Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > Z39589 > DF49/S474 > Z2980 > Z2976 > DF23 > Z2961 > M222 > DF106 > DF104 > DF105 > FGC23742

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFGC
SUV4X
23995013-A-G 21848866-A-G FGC31528 +
16846575-T-C 14734695-T-C FGC31527 YY+
5350631-A-G 5482590-A-G FGC31520 +
6635711-T-G 6767670-T-G FGC31521 YY+
9420519-T-C 9582910-T-C FGC31523 YY+
14111614-G-A 11990908-G-A FGC31524 Y+
15618654-C-T 13506774-C-T FGC31525 YY+
15942956-G-A 13831076-G-A FGC31526 YY+
16001145-CT-C 13889265-CT-C +
24000312-G-A 21854165-G-A FGC31529 Y+
4236291-T-A 4368250-T-A FGC31519 *
7155787-A-G 7287746-A-G FGC31522 Y*
13601424-C-T 11445748-C-T **
13567082-C-T 11411406-C-T **
9459384-T-TTGTG 9621775-T-TTGTG 18×TG**
2888870-C-CAAAAAAA 3020829-C-CAAAAAAA 32×A**
19309422-CATATATATATATATATATAT-C 17197542-CATATATATATATATATATAT-C 19×AT**
19126436-C-CAAAAAA 17014556-C-CAAAAAA 25×A**
18709995-G-GT 16598115-G-GT **
13257264-C-T 11101588-C-T **
13139020-T-TCAATCC 10628506-T-TCAATCC **
13258629-G-A 11102953-G-A **
18174668-G-GTA 16062788-G-GTA **
13565341-T-G 11409665-T-G **
6153711-T-G 6285670-T-G IR3_Dst **
9200884-G-A 9363275-G-A **
27127501-GCTTC-G 24981354-GCTTC-G P1_g3 10×CTTC**
13257201-T-C 11101525-T-C **
13257193-C-G 11101517-C-G **
5919330-C-CT 6051289-C-CT 10×T**
13567070-G-C 11411394-G-C **
26228689-C-CTTTTTTTTTT 24082542-C-CTTTTTTTTTT P1_Y1 27×T**
27461323-A-G 25315176-A-G P1_Y2 **
28245422-CTTT-C 26099275-CTTT-C P1_b4 15×T**
16401967-G-GTA 14290087-G-GTA **
27461936-T-TTG 25315789-T-TTG P1_Y2 27×TG**
22236571-T-A 20074685-T-A DYZ19 **
58874429-G-C 56716442-C-G ***
58877007-T-C 56713864-A-G ***
58877012-T-C 56713859-A-G ***
58915526-G-C 56675345-C-G ***
58872348-T-G 56718523-A-C ***
58915528-A-T 56675343-T-A ***
24611464-G-A 22465317-G-A P3_t2 ***
58875765-G-T 56715106-C-A ***
3086544-CA-C 3218503-CA-C 18×A***
24562497-A-G 22416350-A-G P3_t2 ***
58910429-C-A 56680442-G-T ***
58915530-C-G 56675341-G-C ***
58915538-T-G 56675333-A-C ***
58915545-T-C 56675326-A-G ***
13453318-G-GCATTC 11297642-G-GCATTC 12×CATTC***
58915523-T-G 56675348-A-C ***
58909962-G-C 56680909-C-G ***
58910413-T-G 56680458-A-C ***
58868763-G-A 56722108-C-T ***
58893196-T-A 56697675-A-T ***
58889810-C-A 56701061-G-T ***
58889742-T-G 56701129-A-C ***
58907234-A-C 56683637-T-G ***
58884141-T-C 56706730-A-G ***
58908622-T-C 56682249-A-G ***
58882833-G-C 56708038-C-G ***
58909992-T-C 56680879-A-G ***
58882809-G-A 56708062-C-T ***
58882773-C-G 56708098-G-C ***
58909253-G-T 56681618-C-A ***
58881441-G-T 56709430-C-A ***
58881407-T-C 56709464-A-G ***
58877130-G-C 56713741-C-G ***
58897988-C-G 56692883-G-C ***
58872295-T-C 56718576-A-G ***
26207974-C-T 24061827-C-T P1_Y1 ***
58866939-C-T 56723932-G-A ***
27816424-C-A 25670277-C-A P1_Y2 ***
28060183-C-T 25914036-C-T P1_Y2 ***
28060181-G-A 25914034-G-A P1_Y2 ***
25877649-A-G 23731502-A-G P1_Y1 ***
28060180-T-C 25914033-T-C P1_Y2 ***
28060174-C-T 25914027-C-T P1_Y2 ***
28060160-G-C 25914013-G-C P1_Y2 ***
28060159-A-C 25914012-A-C P1_Y2 ***
28058679-C-T 25912532-C-T P1_Y2 ***
27921877-A-T 25775730-A-T P1_Y2 ***
27816423-C-T 25670276-C-T P1_Y2 ***
25323010-A-C 23176863-A-C P2_r1 ***
27816419-A-C 25670272-A-C P1_Y2 ***
27575689-T-C 25429542-T-C P1_Y2 ***
27409247-G-A 25263100-G-A P1_g3 ***
27337028-C-A 25190881-C-A P1_g3 ***
27306771-T-C 25160624-T-C P1_g3 ***
27245043-C-T 25098896-C-T P1_g3 ***
26495890-T-A 24349743-T-A P1_Y1 ***
26378559-A-G 24232412-A-G P1_Y1 ***
26349672-T-G 24203525-T-G P1_Y1 ***
26311661-C-T 24165514-C-T P1_Y1 ***
25877025-A-G 23730878-A-G P1_Y1 ***
24731902-T-G 22585755-T-G P3_b2 ***
58866931-T-A 56723940-A-T ***
58847888-A-T 56742983-T-A ***
58861560-G-C 56729311-C-G ***
58859740-C-A 56731131-G-T ***
58859677-C-T 56731194-G-A ***
58853629-G-A 56737242-C-T ***
58849337-T-C 56741534-A-G ***
58849323-T-A 56741548-A-T ***
16772452-TC-T 14660572-TC-T ***
58849290-A-C 56741581-T-G ***
58849288-G-C 56741583-C-G ***
58847179-C-G 56743692-G-C ***
58819503-T-C 56771368-A-G ***
58847070-G-C 56743801-C-G ***
58846285-G-C 56744586-C-G ***
58842254-G-C 56748617-C-G ***
58840397-G-A 56750474-C-T ***
58829772-G-T 56761099-C-A ***
58828984-G-T 56761887-C-A ***
58828784-C-A 56762087-G-T ***
58828105-A-T 56762766-T-A ***
58823054-T-C 56767817-A-G ***
58823041-C-G 56767830-G-C ***
23495775-A-AAT 21333889-A-AAT 9×AT***
8644547-C-CTA 8776506-C-CTA 8×TA***
22267245-TT-AG 20105359-TT-AG DYZ19 ***
21553403-C-CTTTTTTTT 19391517-C-CTTTTTTTT 31×T***
25567109-TG-CA 23420962-TG-CA P1_gr1 ***
22495764-CTTGC-GTTG 20333878-CTTGC-GTTG DYZ19 ***
22481716-ATTG-TTTC 20319830-ATTG-TTTC DYZ19 ***
22446152-AC-A 20284266-AC-A DYZ19 ***
22421679-CCAGTCC-GCAGACG 20259793-CCAGTCC-GCAGACG DYZ19 ***
22361381-AGTTTTT-CGTTTG 20199495-AGTTTTT-CGTTTG DYZ19 ***
22352870-ACA-CCT 20190984-ACA-CCT DYZ19 ***
22309406-ACTGT-GCTGC 20147520-ACTGT-GCTGC DYZ19 ***
22273612-ATTAACAG-CTTCAGAT 20111726-ATTAACAG-CTTCAGAT DYZ19 ***
22256848-G-GTGCT 20094962-G-GTGCT DYZ19 ***
21133556-CA-C 18971670-CA-C 23×A***
26349672-TAA-GAAG 24203525-TAA-GAAG P1_Y1 ***
20655024-GTG-A 18493138-GTG-A P4_Prx ***
19943369-TACCT-CACCA 17831489-TACCT-CACCA P5_Prx ***
19943357-CAT-GAC 17831477-CAT-GAC P5_Prx ***
19716474-AGTAAG-GCAAC 17604594-AGTAAG-GCAAC P5_Prx ***
19716455-CA-TT 17604575-CA-TT P5_Prx ***
18401199-C-CA 16289319-C-CA P6_Gap 30×A***
18353526-TATGGTGTGAGCTTGT-AAAAAG 16241646-TATGGTGTGAGCTTGT-AAAAAG P6_Prx ***
18353513-GCTGGGGGAGC-G 16241633-GCTGGGGGAGC-G P6_Prx ***
17054896-TAC-T 14943016-TAC-T ***
16818883-G-GTA 14707003-G-GTA ***
26208003-AC-GG 24061856-AC-GG P1_Y1 ***
27409231-GCCTAA-CCCTGG 25263084-GCCTAA-CCCTGG P1_g3 ***
15971225-CTTTTT-C 13859345-CTTTTT-C 18×T***
58842266-ATCCC-TTCCA 56748601-GGGAT-TGGAA ***
58917636-CCCTTCCATTCCAATGAATTCNNN-C ***
58916668-CG-AT 56674202-CG-AT ***
58915512-A-AAAG 56675358-A-ACTT ***
58907501-ATTCCGTTCGATTCCC-A 56683335-TGGAAGGGAATCGAAC-T ***
58906340-ATTTT-GTTCA 56684527-AAAAT-TGAAC ***
58885636-GCATTC-G 56705205-AAATGG-A 5×CATTC***
58882411-TACATTCGATTTCTTG-T 56708444-ACAAGAAATCGAATGT-A ***
58859194-ATG-TTC 56731675-CAT-GAA ***
58847195-GTTTCG-CATTCC 56743671-CGAAAC-GGAATG ***
58843985-AATTCCATTCCATTCGATTTAGTTCGATTCTATTCACTTCCATTTCCATTCGATTCC-A 56746821-CAATGGAATGGAATCGAATGGAAATGGAAGTGAATAGAATCGAACTAAATCGAATGG-C ***
58842238-GCAG-CCAC 56748630-CTGC-GTGG ***
27816413-GAA-G 25670266-GAA-G P1_Y2 ***
58830817-CCCATGACATTC-TCTATGCGATTT 56760043-GAATGTCATGGG-AAATCGCATAGA ***
58819361-NGA-N ***
58819357-NNNNNG-N ***
58819356-NNNNNNG-N ***
58819346-N-NAT ***
28491345-A-ACACCCCCAAAAAAAG 26345198-A-ACACCCCCAAAAAAAG ***
28491339-A-AAAAAAACACCCCAAT 26345192-A-AAAAAAACACCCCAAT ***
28491337-A-AAAAAAACACCCCC 26345190-A-AAAAAAACACCCCC ***
28491336-A-ACCCCCCC 26345189-A-ACCCCCCC ***
27816419-ATTTCC-CTTTTA 25670272-ATTTCC-CTTTTA P1_Y2 ***
16692757-G-GAA 14580877-G-GAA 27×A***
14776923-CA-C 12664992-CA-C 15×A***
24636349-C-CT 22490202-C-CT P3_t2 17×T***
26477922-AAC-A 24331775-AAC-A P1_Y1 14×AC***
8776547-C-CCTCAGTTTTTTTTT 8908506-C-CCTCAGTTTTTTTTT 24×T***
8016938-C-CTTT 8148897-C-CTTT 25×T***
5905918-G-AA 6037877-G-AA ***
5088451-C-CTTT 5220410-C-CTTT 27×T***
4965185-T-TAAAAAA 5097144-T-TAAAAAA 20×A***
4076256-CAAAAAAAAAA-C 4208215-CAAAAAAAAAA-C 21×A***
3522968-TAA-T 3654927-TAA-T 24×A***
3350530-TTAAG-AAAAA 3482489-TTAAG-AAAAA ***
2805529-CAAAAAAAA-C 2937488-CAAAAAAAA-C 22×A***
2752725-CAAAAA-C 2884684-CAAAAA-C 18×A***
17694609-GA-G 15582729-GA-G 14×A***
9570189-CTT-C 9732580-CTT-C IR3_Prx ***
14394468-T-TA 12273764-T-TA 16×A***
13924970-C-CA 11804264-C-CA 20×A***
13485344-A-AT 11329668-A-AT ***
22499699-T-G 20337813-T-G DYZ19 ***
21614729-T-TA 19452843-T-TA 11×A***
15290954-AT-A 13179053-AT-A 17×T***
15012462-A-AT 12900550-A-AT 14×T***
13944051-CA-C 11823345-CA-C 22×A***
21940393-C-CA 19778507-C-CA 17×A***
14888076-C-CT 12776142-C-CT 17×T***
9541874-CTG-C 9704265-CTG-C IR3_Prx ***
9570196-GTTC-ATTT 9732587-GTTC-ATTT IR3_Prx ***
14471469-CTTTTTTT-C 12350738-CTTTTTTT-C 19×T***
13470345-CACCACA-AACCCCTG 11314669-CACCACA-AACCCCTG ***
14413210-C-CAACAAAA 12292507-C-CAACAAAA 23×A***
13811067-AGGAAT-A 11690361-AGGAAT-A 11×GGAAT***
13701139-CAAA-GAAT 11545463-CAAA-GAAT ***
13608647-CAAA-C 11452971-CAAA-C 27×A***
13607598-CA-C 11451922-CA-C 18×A***
13545355-AG-GA 11389679-AG-GA ***
13532875-CAAAA-C 11377199-CAAAA-C 13×A***
13532875-CA-C 11377199-CA-C 13×A***
13484485-GAAGAG-CAAGTT 11328809-GAAGAG-CAAGTT ***
13482823-TG-CA 11327147-TG-CA ***
13463630-TAGCAAGC-ATGAAAGG 11307954-TAGCAAGC-ATGAAAGG ***
9654084-GAA-G 9816475-GAA-G IR3_Prx 14×A***
13448633-GCATTCCATTCC-G 11292957-GCATTCCATTCC-G 13×CATTC***
13444976-GACTAC-AAATAT 11289300-GACTAC-AAATAT ***
13413781-GTAC-AT 11258105-GTAC-AT ***
13356629-GA-G 11200953-GA-G 11×A***
13267779-C-CCCCCCT 11112103-C-CCCCCCT ***
13258696-TCAGA-CCAGG 11103020-TCAGA-CCAGG ***
13140121-ACTCGCAC-A 10629607-ACTCGCAC-A ***
13110012-TT-CC 10599498-TT-CC ***
9961025-AT-GC 10123416-AT-GC ***
9682840-CATGT-AATGA 9845231-CATGT-AATGA IR3_Prx ***
9682821-TT-CA 9845212-TT-CA IR3_Prx ***
22723404-G-AA 20561518-G-AA 12×A***
22329951-T-G 20168065-T-G DYZ19 ***
22495727-T-A 20333841-T-A DYZ19 ***
22335607-T-G 20173721-T-G DYZ19 ***
22421839-GTT-TTG 20259953-GTT-TTG DYZ19 ***
58851915-T-C 56738956-A-G ***
13105515-A-T 10595001-A-T ***
13206784-C-CAAA 11051108-C-CAAA 14×A***
13867502-A-AAATGG 11746796-A-AAATGG 10×AATGG***
22354884-A-G 20192998-A-G DYZ19 ***
22292344-G-T 20130458-G-T DYZ19 ***
13253705-T-C 11098029-T-C ***
22367910-T-A 20206024-T-A DYZ19 ***
22235029-A-T 20073143-A-T DYZ19 ***
58914261-G-T 56676610-C-A ***
2950223-GTA-G 3082182-GTA-G 10×TA***
58876306-A-T 56714565-T-A ***
10034767-C-T 10197158-C-T ***
22344142-C-G 20182256-C-G DYZ19 ***
23317649-C-CTTTTTTT 21155763-C-CTTTTTTT 37×T***
58872240-C-T 56718631-G-A ***
58840427-G-A 56750444-C-T ***
58840425-T-C 56750446-A-G ***
22366503-C-G 20204617-C-G DYZ19 ***
22366499-A-T 20204613-A-T DYZ19 ***
58909152-A-G 56681719-T-C ***
13513955-A-G 11358279-A-G ***
5066184-C-CT 5198143-C-CT 22×T***
22223274-A-T 20061388-A-T DYZ19 ***
58872331-A-C 56718540-T-G ***
22329991-T-G 20168105-T-G DYZ19 ***
13207274-CT-C 11051598-CT-C 16×T***
13470315-G-A 11314639-G-A ***
13140115-CATTAA-C 10629601-CATTAA-C ***
10052666-CTC-ATT 10215057-CTC-ATT ***
13535657-A-G 11379981-A-G ***
13253190-C-T 11097514-C-T ***
22234756-A-C 20072870-A-C DYZ19 ***
9700780-C-CA 9863171-C-CA IR3_Prx 23×A***
19709167-G-T 17597287-G-T P5_Prx ***
4200055-CA-C 4332014-CA-C 23×A***
22481895-G-A 20320009-G-A DYZ19 ***
13579546-AAAAAAAAACAGAAACT-A 11423870-AAAAAAAAACAGAAACT-A ***
13485175-G-C 11329499-G-C ***
13486257-C-G 11330581-C-G ***
2729648-C-CTTTTT 2861607-C-CTTTTT 25×T***
13256206-G-A 11100530-G-A FGC29766 ***
13481812-A-G 11326136-A-G ***
13445362-CAAAAAAA-C 11289686-CAAAAAAA-C 15×A***
22342918-G-T 20181032-G-T DYZ19 ***
24836792-GA-G 22690645-GA-G P3_b2 ***
24836798-G-A 22690651-G-A P3_b2 ***
13108777-A-G 10598263-A-G ***
58819967-C-A 56770904-G-T ***
22457231-CT-C 20295345-CT-C DYZ19 ***
22366755-AGAGA-GGAGT 20204869-AGAGA-GGAGT DYZ19 ***
22341725-CTTT-TCTG 20179839-CTTT-TCTG DYZ19 ***
22113187-C-CAAAAAA 19951301-C-CAAAAAA 23×A***
20574944-G-T 18413058-G-T P5_Dst 19×T***
22768819-C-CT 20606933-C-CT 20×T***
13455719-T-TATTCC 11300043-T-TATTCC 10×ATTCC***
13701474-A-G 11545798-A-G 5×AATGG***
13479489-C-G 11323813-C-G ***
22232334-G-A 20070448-G-A DYZ19 ***
3214906-G-T 3346865-G-T ***
22358487-G-A 20196601-G-A DYZ19 ***
22421531-T-C 20259645-T-C DYZ19 ***
23484359-T-TTA 21322473-T-TTA 9×TA***
58908904-G-C 56681967-C-G ***
58847176-C-G 56743695-G-C ***
22504570-C-A 20342684-C-A DYZ19 ***
22502948-G-T 20341062-G-T DYZ19 ***
13470322-G-C 11314646-G-C ***
13470314-A-C 11314638-A-C ***
13470303-A-G 11314627-A-G ***
23801733-C-CAAAAAAA 21639847-C-CAAAAAAA 31×A***
19937580-G-A 17825700-G-A P5_Prx ***
22366513-T-C 20204627-T-C DYZ19 ***
22227755-T-A 20065869-T-A DYZ19 ***
22257036-A-G 20095150-A-G DYZ19 ***
22241419-C-A 20079533-C-A DYZ19 ***
22344742-A-C 20182856-A-C DYZ19 ***
13475632-G-A 11319956-G-A ***
22258181-G-A 20096295-G-A DYZ19 ***
22268478-A-ACC 20106592-A-ACC DYZ19 ***
4517054-G-GA 4649013-G-GA 15×A***
22335693-T-G 20173807-T-G DYZ19 ***
13411435-T-G 11255759-T-G ***
13470854-TT-CC 11315178-TT-CC ***
13419135-A-G 11263459-A-G ***
22309410-T-C 20147524-T-C DYZ19 ***
22365977-GGTGGCAGCA-TGTTACATAG 20204091-GGTGGCAGCA-TGTTACATAG DYZ19 ***
10016613-TG-CA 10179004-TG-CA ***
7270276-C-CTTTT 7402235-C-CTTTT 25×T***
27499513-T-A 25353366-T-A P1_Y2 ***
27499459-A-G 25353312-A-G P1_Y2 ***
22335714-A-C 20173828-A-C DYZ19 ***
22257118-C-G 20095232-C-G DYZ19 ***
22251571-G-C 20089685-G-C DYZ19 ***
22251567-T-C 20089681-T-C DYZ19 ***
22226585-G-C 20064699-G-C DYZ19 ***
13448853-ACAG-CCAT 11293177-ACAG-CCAT ***
22358762-T-C 20196876-T-C DYZ19 ***
22491885-T-A 20329999-T-A DYZ19 ***
13720045-G-A 11564369-G-A ***
16074807-C-T 13962927-C-T ***
16074806-A-T 13962926-A-T ***
13747577-C-G 11591901-C-G ***
13747575-C-A 11591899-C-A ***
13747568-T-G 11591892-T-G ***
13735105-A-T 11579429-A-T ***
13733903-A-T 11578227-A-T ***
13728425-G-A 11572749-G-A ***
13720063-A-G 11564387-A-G ***
13702975-A-G 11547299-A-G ***
19488177-G-A 17376297-G-A ***
13702971-C-G 11547295-C-G ***
13702960-C-G 11547284-C-G ***
13567097-G-A 11411421-G-A ***
13567075-T-G 11411399-T-G ***
13473597-G-A 11317921-G-A ***
13470362-C-T 11314686-C-T ***
13463646-T-C 11307970-T-C ***
13328810-C-T 11173134-C-T ***
13263792-G-C 11108116-G-C ***
13253855-C-T 11098179-C-T ***
18353560-G-A 16241680-G-A P6_Prx ***
19716455-C-T 17604575-C-T P5_Prx ***
13126325-C-G 10615811-C-G ***
13143720-TATTCC-T 10633206-TATTCC-T 11×ATTCC***
22421838-G-A 20259952-G-A DYZ19 ***
22421708-T-C 20259822-T-C DYZ19 ***
22367093-A-C 20205207-A-C DYZ19 ***
22364857-C-A 20202971-C-A DYZ19 ***
22364782-C-A 20202896-C-A DYZ19 ***
22361061-G-A 20199175-G-A DYZ19 ***
22342917-A-C 20181031-A-C DYZ19 ***
22342868-G-A 20180982-G-A DYZ19 ***
22337096-G-C 20175210-G-C DYZ19 ***
22329960-A-T 20168074-A-T DYZ19 ***
22326193-A-G 20164307-A-G DYZ19 ***
19716456-A-T 17604576-A-T P5_Prx ***
22310097-G-A 20148211-G-A DYZ19 ***
22309099-G-T 20147213-G-T DYZ19 ***
22309083-G-C 20147197-G-C DYZ19 ***
22248147-C-G 20086261-C-G DYZ19 ***
22232455-G-A 20070569-G-A DYZ19 ***
22232454-C-A 20070568-C-A DYZ19 ***
22226691-C-A 20064805-C-A DYZ19 ***
20711199-A-C 18549313-A-C P4_Prx ***
20409169-C-G 18247283-C-G P5_Dst ***
19948129-C-G 17836249-C-G P5_Prx ***
13126350-G-A 10615836-G-A ***
13126268-A-T 10615754-A-T ***
58874431-G-T 56716440-C-A ***
13485289-G-C 11329613-G-C ***
22226693-T-C 20064807-T-C DYZ19 ***
13126339-G-C 10615825-G-C ***
58874441-A-T 56716430-T-A ***
22268259-T-A 20106373-T-A DYZ19 ***
58870586-TAATTCGAG-T 56720276-GCTCGAATT-G ***
22332559-T-A 20170673-T-A DYZ19 ***
22257020-G-A 20095134-G-A DYZ19 ***
13482611-G-C 11326935-G-C ***
13129599-C-A 10619085-C-A ***
13485262-T-G 11329586-T-G ***
13486249-A-C 11330573-A-C ***
28806347-C-G 26660200-C-G ***
13940857-A-AAG 11820151-A-AAG 18×AG***
13720065-G-A 11564389-G-A ***
13720057-T-G 11564381-T-G ***
13720055-G-A 11564379-G-A ***
24235387-G-GTTTTT 22089240-G-GTTTTT P3_b1 29×T***
13481513-GC-TG 11325837-GC-TG ***
58819359-NNNGA-N ***
22263779-GGTGT-AGTGG 20101893-GGTGT-AGTGG DYZ19 ***
10019059-AAGGGGGTA-GAGGTGGTG 10181450-AAGGGGGTA-GAGGTGGTG ***
22289475-AC-GG 20127589-AC-GG DYZ19 ***
4071991-AAC-A 4203950-AAC-A 14×AC***
13115312-G-T 10604798-G-T ***
13481955-A-T 11326279-A-T ***
13110033-T-G 10599519-T-G ***
9682834-G-A 9845225-G-A IR3_Prx ***
9570199-C-T 9732590-C-T IR3_Prx ***
9340432-A-C 9502823-A-C ***
6483166-C-T 6615125-C-T ***
6339097-G-C 6471056-G-C IR3_Dst ***
5843839-C-T 5975798-C-T ***
5106951-A-C 5238910-A-C ***
5106939-T-G 5238898-T-G ***
4820800-C-T 4952759-C-T ***
58903377-G-C 56687494-C-G ***
22703626-GAAAGAAAG-AAAAAAAAA 20541740-GAAAGAAAG-AAAAAAAAA ***
24562496-T-A 22416349-T-A P3_t2 ***
22268246-G-T 20106360-G-T DYZ19 ***
13485263-T-G 11329587-T-G ***
13253235-C-T 11097559-C-T ***
6503051-A-G 6635010-A-G ***
28336668-C-CAAAAAAA 26190521-C-CAAAAAAA P1_b4 31×A***
6191304-CA-C 6323263-CA-C IR3_Dst 15×A***
28542416-CA-C 26396269-CA-C 17×A***
58877025-T-C 56713846-A-G ***
22227756-T-G 20065870-T-G DYZ19 ***
59027472-T-TA 56881325-T-TA 11×A***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Haplotype Progression

The data below reveals the progression of changes in the haplotype. The bottom row is the haplotype for this man and above him are the inferred ancestral haplotypes for various upstream blocks. These inferred haplotypes are very much a work in progress, and any suggested modifications are appreciated. I think we can use our vast collection of haplotype data to refine these haplotypes. Mutations made from each upstream block are shown in sequence. The cell color is determined by the block in which the mutation took place.

DYS393
DYS390
DYS19
DYS391
DYS385
DYS426
DYS388
DYS439
DYS389i
DYS392
DYS389ii
DYS458
DYS459
DYS455
DYS454
DYS447
DYS437
DYS448
DYS449
DYS464
DYS460
Y-GATA-H4
YCAII
DYS456
DYS607
DYS576
DYS570
CDY
DYS442
DYS438
DYS531
DYS578
DYF395S1
DYS590
DYS537
DYS641
DYS472
DYF406S1
DYS511
DYS425
DYS413
DYS557
DYS594
DYS436
DYS490
DYS534
DYS450
DYS444
DYS481
DYS520
DYS446
DYS617
DYS568
DYS487
DYS572
DYS640
DYS492
DYS565
DYS710
DYS485
DYS632
DYS495
DYS540
DYS714
DYS716
DYS717
DYS505
DYS556
DYS549
DYS589
DYS522
DYS494
DYS533
DYS636
DYS575
DYS638
DYS462
DYS452
DYS445
Y-GATA-A10
DYS463
DYS441
Y-GGAAT-1B07
DYS525
DYS712
DYS593
DYS650
DYS532
DYS715
DYS504
DYS513
DYS561
DYS552
DYS726
DYS635
DYS587
DYS643
DYS497
DYS510
DYS434
DYS461
DYS435
P312/S1161324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123315916122626191211131210912121011113012132413101020151913241712152412231810141791211
L21/S1451324141111-14121212131329179-1011112515192915-15-17-17111119-231615181736-38121211915-1681010810101223-231610121215812222013121113111112123515916122526191211131211912121011113012132413101020151913241712152412231810141791211
Berry1325141111-13121212131429179-1011112615183015-17-17-17111119-231616181938-39121211915-1681010810101221-231610121216812252013121113111112123815916122426191212121211913121011113012122413101024151913241713152413231810141791211

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: SUV4X*16000000100000008300000
Used in age calculations16000000100000008300000
Counts of SNPs85
Variant counts last updated 2017-09-19 23:23:19.

* BED data not available. Using default values.


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