Tree Position

R-P312/S116 > Z40481 > ZZ11 > DF27/S250 > Z195/S355 > Z272 > S450 > Z295/S1217 > S25783 > CTS4065 > 15548847GACAC-G > FGC15710 > CTS10029 > FGC15730 > FGC15731 > FGC15726 > FGC15733

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
G19LI
FTDNA
195834
8049306-G-T 8181265-G-T FGC15725 YY++
3377315-G-C 3509274-G-C FGC15717 +
21529494-A-G 19367608-A-G FGC15744 YY++
21298986-C-A 19137100-C-A FGC15743 YY++
3851380-A-G 3983339-A-G FGC15719 +
3684190-G-A 3816149-G-A FGC15718 +
22946163-G-A 20784277-G-A FGC15745 YY++
23104678-C-A 20942792-C-A FGC15746 Y+
23130136-C-A 20968250-C-A FGC15747 YY++
13676073-G-T 11520397-G-T FGC15729 +
4832009-T-G 4963968-T-G FGC15721 +
17804987-T-C 15693107-T-C FGC15741 YY++
17657782-C-T 15545902-C-T FGC15740 YY++
17505018-G-A 15393138-G-A FGC15739 Y+
17357757-G-C 15245877-G-C FGC15738 YY++
7681235-GT-G 7813194-GT-G ++
16547345-C-A 14435465-C-A FGC15736 YY++
15939043-A-T 13827163-A-T FGC15734 YY++
4726349-G-A 4858308-G-A FGC15720 +
2952791-G-A 3084750-G-A FGC15715 +
9070056-C-T 9232447-C-T FGC15728 Y+
5207335-C-T 5339294-C-T FGC15723 +
8704232-G-T 8836191-G-T FGC15727 YY+
6990455-T-A 7122414-T-A FGC15724 YY++
5036054-A-G 5168013-A-G FGC15722 *
3225930-C-T 3357889-C-T FGC15716 *
15013032-C-A 12901120-C-A **
25566325-T-C 23420178-T-C P1_gr1 **
15491939-GTGTATA-G 13380059-GTGTATA-G **
17733553-TAATAAATA-T 15621673-TAATAAATA-T 11×AATA**
21551885-ATATG-A 19389999-ATATG-A 4×TATG**
59003750-TA-T 56857603-TA-T 11×A**
22473306-G-C 20311420-G-C DYZ19 **
21556919-C-CTTTTTTTTTTTTTT 19395033-C-CTTTTTTTTTTTTTT 23×T**
19479688-A-AGTGT 17367808-A-AGTGT 20×GT**
22205320-T-TA 20043434-T-TA 9×A**
15013031-G-A 12901119-G-A **
22459741-G-T 20297855-G-T DYZ19 ****
58831111-TACACTCCA-T 56759751-ATGGAGTGT-A **
27626724-G-A 25480577-G-A P1_Y2 ***
26563148-A-T 24417001-A-T P1_g2 ***
58832603-C-T 56758268-G-A ***
58832594-T-A 56758277-A-T ***
58830838-C-T 56760033-G-A ***
27195434-T-G 25049287-T-G P1_g3 ***
58826839-C-T 56764032-G-A ***
58825356-G-T 56765515-C-A ***
28489420-C-T 26343273-C-T ***
27398425-A-G 25252278-A-G P1_g3 ***
27626723-T-A 25480576-T-A P1_Y2 ***
27626757-C-T 25480610-C-T P1_Y2 ***
27626729-T-A 25480582-T-A P1_Y2 ***
27917272-C-T 25771125-C-T P1_Y2 ***
27917280-G-T 25771133-G-T P1_Y2 ***
27626758-G-T 25480611-G-T P1_Y2 ***
27917274-A-T 25771127-A-T P1_Y2 ***
27626760-G-A 25480613-G-A P1_Y2 ***
27917281-G-T 25771134-G-T P1_Y2 ***
28112811-G-T 25966664-G-T P1_Y2 ***
28112819-G-A 25966672-G-A P1_Y2 ***
27626770-G-T 25480623-G-T P1_Y2 ***
27626771-G-T 25480624-G-T P1_Y2 ***
27873324-C-T 25727177-C-T P1_Y2 20×T***
27917247-A-T 25771100-A-T P1_Y2 ***
27917273-A-T 25771126-A-T P1_Y2 ***
27917275-A-T 25771128-A-T P1_Y2 ***
26469843-G-T 24323696-G-T P1_Y1 ***
26563145-A-T 24416998-A-T P1_g2 ***
22364462-G-C 20202576-G-C DYZ19 ***
22499933-A-C 20338047-A-C DYZ19 ***
22499545-C-A 20337659-C-A DYZ19 ***
22496017-G-A 20334131-G-A DYZ19 ***
22426328-A-C 20264442-A-C DYZ19 ***
22426317-T-A 20264431-T-A DYZ19 ***
22421067-C-G 20259181-C-G DYZ19 ***
22421028-T-A 20259142-T-A DYZ19 ***
22366432-G-T 20204546-G-T DYZ19 ***
22361084-C-T 20199198-C-T DYZ19 ***
22500514-A-T 20338628-A-T DYZ19 ***
22359779-A-T 20197893-A-T DYZ19 ***
22355111-G-T 20193225-G-T DYZ19 ***
22352878-T-A 20190992-T-A DYZ19 ***
22352875-A-G 20190989-A-G DYZ19 ***
22351196-T-A 20189310-T-A DYZ19 ***
22344117-G-T 20182231-G-T DYZ19 ***
22343137-T-G 20181251-T-G DYZ19 ***
22343136-T-C 20181250-T-C DYZ19 ***
22500180-A-T 20338294-A-T DYZ19 ***
22504826-T-A 20342940-T-A DYZ19 ***
26563131-A-T 24416984-A-T P1_g2 ***
25854882-A-G 23708735-A-G P1_Y1 ***
26563121-A-T 24416974-A-T P1_g2 ***
26484989-C-T 24338842-C-T P1_Y1 ***
58838388-C-G 56752483-G-C ***
26324913-C-A 24178766-C-A P1_Y1 ***
26276384-G-T 24130237-G-T P1_Y1 ***
26262207-G-T 24116060-G-T P1_Y1 ***
25866083-C-T 23719936-C-T P1_Y1 ***
25855068-C-T 23708921-C-T P1_Y1 ***
25854864-C-A 23708717-C-A P1_Y1 ***
24152855-A-T 22006708-A-T P3_b1 ******
25674268-T-G 23528121-T-G P1_b3 ***
25674253-A-T 23528106-A-T P1_b3 ***
25674249-C-G 23528102-C-G P1_b3 ***
25674240-C-A 23528093-C-A P1_b3 ***
24608194-T-G 22462047-T-G P3_t2 ***
24608186-G-A 22462039-G-A P3_t2 ***
24343465-T-G 22197318-T-G P3_t1 ***
24323497-G-T 22177350-G-T P3_t1 ***
58833789-T-A 56757082-A-T ***
20013372-T-TA 17901492-T-TA P5_Prx 8×A***
58843679-T-A 56747192-A-T ***
22234332-CT-AG 20072446-CT-AG DYZ19 ***
22369675-G-GA 20207789-G-GA DYZ19 ***
22367119-AT-GA 20205233-AT-GA DYZ19 ***
22364840-CTTACTGT-TTTTGTGG 20202954-CTTACTGT-TTTTGTGG DYZ19 ***
22361071-CTAAAC-AGAGT 20199185-CTAAAC-AGAGT DYZ19 ***
22351196-TT-AG 20189310-TT-AG DYZ19 ***
22332674-ACTT-TCGG 20170788-ACTT-TCGG DYZ19 ***
22292751-AG-GA 20130865-AG-GA DYZ19 ***
22276466-ATAA-TTAC 20114580-ATAA-TTAC DYZ19 ***
22023684-G-GTTTTTTT 19861798-G-GTTTTTTT 17×T***
22496026-CT-AC 20334140-CT-AC DYZ19 ***
21853677-C-CAAAAAAAA 19691791-C-CAAAAAAAA 43×A***
21306590-C-CAAAAAAAA 19144704-C-CAAAAAAAA 27×A***
20574157-TC-CT 18412271-TC-CT P5_Dst ***
20574139-CCTGGGCCTAC-GCTGAGCTCAT 18412253-CCTGGGCCTAC-GCTGAGCTCAT P5_Dst ***
20574131-CCA-GTGG 18412245-CCA-GTGG P5_Dst ***
18593579-A-ATGTG 16481699-A-ATGTG 14×TG***
18255888-T-TAAAAA 16144008-T-TAAAAA 22×A***
17942103-C-CT 15830223-C-CT 11×T***
22496008-CG-GA 20334122-CG-GA DYZ19 ***
22498796-TT-GA 20336910-TT-GA DYZ19 ***
16344416-C-CTTCTTA 14232536-C-CTTCTTA ***
58863512-TCT-GCC 56727357-AGA-GGC ***
22422369-C-T 20260483-C-T DYZ19 ***
22286816-A-T 20124930-A-T DYZ19 ***
23495846-C-CT 21333960-C-CT 14×T***
26124427-C-CAAAAAAAAAAAAAAA 23978280-C-CAAAAAAAAAAAAAAA P1_Y1 31×A***
21553403-C-CTTTTTTTTTTTT 19391517-C-CTTTTTTTTTTTT 31×T***
59007959-C-CAAAAAA 56861812-C-CAAAAAA 26×A***
58907251-ATCA-TTCC 56683617-TGAT-GGAA ***
58890513-TTCCATTTT-GTCCGTTTC 56700350-AAAATGGAA-GAAACGGAC ***
58847223-TCCATTC-GCCAAAT 56743642-GAATGGA-ATTTGGC ***
24115209-CAA-AAT 21969062-CAA-AAT P3_b1 ***
58847203-TCCTTTCC-GCCATTCG 56743661-GGAAAGGA-CGAATGGC ***
58843671-TTTCCGTTTCA-AGTCAATGATT 56747190-TGAAACGGAAA-AATCATTGACT ***
58840405-CA-TAG 56750465-TG-CTA ***
58823335-T-TC 56767534-T-TG ***
27902194-AGTC-TGTT 25756047-AGTC-TGTT P1_Y2 ***
26386480-C-CAAAAAAAAAAAAAAA 24240333-C-CAAAAAAAAAAAAAAA P1_Y1 20×A***
25676090-AG-A 23529943-AG-A P1_b3 ***
24686428-C-CTTT 22540281-C-CTTT P3_b2 23×T***
24508205-C-CTTTTTT 22362058-C-CTTTTTT 22×T***
16785733-AAAA-CAAC 14673853-AAAA-CAAC ***
15882074-C-CACAAAAA 13770194-C-CACAAAAA 25×A***
58843741-T-G 56747130-A-C ***
58876424-C-A 56714447-G-T ***
20842560-AAG-GAA 18680674-AAG-GAA P4_Dst ***
19377288-AAGGG-A 17265408-AAGGG-A 5×AGGG***
18818389-G-GA 16706509-G-GA 17×A***
58913221-T-G 56677650-A-C ***
58913108-C-A 56677763-G-T ***
58909165-G-C 56681706-C-G ***
58884736-T-A 56706135-A-T ***
58884715-C-T 56706156-G-A ***
58854233-T-C 56736638-A-G ***
22311598-TA-GT 20149712-TA-GT DYZ19 ***
58848412-T-G 56742459-A-C ***
22341815-T-C 20179929-T-C DYZ19 ***
58848404-C-T 56742467-G-A ***
58847052-T-A 56743819-A-T ***
58847042-G-A 56743829-C-T ***
58844248-T-C 56746623-A-G ***
58844246-A-C 56746625-T-G ***
58844245-G-T 56746626-C-A ***
28457748-CA-C 26311601-CA-C 21×A***
3957616-T-TA 4089575-T-TA 12×A***
15013031-GC-AA 12901119-GC-AA ***
13110958-AA-TG 10600444-AA-TG ***
14746176-C-CAA 12634245-C-CAA 19×A***
14738413-CTTTTT-C 12626481-CTTTTT-C 17×T***
13898754-G-GTTTATTTATTTTTTT 11778048-G-GTTTATTTATTTTTTT 26×T***
13484502-GGGT-CAGC 11328826-GGGT-CAGC ***
13484477-AGCA-GGCC 11328801-AGCA-GGCC ***
13414797-A-ATCTTTTT 11259121-A-ATCTTTTT 20×T***
13267597-C-CAAAAAAA 11111921-C-CAAAAAAA 11×A***
13140070-ACTCGAGTGCGTGTGATTCCATTAAAT-A 10629556-ACTCGAGTGCGTGTGATTCCATTAAAT-A ***
13110938-AAAGTT-GGAGAG 10600424-AAAGTT-GGAGAG ***
5147441-CAAAAAAAAAA-C 5279400-CAAAAAAAAAA-C 30×A***
9218518-GTGTTTGTG-TTGAGTT 9380909-GTGTTTGTG-TTGAGTT ***
8901046-TACAC-T 9033005-TACAC-T 15×AC***
8575956-A-ATTTTTTT 8707915-A-ATTTTTTT 28×T***
8016938-C-CTTTTTTT 8148897-C-CTTTTTTT 25×T***
7009187-CTTTTT-C 7141146-CTTTTT-C 19×T***
6201142-TCAGAAGGCAAGA-T 6333101-TCAGAAGGCAAGA-T IR3_Dst ***
6201138-GC-G 6333097-GC-G IR3_Dst ***
5937238-CTCTC-A 6069197-CTCTC-A ***
5574077-CTTT-C 5706036-CTTT-C 19×T***
22342624-A-T 20180738-A-T DYZ19 ***
22289506-G-A 20127620-G-A DYZ19 ***
22341659-G-C 20179773-G-C DYZ19 ***
58832604-A-T 56758267-T-A ***
22273690-A-G 20111804-A-G DYZ19 ***
22364862-A-G 20202976-A-G DYZ19 ***
22480697-A-T 20318811-A-T DYZ19 ***
58913273-T-C 56677598-A-G ***
58840403-A-T 56750468-T-A ***
27398510-C-CAAAAAAAAA 25252363-C-CAAAAAAAAA P1_g3 23×A***
20025476-T-C 17913596-T-C P5_Prx ***
58876441-C-A 56714430-G-T ***
58832602-C-T 56758269-G-A ***
9303941-G-T 9466332-G-T ***
58874465-AG-TAT 56716405-CT-ATA ***
58854277-C-T 56736594-G-A ***
22341680-C-T 20179794-C-T DYZ19 ***
22341648-G-T 20179762-G-T DYZ19 ***
19517642-C-A 17405762-C-A ***
22268290-CTTAGTGG-ATTGGTGT 20106404-CTTAGTGG-ATTGGTGT DYZ19 ***
13470244-GT-G 11314568-GT-G ***
22341694-TCAC-GCAG 20179808-TCAC-GCAG DYZ19 ***
22273685-C-A 20111799-C-A DYZ19 ***
13726432-G-A 11570756-G-A ***
22344726-G-T 20182840-G-T DYZ19 ***
24207919-C-G 22061772-C-G P3_b1 ***
6201134-G-T 6333093-G-T IR3_Dst ***
5009286-T-C 5141245-T-C ***
3634504-A-T 3766463-A-T ***
22332673-C-A 20170787-C-A DYZ19 ***
22341847-T-G 20179961-T-G DYZ19 ***
13464176-C-A 11308500-C-A ***
22353387-A-C 20191501-A-C DYZ19 ***
22365762-T-G 20203876-T-G DYZ19 ***
17081250-T-A 14969370-T-A ***
58847060-A-C 56743811-T-G ***
58843619-CGTTTCG-GGAGTCA 56747246-CGAAACG-TGACTCC ***
58847090-A-G 56743781-T-C ***
22365765-ACA-CCT 20203879-ACA-CCT DYZ19 ***
58909144-C-G 56681727-G-C ***
16784428-G-A 14672548-G-A 10×A***
58859164-A-T 56731707-T-A ***
58859162-G-C 56731709-C-G ***
58847081-G-A 56743790-C-T ***
5937208-ATCTC-A 6069167-ATCTC-A 17×TC***
58913247-CG-C 56677622-TC-T ***
6671335-T-A 6803294-T-A ***
58843619-C-G 56747252-G-C ***
13475702-C-T 11320026-C-T ***
27902194-A-T 25756047-A-T P1_Y2 ***
22341618-G-T 20179732-G-T DYZ19 ***
23801733-C-CAAAAAAA 21639847-C-CAAAAAAA 31×A***
22421783-GC-CT 20259897-GC-CT DYZ19 ***
15336019-C-CAAAAAAA 13224137-C-CAAAAAAA 30×A***
6089764-G-GTTTTT 6221723-G-GTTTTT 31×T***
58843621-T-A 56747250-A-T ***
27902197-C-T 25756050-C-T P1_Y2 34×T***
19656586-G-T 17544706-G-T P5_Prx ***
27902189-C-T 25756042-C-T P1_Y2 ***
22496212-A-G 20334326-A-G DYZ19 ***
16784423-G-A 14672543-G-A ***
58843625-G-A 56747246-C-T ***
22496198-T-G 20334312-T-G DYZ19 ***
27918646-GT-G 25772499-GT-G P1_Y2 11×T***
28793513-A-G 26647366-A-G ***
58826833-C-T 56764038-G-A 9×CCATT***
13114407-G-A 10603893-G-A ***
20531661-G-A 18369775-G-A P5_Dst ***
22491770-C-T 20329884-C-T DYZ19 ***
13111839-G-A 10601325-G-A ***
58913266-A-T 56677605-T-A ***
22341863-A-C 20179977-A-C DYZ19 ***
22273689-T-A 20111803-T-A DYZ19 ***
13203970-CCACCCCGCCTC-TAAT 11048294-CCACCCCGCCTC-TAAT ***
27617980-C-CAAAAAAA 25471833-C-CAAAAAAA P1_Y2 29×A***
22309319-CT-GA 20147433-CT-GA DYZ19 ***
22309281-GCTCCA-TCTGCG 20147395-GCTCCA-TCTGCG DYZ19 ***
27417788-A-C 25271641-A-C P1_g3 ***
3086544-CAA-C 3218503-CAA-C 18×A***
20531664-T-G 18369778-T-G P5_Dst ***
58820555-G-C 56770316-C-G ***
58866449-A-G 56724422-T-C ***
19937284-G-GCCCC 17825404-G-GCCCC P5_Prx 13×C***
20531707-G-A 18369821-G-A P5_Dst ***
20531695-C-T 18369809-C-T P5_Dst ***
20531681-A-C 18369795-A-C P5_Dst ***
20531677-C-A 18369791-C-A P5_Dst ***
20531675-T-C 18369789-T-C P5_Dst ***
6209784-A-T 6341743-A-T IR3_Dst ***
9191109-A-T 9353500-A-T ***
22341643-G-C 20179757-G-C DYZ19 ***
20233155-A-T 18071269-A-T P5_Dst ***
20842571-A-G 18680685-A-G P4_Dst ***
20435194-G-A 18273308-G-A P5_Dst ***
20264270-A-T 18102384-A-T P5_Dst ***
20264246-C-T 18102360-C-T P5_Dst ***
20264245-C-T 18102359-C-T P5_Dst ***
20264244-A-T 18102358-A-T P5_Dst ***
20233162-T-A 18071276-T-A P5_Dst ***
20233158-T-A 18071272-T-A P5_Dst ***
20233154-A-T 18071268-A-T P5_Dst ***
22234708-C-G 20072822-C-G DYZ19 ***
20132282-C-A 18020402-C-A P5_Dst ***
19858704-C-A 17746824-C-A P5_Prx ***
19858700-A-T 17746820-A-T P5_Prx ***
19858669-A-T 17746789-A-T P5_Prx ***
19858668-C-T 17746788-C-T P5_Prx ***
19833480-G-A 17721600-G-A P5_Prx ***
19816804-C-T 17704924-C-T P5_Prx ***
19816800-A-T 17704920-A-T P5_Prx ***
20955090-A-T 18793204-A-T P4_Dst ***
22234710-C-T 20072824-C-T DYZ19 ***
19386620-A-T 17274740-A-T ***
22315215-C-T 20153329-C-T DYZ19 ***
22332677-T-G 20170791-T-G DYZ19 ***
22332676-T-G 20170790-T-G DYZ19 ***
22332674-A-T 20170788-A-T DYZ19 ***
22330060-G-A 20168174-G-A DYZ19 ***
22329671-G-A 20167785-G-A DYZ19 ***
22322612-G-T 20160726-G-T DYZ19 ***
22321096-T-A 20159210-T-A DYZ19 ***
22317729-A-G 20155843-A-G DYZ19 ***
22311593-C-G 20149707-C-G DYZ19 ***
22234713-T-G 20072827-T-G DYZ19 ***
22311552-C-T 20149666-C-T DYZ19 ***
58912416-A-T 56678455-T-A ***
22268259-T-A 20106373-T-A DYZ19 ***
22251587-C-A 20089701-C-A DYZ19 ***
22251516-T-A 20089630-T-A DYZ19 ***
22250250-C-A 20088364-C-A DYZ19 ***
22248840-C-T 20086954-C-T DYZ19 ***
22248764-G-T 20086878-G-T DYZ19 ***
19775683-C-A 17663803-C-A P5_Prx ***
19176144-G-T 17064264-G-T ***
9342737-C-G 9505128-C-G ***
10084304-G-A 10246695-G-A ***
13109526-C-A 10599012-C-A ***
13109515-T-C 10599001-T-C ***
13109505-T-A 10598991-T-A ***
10095035-G-T 10257426-G-T ***
10095023-A-T 10257414-A-T ***
10094985-T-C 10257376-T-C ***
10094970-G-A 10257361-G-A ***
10094969-G-C 10257360-G-C ***
10084031-T-A 10246422-T-A ***
13114355-G-T 10603841-G-T ***
9585399-G-A 9747790-G-A IR3_Prx ***
9585388-A-T 9747779-A-T IR3_Prx ***
9363322-C-A 9525713-C-A ***
9345502-A-T 9507893-A-T ***
9345497-G-C 9507888-G-C ***
9345055-C-G 9507446-C-G ***
9342986-G-T 9505377-G-T ***
9342739-G-T 9505130-G-T ***
13110965-T-A 10600451-T-A ***
13114393-C-G 10603879-C-G ***
18443675-T-A 16331795-T-A P6_Dst ***
13724587-G-C 11568911-G-C ***
17835066-A-G 15723186-A-G ***
17323693-A-G 15211813-A-G ***
17323685-G-T 15211805-G-T ***
15675458-C-T 13563578-C-T ***
13726549-C-G 11570873-C-G ***
13726494-G-A 11570818-G-A ***
13726487-C-A 11570811-C-A ***
13726438-A-T 11570762-A-T ***
13724578-C-A 11568902-C-A ***
13114401-G-C 10603887-G-C ***
13724573-G-T 11568897-G-T ***
13724572-G-T 11568896-G-T ***
13724570-A-G 11568894-A-G ***
13724565-T-A 11568889-T-A ***
13475568-G-T 11319892-G-T ***
13467385-T-A 11311709-T-A ***
13464179-A-C 11308503-A-C ***
13463452-G-T 11307776-G-T ***
25206080-A-C 23059933-A-C g1 ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Haplotype Progression

The data below reveals the progression of changes in the haplotype. The bottom row is the haplotype for this man and above him are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are very much a work in progress, and any suggested modifications are appreciated. I think we can use our vast collection of haplotype data to refine these haplotypes. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

DYS393
DYS390
DYS19
DYS391
DYS385
DYS426
DYS388
DYS439
DYS389i
DYS392
DYS389ii
DYS458
DYS459
DYS455
DYS454
DYS447
DYS437
DYS448
DYS449
DYS464
DYS460
Y-GATA-H4
YCAII
DYS456
DYS607
DYS576
DYS570
CDY
DYS442
DYS438
DYS531
DYS578
DYF395S1
DYS590
DYS537
DYS641
DYS472
DYF406S1
DYS511
DYS425
DYS413
DYS557
DYS594
DYS436
DYS490
DYS534
DYS450
DYS444
DYS481
DYS520
DYS446
DYS617
DYS568
DYS487
DYS572
DYS640
DYS492
DYS565
DYS710
DYS485
DYS632
DYS495
DYS540
DYS714
DYS716
DYS717
DYS505
DYS556
DYS549
DYS589
DYS522
DYS494
DYS533
DYS636
DYS575
DYS638
DYS462
DYS452
DYS445
Y-GATA-A10
DYS463
DYS441
Y-GGAAT-1B07
DYS525
DYS712
DYS593
DYS650
DYS532
DYS715
DYS504
DYS513
DYS561
DYS552
DYS726
DYS635
DYS587
DYS643
DYS497
DYS510
DYS434
DYS461
DYS435
P312/S1161324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123315916122626191211131210912121011113012132413101020151913241712152412231810141791211
Hulan1424141110-11121212131429189-1011112314182815-15-16-17111119-231515181837-38121211915-1681010812101223-23161012121581423201312111310111212341591612262619121114121091311101111301112241381220151714231713152412231711151691211

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: G19LI*16000000100000008300000
Kit: 1958341056909076774437741248
Used in age calculations16000000100000008300000
Counts of SNPs1413
Variant counts last updated 2017-11-05 23:05:13.

* BED data not available. Using default values.


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