947-C-T | ** | |||||||
13855013-A-T | 11734307-A-T | ** | ||||||
23552650-G-T | 21390764-G-T | ** | ||||||
10972009-A-C | ** | |||||||
22264290-G-T | 20102404-G-T | DYZ19 | ** | |||||
3935503-G-T | 4067462-G-T | ** | ||||||
10787329-C-A | ** | |||||||
6001505-C-A | 6133464-C-A | ** | ||||||
14694824-A-G | 12582890-A-G | ** | ||||||
10826530-C-T | ** | |||||||
10939008-C-T | ** | |||||||
7310011-C-A | 7441970-C-A | ** | ||||||
14302311-G-T | 12181605-G-T | ** | ||||||
13553312-C-A | 11397636-C-A | ** | ||||||
2671337-T-C | 2803296-T-C | ** | ||||||
2701241-A-G | 2833200-A-G | ** | ||||||
2812824-C-T | 2944783-C-T | ** | ||||||
3082762-G-A | 3214721-G-A | ** | ||||||
3092049-C-A | 3224008-C-A | ** | ||||||
3097334-T-A | 3229293-T-A | ** | ||||||
3203048-C-A | 3335007-C-A | ** | ||||||
3297061-G-T | 3429020-G-T | ** | ||||||
3325792-C-A | 3457751-C-A | ** | ||||||
3335242-T-C | 3467201-T-C | ** | ||||||
3340585-A-T | 3472544-A-T | ** | ||||||
3346373-A-G | 3478332-A-G | ** | ||||||
3375533-A-C | 3507492-A-C | ** | ||||||
3433441-T-C | 3565400-T-C | ** | ||||||
3440307-TTAAGA-T | 3572266-TTAAGA-T | ** | ||||||
3467587-T-A | 3599546-T-A | ** | ||||||
3482249-G-T | 3614208-G-T | ** | ||||||
3610352-G-A | 3742311-G-A | ** | ||||||
3645968-AAAGCGGT-A | 3777927-AAAGCGGT-A | ** | ||||||
3676493-T-A | 3808452-T-A | ** | ||||||
3688320-C-A | 3820279-C-A | ** | ||||||
3757409-G-T | 3889368-G-T | ** | ||||||
3791054-A-G | 3923013-A-G | ** | ||||||
3814756-C-A | 3946715-C-A | ** | ||||||
3865364-T-C | 3997323-T-C | ** | ||||||
3980173-T-A | 4112132-T-A | ** | ||||||
4021930-CTTT-C | 4153889-CTTT-C | 15×T | ** | |||||
4049052-C-A | 4181011-C-A | ** | ||||||
4080186-C-A | 4212145-C-A | ** | ||||||
4155769-G-T | 4287728-G-T | ** | ||||||
4193448-G-T | 4325407-G-T | ** | ||||||
4241411-T-C | 4373370-T-C | ** | ||||||
4370908-C-A | 4502867-C-A | ** | ||||||
4453987-C-A | 4585946-C-A | ** | ||||||
4454924-C-A | 4586883-C-A | FT320700 | ** | |||||
4463308-C-A | 4595267-C-A | ** | ||||||
4547854-C-A | 4679813-C-A | ** | ||||||
4561824-C-A | 4693783-C-A | ** | ||||||
4562028-A-C | 4693987-A-C | ** | ||||||
4627216-T-C | 4759175-T-C | ** | ||||||
4672267-G-A | 4804226-G-A | ** | ||||||
4681449-G-T | 4813408-G-T | ** | ||||||
4878285-T-C | 5010244-T-C | ** | ||||||
4900854-T-C | 5032813-T-C | ** | ||||||
4930606-A-G | 5062565-A-G | ** | ||||||
5017519-G-T | 5149478-G-T | ** | ||||||
5114619-G-T | 5246578-G-T | ** | ||||||
5191647-C-A | 5323606-C-A | ** | ||||||
5249208-C-A | 5381167-C-A | ** | ||||||
5341628-C-A | 5473587-C-A | ** | ||||||
5616742-C-A | 5748701-C-A | ** | ||||||
5643036-C-A | 5774995-C-A | ** | ||||||
5655433-A-G | 5787392-A-G | ** | ||||||
5669679-C-A | 5801638-C-A | ** | ||||||
5687473-A-G | 5819432-A-G | ** | ||||||
5712152-A-G | 5844111-A-G | ** | ||||||
5720453-A-G | 5852412-A-G | ** | ||||||
5721088-A-C | 5853047-A-C | ** | ||||||
5744329-C-A | 5876288-C-A | ** | ||||||
6031054-C-A | 6163013-C-A | ** | ||||||
6031623-C-A | 6163582-C-A | ** | ||||||
6090347-G-A | 6222306-G-A | ** | ||||||
6134781-G-T | 6266740-G-T | BY189682 | ** | |||||
6149684-C-A | 6281643-C-A | IR3_Dst | ** | |||||
6384588-G-T | 6516547-G-T | ** | ||||||
6395092-G-A | 6527051-G-A | ** | ||||||
6492537-C-A | 6624496-C-A | ** | ||||||
6510090-C-A | 6642049-C-A | ** | ||||||
6520227-C-A | 6652186-C-A | ** | ||||||
6801137-C-A | 6933096-C-A | ** | ||||||
6910505-C-A | 7042464-C-A | ** | ||||||
6916248-T-C | 7048207-T-C | ** | ||||||
6922513-G-A | 7054472-G-A | ** | ||||||
6971670-G-T | 7103629-G-T | ** | ||||||
7038364-TC-T | 7170323-TC-T | ** | ||||||
7101999-C-A | 7233958-C-A | ** | ||||||
7114667-G-T | 7246626-G-T | ** | ||||||
7131395-C-A | 7263354-C-A | ** | ||||||
7131941-G-C | 7263900-G-C | ** | ||||||
7169857-A-G | 7301816-A-G | ** | ||||||
7179899-G-A | 7311858-G-A | ** | ||||||
7183007-C-A | 7314966-C-A | ** | ||||||
7269870-C-A | 7401829-C-A | ** | ||||||
7306481-A-G | 7438440-A-G | ** | ||||||
7306707-C-A | 7438666-C-A | ** | ||||||
7346554-C-A | 7478513-C-A | ** | ||||||
7362241-C-T | 7494200-C-T | ** | ||||||
7384842-CT-C | 7516801-CT-C | ** | ||||||
7536559-C-A | 7668518-C-A | ** | ||||||
7704785-C-A | 7836744-C-A | ** | ||||||
7990012-C-T | 8121971-C-T | Y46703 | ** | |||||
8072349-C-A | 8204308-C-A | ** | ||||||
8073384-G-T | 8205343-G-T | ** | ||||||
8080104-C-T | 8212063-C-T | ** | ||||||
8138124-G-A | 8270083-G-A | ** | ||||||
8376276-T-C | 8508235-T-C | ** | ||||||
8384753-G-T | 8516712-G-T | ** | ||||||
8407233-C-T | 8539192-C-T | Y47247 | ** | |||||
8481078-AATATAAAAT-A | 8613037-AATATAAAAT-A | ** | ||||||
8481099-A-ACAT | 8613058-A-ACAT | ** | ||||||
8556347-C-G | 8688306-C-G | ** | ||||||
8671998-T-C | 8803957-T-C | ** | ||||||
8709948-G-T | 8841907-G-T | ** | ||||||
8768500-C-A | 8900459-C-A | ** | ||||||
8901077-A-ACC | 9033036-A-ACC | ** | ||||||
8913792-T-C | 9045751-T-C | ** | ||||||
9014254-C-A | 9176645-C-A | FT146114 | ** | |||||
9173558-C-T | 9335949-C-T | ** | ||||||
9461946-G-T | 9624337-G-T | ** | ||||||
9462616-C-A | 9625007-C-A | ** | ||||||
9652108-A-ATT | 9814499-A-ATT | IR3_Prx | ** | |||||
9730508-G-T | 9892899-G-T | IR3_Prx | ** | |||||
9768531-A-G | 9930922-A-G | ** | ||||||
9875001-C-T | 10037392-C-T | ** | ||||||
9889823-G-T | 10052214-G-T | ** | ||||||
10000562-T-C | 10162953-T-C | ** | ||||||
10023006-T-C | 10185397-T-C | ** | ||||||
10630608-C-A | ** | |||||||
10630659-C-A | ** | |||||||
10761227-A-G | ** | |||||||
10777747-G-T | ** | |||||||
10781388-C-A | ** | |||||||
10785288-C-CCCTGGTGATT | ** | |||||||
10803865-C-A | ** | |||||||
10808614-TC-T | ** | |||||||
10808619-TCCAC-T | ** | |||||||
10816616-C-T | ** | |||||||
10850148-C-G | ** | |||||||
10867978-T-C | ** | |||||||
10878293-T-C | ** | |||||||
10881689-C-A | ** | |||||||
10928102-C-A | ** | |||||||
10931851-T-C | ** | |||||||
10988724-C-T | ** | |||||||
10999800-C-A | ** | |||||||
11013373-G-T | ** | |||||||
13196991-C-A | 11041315-C-A | ** | ||||||
13218813-T-G | 11063137-T-G | ** | ||||||
13218915-C-T | 11063239-C-T | FGC58653 | ** | |||||
13234578-C-A | 11078902-C-A | ** | ||||||
13264781-T-C | 11109105-T-C | ** | ||||||
13293503-T-C | 11137827-T-C | ** | ||||||
13315620-A-G | 11159944-A-G | ** | ||||||
13325334-C-A | 11169658-C-A | ** | ||||||
13402086-A-G | 11246410-A-G | ** | ||||||
13423455-C-A | 11267779-C-A | ** | ||||||
13442131-A-AT | 11286455-A-AT | 8×T | ** | |||||
13456500-TC-T | 11300824-TC-T | ** | ||||||
13473820-G-T | 11318144-G-T | ** | ||||||
13473839-C-A | 11318163-C-A | ** | ||||||
13485523-G-A | 11329847-G-A | ** | ||||||
13526503-C-A | 11370827-C-A | ** | ||||||
13583059-C-A | 11427383-C-A | ** | ||||||
13601148-C-G | 11445472-C-G | ** | ||||||
13624244-C-A | 11468568-C-A | ** | ||||||
13624718-T-C | 11469042-T-C | ** | ||||||
11650507-G-T | ** | |||||||
11663205-T-G | ** | |||||||
13854478-G-A | 11733772-G-A | ** | ||||||
13874653-T-C | 11753947-T-C | ** | ||||||
13920558-C-A | 11799852-C-A | ** | ||||||
13920996-G-A | 11800290-G-A | ** | ||||||
13944621-C-G | 11823915-C-G | ** | ||||||
13972824-C-A | 11852118-C-A | ** | ||||||
13989178-C-A | 11868472-C-A | ** | ||||||
14078020-C-A | 11957314-C-A | ** | ||||||
14146716-G-A | 12026010-G-A | ** | ||||||
14195979-C-A | 12075273-C-A | FT96416 | 28×A | ** | ||||
14261545-C-A | 12140839-C-A | ** | ||||||
14448366-C-A | 12327639-C-A | ** | ||||||
14475930-C-A | 12355199-C-A | ** | ||||||
14501174-G-A | 12389379-G-A | ** | ||||||
14509980-C-A | 12398185-C-A | ** | ||||||
14578043-C-T | 12466243-C-T | ** | ||||||
14581025-T-C | 12469225-T-C | ** | ||||||
14624342-T-A | 12512542-T-A | ** | ||||||
14685936-G-A | 12574002-G-A | ** | ||||||
14695907-G-A | 12583973-G-A | ** | ||||||
15060816-G-A | 12948908-G-A | ** | ||||||
15106943-T-G | 12995030-T-G | ** | ||||||
15290228-AT-A | 13178327-AT-A | ** | ||||||
15301772-G-A | 13189871-G-A | ** | ||||||
15379854-C-T | 13267974-C-T | ** | ||||||
15402882-C-A | 13291002-C-A | ** | ||||||
15606764-C-A | 13494884-C-A | ** | ||||||
15712372-C-T | 13600492-C-T | ** | ||||||
15734273-C-A | 13622393-C-A | ** | ||||||
15773441-C-T | 13661561-C-T | ** | ||||||
15832216-CTTTTTTTTT-C | 13720336-CTTTTTTTTT-C | 22×T | ** | |||||
15909234-C-A | 13797354-C-A | ** | ||||||
15921237-G-T | 13809357-G-T | ** | ||||||
16003538-A-G | 13891658-A-G | ** | ||||||
16007903-G-T | 13896023-G-T | ** | ||||||
16008948-G-T | 13897068-G-T | ** | ||||||
16023458-A-G | 13911578-A-G | ** | ||||||
16035632-TA-T | 13923752-TA-T | ** | ||||||
16074225-G-T | 13962345-G-T | ** | ||||||
16177375-C-A | 14065495-C-A | ** | ||||||
16241588-C-A | 14129708-C-A | ** | ||||||
16380036-TGG-T | 14268156-TGG-T | ** | ||||||
16410275-C-A | 14298395-C-A | ** | ||||||
16653161-G-T | 14541281-G-T | ** | ||||||
16719566-C-A | 14607686-C-A | ** | ||||||
16997235-T-A | 14885355-T-A | ** | ||||||
17013231-C-A | 14901351-C-A | ** | ||||||
17014583-G-T | 14902703-G-T | ** | ||||||
17087391-C-A | 14975511-C-A | ** | ||||||
17217221-C-A | 15105341-C-A | ** | ||||||
17229077-C-T | 15117197-C-T | FT394565 | ** | |||||
17434067-C-G | 15322187-C-G | ** | ||||||
17481097-C-A | 15369217-C-A | ** | ||||||
17568479-A-T | 15456599-A-T | ** | ||||||
17600448-T-A | 15488568-T-A | ** | ||||||
17605159-C-A | 15493279-C-A | ** | ||||||
17722474-T-A | 15610594-T-A | ** | ||||||
17779089-C-A | 15667209-C-A | ** | ||||||
17916410-C-A | 15804530-C-A | ** | ||||||
17997330-C-T | 15885450-C-T | FTA26971 | P7_Gap | ** | ||||
18086856-C-A | 15974976-C-A | ** | ||||||
18136203-C-A | 16024323-C-A | ** | ||||||
18136253-G-A | 16024373-G-A | FT127124 | ** | |||||
18165979-C-A | 16054099-C-A | ** | ||||||
18262065-A-G | 16150185-A-G | ** | ||||||
18454885-CTT-C | 16343005-CTT-C | P6_Dst | ** | |||||
18573562-C-A | 16461682-C-A | ** | ||||||
18577168-C-A | 16465288-C-A | ** | ||||||
18593428-C-A | 16481548-C-A | ** | ||||||
18627704-C-A | 16515824-C-A | ** | ||||||
19044492-C-A | 16932612-C-A | ** | ||||||
19104619-G-T | 16992739-G-T | ** | ||||||
19156219-C-G | 17044339-C-G | ** | ||||||
19300362-C-G | 17188482-C-G | ** | ||||||
19373774-C-A | 17261894-C-A | ** | ||||||
19393023-C-T | 17281143-C-T | ** | ||||||
19463390-T-G | 17351510-T-G | ** | ||||||
19465700-G-A | 17353820-G-A | ** | ||||||
19517678-T-G | 17405798-T-G | ** | ||||||
20266132-T-G | 18104246-T-G | P5_Dst | ** | |||||
20266146-G-GT | 18104260-G-GT | P5_Dst | ** | |||||
20333862-G-A | 18171976-G-A | P5_Dst | ** | |||||
21078265-G-A | 18916379-G-A | ** | ||||||
21154516-C-A | 18992630-C-A | ** | ||||||
21187376-GT-G | 19025490-GT-G | ** | ||||||
21201740-G-A | 19039854-G-A | ** | ||||||
21234869-C-A | 19072983-C-A | ** | ||||||
21274692-G-T | 19112806-G-T | ** | ||||||
21392367-C-T | 19230481-C-T | ** | ||||||
21426930-C-A | 19265044-C-A | ** | ||||||
21426986-A-T | 19265100-A-T | ** | ||||||
21448020-A-G | 19286134-A-G | ** | ||||||
21450751-G-A | 19288865-G-A | ** | ||||||
21503133-C-T | 19341247-C-T | ** | ||||||
21555529-T-A | 19393643-T-A | ** | ||||||
21863600-G-T | 19701714-G-T | ** | ||||||
21888170-C-A | 19726284-C-A | ** | ||||||
22085890-G-T | 19924004-G-T | ** | ||||||
22188723-ACACACA-C | 20026837-ACACACA-C | ** | ||||||
22240986-G-T | 20079100-G-T | DYZ19 | ** | |||||
22551222-C-A | 20389336-C-A | ** | ||||||
22592334-T-C | 20430448-T-C | ** | ||||||
22592975-C-A | 20431089-C-A | ** | ||||||
22602381-T-A | 20440495-T-A | ** | ||||||
22780638-G-T | 20618752-G-T | ** | ||||||
22798189-T-C | 20636303-T-C | ** | ||||||
22820229-C-A | 20658343-C-A | ** | ||||||
23007819-T-C | 20845933-T-C | FGC58188 | ** | |||||
23047707-A-G | 20885821-A-G | ** | ||||||
23364360-C-A | 21202474-C-A | ** | ||||||
23510521-C-A | 21348635-C-A | ** | ||||||
23779775-AGTGCTG-A | 21617889-AGTGCTG-A | ** | ||||||
21754424-G-T | ** | |||||||
23952405-A-T | 21806258-A-T | ** | ||||||
24403231-A-T | 22257084-A-T | ** | ||||||
24485914-C-A | 22339767-C-A | ** | ||||||
24513681-C-A | 22367534-C-A | ** | ||||||
24671196-T-G | 22525049-T-G | P3_b2 | ** | |||||
26010349-T-C | 23864202-T-C | P1_Y1 | ** | |||||
26098024-GA-G | 23951877-GA-G | P1_Y1 | ** | |||||
27714177-C-A | 25568030-C-A | P1_Y2 | ** | |||||
28479032-G-T | 26332885-G-T | ** | ||||||
28505350-C-A | 26359203-C-A | ** | ||||||
28531085-T-A | 26384938-T-A | ** | ||||||
28531099-T-G | 26384952-T-G | ** | ||||||
28589413-A-G | 26443266-A-G | ** | ||||||
28665181-C-T | 26519034-C-T | ** | ||||||
28756901-C-A | 26610754-C-A | ** | ||||||
28767798-C-A | 26621651-C-A | ** | ||||||
28774715-C-A | 26628568-C-A | ** | ||||||
19504001-CTT-C | 17392121-CTT-C | 13×T | *** | |||||
4236119-GTA-G | 4368078-GTA-G | *** | ||||||
13450104-CTCCACTCCACCCCATCCCATCCCATTCTATTCCAT-C,CTCCATTCCACCCCATTCCATTCCTTTCCATTCCAT | 11294428-CTCCACTCCACCCCATCCCATCCCATTCTATTCCAT-C,CTCCATTCCACCCCATTCCATTCCTTTCCATTCCAT | *** | ||||||
13466261-T-C | 11310585-T-C | *** | ||||||
58977640-C-A | 56831493-C-A | *** | ||||||
10673892-C-G | *** | |||||||
10673898-C-T | *** | |||||||
10673903-C-G | *** | |||||||
10746934-A-T | *** | |||||||
10942702-C-G | *** | |||||||
10942713-A-T | *** | |||||||
14765676-ATTTTT-A | 12653745-ATTTTT-A | 21×T | *** | |||||
10999885-A-G | *** | |||||||
6347733-AGAAAGAAA-A,AGAAGGAAG | 6479692-AGAAAGAAA-A,AGAAGGAAG | *** | ||||||
18965934-C-A | 16854054-C-A | *** | ||||||
10845756-C-CAGTCT | *** | |||||||
10987250-C-T | *** | |||||||
28661513-ATT-A | 26515366-ATT-A | 13×T | *** | |||||
10892592-C-A | *** | |||||||
21202550-C-A | 19040664-C-A | *** | ||||||
10987246-T-A,C | *** | |||||||
10987213-A-G | *** | |||||||
10987236-C-T | *** | |||||||
10987237-C-T | *** | |||||||
10892577-C-A | *** | |||||||
10892568-C-CACTAA | *** | |||||||
10682513-A-T | *** | |||||||
10821931-C-G | *** | |||||||
10821966-C-G | *** | |||||||
11668887-C-A | *** | |||||||
10845741-C-T | *** | |||||||
13466262-GC-G | 11310586-GC-G | *** | ||||||
13850182-G-T | 11729476-G-T | *** | ||||||
8811075-CT-C | 8943034-CT-C | 9×T | *** | |||||
10934756-T-A | *** | |||||||
3804732-CAAAAAA-C | 3936691-CAAAAAA-C | 29×A | *** | |||||
13487901-C-CG | 11332225-C-CG | *** | ||||||
10746964-A-G | *** | |||||||
7861431-C-A | 7993390-C-A | *** | ||||||
56841044-C-A | *** | |||||||
22228158-G-T | 20066272-G-T | DYZ19 | *** | |||||
7474374-AAGAGAG-A,AAG | 7606333-AAGAGAG-A,AAG | IR1_L | 21×AG | *** | ||||
8080266-G-T | 8212225-G-T | *** | ||||||
58979817-C-T | 56833670-C-T | *** | ||||||
56847485-G-T | *** | |||||||
14530921-C-A | 12419122-C-A | *** | ||||||
22032464-C-A | 19870578-C-A | *** | ||||||
10790984-C-A | *** | |||||||
3272756-C-A | 3404715-C-A | *** | ||||||
4160001-C-A | 4291960-C-A | *** | ||||||
6666473-C-A | 6798432-C-A | *** | ||||||
7615252-G-T | 7747211-G-T | *** | ||||||
8384931-G-T | 8516890-G-T | *** | ||||||
8748872-C-A | 8880831-C-A | *** | ||||||
10005891-C-A | 10168282-C-A | *** | ||||||
10666903-C-A | *** | |||||||
10677877-G-T | *** | |||||||
10746905-TTCAAC-T,TTCAAATGCAC | *** | |||||||
10801686-C-CCACAT | *** | |||||||
13466244-G-A | 11310568-G-A | *** | ||||||
13466263-C-G | 11310587-C-G | *** | ||||||
13485619-C-A,G | 11329943-C-A,G | *** | ||||||
13987319-G-A | 11866613-G-A | *** | ||||||
14174740-C-A | 12054034-C-A | *** | ||||||
16029088-G-A | 13917208-G-A | *** | ||||||
16057413-C-A | 13945533-C-A | *** | ||||||
16710410-G-T | 14598530-G-T | *** | ||||||
16944509-A-T | 14832629-A-T | *** | ||||||
18728935-C-A | 16617055-C-A | *** | ||||||
19372327-T-TAG | 17260447-T-TAG | *** | ||||||
19377439-G-GAAGA,GAAGAAAGA | 17265559-G-GAAGA,GAAGAAAGA | 15×AAGA | *** | |||||
20213005-TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC-T | 18051119-TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC-T | P5_Dst | 26×TTC | *** | ||||
22346360-C-G,T | 20184474-C-G,T | DYZ19 | *** | |||||
23439999-G-T | 21278113-G-T | *** | ||||||
23630160-C-A | 21468274-C-A | *** | ||||||
56838850-C-A | *** | |||||||
56850749-G-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.